ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags7d24 |
|---|---|
| Clone Library Name | barley_pub |
>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 192 bits (487), Expect = 8e-49 Identities = 95/186 (51%), Positives = 112/186 (60%) Frame = +1 Query: 13 AYSATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPW 192 A +T ALP TI +++ +W LV FPL V+GGI GKN+ S F APCRT REIPP PW Sbjct: 400 ANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPW 459 Query: 193 YRTTVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXAL 372 Y++TV M + GFLPFSAI +ELYYIFA+VWG Y AL Sbjct: 460 YKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIAL 519 Query: 373 TYFQLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYA 552 TYFQL+ ED+ WWWRS L GSTG F+ RS+MSG +QT FFGY Y Sbjct: 520 TYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYV 579 Query: 553 FFLMLG 570 FFLMLG Sbjct: 580 FFLMLG 585
>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 192 bits (487), Expect = 8e-49 Identities = 95/186 (51%), Positives = 112/186 (60%) Frame = +1 Query: 13 AYSATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPW 192 A +T ALP TI +++ +W LV FPL V+GGI GKN+ S F APCRT REIPP PW Sbjct: 400 ANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPW 459 Query: 193 YRTTVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXAL 372 Y++TV M + GFLPFSAI +ELYYIFA+VWG Y AL Sbjct: 460 YKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIAL 519 Query: 373 TYFQLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYA 552 TYFQL+ ED+ WWWRS L GSTG F+ RS+MSG +QT FFGY Y Sbjct: 520 TYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYV 579 Query: 553 FFLMLG 570 FFLMLG Sbjct: 580 FFLMLG 585
>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor| (hMP70) Length = 606 Score = 192 bits (487), Expect = 8e-49 Identities = 95/186 (51%), Positives = 112/186 (60%) Frame = +1 Query: 13 AYSATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPW 192 A +T ALP TI +++ +W LV FPL V+GGI GKN+ S F APCRT REIPP PW Sbjct: 400 ANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPW 459 Query: 193 YRTTVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXAL 372 Y++TV M + GFLPFSAI +ELYYIFA+VWG Y AL Sbjct: 460 YKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIAL 519 Query: 373 TYFQLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYA 552 TYFQL+ ED+ WWWRS L GSTG F+ RS+MSG +QT FFGY Y Sbjct: 520 TYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYV 579 Query: 553 FFLMLG 570 FFLMLG Sbjct: 580 FFLMLG 585
>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor| Length = 589 Score = 155 bits (393), Expect = 6e-38 Identities = 84/186 (45%), Positives = 98/186 (52%) Frame = +1 Query: 13 AYSATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPW 192 A +T ALP TI +++ +W LV FPL V+GGI GKN+ S F APCRT REIPP P Sbjct: 400 ANGSTQALPVTTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQP- 458 Query: 193 YRTTVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXAL 372 AI +ELYYIFA+VWG Y AL Sbjct: 459 ----------------CAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIAL 502 Query: 373 TYFQLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYA 552 TYFQL+ ED+ WWWRS L GSTG F+ RS+MSG +QT FFGY Y Sbjct: 503 TYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYV 562 Query: 553 FFLMLG 570 FFLMLG Sbjct: 563 FFLMLG 568
