ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7e08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ515477.2|TAE515477 Triticum aestivum erebp gene for ethylene response element binding protein Length = 1451 Score = 987 bits (498), Expect = 0.0 Identities = 604/640 (94%), Gaps = 6/640 (0%) Strand = Plus / Plus Query: 1 ctcctatggcttctcagcaacgctgccctgagcctaccgctgtgaaggtgcctgagttca 60 ||||||||||| |||||||||||||| || || |||||||||||||| ||||||| Sbjct: 545 ctcctatggctcctcagcaacgctgcgct------actgctgtgaaggtgcccgagttca 598 Query: 61 acaccgaacagaagccggtactcaataccatgggcaatgcagatgtgtattcctgcgctg 120 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct: 599 acaccgaacagaagccggtactcaacaccatgggcaacgcagatgtgtattcctgctctg 658 Query: 121 ctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgccta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 659 ctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgtttgtgccta 718 Query: 181 ccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaactcct 240 | |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 719 cagtgaatgcagttgaggcccctttcatgaatttttcctctgaccagggtagcaactcct 778 Query: 241 ttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctgtgc 300 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 779 ttagttgctcagacttcagctgggagaatgatatcaagacccctgacataacttctgtgc 838 Query: 301 ttgcatccattcccacctcgacagaggtcaatgaatctgcatttgtccagaacaatggca 360 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 839 ttgcatccattcccacctcaacagaggtcaatgaatctgcatttctccagaacaatggca 898 Query: 361 gtaattcaacggcacctcctgtgatgggtaatgccaatgttgatcttgccgacttggagc 420 |||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 899 tcaattcaacggtacctcctgtgatgggtgatgctaatgttgatcttgccgacttggagc 958 Query: 421 catacatgaagttcctgatggacgatcgttcagatgagtcaattgacagcattctaagct 480 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 959 catacatgaagttcctgatggacgatggttcagatgagtcaattgacagcattctaagct 1018 Query: 481 gtgatgtgccccaggatgtggtcggcaacatggacctgtggacctttgatgacatgccct 540 ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 1019 gtgatgtaccccaggatgtggtcggcaacatgggcctttggacctttgatgacatgccct 1078 Query: 541 tgtctgctggtttctactgagggaattgaggttgctgggtgcctgtatatatagacaaag 600 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 1079 tgtctgctggtttctactgagggaatcgaggtcgctgggtgcctgtatatatagacaaag 1138 Query: 601 ggaataagtattctggacatcaacaagtgcttgngtctgg 640 ||||||||||||| ||||||||||||||||||| |||||| Sbjct: 1139 ggaataagtattcaggacatcaacaagtgcttgtgtctgg 1178
>gb|AF542184.1| Triticum aestivum EREBP transcription factor mRNA, complete cds Length = 1475 Score = 971 bits (490), Expect = 0.0 Identities = 603/640 (94%), Gaps = 7/640 (1%) Strand = Plus / Plus Query: 1 ctcctatggcttctcagcaacgctgccctgagcctaccgctgtgaaggtgcctgagttca 60 ||||||||||| |||||||||||||| || || |||||||||||||| ||||||| Sbjct: 636 ctcctatggctcctcagcaacgctgcgct------actgctgtgaaggtgcccgagttca 689 Query: 61 acaccgaacagaagccggtactcaataccatgggcaatgcagatgtgtattcctgcgctg 120 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct: 690 acaccgaacagaagccggtactcaacaccatgggcaacgcagatgtgtattcctgctctg 749 Query: 121 ctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgccta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 750 ctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgtttgtgccta 809 Query: 181 ccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaactcct 240 | |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 810 cagtgaatgcagttgaggcccctttcatgaatttttcctctgaccagggtagcaactcct 869 Query: 241 ttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctgtgc 300 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 870 ttagttgctcagacttcagctgggagaatgatatcaagacccctgacataacttctgtgc 929 Query: 301 ttgcatccattcccacctcgacagaggtcaatgaatctgcatttgtccagaacaatggca 360 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 930 ttgcatccattcccacctcaacagaggtcaatgaatctgcatttctccagaacaatggca 989 Query: 361 gtaattcaacggcacctcctgtgatgggtaatgccaatgttgatcttgccgacttggagc 420 |||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 990 tcaattcaacggtacctcctgtgatgggtgatgctaatgttgatcttgccgacttggagc 1049 Query: 421 catacatgaagttcctgatggacgatcgttcagatgagtcaattgacagcattctaagct 480 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1050 catacatgaagttcctgatggacgatggttcagatgagtcaattgacagcattctaagct 1109 Query: 481 gtgatgtgccccaggatgtggtcggcaacatggacctgtggacctttgatgacatgccct 540 ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 1110 gtgatgtaccccaggatgtggtcggcaacatgggcctttggacctttgatgacatgccct 1169 Query: 541 tgtctgctggtttctactgagggaattgaggttgctgggtgcctgtatatatagacaaag 600 |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1170 tgtctgctggtttctactgagggaatcgaggtcgctgggtgcctgtatatatagacaaa- 1228 Query: 601 ggaataagtattctggacatcaacaagtgcttgngtctgg 640 ||||||||||||| ||||||||||||||||||| |||||| Sbjct: 1229 ggaataagtattcaggacatcaacaagtgcttgtgtctgg 1268
