>MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 9)
           (ATP-energized glutathione S-conjugate pump 9)
          Length = 1490

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = +1

Query: 238 ICDYLQQSETTKDAMERC-KEVISLETEVENSSIV-EPETA 354
           I  YLQQSET KDA+E C K+   L  E+EN +   EPE++
Sbjct: 604 IASYLQQSETQKDAVEYCSKDHTELSVEIENGAFSWEPESS 644

>SPR2_CAEEL (Q18240) Suppressor of presenilin 2|
          Length = 312

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
 Frame = +1

Query: 10  KESISEAISDLKVDIIASLRSRLDIILDEADDDSTTNDV--------ENSPSQKVTQVNF 165
           +E +  A+ DL+V     LRS   II+    ++  TN+V          SPS ++T++ +
Sbjct: 99  QEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESPSTEITEIEW 158

Query: 166 HELREPYSFSFPR-----RILIPWLAGSYICDYLQQSETTKD 276
            E ++P    FP         + WL  + + D  + +E  KD
Sbjct: 159 KENKKP---PFPEDGDSAHTFLEWLTYAALPDSDEIAEVIKD 197

>MRP15_ARATH (Q7FB56) Putative multidrug resistance-associated protein 15 (EC|
           3.6.3.44) (Glutathione S-conjugate transporting ATPase
           15) (ATP-energized glutathione S-conjugate pump 15)
          Length = 1037

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 238 ICDYLQQSETTKDAMERC-KEVISLETEVENSSIV-EPETA 354
           I  YLQQSET KDA+E C  +      E+EN +   EPE++
Sbjct: 188 IASYLQQSETQKDAVEYCSNDHTEFSVEIENGAFSWEPESS 228

>PEPL_HUMAN (O60437) Periplakin (195 kDa cornified envelope precursor protein)|
           (190 kDa paraneoplastic pemphigus antigen)
          Length = 1756

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = +1

Query: 250 LQQSETTKDAMERCKEVISLETEVENSSIVEPETAASSATLESFWDVVPGASSRVWAGPS 429
           L+Q    +D+ ER K++ ++  E+     +EPE   S+A  E+F   +PG+ +       
Sbjct: 533 LEQGRAVQDSAERAKDLKNITNELLR---IEPEKTRSTAEGEAFIQALPGSGTTPLLRTQ 589

Query: 430 LEDGRPK 450
           +ED   K
Sbjct: 590 VEDTNRK 596

>PSY_CAPAN (P37272) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)|
          Length = 419

 Score = 32.7 bits (73), Expect = 0.84
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +3

Query: 315 RSGELLHC*TRNRSI*CDTRIILGCGA--WSFLTCVGGAQSGRWAP*TGDVFRESTGQRF 488
           R G  +   +  R++ C+ RI  G G   WSF + +GGAQ+G             +G++F
Sbjct: 25  REGNRIFDSSGRRNLACNERIKRGGGKQRWSFGSYLGGAQTG-------------SGRKF 71

Query: 489 QHPSCLVCAPGGSST 533
              S +V  P G  T
Sbjct: 72  SVRSAIVATPAGEMT 86

>VATE_CANAL (O94072) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E|
           subunit) (Vacuolar proton pump E subunit)
          Length = 226

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +1

Query: 256 QSETTKDAMERCKEV---ISLETEVENSSIVEPETAASSATLE 375
           Q+   K+A E+ KE+      E E+E +SIV  ETAA  +T E
Sbjct: 16  QAFIEKEAKEKAKEIKLKADEEYEIEKASIVRSETAAIDSTYE 58

>M3K1_RAT (Q62925) Mitogen-activated protein kinase kinase kinase 1 (EC|
            2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1)
            (MEKK 1)
          Length = 1493

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 319  LLFPVISLPC-SAPLRPSLSLIVASSHKYRS 230
            L+FP IS PC SAP  P+ S+  AS H+ R+
Sbjct: 959  LMFPAISAPCSSAPSVPAGSVTDASKHRPRA 989

>FHL1_YEAST (P39521) Pre-rRNA-processing protein FHL1|
          Length = 936

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 10  KESISEAISDLKVDIIASLRSRLDIILDEADDDSTTNDVENSPSQKVTQVN 162
           KESI+ + +  +V I   L    DI+ +E    +TT D+EN     VT  N
Sbjct: 38  KESITNSPTS-EVPIETKLPKSSDIVTEEKHPQNTTTDIENEVENPVTDDN 87

>TRPA_HALSA (Q9HSB9) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 276

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = -1

Query: 485 PLPCALPEHITCL---GRPSSRLGPAHTREEAPGTTSQNDSSVALDAAVSGSTMEEFSTS 315
           P P A  E+I  L   G     LG   +   A GTT QN    ALDA ++     +    
Sbjct: 25  PTPAATAEYIDALVDGGTDVIELGLPFSEPVAEGTTIQNAIKRALDAGMTPDAYLDLVAR 84

Query: 314 VSSDI 300
           + +D+
Sbjct: 85  IDADV 89

>SMP2_YEAST (P32567) Protein SMP2|
          Length = 862

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -1

Query: 464 EHITCLGRPSSRLGPAHTREEAPGTTSQNDSSVALDAAVSGSTMEEFSTSVSSDITSLQR 285
           EH+T L  P +           P T + + S + LDA  SGST+   S+S S   T  + 
Sbjct: 271 EHLTDLSPPGT-----------PPTMATSGSVLGLDAMESGSTLNSLSSSPSGSDTEDET 319

Query: 284 SIA 276
           S +
Sbjct: 320 SFS 322

>RPOC1_HUPLU (Q5SCX9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 676

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = +1

Query: 238 ICDYLQQSETTKDAMERCKEVI---SLETEVENSSIVEPETAASSATLESFWDVVPGASS 408
           + D+L++   T + +  C++ +   ++++  +NS   EP T  +   L+SF D++ G   
Sbjct: 314 LIDFLEKRTFTPEGVIVCQKKLVQEAVDSLFDNSMCKEPMTDLNGRLLKSFSDIIQGKEG 373

Query: 409 R 411
           R
Sbjct: 374 R 374

>PCRB_METMA (Q8PYC0) Protein pcrB homolog|
          Length = 247

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 504 LVCAPGGSSTWIYVSRSLPTRKPESNSCYVL 596
           L+  PGG+  W+  ++ +P +KPE  + Y L
Sbjct: 130 LIVEPGGTVGWVGDAKLIPRKKPEIAAVYAL 160

>PCRB_METBF (Q46EN8) Protein pcrB homolog|
          Length = 247

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 504 LVCAPGGSSTWIYVSRSLPTRKPESNSCYVL 596
           L+  PGG+  W+  ++ +P +KPE  + Y L
Sbjct: 130 LIVEPGGTVGWVGDAKLIPRKKPELAAVYAL 160


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.132    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,033,625
Number of Sequences: 219361
Number of extensions: 1712237
Number of successful extensions: 5004
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4988
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)