ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6o23 |
|---|---|
| Clone Library Name | barley_pub |
>YEQ8_YEAST (P40051) Hypothetical 58.0 kDa peptidase in PTP3-ILV1 intergenic| region (EC 3.4.-.-) Length = 511 Score = 77.0 bits (188), Expect = 3e-14 Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 6/118 (5%) Frame = +1 Query: 124 IDVGQPTPRSHPELLADEEITPGITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIV 303 I+ GQP + P L+ E+TPGI++ EY RR +L + LP KS I+A D Q + V Sbjct: 42 IEAGQPLHETRPFLIKSGELTPGISALEYYERRIRLAETLPPKSCVILAGNDIQFASGAV 101 Query: 304 PYSFRQNGDYLYITGCTQPGGVAVLSK------ETGLCMFMPDKHKEDVVWEGPTAGV 459 Y F+Q D Y++G +P V +L K +T M +P K WEG +GV Sbjct: 102 FYPFQQENDLFYLSGWNEPNSVMILEKPTDSLSDTIFHMLVPPKDAFAEKWEGFRSGV 159
>YDE5_SCHPO (Q10439) Probable peptidase C12B10.05 (EC 3.4.-.-)| Length = 486 Score = 72.0 bits (175), Expect = 9e-13 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Frame = +1 Query: 100 VAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEEYICRRKKLLDALPDKSLAIIASAD 279 V+Y + GQ T +HP +L E+TP I+++EY RR ++ L D I+ SA Sbjct: 31 VSYLNKSALRCGQATDSTHPHILQPGELTPRISAQEYKTRRDRVASLLEDNDFMIVTSAP 90 Query: 280 QQMMTDIVPYSFRQNGDYLYITGCTQPGGVAVLSKETG-----LCMFMPDKHKEDVVWEG 444 + M Y + Q+ ++ Y+TGC +P V ++ K +++P K+ WEG Sbjct: 91 VRHMCGAAFYEYHQDPNFYYLTGCLEPNAVLLMFKNGASGSYDCSLYLPSKNPYIEKWEG 150 Query: 445 PTAG 456 G Sbjct: 151 LRTG 154
>AMPP_ECOLI (P15034) Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P II) (APP-II) (Aminoacylproline aminopeptidase) Length = 440 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/64 (34%), Positives = 36/64 (56%) Frame = +1 Query: 193 ITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIVPYSFRQNGDYLYITGCTQPGGVA 372 I+ +E+ RR+ L++ + S A+I +A + + Y +RQN D+ Y TG +P V Sbjct: 3 ISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVL 62 Query: 373 VLSK 384 VL K Sbjct: 63 VLIK 66
>AMPP_HAEIN (P44881) Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P II) (APP-II) (Aminoacylproline aminopeptidase) Length = 430 Score = 35.0 bits (79), Expect = 0.13 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = +1 Query: 193 ITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIVPYSFRQNGDYLYITGCTQPGGVA 372 + EE+ RR ++ + S ++ S ++ + Y FRQ+ + Y+TG +P Sbjct: 9 LPKEEFEERRTRVFAQMQPNSALLLFSEIEKRRNNDCTYPFRQDSYFWYLTGFNEPNAAL 68 Query: 373 VLSKETGL---CMFMPDKHKEDVVWEGPTAGVE 462 +L K + +F+ + W G GVE Sbjct: 69 LLLKTEQVEKAIIFLRPRDPLLETWNGRRLGVE 101
>YFH6_YEAST (P43590) Hypothetical 61.8 kDa peptidase in MPR1-GCN20 intergenic| region (EC 3.4.-.-) Length = 535 Score = 33.5 bits (75), Expect = 0.36 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = +1 Query: 313 FRQNGDYLYITGCTQPGGVAVLSKETG-LCMFMPDKHKEDVVWEG 444 FRQN + +++G P + + T L +F+P+ +EDV+W G Sbjct: 118 FRQNRYFYHLSGVDIPASAILFNCSTDKLTLFLPNIDEEDVIWSG 162
>AMPP1_STRLI (P0A3Z2) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Xaa-Pro| aminopeptidase I) (X-Pro aminopeptidase I) (Aminopeptidase P I) (APP) (PEPP I) (Aminoacylproline aminopeptidase I) Length = 490 Score = 32.7 bits (73), Expect = 0.62 Identities = 20/70 (28%), Positives = 34/70 (48%) Frame = +1 Query: 178 EITPGITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIVPYSFRQNGDYLYITGCTQ 357 ++ P + E RR L P + L +I + + + ++ YSFR + +Y Y+TG Sbjct: 52 DLEPIAQAAETAARRAALSARFPGERL-VIPAGNLKTRSNDTEYSFRASVEYAYLTGNQT 110 Query: 358 PGGVAVLSKE 387 GV V+ E Sbjct: 111 EDGVLVMEPE 120