>gb|AY781352.1| Triticum aestivum ethylene-responsive element binding protein 1 (EREB1) mRNA, complete cds Length = 1403 Score = 952 bits (480), Expect = 0.0 Identities = 576/607 (94%), Gaps = 1/607 (0%) Strand = Plus / Plus Query: 34 ctaccgctgtgaaggtgcctgagttcaacaccgaacagaagccggtactcaataccatgg 93 ||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 574 ctacctctgtgaaggtgcccgagttcaacaccgaacagaagccagtactcaacaccatgg 633 Query: 94 gcaatgcagatgtgtattcctgcgctgctgttgactacaccttaaatcagcaatttgtgc 153 |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 634 gcaacacagatgtgtattcctgccctgctgttgactacaccttaaatcagcaatttgtgc 693 Query: 154 agcctcagaacatgtcgttcgtgcctaccatgaatgcagttgaggctcctttcatgaatt 213 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 694 agcctcagaacatgtcgtttgtgcctacagtgaatgcagttgaggctcctttcatgaatt 753 Query: 214 tttcctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgata 273 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 754 tttcctctgaccaggggagcaactcctttagttgctcagacttcagctgggagaatgata 813 Query: 274 tcaagacccctgacataacatctgtgcttgcatccattcccacctcgacagaggtcaatg 333 ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct: 814 tcaagacccctgacataacttctgtgcttgcatccattcccacctcaactgaggtcaatg 873 Query: 334 aatctgcatttgtccagaacaatggcagtaattcaacggcacctcctgtgatgggtaatg 393 ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| Sbjct: 874 aatctgcatttctccagaacaatggcattaattcaacggtacctcctgtgatgggtgatg 933 Query: 394 ccaatgttgatcttgccgacttggagccatacatgaagttcctgatggacgatcgttcag 453 | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 934 ctaatgttgatcttgccgacttggagccatacatgaagttcctgatggacgatggttcag 993 Query: 454 atgagtcaattgacagcattctaagctgtgatgtgccccaggatgtggtcggcaacatgg 513 |||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 994 atgagtcaattgacagcattctaagctgtgatgtaccgcaggacgttgtcggcaacatgg 1053 Query: 514 acctgtggacctttgatgacatgcccttgtctgctggtttctactgagggaattgaggtt 573 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1054 gcctttggacctttgatgacatgcccttgtctgctggtttctactgagggaatcgaggtc 1113 Query: 574 gctgggtgcctgtatatatagacaaagggaataagtattctggacatcaacaagtgcttg 633 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1114 gctgggtgcctgtatatatagacaaa-ggaataagtattctggacatcaacaagtgcttg 1172 Query: 634 ngtctgg 640 |||||| Sbjct: 1173 tgtctgg 1179
>gb|AY271984.1| Triticum aestivum ethylene-responsive element binding protein (TaERF1) mRNA, complete cds Length = 999 Score = 850 bits (429), Expect = 0.0 Identities = 527/560 (94%), Gaps = 6/560 (1%) Strand = Plus / Plus Query: 1 ctcctatggcttctcagcaacgctgccctgagcctaccgctgtgaaggtgcctgagttca 60 ||||||||||| |||||||||||||| || || |||||||||||||| ||||||| Sbjct: 446 ctcctatggctcctcagcaacgctgcgct------actgctgtgaaggtgcccgagttca 499 Query: 61 acaccgaacagaagccggtactcaataccatgggcaatgcagatgtgtattcctgcgctg 120 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct: 500 acaccgaacagaagccggtactcaacaccatgggcaacgcagatgtgtattcctgctctg 559 Query: 121 ctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgccta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 560 ctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgtttgtgccta 619 Query: 181 ccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaactcct 240 | |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 620 cagtgaatgcagttgaggcccctttcatgaatttttcctctgaccagggtagcaactcct 679 Query: 241 ttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctgtgc 300 |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 680 ttagttgctcagacctcagctgggagaatgatatcaagacccctgacataacttctgtgc 739 Query: 301 ttgcatccattcccacctcgacagaggtcaatgaatctgcatttgtccagaacaatggca 360 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 740 ttgcatccattcccacctcaacagaggtcaatgaatctgcatttctccagaacaatggca 799 Query: 361 gtaattcaacggcacctcctgtgatgggtaatgccaatgttgatcttgccgacttggagc 420 |||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 800 tcaattcaacggtacctcctgtgatgggtgatgctaatgttgatcttgccgacttggagc 859 Query: 421 catacatgaagttcctgatggacgatcgttcagatgagtcaattgacagcattctaagct 480 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 860 catacatgaagttcctgatggacgatggttcagatgagtcaattgacagcattctaagct 919 Query: 481 gtgatgtgccccaggatgtggtcggcaacatggacctgtggacctttgatgacatgccct 540 ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 920 gtgatgtaccccaggatgtggtcggcaacatgggcctttggacctttgatgacatgccct 979 Query: 541 tgtctgctggtttctactga 560 |||||||||||||||||||| Sbjct: 980 tgtctgctggtttctactga 999
