ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6o08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009081.1| Triticum aestivum clone wkm1c.pk0003.f4:fis, full insert mRNA sequence Length = 1373 Score = 1080 bits (545), Expect = 0.0 Identities = 592/608 (97%) Strand = Plus / Plus Query: 1 accgtcggcggcaatcgtgtgacgacgtaccgtggcctccccgncggtaacttggctgtt 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 114 accgtcggcggcaatcgtgtgacgacgtaccgtggcctccccgacggtaacttggctgtt 173 Query: 61 cttcaagcatacattgatggggacaatgctcagtcattctacaccctgagctgggcttgt 120 || |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||| Sbjct: 174 ctgcaagcatacattgatgcggacgatgctcagtcattctacactctgagctgggcttgt 233 Query: 121 gaccttgacggcacaccactgctagtggcagcaggaagcaatgcggtcattcgggtcatc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gaccttgacggcacaccactgctagtggcagcaggaagcaatgcggtcattcgggtcatc 293 Query: 181 aactgtgccaccgagaagttgtttaagacttttcttggccatggtgattcaataaatgag 240 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 294 aactgtgccaccgagaagttgtttaagagttttcttggccatggtgattcaataaatgag 353 Query: 241 ataagaactcaaccattgaagccttcactcttcatttctgcaagcaaggacgagtctgtt 300 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 354 ataagaactcaaccattgaagccttcgctcttcatttctgcaagcaaggacgagtctgtt 413 Query: 301 aggttatggaatgtccatacagggatctgcattttgatttttgctggaggaggaggtcac 360 ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 414 aggctatggaatgtccatacaggtatctgcatcttgatttttgctggaggaggaggtcac 473 Query: 361 cgtaatgaagtattgagtgttgacttccacccttctgatatctaccgaattgccagttgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 cgtaatgaagtattgagtgttgacttccacccttctgatatctaccgaattgccagttgt 533 Query: 421 ggcatggataatactgttaaaatctggtcaatgaaagaattttggccatacgtggagaaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 ggcatggataatactgttaaaatctggtcaatgaaagaattttggccatacgtggagaaa 593 Query: 481 tcctttacatggactgaccttccatcaaaatttccaacaaaatatgtccaatttccactt 540 |||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| || Sbjct: 594 tcctttacatggactgaccttccatcaaaatttccaacgaaatttgttcaatttccgctc 653 Query: 541 atgacttccgtggtgcattctaactatgttgactgtactaggtggcttggtgacttcatc 600 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 atgacttccgtggttcattctaactatgttgactgtactaggtggcttggtgacttcatc 713 Query: 601 ctgtcgaa 608 |||||||| Sbjct: 714 ctgtcgaa 721
>ref|XM_479986.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1994 Score = 591 bits (298), Expect = e-165 Identities = 481/542 (88%) Strand = Plus / Plus Query: 64 caagcatacattgatggggacaatgctcagtcattctacaccctgagctgggcttgtgac 123 |||||||| ||||||| ||| || | | | || |||||||| ||||| ||||||||||| Sbjct: 778 caagcatatattgatgaggataaggatgaatcgttctacacactgagttgggcttgtgat 837 Query: 124 cttgacggcacaccactgctagtggcagcaggaagcaatgcggtcattcgggtcatcaac 183 ||||| |||||||| ||| ||||||| ||||||||||||| | ||||||||||||||||| Sbjct: 838 cttgatggcacaccgctgttagtggctgcaggaagcaatgggatcattcgggtcatcaac 897 Query: 184 tgtgccaccgagaagttgtttaagacttttcttggccatggtgattcaataaatgagata 243 |||||||| |||||||| | ||||||||| |||||||||| ||||||||||| |||||| Sbjct: 898 tgtgccactgagaagttactcaagacttttgttggccatggcgattcaataaacgagata 957 Query: 244 agaactcaaccattgaagccttcactcttcatttctgcaagcaaggacgagtctgttagg 303 ||||||||| |||| |||||||| ||| ||||||||||||||||||| || ||||||||| Sbjct: 958 agaactcaagcattaaagccttcgctcatcatttctgcaagcaaggatgaatctgttagg 1017 Query: 304 ttatggaatgtccatacagggatctgcattttgatttttgctggaggaggaggtcaccgt 363 | |||||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1018 ctgtggaatgttcacacagggatctgcattttgatttttgctggagcaggaggtcaccgg 1077 Query: 364 aatgaagtattgagtgttgacttccacccttctgatatctaccgaattgccagttgtggc 423 ||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||| Sbjct: 1078 aatgaagtattgagtgttgacttccacccatctgatatctaccgcatagcaagttgtggc 1137 Query: 424 atggataatactgttaaaatctggtcaatgaaagaattttggccatacgtggagaaatcc 483 |||||||| ||||||||||| ||||||||||| ||||| |||||||| || ||| ||||| Sbjct: 1138 atggataacactgttaaaatatggtcaatgaaggaattctggccatatgttgagcaatcc 1197 Query: 484 tttacatggactgaccttccatcaaaatttccaacaaaatatgtccaatttccacttatg 543 |||||||||||||||||||||||||||||||||||||||||||| |||||||| | || Sbjct: 1198 tttacatggactgaccttccatcaaaatttccaacaaaatatgtgcaatttccggtcttg 1257 Query: 544 acttccgtggtgcattctaactatgttgactgtactaggtggcttggtgacttcatcctg 603 | | || || ||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 1258 gttgctgtagtacattctaactatgttgattgtactagatggcttggtgacttcattctg 1317 Query: 604 tc 605 || Sbjct: 1318 tc 1319