>AMPP1_STRCO (P0A3Z1) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Xaa-Pro| aminopeptidase I) (X-Pro aminopeptidase I) (Aminopeptidase P I) (APP) (PEPP I) (Aminoacylproline aminopeptidase I) Length = 490 Score = 32.7 bits (73), Expect = 0.62 Identities = 20/70 (28%), Positives = 34/70 (48%) Frame = +1 Query: 178 EITPGITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIVPYSFRQNGDYLYITGCTQ 357 ++ P + E RR L P + L +I + + + ++ YSFR + +Y Y+TG Sbjct: 52 DLEPIAQAAETAARRAALSARFPGERL-VIPAGNLKTRSNDTEYSFRASVEYAYLTGNQT 110 Query: 358 PGGVAVLSKE 387 GV V+ E Sbjct: 111 EDGVLVMEPE 120
>SRG6_CAEEL (P54128) Serpentine receptor class gamma-6 (Protein srg-6)| Length = 311 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +2 Query: 116 EE*LMLASQHPDLIPSY*LMRRLHQASQV--RSTYVEEKSFWMLY 244 EE L L Q LIPS+ L+ ++ QV R Y E++ FW+LY Sbjct: 18 EENLKLMGQLVYLIPSFILISKMIYVIQVKHRGDYHEQRRFWLLY 62
>RPOB_THETN (Q8R7U6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1234 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/83 (32%), Positives = 39/83 (46%) Frame = +1 Query: 88 IIRRVAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEEYICRRKKLLDALPDKSLAII 267 IIR A G I VG+ TP+ EL A+E + I E+ + D SL + Sbjct: 841 IIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEK--------AREVRDTSLR-V 891 Query: 268 ASADQQMMTDIVPYSFRQNGDYL 336 + ++ D+ YS R+NGD L Sbjct: 892 PHGESGIVVDVKVYS-RENGDEL 913
>RPOB_OCEIH (Q8ETY8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1179 Score = 30.8 bits (68), Expect = 2.4 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +1 Query: 82 HSIIRRVAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEE 207 H IIR A T G I VG+ TP+ EL A+E + I E+ Sbjct: 830 HGIIRVGAEVTDGDILVGKVTPKGVTELSAEERLLHAIFGEK 871
>SKO1_YEAST (Q02100) CRE-binding bZIP protein SKO1| Length = 647 Score = 30.4 bits (67), Expect = 3.1 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = -1 Query: 188 GVISSSANNSG*DLGVGWPTSIIPPVVYATRLIIL*EVDNKRDAPSLARSVL 33 G+I SS++NS ++ V P+S PP +T LI L E R S A SVL Sbjct: 480 GIIPSSSSNSQFNVNVSTPSSSSPP---STSLIALLESSISRSDYSSAMSVL 528
>PEPD_HUMAN (P12955) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 492 Score = 30.0 bits (66), Expect = 4.0 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Frame = +1 Query: 199 SEEYICRRKKLLDALPDKSLAIIASAD--QQMMTDIVPYSFRQNGDYLYITGCTQPGGVA 372 + + +C R + A+ S+ ++ + Q+ TD FRQ + + G T+PG Sbjct: 25 NRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTD-TGVLFRQESFFHWAFGVTEPGCYG 83 Query: 373 VLSKETG-LCMFMPDKHKEDVVWEG 444 V+ +TG +F+P W G Sbjct: 84 VIDVDTGKSTLFVPRLPASHATWMG 108
>RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain)| Length = 963 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Frame = +1 Query: 64 RLLSTSHSIIRRVAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEE------YICRRK 225 RLL +I+ + I ++G P +HPE + + +TP S E ++ Sbjct: 597 RLLGRLARLIKEAVWEK--IKEIGDRQPENHPEGVPEVPLTPEAVSVELRPLMLWMANTT 654 Query: 226 KLLDALPDKSLAIIASADQQ 285 +LL + +K L + ADQ+ Sbjct: 655 ELLSFVQEKVLEMEKEADQE 674
>MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific-processing alpha-mannosidase) Length = 699 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +2 Query: 35 GRCEQARGRLACYLPLTV*LGVLHTLPEE*LMLASQ 142 GR L C+LP T+ LGV H LP + LA + Sbjct: 516 GRFSAKMDHLVCFLPGTLALGVYHGLPASHMELAQE 551