>gb|AY271985.1| Triticum aestivum ethylene-responsive element binding protein (TaERF2) mRNA, complete cds Length = 1068 Score = 823 bits (415), Expect = 0.0 Identities = 499/527 (94%) Strand = Plus / Plus Query: 34 ctaccgctgtgaaggtgcctgagttcaacaccgaacagaagccggtactcaataccatgg 93 ||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 542 ctacctctgtgaaggtgcccgagttcaacaccgaacagaagccagtactcaacaccatgg 601 Query: 94 gcaatgcagatgtgtattcctgcgctgctgttgactacaccttaaatcagcaatttgtgc 153 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 602 gcaacgcagatgtgtattcctgccctgctgttgactacaccttaaatcagcaatttgtgc 661 Query: 154 agcctcagaacatgtcgttcgtgcctaccatgaatgcagttgaggctcctttcatgaatt 213 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 662 agcctcagaacatgtcgtttgtgcctacagtgaatgcagttgaggctcctttcatgaatt 721 Query: 214 tttcctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgata 273 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 722 tttcctctgaccaggggagcaactcctttagttgctcagacttcagctgggagaatgata 781 Query: 274 tcaagacccctgacataacatctgtgcttgcatccattcccacctcgacagaggtcaatg 333 ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct: 782 tcaagacccctgacataacttctgtgcttgcatccattcccacctcaactgaggtcaatg 841 Query: 334 aatctgcatttgtccagaacaatggcagtaattcaacggcacctcctgtgatgggtaatg 393 ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| Sbjct: 842 aatctgcatttctccagaacaatggcattaattcaacggtacctcctgtgatgggtgatg 901 Query: 394 ccaatgttgatcttgccgacttggagccatacatgaagttcctgatggacgatcgttcag 453 | ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||| Sbjct: 902 ctaatgttgatcttgcctacttggagccgtacatgaagttcctgatggacgatggttcag 961 Query: 454 atgagtcaattgacagcattctaagctgtgatgtgccccaggatgtggtcggcaacatgg 513 |||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 962 atgagtcaattgacagcattctaagctgtgatgtaccgcaggacgttgtcggcaacatgg 1021 Query: 514 acctgtggacctttgatgacatgcccttgtctgctggtttctactga 560 ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 gcctttggacctttgatgacatgcccttgtctgctggtttctactga 1068
>gb|AY781361.1| Triticum aestivum DREB transcription factor 6 (DREB6) mRNA, complete cds Length = 1525 Score = 383 bits (193), Expect = e-103 Identities = 230/240 (95%), Gaps = 2/240 (0%) Strand = Plus / Minus Query: 401 tgatcttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatgagtc 460 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1515 tgatcttgccgacttggagccatacatgaagttcctgatggacgatggttcagatgagtc 1456 Query: 461 aattgacagcattctaagctgtgatgtgccccaggatgtggtcggcaacatggacctgtg 520 ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| || Sbjct: 1455 aattgacagcattctaagctgtgatgtaccccaggatgtggtcggc-acatgggcctttg 1397 Query: 521 gacctttgatgacatgcccttgtctgctggtttctactgagggaattgaggttgctgggt 580 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1396 gacctttgatgacatgcccttgtctgctggtttctactgagggaatcgaggtcgctgggt 1337 Query: 581 gcctgtatatatagacaaagggaataagtattctggacatcaacaagtgcttgngtctgg 640 ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| Sbjct: 1336 gcctgtatatatagacaaa-ggaataagtattcaggacatcaacaagtgcttgtgtctgg 1278
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Plus Query: 118 ctgctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgc 177 |||||||||| ||||||||| | ||| |||||||||| |||||| | || || || | Sbjct: 4743700 ctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttc 4743759 Query: 178 ctaccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaact 237 || | ||||| || |||||| | ||||| |||| | ||||||||||| |||||||||| Sbjct: 4743760 ctgcaatgaacgcgattgaggatactttcgtgaacctgtcctctgatcaagggagcaact 4743819 Query: 238 cctttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctg 297 ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct: 4743820 cctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttcca 4743879 Query: 298 tgcttgca 305 |||||||| Sbjct: 4743880 tgcttgca 4743887 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Plus Query: 346 tccagaacaatggcagtaattcaacggcacctcctgtgatgggtaatgccaatgttgatc 405 |||||||||||| |||| || ||| || ||||||||||||||| ||||| | |||||| Sbjct: 4743922 tccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatc 4743981 Query: 406 ttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatgagtcaattg 465 |||| ||| ||||||| |||||||| || ||||| || | | |||| |||||||| |||| Sbjct: 4743982 ttgctgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattg 4744041 Query: 466 acagcattctaagctgtgatgtgccccaggatgtggtcggcaacatggacctgtggacct 525 ||| | |||| |||| ||||| | |||||||||| | | | ||||||||| |||| || Sbjct: 4744042 acacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagct 4744101 Query: 526 ttgatgacatgcccttgtctgctggtttctactgaggg 563 | |||||||||||| |||| || | |||||||||||| Sbjct: 4744102 tcgatgacatgcccgtgtcggccgagttctactgaggg 4744139