>dbj|AK111761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058F21, full insert sequence Length = 1994 Score = 591 bits (298), Expect = e-165 Identities = 481/542 (88%) Strand = Plus / Plus Query: 64 caagcatacattgatggggacaatgctcagtcattctacaccctgagctgggcttgtgac 123 |||||||| ||||||| ||| || | | | || |||||||| ||||| ||||||||||| Sbjct: 778 caagcatatattgatgaggataaggatgaatcgttctacacactgagttgggcttgtgat 837 Query: 124 cttgacggcacaccactgctagtggcagcaggaagcaatgcggtcattcgggtcatcaac 183 ||||| |||||||| ||| ||||||| ||||||||||||| | ||||||||||||||||| Sbjct: 838 cttgatggcacaccgctgttagtggctgcaggaagcaatgggatcattcgggtcatcaac 897 Query: 184 tgtgccaccgagaagttgtttaagacttttcttggccatggtgattcaataaatgagata 243 |||||||| |||||||| | ||||||||| |||||||||| ||||||||||| |||||| Sbjct: 898 tgtgccactgagaagttactcaagacttttgttggccatggcgattcaataaacgagata 957 Query: 244 agaactcaaccattgaagccttcactcttcatttctgcaagcaaggacgagtctgttagg 303 ||||||||| |||| |||||||| ||| ||||||||||||||||||| || ||||||||| Sbjct: 958 agaactcaagcattaaagccttcgctcatcatttctgcaagcaaggatgaatctgttagg 1017 Query: 304 ttatggaatgtccatacagggatctgcattttgatttttgctggaggaggaggtcaccgt 363 | |||||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1018 ctgtggaatgttcacacagggatctgcattttgatttttgctggagcaggaggtcaccgg 1077 Query: 364 aatgaagtattgagtgttgacttccacccttctgatatctaccgaattgccagttgtggc 423 ||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||| Sbjct: 1078 aatgaagtattgagtgttgacttccacccatctgatatctaccgcatagcaagttgtggc 1137 Query: 424 atggataatactgttaaaatctggtcaatgaaagaattttggccatacgtggagaaatcc 483 |||||||| ||||||||||| ||||||||||| ||||| |||||||| || ||| ||||| Sbjct: 1138 atggataacactgttaaaatatggtcaatgaaggaattctggccatatgttgagcaatcc 1197 Query: 484 tttacatggactgaccttccatcaaaatttccaacaaaatatgtccaatttccacttatg 543 |||||||||||||||||||||||||||||||||||||||||||| |||||||| | || Sbjct: 1198 tttacatggactgaccttccatcaaaatttccaacaaaatatgtgcaatttccggtcttg 1257 Query: 544 acttccgtggtgcattctaactatgttgactgtactaggtggcttggtgacttcatcctg 603 | | || || ||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 1258 gttgctgtagtacattctaactatgttgattgtactagatggcttggtgacttcattctg 1317 Query: 604 tc 605 || Sbjct: 1318 tc 1319
>gb|AY061965.1| Zea mays fertilization-independent endosperm protein (FIE2) mRNA, complete cds Length = 1711 Score = 446 bits (225), Expect = e-122 Identities = 467/547 (85%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 59 ttcttcaagcatacattgatggggacaatgctcagtcattctacaccctgagctgggctt 118 |||| ||||| ||| |||||| ||| || | | |||| ||||| || || ||||||||| Sbjct: 623 ttctacaagcttacgttgatgaggataaggatgagtcgttctatactctaagctgggctc 682 Query: 119 gtgacc---ttgacggcacaccactgctagtggcagcaggaagcaatgcggtcattcggg 175 |||||| |||| ||| |||||||||| ||||||||||||||||||| | ||||||||| Sbjct: 683 gtgaccatgttgatggctcaccactgctggtggcagcaggaagcaatgggatcattcggg 742 Query: 176 tcatcaactgtgccaccgagaagttgtttaagacttttcttggccatggtgattcaataa 235 ||||||| ||||| || || ||||| ||||| ||| |||||||||| || ||||||| Sbjct: 743 tcatcaattgtgctacagaaaagttagctaagagctttgttggccatggcgactcaataa 802 Query: 236 atgagataagaactcaaccattgaagccttcactcttcatttctgcaagcaaggacgagt 295 ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || | Sbjct: 803 atgagataagaactcaaccgttgaagccttcgctcatcatttctgcaagcaaggatgaat 862 Query: 296 ctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggaggag 355 |||||||| ||||||||||||||||||||||||| || ||||| |||||||||| |||| Sbjct: 863 ctgttaggctatggaatgtccatacagggatctgtatcttgatatttgctggagctggag 922 Query: 356 gtcaccgtaatgaagtattgagtgttgacttccacccttctgatatctaccgaattgcca 415 |||| || |||||||||||||||||||||||||| ||| |||||| | || |||| | Sbjct: 923 gtcatcgcaatgaagtattgagtgttgacttccatcctagtgatattgaacgttttgcaa 982 Query: 416 gttgtggcatggataatactgttaaaatctggtcaatgaaagaattttggccatacgtgg 475 ||||||||||||| || ||||| |||||||||||||||||||||||||||| ||| || | Sbjct: 983 gttgtggcatggacaacactgtgaaaatctggtcaatgaaagaattttggctatatgttg 1042 Query: 476 agaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtccaatttc 535 | ||||| | | |||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1043 acaaatcatattcatggactgaccttccatcaaagtttccaacaaaatatgtccagtttc 1102 Query: 536 cacttatgacttccgtggtgcattctaactatgttgactgtactaggtggcttggtgact 595 || | ||| | | | || || |||||||||||||| ||||| || ||||||||||||| Sbjct: 1103 cagtcttgattgctgcagtacactctaactatgttgattgtacaagatggcttggtgact 1162 Query: 596 tcatcct 602 ||||||| Sbjct: 1163 tcatcct 1169
