| Clone Name | bags7d19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F01, full insert sequence Length = 2370 Score = 331 bits (167), Expect = 1e-87 Identities = 287/327 (87%) Strand = Plus / Plus Query: 7 aacagatgatgcatctttgatcccagctgagcaattccttgctcagcatccgggccctgc 66 ||||||||| || ||| | || ||||| || || |||||||||||||| ||||||||||| Sbjct: 1882 aacagatgacgcttctcttataccagcagaacagttccttgctcagcacccgggccctgc 1941 Query: 67 tcgcatatcagtttctgtgcccaacctggatgaaggaaacttgcgaggccaagttttgga 126 || ||| ||||| ||||| |||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 1942 tcacatctcagtgtctgtacccaaccttgatgaaggaaacctgcgaggccaagtgttgga 2001 Query: 127 gatctctgtccaatcactctcagacacaattggcagcctgaaggagcaggttgctggaga 186 |||| |||||||||||||||||||||| ||||||| || ||||||||| |||||||||| Sbjct: 2002 gatcggtgtccaatcactctcagacacagttggcagtctaaaggagcagattgctggaga 2061 Query: 187 gctgcagcttcctgctaataagcagaagctgagtgtgaggactagtttcctcaaggacaa 246 | ||||||| |||||||||||||||||| |||| ||| |||||||||||||||| ||||| Sbjct: 2062 gttgcagctccctgctaataagcagaagttgagcgtgcggactagtttcctcaaagacaa 2121 Query: 247 tctttctcttgcctattacaatgttggccccggggtggtcatcaatctagctctgaggga 306 ||| ||||||| || ||||| ||||||| || ||||| |||||| || | |||||||| Sbjct: 2122 tctcactcttgcttactacaacattggccctggagtggtgatcaatttaacactgaggga 2181 Query: 307 gcgtggtgggagaaagaaatgagcttt 333 ||||||||||||||||||||||||||| Sbjct: 2182 gcgtggtgggagaaagaaatgagcttt 2208
>dbj|AK119874.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-E06, full insert sequence Length = 2578 Score = 331 bits (167), Expect = 1e-87 Identities = 287/327 (87%) Strand = Plus / Plus Query: 7 aacagatgatgcatctttgatcccagctgagcaattccttgctcagcatccgggccctgc 66 ||||||||| || ||| | || ||||| || || |||||||||||||| ||||||||||| Sbjct: 2082 aacagatgacgcttctcttataccagcagaacagttccttgctcagcacccgggccctgc 2141 Query: 67 tcgcatatcagtttctgtgcccaacctggatgaaggaaacttgcgaggccaagttttgga 126 || ||| ||||| ||||| |||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 2142 tcacatctcagtgtctgtacccaaccttgatgaaggaaacctgcgaggccaagtgttgga 2201 Query: 127 gatctctgtccaatcactctcagacacaattggcagcctgaaggagcaggttgctggaga 186 |||| |||||||||||||||||||||| ||||||| || ||||||||| |||||||||| Sbjct: 2202 gatcggtgtccaatcactctcagacacagttggcagtctaaaggagcagattgctggaga 2261 Query: 187 gctgcagcttcctgctaataagcagaagctgagtgtgaggactagtttcctcaaggacaa 246 | ||||||| |||||||||||||||||| |||| ||| |||||||||||||||| ||||| Sbjct: 2262 gttgcagctccctgctaataagcagaagttgagcgtgcggactagtttcctcaaagacaa 2321 Query: 247 tctttctcttgcctattacaatgttggccccggggtggtcatcaatctagctctgaggga 306 ||| ||||||| || ||||| ||||||| || ||||| |||||| || | |||||||| Sbjct: 2322 tctcactcttgcttactacaacattggccctggagtggtgatcaatttaacactgaggga 2381 Query: 307 gcgtggtgggagaaagaaatgagcttt 333 ||||||||||||||||||||||||||| Sbjct: 2382 gcgtggtgggagaaagaaatgagcttt 2408
>gb|AY105256.1| Zea mays PCO065087 mRNA sequence Length = 613 Score = 325 bits (164), Expect = 8e-86 Identities = 269/304 (88%) Strand = Plus / Plus Query: 26 atcccagctgagcaattccttgctcagcatccgggccctgctcgcatatcagtttctgtg 85 |||||||||||||| |||||||||||||||| ||| |||||| |||| || || ||||| Sbjct: 305 atcccagctgagcagttccttgctcagcatcagggtcctgctagcatctctgtatctgta 364 Query: 86 cccaacctggatgaaggaaacttgcgaggccaagttttggagatctctgtccaatcactc 145 |||||||| |||||||| ||||||||||||||||||||| |||| |||| |||||||| Sbjct: 365 cccaacctcgatgaagggaacttgcgaggccaagttttgcagattcctgttcaatcactg 424 Query: 146 tcagacacaattggcagcctgaaggagcaggttgctggagagctgcagcttcctgctaat 205 ||||||||| |||| || |||||||||||| ||||||||||| | ||||| ||||||||| Sbjct: 425 tcagacacagttggtagtctgaaggagcagattgctggagagttacagctccctgctaat 484 Query: 206 aagcagaagctgagtgtgaggactagtttcctcaaggacaatctttctcttgcctattac 265 ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| || ||| Sbjct: 485 aagcagaagctgagtgtgaggactagtttcctcaaagacaaccttactcttgcttactac 544 Query: 266 aatgttggccccggggtggtcatcaatctagctctgagggagcgtggtgggagaaagaaa 325 ||||| || || || ||||| ||||||||| | || |||||||||||||||||||||||| Sbjct: 545 aatgtgggtcctggagtggtgatcaatctaacactaagggagcgtggtgggagaaagaaa 604 Query: 326 tgag 329 |||| Sbjct: 605 tgag 608