>dbj|AP004280.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0648E08 Length = 135175 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Plus Query: 118 ctgctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgc 177 |||||||||| ||||||||| | ||| |||||||||| |||||| | || || || | Sbjct: 19104 ctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttc 19163 Query: 178 ctaccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaact 237 || | ||||| || |||||| | ||||| |||| | ||||||||||| |||||||||| Sbjct: 19164 ctgcaatgaacgcgattgaggatactttcgtgaacctgtcctctgatcaagggagcaact 19223 Query: 238 cctttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctg 297 ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct: 19224 cctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttcca 19283 Query: 298 tgcttgca 305 |||||||| Sbjct: 19284 tgcttgca 19291 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Plus Query: 346 tccagaacaatggcagtaattcaacggcacctcctgtgatgggtaatgccaatgttgatc 405 |||||||||||| |||| || ||| || ||||||||||||||| ||||| | |||||| Sbjct: 19326 tccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatc 19385 Query: 406 ttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatgagtcaattg 465 |||| ||| ||||||| |||||||| || ||||| || | | |||| |||||||| |||| Sbjct: 19386 ttgctgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattg 19445 Query: 466 acagcattctaagctgtgatgtgccccaggatgtggtcggcaacatggacctgtggacct 525 ||| | |||| |||| ||||| | |||||||||| | | | ||||||||| |||| || Sbjct: 19446 acacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagct 19505 Query: 526 ttgatgacatgcccttgtctgctggtttctactgaggg 563 | |||||||||||| |||| || | |||||||||||| Sbjct: 19506 tcgatgacatgcccgtgtcggccgagttctactgaggg 19543
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Plus Query: 118 ctgctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgc 177 |||||||||| ||||||||| | ||| |||||||||| |||||| | || || || | Sbjct: 106299 ctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttc 106358 Query: 178 ctaccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaact 237 || | ||||| || |||||| | ||||| |||| | ||||||||||| |||||||||| Sbjct: 106359 ctgcaatgaacgcgattgaggatactttcgtgaacctgtcctctgatcaagggagcaact 106418 Query: 238 cctttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctg 297 ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct: 106419 cctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttcca 106478 Query: 298 tgcttgca 305 |||||||| Sbjct: 106479 tgcttgca 106486 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Plus Query: 346 tccagaacaatggcagtaattcaacggcacctcctgtgatgggtaatgccaatgttgatc 405 |||||||||||| |||| || ||| || ||||||||||||||| ||||| | |||||| Sbjct: 106521 tccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatc 106580 Query: 406 ttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatgagtcaattg 465 |||| ||| ||||||| |||||||| || ||||| || | | |||| |||||||| |||| Sbjct: 106581 ttgctgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattg 106640 Query: 466 acagcattctaagctgtgatgtgccccaggatgtggtcggcaacatggacctgtggacct 525 ||| | |||| |||| ||||| | |||||||||| | | | ||||||||| |||| || Sbjct: 106641 acacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagct 106700 Query: 526 ttgatgacatgcccttgtctgctggtttctactgaggg 563 | |||||||||||| |||| || | |||||||||||| Sbjct: 106701 tcgatgacatgcccgtgtcggccgagttctactgaggg 106738
>dbj|AK100167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022F20, full insert sequence Length = 2445 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Plus Query: 118 ctgctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgc 177 |||||||||| ||||||||| | ||| |||||||||| |||||| | || || || | Sbjct: 774 ctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttc 833 Query: 178 ctaccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaact 237 || | ||||| || |||||| | ||||| |||| | ||||||||||| |||||||||| Sbjct: 834 ctgcaatgaacgcgattgaggatactttcgtgaacctgtcctctgatcaagggagcaact 893 Query: 238 cctttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctg 297 ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct: 894 cctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttcca 953 Query: 298 tgcttgca 305 |||||||| Sbjct: 954 tgcttgca 961