>gb|AY195849.1| Zea mays fertilization-independent type 1 mRNA, complete cds Length = 1438 Score = 446 bits (225), Expect = e-122 Identities = 467/547 (85%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 59 ttcttcaagcatacattgatggggacaatgctcagtcattctacaccctgagctgggctt 118 |||| ||||| ||| |||||| ||| || | | |||| ||||| || || ||||||||| Sbjct: 233 ttctacaagcttacgttgatgaggataaggatgagtcgttctatactctaagctgggctc 292 Query: 119 gtgacc---ttgacggcacaccactgctagtggcagcaggaagcaatgcggtcattcggg 175 |||||| |||| ||| |||||||||| ||||||||||||||||||| | ||||||||| Sbjct: 293 gtgaccatgttgatggctcaccactgctggtggcagcaggaagcaatgggatcattcggg 352 Query: 176 tcatcaactgtgccaccgagaagttgtttaagacttttcttggccatggtgattcaataa 235 ||||||| ||||| || || ||||| ||||| ||| |||||||||| || ||||||| Sbjct: 353 tcatcaattgtgctacagaaaagttagctaagagctttgttggccatggcgactcaataa 412 Query: 236 atgagataagaactcaaccattgaagccttcactcttcatttctgcaagcaaggacgagt 295 ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || | Sbjct: 413 atgagataagaactcaaccgttgaagccttcgctcatcatttctgcaagcaaggatgaat 472 Query: 296 ctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggaggag 355 |||||||| ||||||||||||||||||||||||| || ||||| |||||||||| |||| Sbjct: 473 ctgttaggctatggaatgtccatacagggatctgtatcttgatatttgctggagctggag 532 Query: 356 gtcaccgtaatgaagtattgagtgttgacttccacccttctgatatctaccgaattgcca 415 |||| || |||||||||||||||||||||||||| ||| |||||| | || |||| | Sbjct: 533 gtcatcgcaatgaagtattgagtgttgacttccatcctagtgatattgaacgttttgcaa 592 Query: 416 gttgtggcatggataatactgttaaaatctggtcaatgaaagaattttggccatacgtgg 475 ||||||||||||| || ||||| |||||||||||||||||||||||||||| ||| || | Sbjct: 593 gttgtggcatggacaacactgtgaaaatctggtcaatgaaagaattttggctatatgttg 652 Query: 476 agaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtccaatttc 535 | ||||| | | |||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 653 acaaatcatattcatggactgaccttccatcaaagtttccaacaaaatatgtccagtttc 712 Query: 536 cacttatgacttccgtggtgcattctaactatgttgactgtactaggtggcttggtgact 595 || | ||| | | | || || |||||||||||||| ||||| || ||||||||||||| Sbjct: 713 cagtcttgattgctgcagtacactctaactatgttgattgtacaagatggcttggtgact 772 Query: 596 tcatcct 602 ||||||| Sbjct: 773 tcatcct 779
>gb|AY150644.1| Zea mays fertilization-independent endosperm protein 2 mRNA, complete cds Length = 1650 Score = 446 bits (225), Expect = e-122 Identities = 467/547 (85%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 59 ttcttcaagcatacattgatggggacaatgctcagtcattctacaccctgagctgggctt 118 |||| ||||| ||| |||||| ||| || | | |||| ||||| || || ||||||||| Sbjct: 429 ttctacaagcttacgttgatgaggataaggatgagtcgttctatactctaagctgggctc 488 Query: 119 gtgacc---ttgacggcacaccactgctagtggcagcaggaagcaatgcggtcattcggg 175 |||||| |||| ||| |||||||||| ||||||||||||||||||| | ||||||||| Sbjct: 489 gtgaccatgttgatggctcaccactgctggtggcagcaggaagcaatgggatcattcggg 548 Query: 176 tcatcaactgtgccaccgagaagttgtttaagacttttcttggccatggtgattcaataa 235 ||||||| ||||| || || ||||| ||||| ||| |||||||||| || ||||||| Sbjct: 549 tcatcaattgtgctacagaaaagttagctaagagctttgttggccatggcgactcaataa 608 Query: 236 atgagataagaactcaaccattgaagccttcactcttcatttctgcaagcaaggacgagt 295 ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || | Sbjct: 609 atgagataagaactcaaccgttgaagccttcgctcatcatttctgcaagcaaggatgaat 668 Query: 296 ctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggaggag 355 |||||||| ||||||||||||||||||||||||| || ||||| |||||||||| |||| Sbjct: 669 ctgttaggctatggaatgtccatacagggatctgtatcttgatatttgctggagctggag 728 Query: 356 gtcaccgtaatgaagtattgagtgttgacttccacccttctgatatctaccgaattgcca 415 |||| || |||||||||||||||||||||||||| ||| |||||| | || |||| | Sbjct: 729 gtcatcgcaatgaagtattgagtgttgacttccatcctagtgatattgaacgttttgcaa 788 Query: 416 gttgtggcatggataatactgttaaaatctggtcaatgaaagaattttggccatacgtgg 475 ||||||||||||| || ||||| |||||||||||||||||||||||||||| ||| || | Sbjct: 789 gttgtggcatggacaacactgtgaaaatctggtcaatgaaagaattttggctatatgttg 848 Query: 476 agaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtccaatttc 535 | ||||| | | |||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 849 acaaatcatattcatggactgaccttccatcaaagtttccaacaaaatatgtccagtttc 908 Query: 536 cacttatgacttccgtggtgcattctaactatgttgactgtactaggtggcttggtgact 595 || | ||| | | | || || |||||||||||||| ||||| || ||||||||||||| Sbjct: 909 cagtcttgattgctgcagtacactctaactatgttgattgtacaagatggcttggtgact 968 Query: 596 tcatcct 602 ||||||| Sbjct: 969 tcatcct 975
>gb|AY103723.1| Zea mays PCO096803 mRNA sequence Length = 1711 Score = 446 bits (225), Expect = e-122 Identities = 467/547 (85%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 59 ttcttcaagcatacattgatggggacaatgctcagtcattctacaccctgagctgggctt 118 |||| ||||| ||| |||||| ||| || | | |||| ||||| || || ||||||||| Sbjct: 623 ttctacaagcttacgttgatgaggataaggatgagtcgttctatactctaagctgggctc 682 Query: 119 gtgacc---ttgacggcacaccactgctagtggcagcaggaagcaatgcggtcattcggg 175 |||||| |||| ||| |||||||||| ||||||||||||||||||| | ||||||||| Sbjct: 683 gtgaccatgttgatggctcaccactgctggtggcagcaggaagcaatgggatcattcggg 742 Query: 176 tcatcaactgtgccaccgagaagttgtttaagacttttcttggccatggtgattcaataa 235 ||||||| ||||| || || ||||| ||||| ||| |||||||||| || ||||||| Sbjct: 743 tcatcaattgtgctacagaaaagttagctaagagctttgttggccatggcgactcaataa 802 Query: 236 atgagataagaactcaaccattgaagccttcactcttcatttctgcaagcaaggacgagt 295 ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || | Sbjct: 803 atgagataagaactcaaccgttgaagccttcgctcatcatttctgcaagcaaggatgaat 862 Query: 296 ctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggaggag 355 |||||||| ||||||||||||||||||||||||| || ||||| |||||||||| |||| Sbjct: 863 ctgttaggctatggaatgtccatacagggatctgtatcttgatatttgctggagctggag 922 Query: 356 gtcaccgtaatgaagtattgagtgttgacttccacccttctgatatctaccgaattgcca 415 |||| || |||||||||||||||||||||||||| ||| |||||| | || |||| | Sbjct: 923 gtcatcgcaatgaagtattgagtgttgacttccatcctagtgatattgaacgttttgcaa 982 Query: 416 gttgtggcatggataatactgttaaaatctggtcaatgaaagaattttggccatacgtgg 475 ||||||||||||| || ||||| |||||||||||||||||||||||||||| ||| || | Sbjct: 983 gttgtggcatggacaacactgtgaaaatctggtcaatgaaagaattttggctatatgttg 1042 Query: 476 agaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtccaatttc 535 | ||||| | | |||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1043 acaaatcatattcatggactgaccttccatcaaagtttccaacaaaatatgtccagtttc 1102 Query: 536 cacttatgacttccgtggtgcattctaactatgttgactgtactaggtggcttggtgact 595 || | ||| | | | || || |||||||||||||| ||||| || ||||||||||||| Sbjct: 1103 cagtcttgattgctgcagtacactctaactatgttgattgtacaagatggcttggtgact 1162 Query: 596 tcatcct 602 ||||||| Sbjct: 1163 tcatcct 1169
>ref|XM_479988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 272 bits (137), Expect = 1e-69 Identities = 368/445 (82%) Strand = Plus / Plus Query: 92 agtcattctacaccctgagctgggcttgtgaccttgacggcacaccactgctagtggcag 151 ||||||||| ||| ||||||||||||| ||| |||| |||| ||| || |||| || | Sbjct: 509 agtcattcttcactgtgagctgggcttgcgacattgatggcaatccattgttagtagctg 568 Query: 152 caggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaagttgtttaagactt 211 ||||||||| || ||||||| ||||||||||||||||| |||||| | | ||||| | Sbjct: 569 caggaagcactggaatcattcgagtcatcaactgtgccactgagaagatatataagagtc 628 Query: 212 ttcttggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactct 271 || |||||||||||| |||| |||| || |||| ||||||||| ||| ||||||||| Sbjct: 629 ttgttggccatggtggttcagtaaacgaaataaagtctcaaccatcgaatccttcactca 688 Query: 272 tcatttctgcaagcaaggacgagtctgttaggttatggaatgtccatacagggatctgca 331 ||||||||||||||||||| || ||| ||| | | |||||||| || |||||||||| | Sbjct: 689 tcatttctgcaagcaaggatgaatctattaagctgtggaatgtgcagacagggatcttaa 748 Query: 332 ttttgatttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgacttccacc 391 ||||| |||||| ||||| |||||||||||| | |||||| | |||||||||||||| Sbjct: 749 ttttggtttttggtggagtaggaggtcaccgacacgaagtacttggtgttgacttccaca 808 Query: 392 cttctgatatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaa 451 | |||||||||||||| || |||||||| ||||| || ||||| | ||||||||||| Sbjct: 809 catctgatatctaccgctttttaagttgtggaatggacaacactgtgagaatctggtcaa 868 Query: 452 tgaaagaattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaat 511 |||||||||| ||| ||| || |||||||||| | |||||||||| | ||||||||| Sbjct: 869 tgaaagaattctgggaatatgttgagaaatcctattcatggactgatgctacatcaaaat 928 Query: 512 ttccaacaaaatatgtccaatttcc 536 |||||||||||| |||||||||||| Sbjct: 929 ttccaacaaaatttgtccaatttcc 953 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 556 cattctaactatgttgactgtactaggtggcttggtgacttcatcctgtc 605 |||||||||||||| |||||||||| |||||||| ||||| ||||||| Sbjct: 973 cattctaactatgtagactgtactaaatggcttggggactttgtcctgtc 1022
>gb|AY150283.1| Eucalyptus grandis fertilization independent endosperm development protein mRNA, complete cds Length = 1626 Score = 176 bits (89), Expect = 6e-41 Identities = 263/321 (81%) Strand = Plus / Plus Query: 217 ggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactcttcatt 276 |||||||| |||||||||||||| || || |||||||||||||| || || ||| || | Sbjct: 498 ggccatggggattcaataaatgaaatcaggactcaaccattgaacccatccctcatcgtg 557 Query: 277 tctgcaagcaaggacgagtctgttaggttatggaatgtccatacagggatctgcattttg 336 ||||| ||||| || || || |||||| | ||||| || ||||| || || || || || Sbjct: 558 tctgctagcaaagatgaatccgttaggctctggaacgttcatacgggaatttgtatcctg 617 Query: 337 atttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgacttccacccttct 396 || |||||||||| || ||||| || |||||||| |||||||| |||||||| ||||| Sbjct: 618 atatttgctggagctgggggtcatcgcaatgaagttttgagtgtggacttccatccttcc 677 Query: 397 gatatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaatgaaa 456 || | ||||| ||||| |||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 678 gacaagtaccgtattgcaagttgtggtatggacaatacggttaaaatctggtcaatgaaa 737 Query: 457 gaattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttcca 516 || || ||| |||| |||||||| || ||||||||||| || |||||||| || ||||| Sbjct: 738 gagttctggacatatgtggagaagtcatttacatggacagatcttccatcgaagtttccc 797 Query: 517 acaaaatatgtccaatttcca 537 || ||||| || || |||||| Sbjct: 798 accaaatacgtgcagtttcca 818 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 556 cattctaactatgttgactgtactaggtggcttggtga 593 ||||| |||||||||||||| | |||||||||||||| Sbjct: 837 cattcaaactatgttgactgcaacaggtggcttggtga 874