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 301 bits (152), Expect = 1e-78 Identities = 245/276 (88%) Strand = Plus / Plus Query: 58 gggccctgctcgcatatcagtttctgtgcccaacctggatgaaggaaacttgcgaggcca 117 ||||||||||| ||| ||||| ||||| |||||||| |||||||||||| |||||||||| Sbjct: 8198380 gggccctgctcacatctcagtgtctgtacccaaccttgatgaaggaaacctgcgaggcca 8198439 Query: 118 agttttggagatctctgtccaatcactctcagacacaattggcagcctgaaggagcaggt 177 ||| ||||||||| |||||||||||||||||||||| ||||||| || ||||||||| | Sbjct: 8198440 agtgttggagatcggtgtccaatcactctcagacacagttggcagtctaaaggagcagat 8198499 Query: 178 tgctggagagctgcagcttcctgctaataagcagaagctgagtgtgaggactagtttcct 237 |||||||||| ||||||| |||||||||||||||||| |||| ||| ||||||||||||| Sbjct: 8198500 tgctggagagttgcagctccctgctaataagcagaagttgagcgtgcggactagtttcct 8198559 Query: 238 caaggacaatctttctcttgcctattacaatgttggccccggggtggtcatcaatctagc 297 ||| |||||||| ||||||| || ||||| ||||||| || ||||| |||||| || | Sbjct: 8198560 caaagacaatctcactcttgcttactacaacattggccctggagtggtgatcaatttaac 8198619 Query: 298 tctgagggagcgtggtgggagaaagaaatgagcttt 333 ||||||||||||||||||||||||||||||||||| Sbjct: 8198620 actgagggagcgtggtgggagaaagaaatgagcttt 8198655
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 301 bits (152), Expect = 1e-78 Identities = 245/276 (88%) Strand = Plus / Plus Query: 58 gggccctgctcgcatatcagtttctgtgcccaacctggatgaaggaaacttgcgaggcca 117 ||||||||||| ||| ||||| ||||| |||||||| |||||||||||| |||||||||| Sbjct: 30526 gggccctgctcacatctcagtgtctgtacccaaccttgatgaaggaaacctgcgaggcca 30585 Query: 118 agttttggagatctctgtccaatcactctcagacacaattggcagcctgaaggagcaggt 177 ||| ||||||||| |||||||||||||||||||||| ||||||| || ||||||||| | Sbjct: 30586 agtgttggagatcggtgtccaatcactctcagacacagttggcagtctaaaggagcagat 30645 Query: 178 tgctggagagctgcagcttcctgctaataagcagaagctgagtgtgaggactagtttcct 237 |||||||||| ||||||| |||||||||||||||||| |||| ||| ||||||||||||| Sbjct: 30646 tgctggagagttgcagctccctgctaataagcagaagttgagcgtgcggactagtttcct 30705 Query: 238 caaggacaatctttctcttgcctattacaatgttggccccggggtggtcatcaatctagc 297 ||| |||||||| ||||||| || ||||| ||||||| || ||||| |||||| || | Sbjct: 30706 caaagacaatctcactcttgcttactacaacattggccctggagtggtgatcaatttaac 30765 Query: 298 tctgagggagcgtggtgggagaaagaaatgagcttt 333 ||||||||||||||||||||||||||||||||||| Sbjct: 30766 actgagggagcgtggtgggagaaagaaatgagcttt 30801
>emb|AL023775.1|HS497J21 Human DNA sequence from clone RP3-497J21 on chromosome 6q26-27 Contains part of a variant of the RPS6KA2 gene for ribosomal protein S6 kinase, 90kD, polypeptide 2 (RSK3) and a IGF-II mRNA-binding protein 3 (KOC1) pseudogene, complete sequence Length = 129432 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 309 gtggtgggagaaagaaatgagct 331 ||||||||||||||||||||||| Sbjct: 7384 gtggtgggagaaagaaatgagct 7362
>gb|AF019664.1|AF019664 Homo sapiens cosmids 52b3, 189g5, ICRFc109N244QD2, P1 255h6, and PAC pDJ84g15 from chromosome 6q27 encompassing markers D6S193 and D6S297, complete sequence Length = 68940 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 309 gtggtgggagaaagaaatgagct 331 ||||||||||||||||||||||| Sbjct: 12366 gtggtgggagaaagaaatgagct 12388
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 ttcttgtattatgtgttttata 445 |||||||||||||||||||||| Sbjct: 1950082 ttcttgtattatgtgttttata 1950061
>gb|AC183335.3| Callithrix jacchus clone CH259-203J20, complete sequence Length = 54149 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 ttcttgtattatgtgttttata 445 |||||||||||||||||||||| Sbjct: 3508 ttcttgtattatgtgttttata 3487
>gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete sequence Length = 228448 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 ttcttgtattatgtgttttata 445 |||||||||||||||||||||| Sbjct: 226127 ttcttgtattatgtgttttata 226106
>gb|AY621040.1|AY621038S3 Pan troglodytes tafazzin (TAZ) gene, exons 6 through 11 and complete cds Length = 1578 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1531 ttgctgccttctggattcttg 1551
>gb|AY621049.1|AY621047S3 Hylobates sp. IGL-2004 tafazzin (TAZ) gene, exons 6 through 11 and complete cds Length = 1539 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1506 ttgctgccttctggattcttg 1526
>gb|AY621046.1|AY621044S3 Pongo pygmaeus tafazzin (TAZ) gene, exons 6 through 11 and complete cds Length = 1554 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1504 ttgctgccttctggattcttg 1524
>gb|AY621043.1|AY621041S3 Gorilla gorilla tafazzin (TAZ) gene, exons 6 through 11 and complete cds Length = 1588 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1552 ttgctgccttctggattcttg 1572
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 gcgtggtgggagaaagaaatg 327 ||||||||||||||||||||| Sbjct: 20285 gcgtggtgggagaaagaaatg 20305
>gb|AC005102.1| Homo sapiens BAC clone CTA-356E1 from 7, complete sequence Length = 106508 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 tgctgccttctggattcttgt 430 ||||||||||||||||||||| Sbjct: 19271 tgctgccttctggattcttgt 19291
>emb|BX936347.3| Human DNA sequence from clone WI2-83563B9 on chromosome X Contains the 3' end of the RPL10 gene for ribosomal protein L10, the DNASE1L1 gene for deoxyribonuclease I-like 1, the TAZ gene for tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome), the 5' end of the ATP6AP1 gene for H+ transporting ATPase lysosomal accessory protein 1 and two CpG islands, complete sequence Length = 37440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 23583 ttgctgccttctggattcttg 23603
>gb|BC011515.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome), mRNA (cDNA clone MGC:17101 IMAGE:4339983), complete cds Length = 1662 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 894 ttgctgccttctggattcttg 914
>gb|BC005062.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome), transcript variant 5, mRNA (cDNA clone IMAGE:3342887), complete cds Length = 1914 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1186 ttgctgccttctggattcttg 1206
>gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequence Length = 41724 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 agcgtggtgggagaaagaaatgagc 330 ||||||||||||||||||| ||||| Sbjct: 5317 agcgtggtgggagaaagaactgagc 5341
>emb|CR625532.1| full-length cDNA clone CS0DM002YI01 of Fetal liver of Homo sapiens (human) Length = 2225 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1577 ttgctgccttctggattcttg 1597
>emb|CR625491.1| full-length cDNA clone CS0DL002YB20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1677 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 996 ttgctgccttctggattcttg 1016
>emb|CR625386.1| full-length cDNA clone CS0DJ007YG17 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1739 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1045 ttgctgccttctggattcttg 1065
>emb|CR616010.1| full-length cDNA clone CS0DL008YM06 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1755 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1081 ttgctgccttctggattcttg 1101
>emb|CR606274.1| full-length cDNA clone CS0DC001YP13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1762 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1081 ttgctgccttctggattcttg 1101
>emb|CR600372.1| full-length cDNA clone CS0DK004YF20 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1781 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1085 ttgctgccttctggattcttg 1105