>dbj|AK069833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031B06, full insert sequence Length = 1677 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Plus Query: 118 ctgctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgc 177 |||||||||| ||||||||| | ||| |||||||||| |||||| | || || || | Sbjct: 734 ctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttc 793 Query: 178 ctaccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaact 237 || | ||||| || |||||| | ||||| |||| | ||||||||||| |||||||||| Sbjct: 794 ctgcaatgaacgcgattgaggatactttcgtgaacctgtcctctgatcaagggagcaact 853 Query: 238 cctttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctg 297 ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct: 854 cctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttcca 913 Query: 298 tgcttgca 305 |||||||| Sbjct: 914 tgcttgca 921 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Plus Query: 346 tccagaacaatggcagtaattcaacggcacctcctgtgatgggtaatgccaatgttgatc 405 |||||||||||| |||| || ||| || ||||||||||||||| ||||| | |||||| Sbjct: 956 tccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatc 1015 Query: 406 ttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatgagtcaattg 465 |||| ||| ||||||| |||||||| || ||||| || | | |||| |||||||| |||| Sbjct: 1016 ttgctgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattg 1075 Query: 466 acagcattctaagctgtgatgtgccccaggatgtggtcggcaacatggacctgtggacct 525 ||| | |||| |||| ||||| | |||||||||| | | | ||||||||| |||| || Sbjct: 1076 acacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagct 1135 Query: 526 ttgatgacatgcccttgtctgctggtttctactgaggg 563 | |||||||||||| |||| || | |||||||||||| Sbjct: 1136 tcgatgacatgcccgtgtcggccgagttctactgaggg 1173 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/46 (89%), Gaps = 2/46 (4%) Strand = Plus / Plus Query: 578 ggtgcctgtatatata--gacaaagggaataagtattctggacatc 621 |||||||||||||||| |||||| ||||||| |||||||||||| Sbjct: 1192 ggtgcctgtatatataaggacaaatggaataaacattctggacatc 1237
>gb|AF190770.1|AF190770 Oryza sativa EREBP-like protein (tsh1) mRNA, complete cds Length = 1597 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Plus Query: 118 ctgctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgc 177 |||||||||| ||||||||| | ||| |||||||||| |||||| | || || || | Sbjct: 747 ctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttc 806 Query: 178 ctaccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaact 237 || | ||||| || |||||| | ||||| |||| | ||||||||||| |||||||||| Sbjct: 807 ctgcaatgaacgcgattgaggatactttcgtgaacctgtcctctgatcaagggagcaact 866 Query: 238 cctttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctg 297 ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct: 867 cctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttcca 926 Query: 298 tgcttgca 305 |||||||| Sbjct: 927 tgcttgca 934 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Plus Query: 346 tccagaacaatggcagtaattcaacggcacctcctgtgatgggtaatgccaatgttgatc 405 |||||||||||| |||| || ||| || ||||||||||||||| ||||| | |||||| Sbjct: 969 tccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatc 1028 Query: 406 ttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatgagtcaattg 465 |||| ||| ||||||| |||||||| || ||||| || | | |||| |||||||| |||| Sbjct: 1029 ttgctgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattg 1088 Query: 466 acagcattctaagctgtgatgtgccccaggatgtggtcggcaacatggacctgtggacct 525 ||| | |||| |||| ||||| | |||||||||| | | | ||||||||| |||| || Sbjct: 1089 acacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagct 1148 Query: 526 ttgatgacatgcccttgtctgctggtttctactgaggg 563 | |||||||||||| |||| || | |||||||||||| Sbjct: 1149 tcgatgacatgcccgtgtcggccgagttctactgaggg 1186 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/46 (89%), Gaps = 2/46 (4%) Strand = Plus / Plus Query: 578 ggtgcctgtatatata--gacaaagggaataagtattctggacatc 621 |||||||||||||||| |||||| ||||||| |||||||||||| Sbjct: 1205 ggtgcctgtatatataaggacaaatggaataaacattctggacatc 1250
>dbj|AK060742.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E01, full insert sequence Length = 1591 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Plus Query: 118 ctgctgttgactacaccttaaatcagcaatttgtgcagcctcagaacatgtcgttcgtgc 177 |||||||||| ||||||||| | ||| |||||||||| |||||| | || || || | Sbjct: 773 ctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttc 832 Query: 178 ctaccatgaatgcagttgaggctcctttcatgaatttttcctctgatcaggggagcaact 237 || | ||||| || |||||| | ||||| |||| | ||||||||||| |||||||||| Sbjct: 833 ctgcaatgaacgcgattgaggatactttcgtgaacctgtcctctgatcaagggagcaact 892 Query: 238 cctttagttgctcagactttagctgggagaatgatatcaagacccctgacataacatctg 297 ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct: 893 cctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttcca 952 Query: 298 tgcttgca 305 |||||||| Sbjct: 953 tgcttgca 960 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Plus Query: 346 tccagaacaatggcagtaattcaacggcacctcctgtgatgggtaatgccaatgttgatc 405 |||||||||||| |||| || ||| || ||||||||||||||| ||||| | |||||| Sbjct: 995 tccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatc 1054 Query: 406 ttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatgagtcaattg 465 |||| ||| ||||||| |||||||| || ||||| || | | |||| |||||||| |||| Sbjct: 1055 ttgctgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattg 1114 Query: 466 acagcattctaagctgtgatgtgccccaggatgtggtcggcaacatggacctgtggacct 525 ||| | |||| |||| ||||| | |||||||||| | | | ||||||||| |||| || Sbjct: 1115 acacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagct 1174 Query: 526 ttgatgacatgcccttgtctgctggtttctactgaggg 563 | |||||||||||| |||| || | |||||||||||| Sbjct: 1175 tcgatgacatgcccgtgtcggccgagttctactgaggg 1212 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/46 (89%), Gaps = 2/46 (4%) Strand = Plus / Plus Query: 578 ggtgcctgtatatata--gacaaagggaataagtattctggacatc 621 |||||||||||||||| |||||| ||||||| |||||||||||| Sbjct: 1231 ggtgcctgtatatataaggacaaatggaataaacattctggacatc 1276