>RAIN_MOUSE (Q3U0S6) Ras-interacting protein 1 (Rain)| Length = 961 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Frame = +1 Query: 64 RLLSTSHSIIRRVAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEE------YICRRK 225 RLL +I+ + I ++G P +HPE + + +TP S E ++ Sbjct: 591 RLLGRLARLIKEAVWEK--IKEIGDRQPENHPEGVPEVPLTPEAVSVELRPLILWMANTT 648 Query: 226 KLLDALPDKSLAIIASADQQ 285 +LL + +K L + ADQ+ Sbjct: 649 ELLSFVQEKVLEMEKEADQE 668
>FBX2_HUMAN (Q9UK22) F-box only protein 2| Length = 296 Score = 29.3 bits (64), Expect = 6.9 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Frame = +1 Query: 130 VGQP---TPRSHPELLADEEITPGITSEEYICRRKKLLDALPD----KSLAIIASADQQM 288 VGQP +P PE + EE P EE LD LP+ + LA + +A+ Sbjct: 10 VGQPEEASPEEQPEEASAEEERPEDQQEEEAAAAAAYLDELPEPLLLRVLAALPAAELVQ 69 Query: 289 MTDIVPYSFRQ--NGDYLYITGCTQPG 363 +V +++ +G L++ C Q G Sbjct: 70 ACRLVCLRWKELVDGAPLWLLKCQQEG 96
>MATK_TRIWI (Q8MCL8) Maturase K (Intron maturase)| Length = 506 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 519 LFHFTKWKCFICLEEIDSCFNSSSRTFPNYILLVFIWHEHT*TSFLT*NCYTTRLRT 349 L+HF W CFI ++ S F+ S+ ++ ++ + FL Y RL++ Sbjct: 181 LYHFXNWNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSYHLRLKS 237
>MATK_TRIWO (Q8MCL7) Maturase K (Intron maturase)| Length = 506 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 519 LFHFTKWKCFICLEEIDSCFNSSSRTFPNYILLVFIWHEHT*TSFLT*NCYTTRLRT 349 L+HF W CFI ++ S F+ S+ ++ ++ + FL Y RL++ Sbjct: 181 LYHFCNWNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSYHLRLKS 237
>MATK_TRIMI (Q8MCM7) Maturase K (Intron maturase)| Length = 506 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 519 LFHFTKWKCFICLEEIDSCFNSSSRTFPNYILLVFIWHEHT*TSFLT*NCYTTRLRT 349 L+HF W CFI ++ S F+ S+ ++ ++ + FL Y RL++ Sbjct: 181 LYHFCNWNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSYHLRLKS 237
>MATK_TRIGC (Q8MCN2) Maturase K (Intron maturase)| Length = 506 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 519 LFHFTKWKCFICLEEIDSCFNSSSRTFPNYILLVFIWHEHT*TSFLT*NCYTTRLRT 349 L+HF W CFI ++ S F+ S+ ++ ++ + FL Y RL++ Sbjct: 181 LYHFCNWNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSYHLRLKS 237
>MATK_TRIBE (Q5YJV6) Maturase K (Intron maturase)| Length = 506 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 519 LFHFTKWKCFICLEEIDSCFNSSSRTFPNYILLVFIWHEHT*TSFLT*NCYTTRLRT 349 L+HF W CFI ++ S F+ S+ ++ ++ + FL Y RL++ Sbjct: 181 LYHFCNWNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSYHLRLKS 237
>MATK_TRIAO (Q8MCN9) Maturase K (Intron maturase)| Length = 506 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -3 Query: 519 LFHFTKWKCFICLEEIDSCFNSSSRTFPNYILLVFIWHEHT*TSFLT*NCYTTRLRT 349 L+HF W CFI ++ S F+ S+ ++ ++ + FL Y RL++ Sbjct: 181 LYHFCNWNCFIPTKKSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSYHLRLKS 237 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.134 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,155,132 Number of Sequences: 219361 Number of extensions: 1469197 Number of successful extensions: 3679 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3597 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3679 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