>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor| Length = 587 Score = 134 bits (336), Expect = 2e-31 Identities = 68/189 (35%), Positives = 92/189 (48%) Frame = +1 Query: 4 VAIAYSATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPP 183 +AI Y A+ A+PFGT+ + I V PL ++G I G+N + PCR PR IP Sbjct: 378 IAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPE 437 Query: 184 LPWYRTTVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXX 363 W+ + + G LPF +I+IE+Y+IF S W ++IY Sbjct: 438 KKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVT 497 Query: 364 XALTYFQLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACI 543 TYF L AED+ W W SFL ST +V ++ M G QTSF+FGYMA Sbjct: 498 IVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVF 557 Query: 544 CYAFFLMLG 570 A +M G Sbjct: 558 STALGIMCG 566
>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor| (SM-11044-binding protein) (EP70-P-iso) Length = 589 Score = 134 bits (336), Expect = 2e-31 Identities = 68/189 (35%), Positives = 92/189 (48%) Frame = +1 Query: 4 VAIAYSATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPP 183 +AI Y A+ A+PFGT+ + I V PL ++G I G+N + PCR PR IP Sbjct: 380 IAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPE 439 Query: 184 LPWYRTTVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXX 363 W+ + + G LPF +I+IE+Y+IF S W ++IY Sbjct: 440 KKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVT 499 Query: 364 XALTYFQLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACI 543 TYF L AED+ W W SFL ST +V ++ M G QTSF+FGYMA Sbjct: 500 IVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVF 559 Query: 544 CYAFFLMLG 570 A +M G Sbjct: 560 STALGIMCG 568
>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4| Length = 625 Score = 125 bits (314), Expect = 9e-29 Identities = 59/183 (32%), Positives = 96/183 (52%) Frame = +1 Query: 22 ATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPWYRT 201 ++ A+PF T+ ++ +W ++ PL+ LG G K + P RT + PR+IP WY Sbjct: 423 SSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFR-KQPYDNPVRTNQIPRQIPEQRWYMN 481 Query: 202 TVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYF 381 + MAG LPF A++IEL++IF+++W ++ Y + YF Sbjct: 482 RFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYF 541 Query: 382 QLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYAFFL 561 QL AED+ WWWR+FL G + F+V + D+ F+ + +FGY A + +F+L Sbjct: 542 QLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWL 601 Query: 562 MLG 570 + G Sbjct: 602 LTG 604
>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 121 bits (304), Expect = 1e-27 Identities = 59/183 (32%), Positives = 90/183 (49%) Frame = +1 Query: 22 ATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPWYRT 201 ++AA+PFGT+ I+ +W ++ PL +G G K+ + P RT + PR+IP +Y Sbjct: 461 SSAAIPFGTLVAILALWFCISVPLTFIGAYFGFK-KNAIEHPVRTNQIPRQIPEQSFYTK 519 Query: 202 TVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYF 381 +P + M G LPF I+I+L++I S+W H++Y L YF Sbjct: 520 PLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYF 579 Query: 382 QLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYAFFL 561 L AED+ W WRSFL G T + ++ ++G T +FGY + FFL Sbjct: 580 HLCAEDYHWQWRSFLTSGFTAVYFLVYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFL 639 Query: 562 MLG 570 G Sbjct: 640 FTG 642
>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 121 bits (304), Expect = 1e-27 Identities = 59/183 (32%), Positives = 90/183 (49%) Frame = +1 Query: 22 ATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPWYRT 201 ++AA+PFGT+ I+ +W ++ PL +G G K+ + P RT + PR+IP +Y Sbjct: 461 SSAAIPFGTLVAILALWFCISVPLTFIGAYFGFK-KNAIEHPVRTNQIPRQIPEQSFYTK 519 Query: 202 TVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYF 381 +P + M G LPF I+I+L++I S+W H++Y L YF Sbjct: 520 PLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYF 579 Query: 382 QLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYAFFL 561 L AED+ W WRSFL G T + ++ ++G T +FGY + FFL Sbjct: 580 HLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFL 639 Query: 562 MLG 570 G Sbjct: 640 FTG 642