>gb|BT018826.1| Zea mays clone EL01N0551B03.d mRNA sequence Length = 1835 Score = 103 bits (52), Expect = 7e-19 Identities = 140/168 (83%), Gaps = 6/168 (3%) Strand = Plus / Plus Query: 398 tgttgatcttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatga 457 ||||||||| ||||| |||||||| || ||||| ||||||||||||| | ||||||| || Sbjct: 1115 tgttgatctcgccgagttggagccgtatatgaatttcctgatggacggtggttcagacga 1174 Query: 458 gtcaattgacagcattcta---agctgtgatgtgccccaggatgtggtcggcaacatgga 514 || || ||||| ||| |||||||||| ||||||| |||||| |||||||||| Sbjct: 1175 ctcgat---cagcactctcttgagctgtgatggatcccaggacgtggtcagcaacatgga 1231 Query: 515 cctgtggacctttgatgacatgcccttgtctgctggtttctactgagg 562 ||| |||| ||| || ||||||||| |||||||||||||||||||||| Sbjct: 1232 cctttggagcttcgaggacatgcccatgtctgctggtttctactgagg 1279
>gb|AY103951.1| Zea mays PCO106933 mRNA sequence Length = 2052 Score = 103 bits (52), Expect = 7e-19 Identities = 140/168 (83%), Gaps = 6/168 (3%) Strand = Plus / Plus Query: 398 tgttgatcttgccgacttggagccatacatgaagttcctgatggacgatcgttcagatga 457 ||||||||| ||||| |||||||| || ||||| ||||||||||||| | ||||||| || Sbjct: 1111 tgttgatctcgccgagttggagccgtatatgaatttcctgatggacggtggttcagacga 1170 Query: 458 gtcaattgacagcattcta---agctgtgatgtgccccaggatgtggtcggcaacatgga 514 || || ||||| ||| |||||||||| ||||||| |||||| |||||||||| Sbjct: 1171 ctcgat---cagcactctcttgagctgtgatggatcccaggacgtggtcagcaacatgga 1227 Query: 515 cctgtggacctttgatgacatgcccttgtctgctggtttctactgagg 562 ||| |||| ||| || ||||||||| |||||||||||||||||||||| Sbjct: 1228 cctttggagcttcgaggacatgcccatgtctgctggtttctactgagg 1275
>gb|AY581836.1| Cynodon dactylon putative transcription factor EREBP1 mRNA, partial cds Length = 330 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgcccttgtctgctggt 551 |||||||| ||| ||||||||||||| |||| |||||||||||||||| | |||| || | Sbjct: 29 caggatgtagtcagcaacatggacctctggagctttgatgacatgcccatttctggtgat 88 Query: 552 ttctactgagg 562 ||||| ||||| Sbjct: 89 ttctattgagg 99
>ref|XM_468125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1484 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1101 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 1148 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 833 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 892 Query: 278 gac 280 ||| Sbjct: 893 gac 895
>ref|XM_507539.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1311_D08.9 mRNA Length = 1585 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1194 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 1241 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 926 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 985 Query: 278 gac 280 ||| Sbjct: 986 gac 988
>ref|XM_507538.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1311_D08.9 mRNA Length = 1687 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1196 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 1243 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 928 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 987 Query: 278 gac 280 ||| Sbjct: 988 gac 990
>ref|XM_507013.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1311_D08.9 mRNA Length = 1602 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1098 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 1145 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 830 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 889 Query: 278 gac 280 ||| Sbjct: 890 gac 892
>gb|AF193803.1| Oryza sativa transcription factor EREBP1 mRNA, complete cds Length = 1612 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1129 caggatgttgtcagcaacatggacctatggagctttgatgacatgccc 1176 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | || || |||||| ||||||||||||||| ||| Sbjct: 861 ctctgaacagggaagcaactcatttggctgttctgactttggctgggagaatgataccaa 920 Query: 278 gac 280 ||| Sbjct: 921 gac 923
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 33218882 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 33218835 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 33219150 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 33219091 Query: 278 gac 280 ||| Sbjct: 33219090 gac 33219088