>emb|CR599136.1| full-length cDNA clone CS0DL007YP17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1722 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1041 ttgctgccttctggattcttg 1061
>emb|CR596174.1| full-length cDNA clone CS0DK011YJ18 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1615 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 922 ttgctgccttctggattcttg 942
>emb|CR590626.1| full-length cDNA clone CS0DB005YK23 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 987 ttgctgccttctggattcttg 1007
>ref|NM_181311.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 2, mRNA Length = 1814 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1100 ttgctgccttctggattcttg 1120
>ref|NM_181312.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 3, mRNA Length = 1862 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1148 ttgctgccttctggattcttg 1168
>ref|NM_181313.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 4, mRNA Length = 1772 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1058 ttgctgccttctggattcttg 1078
>ref|NM_181314.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 5, mRNA Length = 1934 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1206 ttgctgccttctggattcttg 1226
>ref|NM_000116.2| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 1, mRNA Length = 1904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1190 ttgctgccttctggattcttg 1210
>dbj|AK130900.1| Homo sapiens cDNA FLJ27390 fis, clone WMC00650, highly similar to Tafazzin Length = 2286 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1576 ttgctgccttctggattcttg 1596
>gb|L44140.1|HUMFLNG6PD Homo sapiens chromosome X region from filamin (FLN) gene to glucose-6-phosphate dehydrogenase (G6PD) gene, complete cds's Length = 219447 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 91442 ttgctgccttctggattcttg 91462
>emb|CR954185.2| Medicago truncatula chromosome 5 clone mth4-20m5, COMPLETE SEQUENCE Length = 210708 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 ctggattcttgtattatgtgtttta 443 |||||||||| |||||||||||||| Sbjct: 180751 ctggattcttttattatgtgtttta 180727
>emb|AL121576.5|CNS01DRW Human chromosome 14 DNA sequence BAC R-476J6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 221004 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 caaaacttcagtggctatcat 390 ||||||||||||||||||||| Sbjct: 173630 caaaacttcagtggctatcat 173650
>emb|X92764.1|HSG45611 H.sapiens G4.5 gene (exons 6-11) Length = 2307 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1599 ttgctgccttctggattcttg 1619
>emb|X92762.1|HSRNATAF H.sapiens mRNA for tafazzins protein Length = 1883 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 ttgctgccttctggattcttg 429 ||||||||||||||||||||| Sbjct: 1175 ttgctgccttctggattcttg 1195
>ref|NM_101332.3| Arabidopsis thaliana RNA binding AT1G14650 mRNA, complete cds Length = 2789 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 tgagggagcgtggtgggagaaaga 323 ||||||| |||||||||||||||| Sbjct: 2489 tgagggaacgtggtgggagaaaga 2512
>gb|AC158537.2| Mus musculus BAC clone RP23-2H7 from chromosome 14, complete sequence Length = 204554 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 aagcagaagctgagtgtgaggact 229 ||||||||||||||| |||||||| Sbjct: 55604 aagcagaagctgagtttgaggact 55627
>gb|AC154354.2| Mus musculus BAC clone RP23-203C5 from chromosome 14, complete sequence Length = 238278 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 aagcagaagctgagtgtgaggact 229 ||||||||||||||| |||||||| Sbjct: 234496 aagcagaagctgagtttgaggact 234519
>ref|XM_677012.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8835.2), mRNA Length = 3930 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 agcgtggtgggagaaagaaa 325 |||||||||||||||||||| Sbjct: 2654 agcgtggtgggagaaagaaa 2635