>gb|BT014078.1| Lycopersicon esculentum clone 133178F, mRNA sequence Length = 1649 Score = 168 bits (85), Expect = 1e-38 Identities = 217/261 (83%) Strand = Plus / Plus Query: 277 tctgcaagcaaggacgagtctgttaggttatggaatgtccatacagggatctgcattttg 336 ||||| ||||| || || |||||| | || |||||||| ||||| || || ||||||||| Sbjct: 529 tctgccagcaaagatgaatctgttcgcttgtggaatgttcatactggaatatgcattttg 588 Query: 337 atttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgacttccacccttct 396 | |||||||| | |||||||| || ||||||||| | ||||| |||||||| ||| || Sbjct: 589 gtatttgctggcgctggaggtcatcggaatgaagtacttagtgtggacttccatcctact 648 Query: 397 gatatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaatgaaa 456 ||||| || || ||||| || ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 649 gatatatatcggattgctagctgtggaatggataacactgttaagatctggtcaatgaaa 708 Query: 457 gaattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttcca 516 ||||| ||| |||| ||||||||||| ||||| ||||| || ||||| || || ||||| Sbjct: 709 gaattctggacatatgtggagaaatcgtttacttggacggatcttccttccaagtttccc 768 Query: 517 acaaaatatgtccaatttcca 537 ||||||||||| || |||||| Sbjct: 769 acaaaatatgtacagtttcca 789
>gb|AY150282.1| Catalpa speciosa fertilization independent endosperm development protein mRNA, complete cds Length = 1368 Score = 153 bits (77), Expect = 8e-34 Identities = 185/221 (83%) Strand = Plus / Plus Query: 307 tggaatgtccatacagggatctgcattttgatttttgctggaggaggaggtcaccgtaat 366 |||||| | ||||| ||||| ||||||||||| ||| |||| | || ||||| || ||| Sbjct: 447 tggaatattcatactgggatatgcattttgatattttctggtgctggtggtcatcgcaat 506 Query: 367 gaagtattgagtgttgacttccacccttctgatatctaccgaattgccagttgtggcatg 426 ||||| | ||||| |||||||| |||||||| |||||||| ||||| || ||||| ||| Sbjct: 507 gaagttcttagtgtggacttccatccttctgacatctaccgtattgcaagctgtggaatg 566 Query: 427 gataatactgttaaaatctggtcaatgaaagaattttggccatacgtggagaaatccttt 486 ||||| ||||| || |||||||||||||||||||||||| |||| || |||||||| ||| Sbjct: 567 gataacactgtcaagatctggtcaatgaaagaattttggacatatgtagagaaatctttt 626 Query: 487 acatggactgaccttccatcaaaatttccaacaaaatatgt 527 || |||||||| ||||| || || || || ||||||||||| Sbjct: 627 acttggactgatcttccttctaagttccccacaaaatatgt 667
>gb|AY061964.1| Zea mays fertilization-independent endosperm protein (FIE1) mRNA, complete cds Length = 1787 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Plus Query: 145 gtggcagcaggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaagttgttt 204 ||||| |||||||||||| | |||||||||||||||| ||||| ||||| ||||| | Sbjct: 661 gtggccgcaggaagcaatcggatcattcgggtcatcaattgtgctaccgaaaagttagat 720 Query: 205 aagacttttcttggccatggtgattcaataaatgagataagaactcaaccattgaagcct 264 |||| || |||||||||||| ||||||| |||||||||| ||||| | | |||||| Sbjct: 721 aagagcttagttggccatggtggttcaatacatgagataaggactcatgcctcgaagcca 780 Query: 265 tcactcttcatttctgcaagcaaggacgagtctgttaggttatggaatgtccatacaggg 324 |||||| |||||||||| |||||||| || ||| ||||| |||||||||||||||| ||| Sbjct: 781 tcactcatcatttctgccagcaaggatgaatctattaggctatggaatgtccatactggg 840 Query: 325 atctgcattttgatttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgac 384 || ||||| || | ||||| || | ||||| || || |||| || |||||||||||| Sbjct: 841 atttgcatcttagtctttgcaggggctggaggccatcgacatgatgtgttgagtgttgac 900 Query: 385 ttccaccct 393 ||||||||| Sbjct: 901 ttccaccct 909 Score = 105 bits (53), Expect = 2e-19 Identities = 158/193 (81%) Strand = Plus / Plus Query: 410 ttgccagttgtggcatggataatactgttaaaatctggtcaatgaaagaattttggccat 469 |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| || Sbjct: 926 ttgcaagttgtggcatggacaatactgtgaaaatttggtcaatgaaagaattttggatat 985 Query: 470 acgtggagaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtcc 529 | || || ||||| | | ||||||||| || ||||||||| |||||||| | || ||| Sbjct: 986 atgttgaaaaatcatattcatggactggccatccatcaaagtttccaacgaggaatatcc 1045 Query: 530 aatttccacttatgacttccgtggtgcattctaactatgttgactgtactaggtggcttg 589 | ||||| | ||||| | | || || ||| |||||||||| ||||| || ||||||| Sbjct: 1046 agtttccggtcttgactgctgcagtacactctgactatgttgattgtacaagatggcttg 1105 Query: 590 gtgacttcatcct 602 ||||||||||||| Sbjct: 1106 gtgacttcatcct 1118