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 48191 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 48144 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 48459 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 48400 Query: 278 gac 280 ||| Sbjct: 48399 gac 48397
>dbj|AK119885.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-H02, full insert sequence Length = 1484 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1101 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 1148 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 833 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 892 Query: 278 gac 280 ||| Sbjct: 893 gac 895
>dbj|AK119643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F11, full insert sequence Length = 1587 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1195 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 1242 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 927 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 986 Query: 278 gac 280 ||| Sbjct: 987 gac 989
>dbj|AK103783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145H23, full insert sequence Length = 1689 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1197 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 1244 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 929 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 988 Query: 278 gac 280 ||| Sbjct: 989 gac 991
>dbj|AK064027.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B02, full insert sequence Length = 1603 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 492 caggatgtggtcggcaacatggacctgtggacctttgatgacatgccc 539 |||||||| ||| ||||||||||||| |||| |||||||||||||||| Sbjct: 1099 caggatgttgtcagcaacatggacctctggagctttgatgacatgccc 1146 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 218 ctctgatcaggggagcaactcctttagttgctcagactttagctgggagaatgatatcaa 277 |||||| ||||| |||||||| ||| | ||||| |||||| ||||||||||||||| ||| Sbjct: 831 ctctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaa 890 Query: 278 gac 280 ||| Sbjct: 891 gac 893
>gb|AY108380.1| Zea mays PCO095978 mRNA sequence Length = 834 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 193 ttgaggctcctttcatgaatttttcctctgatcaggggagcaactcctttagttgctcag 252 |||||| |||| |||||||| | |||||| ||||| || |||||| || | ||||||| Sbjct: 142 ttgaggatcctatcatgaatctgcactctgaccagggaagtaactcccttggctgctcag 201 Query: 253 actttagctgggagaatgatatcaagacccctgacataacatc 295 |||| ||||||||||||||| ||||| || ||||| ||||| Sbjct: 202 acttgggctgggagaatgatactaagacaccagacatcacatc 244 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 505 gcaacatggacctgtggacctttgatgacatgccc 539 |||| |||||||| |||||||| |||||||||||| Sbjct: 463 gcaatatggacctctggaccttcgatgacatgccc 497
>gb|DP000032.1| Felis catus target 116 genomic scaffold Length = 376810 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 584 tgtatatatagacaaagggaat 605 |||||||||||||||||||||| Sbjct: 309568 tgtatatatagacaaagggaat 309547
>gb|AC133465.12| Mus musculus chromosome 1, clone RP24-469B15, complete sequence Length = 166435 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 tctactgagggaattgaggtt 573 ||||||||||||||||||||| Sbjct: 114361 tctactgagggaattgaggtt 114381
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 aatgcagttgaggctcctttc 206 ||||||||||||||||||||| Sbjct: 83690 aatgcagttgaggctcctttc 83670
>emb|AL133481.14| Human DNA sequence from clone RP11-342M3 on chromosome 10 Contains the 3' end of the PPIF gene for peptidylprolyl isomerase F (cyclophilin F), gene FLJ90798, the EIF5AP1 pseudogene for eukaryotic translation initiation factor 5A pseudogene 1, a novel gene, a novel pseudogene and a CpG island, complete sequence Length = 167234 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 tttgatgacatgcccttgtct 545 ||||||||||||||||||||| Sbjct: 30071 tttgatgacatgcccttgtct 30051
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 aatgcagttgaggctcctttc 206 ||||||||||||||||||||| Sbjct: 29073635 aatgcagttgaggctcctttc 29073615
>gb|AC152958.1| Mus musculus 6 BAC RP23-301K21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182995 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 tggacatcaacaagtgcttg 633 |||||||||||||||||||| Sbjct: 62941 tggacatcaacaagtgcttg 62960
>gb|AF191695.1| Equus caballus microsatellite UMNe61 sequence Length = 376 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccctgacataacatctgtgc 300 |||||||||||||||||||| Sbjct: 278 ccctgacataacatctgtgc 297
>ref|XM_959976.1| Neurospora crassa OR74A hypothetical protein (NCU02475.1) partial mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ttgatcttgccgacttggag 419 |||||||||||||||||||| Sbjct: 2270 ttgatcttgccgacttggag 2289