>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor (p76)| Length = 663 Score = 121 bits (304), Expect = 1e-27 Identities = 59/183 (32%), Positives = 90/183 (49%) Frame = +1 Query: 22 ATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPWYRT 201 ++AA+PFGT+ I+ +W ++ PL +G G K+ + P RT + PR+IP +Y Sbjct: 461 SSAAIPFGTLVAILALWFCISVPLTFIGAYFGFK-KNAIEHPVRTNQIPRQIPEQSFYTK 519 Query: 202 TVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYF 381 +P + M G LPF I+I+L++I S+W H++Y L YF Sbjct: 520 PLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYF 579 Query: 382 QLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYAFFL 561 L AED+ W WRSFL G T + ++ ++G T +FGY + FFL Sbjct: 580 HLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFL 639 Query: 562 MLG 570 G Sbjct: 640 FTG 642
>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor| Length = 662 Score = 121 bits (304), Expect = 1e-27 Identities = 59/183 (32%), Positives = 90/183 (49%) Frame = +1 Query: 22 ATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPWYRT 201 ++AA+PFGT+ I+ +W ++ PL +G G K+ + P RT + PR+IP +Y Sbjct: 460 SSAAIPFGTLVAILALWFCISVPLTFIGAYFGFK-KNAIEHPVRTNQIPRQIPEQSFYTK 518 Query: 202 TVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYF 381 +P + M G LPF I+I+L++I S+W H++Y L YF Sbjct: 519 PLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYF 578 Query: 382 QLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYAFFL 561 L AED+ W WRSFL G T + ++ ++G T +FGY + FFL Sbjct: 579 HLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFL 638 Query: 562 MLG 570 G Sbjct: 639 FTG 641
>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane| protein) (Pheromone alpha-factor transporter) (Acidic 24 kDa late endocytic intermediate component) Length = 667 Score = 95.5 bits (236), Expect = 1e-19 Identities = 48/183 (26%), Positives = 82/183 (44%) Frame = +1 Query: 22 ATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKNSKSEFQAPCRTTKYPREIPPLPWYRT 201 ++ +P T+ +V +W L + PL G + + + P +T + R+IP PWY Sbjct: 465 SSGVIPASTLFFMVFLWFLFSIPLSFAGSLIARKRCHWDEHPTKTNQIARQIPFQPWYLK 524 Query: 202 TVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYF 381 T+P +AG PF +I +ELY+I+ S+W ++I+ +TY Sbjct: 525 TIPATLIAGIFPFGSIAVELYFIYTSLWFNKIFYMFGFLFFSFLLLTLTSSLVTILITYH 584 Query: 382 QLAAEDHEWWWRSFLCGGSTGFFVXXXXXXXXXARSDMSGFMQTSFFFGYMACICYAFFL 561 L E+ +W WR F+ GG+ G + + + GF + GY + I L Sbjct: 585 SLCLENWKWQWRGFIIGGA-GCALYVFIHSILFTKFKLGGFTTIVLYVGYSSVISLLCCL 643 Query: 562 MLG 570 + G Sbjct: 644 VTG 646
>YEU3_YEAST (P40071) Hypothetical protein YER113C precursor| Length = 706 Score = 44.3 bits (103), Expect = 3e-04 Identities = 43/206 (20%), Positives = 76/206 (36%), Gaps = 22/206 (10%) Frame = +1 Query: 1 TVAIAYSATAALPFGTICVIVLIWTLVTFPLLVLGGIAGKN-----------SKSEFQAP 147 ++ A+ +T+ALPF TI + I+ +V PL + GGI N +K E + Sbjct: 479 SIVWAHDSTSALPFKTIVFFMSIYFIVCIPLSLFGGIVANNIPLPQYWLSGITKDESNSD 538 Query: 148 CRTTKYPR---EIPPLPWYRTTVPQMAMAGFLPFSAIYIELYYIFASVWGHR----IYXX 306 P+ + PL + + + G P IY+E+ Y++ S+W + + Sbjct: 539 GNGLFVPKSRAKFNPLVYCG-----IYLCGIFPLLVIYVEMQYVYKSLWLEKTTFYYFYG 593 Query: 307 XXXXXXXXXXXXXXXXXXXXALTYFQLAAED----HEWWWRSFLCGGSTGFFVXXXXXXX 474 + + ED + W W+ F G S G ++ Sbjct: 594 FLFLSIILLCVLTMEISIIGSYLLMRFCFEDKVVRNNWRWKCFEMGFSGGVYMELYSLYY 653 Query: 475 XXARSDMSGFMQTSFFFGYMACICYA 552 A ++ GF + ICY+ Sbjct: 654 IFAVLNIHGFS------SILISICYS 673 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,553,409 Number of Sequences: 219361 Number of extensions: 1490808 Number of successful extensions: 4443 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4274 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4421 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