>gb|BT024091.1| Zea mays clone EL01N0552F10 mRNA sequence Length = 1772 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Plus Query: 145 gtggcagcaggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaagttgttt 204 ||||| |||||||||||| | |||||||||||||||| ||||| ||||| ||||| | Sbjct: 635 gtggccgcaggaagcaatcggatcattcgggtcatcaattgtgctaccgaaaagttagat 694 Query: 205 aagacttttcttggccatggtgattcaataaatgagataagaactcaaccattgaagcct 264 |||| || |||||||||||| ||||||| |||||||||| ||||| | | |||||| Sbjct: 695 aagagcttagttggccatggtggttcaatacatgagataaggactcatgcctcgaagccg 754 Query: 265 tcactcttcatttctgcaagcaaggacgagtctgttaggttatggaatgtccatacaggg 324 |||||| |||||||||| |||||||| || ||| ||||| |||||||||||||||| ||| Sbjct: 755 tcactcatcatttctgccagcaaggatgaatctattaggctatggaatgtccatactggg 814 Query: 325 atctgcattttgatttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgac 384 || ||||| || | ||||| || | ||||| || || |||| || |||||||||||| Sbjct: 815 atttgcatcttagtctttgcaggggctggaggccatcgacatgatgtgttgagtgttgac 874 Query: 385 ttccaccct 393 ||||||||| Sbjct: 875 ttccaccct 883 Score = 113 bits (57), Expect = 7e-22 Identities = 159/193 (82%) Strand = Plus / Plus Query: 410 ttgccagttgtggcatggataatactgttaaaatctggtcaatgaaagaattttggccat 469 |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| || Sbjct: 900 ttgcaagttgtggcatggacaatactgtgaaaatttggtcaatgaaagaattttggatat 959 Query: 470 acgtggagaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtcc 529 | || || ||||| | | |||||||||||| ||||||||| |||||||| | || ||| Sbjct: 960 atgttgaaaaatcatattcatggactgaccatccatcaaagtttccaacgaggaatatcc 1019 Query: 530 aatttccacttatgacttccgtggtgcattctaactatgttgactgtactaggtggcttg 589 | ||||| | ||||| | | || || ||| |||||||||| ||||| || ||||||| Sbjct: 1020 agtttccggtcttgactgctgcagtacactctgactatgttgattgtacaagatggcttg 1079 Query: 590 gtgacttcatcct 602 ||||||||||||| Sbjct: 1080 gtgacttcatcct 1092
>gb|AY112526.1| Zea mays CL600_7 mRNA sequence Length = 1744 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Plus Query: 145 gtggcagcaggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaagttgttt 204 ||||| |||||||||||| | |||||||||||||||| ||||| ||||| ||||| | Sbjct: 623 gtggccgcaggaagcaatcggatcattcgggtcatcaattgtgctaccgaaaagttagat 682 Query: 205 aagacttttcttggccatggtgattcaataaatgagataagaactcaaccattgaagcct 264 |||| || |||||||||||| ||||||| |||||||||| ||||| | | |||||| Sbjct: 683 aagagcttagttggccatggtggttcaatacatgagataaggactcatgcctcgaagcca 742 Query: 265 tcactcttcatttctgcaagcaaggacgagtctgttaggttatggaatgtccatacaggg 324 |||||| |||||||||| |||||||| || ||| ||||| |||||||||||||||| ||| Sbjct: 743 tcactcatcatttctgccagcaaggatgaatctattaggctatggaatgtccatactggg 802 Query: 325 atctgcattttgatttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgac 384 || ||||| || | ||||| || | ||||| || || |||| || |||||||||||| Sbjct: 803 atttgcatcttagtctttgcaggggctggaggccatcgacatgatgtgttgagtgttgac 862 Query: 385 ttccaccct 393 ||||||||| Sbjct: 863 ttccaccct 871 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 415 agttgtggcatggataatactgttaaaatctggtcaatgaaagaattttgg 465 |||||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 893 agttgtggcatggacaatactgtgaaaatttggtcaatgaaagaattttgg 943 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 563 actatgttgactgtactaggtggcttggtgacttcatcct 602 |||||||||| ||||| || |||||||||||||||||||| Sbjct: 1041 actatgttgattgtacaagatggcttggtgacttcatcct 1080
>gb|AY195850.1| Zea mays fertilization-independent type 2 mRNA, complete cds Length = 1780 Score = 137 bits (69), Expect = 5e-29 Identities = 204/249 (81%) Strand = Plus / Plus Query: 145 gtggcagcaggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaagttgttt 204 ||||| |||||||||||| |||||||||||||||| ||||| ||||| ||||| | Sbjct: 639 gtggccgcaggaagcaatcgaatcattcgggtcatcaattgtgctaccgaaaagttaaat 698 Query: 205 aagacttttcttggccatggtgattcaataaatgagataagaactcaaccattgaagcct 264 |||| || |||||||||||| ||||||| |||||||||| ||||| | | |||||| Sbjct: 699 aagagcttagttggccatggtggttcaatacatgagataaggactcatgcctcgaagccg 758 Query: 265 tcactcttcatttctgcaagcaaggacgagtctgttaggttatggaatgtccatacaggg 324 |||||| |||||||||| |||||||| || ||| ||||| |||||||||||||||| ||| Sbjct: 759 tcactcatcatttctgctagcaaggatgaatctattaggctatggaatgtccatactggg 818 Query: 325 atctgcattttgatttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgac 384 || ||||| || | ||||| || | ||||| || || |||| || |||||||||||| Sbjct: 819 atttgcatcttagtctttgcaggggctggaggccatcgacatgatgtgttgagtgttgac 878 Query: 385 ttccaccct 393 ||||||||| Sbjct: 879 ttccaccct 887 Score = 113 bits (57), Expect = 7e-22 Identities = 159/193 (82%) Strand = Plus / Plus Query: 410 ttgccagttgtggcatggataatactgttaaaatctggtcaatgaaagaattttggccat 469 |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| || Sbjct: 904 ttgcaagttgtggcatggacaatactgtgaaaatttggtcaatgaaagaattttggatat 963 Query: 470 acgtggagaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtcc 529 | || || ||||| | | |||||||||||| ||||||||| |||||||| | || ||| Sbjct: 964 atgttgaaaaatcatattcatggactgaccatccatcaaagtttccaacgaggaatatcc 1023 Query: 530 aatttccacttatgacttccgtggtgcattctaactatgttgactgtactaggtggcttg 589 | ||||| | ||||| | | || || ||| |||||||||| ||||| || ||||||| Sbjct: 1024 agtttccggtcttgactgctgcagtacactctgactatgttgattgtacaagatggcttg 1083 Query: 590 gtgacttcatcct 602 ||||||||||||| Sbjct: 1084 gtgacttcatcct 1096