>ref|XM_331673.1| Neurospora crassa OR74A hypothetical protein (NCU02475.1) partial mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ttgatcttgccgacttggag 419 |||||||||||||||||||| Sbjct: 2270 ttgatcttgccgacttggag 2289
>gb|AC107767.7| Mus musculus chromosome 15, clone RP23-148C19, complete sequence Length = 191511 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 ctttagctgggagaatgata 273 |||||||||||||||||||| Sbjct: 158478 ctttagctgggagaatgata 158459
>gb|AC102675.9| Mus musculus, clone RP23-232O16, complete sequence Length = 208734 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 tggacatcaacaagtgcttg 633 |||||||||||||||||||| Sbjct: 199003 tggacatcaacaagtgcttg 199022
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 ttgatcttgccgacttggag 419 |||||||||||||||||||| Sbjct: 94687 ttgatcttgccgacttggag 94668
>emb|AL645950.13| Mouse DNA sequence from clone RP23-13C17 on chromosome 1 Contains the Eef1b2 gene for eukaryotic translation elongation factor 1 beta 2, the Ndufs1 gene for NADH dehydrogenase (ubiquinone) Fe-S protein 1 (Ndufs1), the Gpr1 gene for G-protein coupled receptor 1, the 5' end of a novel gene, two novel genes and two CpG islands, complete sequence Length = 138564 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gacagaggtcaatgaatctg 339 |||||||||||||||||||| Sbjct: 111483 gacagaggtcaatgaatctg 111464
>gb|AC130886.3| Homo sapiens X BAC RP11-361B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 79337 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ttcatgaatttttcctctga 223 |||||||||||||||||||| Sbjct: 50653 ttcatgaatttttcctctga 50634
>gb|AC087243.7| Homo sapiens 12p BAC RP11-549J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 22050 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tcaatgaatctgcatttgtc 347 |||||||||||||||||||| Sbjct: 1004 tcaatgaatctgcatttgtc 985
>gb|AC158919.4| Mus musculus chromosome 15, clone RP23-11O12, complete sequence Length = 193418 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 ctttagctgggagaatgata 273 |||||||||||||||||||| Sbjct: 187401 ctttagctgggagaatgata 187382
>gb|AC158403.4| Mus musculus chromosome 3, clone RP24-211L17, complete sequence Length = 156964 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 606 aagtattctggacatcaacaagtgcttg 633 ||||||| ||||| |||||||||||||| Sbjct: 50137 aagtattgtggacgtcaacaagtgcttg 50110
>gb|AC026310.24|AC026310 Homo sapiens 12 BAC RP11-662I13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 124000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tcaatgaatctgcatttgtc 347 |||||||||||||||||||| Sbjct: 102770 tcaatgaatctgcatttgtc 102751
>gb|AY973613.1| Manihot esculenta ethylene response factor mRNA, complete cds Length = 1460 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 atggacctgtggacctttgatgac 533 ||||||||||||| |||||||||| Sbjct: 1110 atggacctgtggagctttgatgac 1133
>gb|AC006346.1|AC006346 Homo sapiens PAC clone RP5-820G22 from 7, complete sequence Length = 130336 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tgggcaatgcagatgtgtat 110 |||||||||||||||||||| Sbjct: 126050 tgggcaatgcagatgtgtat 126031
>gb|AC008786.6|AC008786 Homo sapiens chromosome 5 clone CTD-2037L6, complete sequence Length = 177472 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ttgacagcattctaagctgt 482 |||||||||||||||||||| Sbjct: 147511 ttgacagcattctaagctgt 147492
>gb|AC000366.1|HSAC000366 Human cosmid g1862x046, complete sequence Length = 41702 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tgggcaatgcagatgtgtat 110 |||||||||||||||||||| Sbjct: 36580 tgggcaatgcagatgtgtat 36561
>gb|AC000362.1|HSAC000362 Human cosmid g1346a094, complete sequence Length = 40977 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tgggcaatgcagatgtgtat 110 |||||||||||||||||||| Sbjct: 3550 tgggcaatgcagatgtgtat 3531
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ttaaatcagcaatttgtgca 154 |||||||||||||||||||| Sbjct: 2845373 ttaaatcagcaatttgtgca 2845354
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ttaaatcagcaatttgtgca 154 |||||||||||||||||||| Sbjct: 2748702 ttaaatcagcaatttgtgca 2748683
>emb|AL928600.8| Mouse DNA sequence from clone RP23-348O19 on chromosome 2, complete sequence Length = 129435 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 ggacctttgatgacatgccc 539 |||||||||||||||||||| Sbjct: 66510 ggacctttgatgacatgccc 66491 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,176,371 Number of Sequences: 3902068 Number of extensions: 5176371 Number of successful extensions: 92903 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92675 Number of HSP's gapped (non-prelim): 221 length of query: 642 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 619 effective length of database: 17,143,297,704 effective search space: 10611701278776 effective search space used: 10611701278776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