>gb|AC132297.4| Mus musculus chromosome 7 clone RP24-330M18, complete sequence Length = 152941 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 138237 ctggagagctgcagcttcct 138256
>ref|XM_548526.2| PREDICTED: Canis familiaris similar to immunoglobulin iota chain preproprotein (LOC491405), mRNA Length = 660 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gagctgcagcttcctgctaa 204 |||||||||||||||||||| Sbjct: 565 gagctgcagcttcctgctaa 584
>emb|CR382284.13| Zebrafish DNA sequence from clone DKEY-95H16 in linkage group 8, complete sequence Length = 205882 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ataagcagaagctgagtgtg 223 |||||||||||||||||||| Sbjct: 47582 ataagcagaagctgagtgtg 47563
>gb|AC123926.4| Mus musculus BAC clone RP24-326N11 from chromosome 16, complete sequence Length = 148820 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 agctgcagcttcctgctaataagc 209 |||||||||||||||||| ||||| Sbjct: 43569 agctgcagcttcctgctattaagc 43592
>gb|AC124403.3| Mus musculus BAC clone RP24-369I6 from chromosome 16, complete sequence Length = 159138 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 agctgcagcttcctgctaataagc 209 |||||||||||||||||| ||||| Sbjct: 152810 agctgcagcttcctgctattaagc 152833
>gb|AC124715.4| Mus musculus BAC clone RP24-130P22 from chromosome 14, complete sequence Length = 178742 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tgctggagagctgcagcttc 197 |||||||||||||||||||| Sbjct: 122106 tgctggagagctgcagcttc 122087
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence Length = 223991 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ctcaaggacaatctttctct 255 |||||||||||||||||||| Sbjct: 116704 ctcaaggacaatctttctct 116685
>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence Length = 227968 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 94559 ctggagagctgcagcttcct 94540
>gb|AC110221.6| Mus musculus chromosome 3, clone RP24-567P14, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 caagttttggagatctctgt 135 |||||||||||||||||||| Sbjct: 44223 caagttttggagatctctgt 44242
>emb|AL356111.13| Human DNA sequence from clone RP11-501G6 on chromosome 13 Contains a novel gene, complete sequence Length = 150955 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 tttacttacaggacaatgct 364 |||||||||||||||||||| Sbjct: 13077 tttacttacaggacaatgct 13058
>emb|AL031178.1|HS341E18 Human DNA sequence from clone RP3-341E18 on chromosome 6p11.2-12.3 Contains the KIAA0936 gene for a MAK-related kinase, a novel gene for NY-REN-57 antigen and CpG islands, complete sequence Length = 92558 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctgtgcccaacctggatgaa 100 |||||||||||||||||||| Sbjct: 8950 ctgtgcccaacctggatgaa 8969
>gb|AC018664.11| Homo sapiens chromosome 7 clone RP11-109E9, complete sequence Length = 114848 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 tggtgggagaaagaaatgag 329 |||||||||||||||||||| Sbjct: 29025 tggtgggagaaagaaatgag 29044
>emb|Y08028.1|MMART5 M.musculus ART5 gene Length = 984 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 916 ctggagagctgcagcttcct 897
>emb|AJ297548.1|MMU297548 Mus musculus mRNA for mono(ADP ribosyl)transferase (Art5 gene), splice variant 2 Length = 636 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 623 ctggagagctgcagcttcct 604
>emb|AJ297547.1|MMU297547 Mus musculus mRNA for mono(ADP ribosyl)transferase (Art5 gene), splice variant 1 Length = 495 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 482 ctggagagctgcagcttcct 463
>emb|AJ295722.1|MSP295722 Mus musculus Art5 gene for mono ADP ribosyl transferase, exons 1-6 Length = 2461 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 2161 ctggagagctgcagcttcct 2142
>emb|BX927104.11| Zebrafish DNA sequence from clone CH211-210P22 in linkage group 17, complete sequence Length = 146265 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 gcactataatttgcactatg 471 |||||||||||||||||||| Sbjct: 58369 gcactataatttgcactatg 58388