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 295 tctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggagga 354 ||||||||| | |||||||| || ||||||||||||||||||||||||||||||| |||| Sbjct: 2074721 tctgttaggctgtggaatgttcacacagggatctgcattttgatttttgctggagcagga 2074780 Query: 355 ggtcaccgtaatgaagtattgagtgttg 382 |||||||| ||||||||||||||||||| Sbjct: 2074781 ggtcaccggaatgaagtattgagtgttg 2074808 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 97 ttctacaccctgagctgggcttgtgaccttgacggcacaccactgctagtggcagcagga 156 |||||||| ||||| ||||||||||| ||||| |||||||| ||| ||||||| |||||| Sbjct: 2073767 ttctacacactgagttgggcttgtgatcttgatggcacaccgctgttagtggctgcagga 2073826 Query: 157 agcaatgcggtcattcgggtcatcaactgtgccaccgagaagtt 200 ||||||| | ||||||||||||||||||||||||| |||||||| Sbjct: 2073827 agcaatgggatcattcgggtcatcaactgtgccactgagaagtt 2073870 Score = 121 bits (61), Expect = 3e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 456 agaattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttcc 515 |||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2075180 agaattctggccatatgttgagcaatcctttacatggactgaccttccatcaaaatttcc 2075239 Query: 516 aacaaaatatgtccaatttcc 536 |||||||||||| |||||||| Sbjct: 2075240 aacaaaatatgtgcaatttcc 2075260 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 206 agacttttcttggccatggtgattcaataaatgagataagaactcaaccattgaagcctt 265 |||||||| |||||||||| ||||||||||| ||||||||||||||| |||| ||||||| Sbjct: 2074553 agacttttgttggccatggcgattcaataaacgagataagaactcaagcattaaagcctt 2074612 Query: 266 cactcttcatttctgcaagcaagg 289 | ||| |||||||||||||||||| Sbjct: 2074613 cgctcatcatttctgcaagcaagg 2074636 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 382 gacttccacccttctgatatctaccgaattgccagttgtggcatggataatactgttaaa 441 ||||||||||| |||||||||||||| || || ||||||||||||||||| ||||||||| Sbjct: 2075023 gacttccacccatctgatatctaccgcatagcaagttgtggcatggataacactgttaaa 2075082 Query: 442 atctggtcaatgaa 455 || ||||||||||| Sbjct: 2075083 atatggtcaatgaa 2075096 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 556 cattctaactatgttgactgtactaggtggcttggtgacttcatcctgtc 605 ||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 2075377 cattctaactatgttgattgtactagatggcttggtgacttcattctgtc 2075426 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 215 ttggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactcttca 274 |||||||||||| |||| |||| || |||| ||||||||| ||| ||||||||| ||| Sbjct: 2091612 ttggccatggtggttcagtaaacgaaataaagtctcaaccatcgaatccttcactcatca 2091671 Query: 275 tttctgcaagcaagg 289 ||||||||||||||| Sbjct: 2091672 tttctgcaagcaagg 2091686 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 92 agtcattctacaccctgagctgggcttgtgaccttgacggcacaccactgctagtggcag 151 ||||||||| ||| ||||||||||||| ||| |||| |||| ||| || |||| || | Sbjct: 2091074 agtcattcttcactgtgagctgggcttgcgacattgatggcaatccattgttagtagctg 2091133 Query: 152 caggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaag 198 ||||||||| || ||||||| ||||||||||||||||| |||||| Sbjct: 2091134 caggaagcactggaatcattcgagtcatcaactgtgccactgagaag 2091180 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 475 gagaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtccaattt 534 |||||||||| | |||||||||| | ||||||||||||||||||||| |||||||||| Sbjct: 2092272 gagaaatcctattcatggactgatgctacatcaaaatttccaacaaaatttgtccaattt 2092331 Query: 535 cc 536 || Sbjct: 2092332 cc 2092333 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 382 gacttccacccttctgatatctaccgaattgccagttgtggcatggataatactgttaaa 441 ||||||||| | |||||||||||||| || |||||||| ||||| || ||||| | | Sbjct: 2092103 gacttccacacatctgatatctaccgctttttaagttgtggaatggacaacactgtgaga 2092162 Query: 442 atctggtcaatgaaag 457 |||||||||||||||| Sbjct: 2092163 atctggtcaatgaaag 2092178 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 307 tggaatgtccatacagggatctgcattttgatttttgctggaggaggaggtcaccg 362 |||||||| || |||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 2091783 tggaatgtgcagacagggatcttaattttggtttttggtggagtaggaggtcaccg 2091838 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 556 cattctaactatgttgactgtactaggtggcttggtgacttcatcctgtc 605 |||||||||||||| |||||||||| |||||||| ||||| ||||||| Sbjct: 2092451 cattctaactatgtagactgtactaaatggcttggggactttgtcctgtc 2092500