>emb|BX957247.4| Zebrafish DNA sequence from clone DKEYP-117H10 in linkage group 23, complete sequence Length = 166306 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 319 aaagaaatgagcttttcttatctcagtt 346 ||||||||||| ||||||||| |||||| Sbjct: 150964 aaagaaatgaggttttcttatttcagtt 150991
>emb|BX005275.25| Zebrafish DNA sequence from clone DKEY-118J18 in linkage group 24, complete sequence Length = 174489 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ataagcagaagctgagtgtg 223 |||||||||||||||||||| Sbjct: 39221 ataagcagaagctgagtgtg 39240
>gb|AY081293.1| Arabidopsis thaliana splicing factor, putative (At1g14650) mRNA, complete cds Length = 2740 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 tgagggagcgtggtgggagaaaga 323 ||||||| |||||||||||||||| Sbjct: 2454 tgagggaacgtggtgggagaaaga 2477
>dbj|AK132854.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930443I07 product:ADP-ribosyltransferase 5, full insert sequence Length = 1714 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 1467 ctggagagctgcagcttcct 1448
>gb|AC151970.5| Mus musculus BAC clone RP24-255F16 from chromosome 15, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ttgcttgtgcttcttaatat 503 |||||||||||||||||||| Sbjct: 52738 ttgcttgtgcttcttaatat 52757
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gagcgtggtgggagaaagaa 324 |||||||||||||||||||| Sbjct: 3605125 gagcgtggtgggagaaagaa 3605106
>emb|BX816195.1|CNS0AEGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1609 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 aagcagaagctgagtgtgag 225 |||||||||||||||||||| Sbjct: 779 aagcagaagctgagtgtgag 798
>gb|AC010657.3|AC010657 Genomic sequence for Arabidopsis thaliana BAC T5E21 from chromosome I, complete sequence Length = 83351 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 tgagggagcgtggtgggagaaaga 323 ||||||| |||||||||||||||| Sbjct: 67964 tgagggaacgtggtgggagaaaga 67987
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gagcgtggtgggagaaagaa 324 |||||||||||||||||||| Sbjct: 74442 gagcgtggtgggagaaagaa 74423
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gagcgtggtgggagaaagaa 324 |||||||||||||||||||| Sbjct: 143075 gagcgtggtgggagaaagaa 143056
>emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-566J3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185799 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cttcctgctaataagcagaa 213 |||||||||||||||||||| Sbjct: 148644 cttcctgctaataagcagaa 148625
>gb|U60881.1|MMU60881 Mus musculus Yac-2 NAD:arginine ADP-ribosyltransferase mRNA, complete cds Length = 1547 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 1299 ctggagagctgcagcttcct 1280
>ref|NM_007491.1| Mus musculus ADP-ribosyltransferase 5 (Art5), mRNA Length = 1849 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctggagagctgcagcttcct 199 |||||||||||||||||||| Sbjct: 1603 ctggagagctgcagcttcct 1584
>gb|AC140403.3| Mus musculus BAC clone RP23-144M22 from 15, complete sequence Length = 192144 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ttgcttgtgcttcttaatat 503 |||||||||||||||||||| Sbjct: 171354 ttgcttgtgcttcttaatat 171373
>dbj|AP004973.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT41A07, TM0155b, complete sequence Length = 52067 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ggactagtttcctcaaggac 244 |||||||||||||||||||| Sbjct: 2640 ggactagtttcctcaaggac 2621 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,675,825 Number of Sequences: 3902068 Number of extensions: 5675825 Number of successful extensions: 114047 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113848 Number of HSP's gapped (non-prelim): 199 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)