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 295 tctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggagga 354 ||||||||| | |||||||| || ||||||||||||||||||||||||||||||| |||| Sbjct: 68251 tctgttaggctgtggaatgttcacacagggatctgcattttgatttttgctggagcagga 68310 Query: 355 ggtcaccgtaatgaagtattgagtgttg 382 |||||||| ||||||||||||||||||| Sbjct: 68311 ggtcaccggaatgaagtattgagtgttg 68338 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 97 ttctacaccctgagctgggcttgtgaccttgacggcacaccactgctagtggcagcagga 156 |||||||| ||||| ||||||||||| ||||| |||||||| ||| ||||||| |||||| Sbjct: 67297 ttctacacactgagttgggcttgtgatcttgatggcacaccgctgttagtggctgcagga 67356 Query: 157 agcaatgcggtcattcgggtcatcaactgtgccaccgagaagtt 200 ||||||| | ||||||||||||||||||||||||| |||||||| Sbjct: 67357 agcaatgggatcattcgggtcatcaactgtgccactgagaagtt 67400 Score = 121 bits (61), Expect = 3e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 456 agaattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttcc 515 |||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 68710 agaattctggccatatgttgagcaatcctttacatggactgaccttccatcaaaatttcc 68769 Query: 516 aacaaaatatgtccaatttcc 536 |||||||||||| |||||||| Sbjct: 68770 aacaaaatatgtgcaatttcc 68790 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 206 agacttttcttggccatggtgattcaataaatgagataagaactcaaccattgaagcctt 265 |||||||| |||||||||| ||||||||||| ||||||||||||||| |||| ||||||| Sbjct: 68083 agacttttgttggccatggcgattcaataaacgagataagaactcaagcattaaagcctt 68142 Query: 266 cactcttcatttctgcaagcaagg 289 | ||| |||||||||||||||||| Sbjct: 68143 cgctcatcatttctgcaagcaagg 68166 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 382 gacttccacccttctgatatctaccgaattgccagttgtggcatggataatactgttaaa 441 ||||||||||| |||||||||||||| || || ||||||||||||||||| ||||||||| Sbjct: 68553 gacttccacccatctgatatctaccgcatagcaagttgtggcatggataacactgttaaa 68612 Query: 442 atctggtcaatgaa 455 || ||||||||||| Sbjct: 68613 atatggtcaatgaa 68626 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 556 cattctaactatgttgactgtactaggtggcttggtgacttcatcctgtc 605 ||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 68907 cattctaactatgttgattgtactagatggcttggtgacttcattctgtc 68956 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 215 ttggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactcttca 274 |||||||||||| |||| |||| || |||| ||||||||| ||| ||||||||| ||| Sbjct: 85142 ttggccatggtggttcagtaaacgaaataaagtctcaaccatcgaatccttcactcatca 85201 Query: 275 tttctgcaagcaagg 289 ||||||||||||||| Sbjct: 85202 tttctgcaagcaagg 85216 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 92 agtcattctacaccctgagctgggcttgtgaccttgacggcacaccactgctagtggcag 151 ||||||||| ||| ||||||||||||| ||| |||| |||| ||| || |||| || | Sbjct: 84604 agtcattcttcactgtgagctgggcttgcgacattgatggcaatccattgttagtagctg 84663 Query: 152 caggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaag 198 ||||||||| || ||||||| ||||||||||||||||| |||||| Sbjct: 84664 caggaagcactggaatcattcgagtcatcaactgtgccactgagaag 84710 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 475 gagaaatcctttacatggactgaccttccatcaaaatttccaacaaaatatgtccaattt 534 |||||||||| | |||||||||| | ||||||||||||||||||||| |||||||||| Sbjct: 85802 gagaaatcctattcatggactgatgctacatcaaaatttccaacaaaatttgtccaattt 85861 Query: 535 cc 536 || Sbjct: 85862 cc 85863 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 382 gacttccacccttctgatatctaccgaattgccagttgtggcatggataatactgttaaa 441 ||||||||| | |||||||||||||| || |||||||| ||||| || ||||| | | Sbjct: 85633 gacttccacacatctgatatctaccgctttttaagttgtggaatggacaacactgtgaga 85692 Query: 442 atctggtcaatgaaag 457 |||||||||||||||| Sbjct: 85693 atctggtcaatgaaag 85708 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 307 tggaatgtccatacagggatctgcattttgatttttgctggaggaggaggtcaccg 362 |||||||| || |||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 85313 tggaatgtgcagacagggatcttaattttggtttttggtggagtaggaggtcaccg 85368 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 556 cattctaactatgttgactgtactaggtggcttggtgacttcatcctgtc 605 |||||||||||||| |||||||||| |||||||| ||||| ||||||| Sbjct: 85981 cattctaactatgtagactgtactaaatggcttggggactttgtcctgtc 86030
>ref|NM_112965.1| Arabidopsis thaliana FIE (FERTILIZATION-INDEPENDENT ENDOSPERM 1); nucleotide binding / transcription factor AT3G20740 (FIE) mRNA, complete cds Length = 1563 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 278 ctgcaagcaaggacgagtctgttaggttatggaatgtccatacagggatctgcattttga 337 |||| |||||||| || |||||| | || |||||||| | || ||||| || ||||||| Sbjct: 635 ctgctagcaaggatgaatctgttcgtttgtggaatgttgaaactgggatatgtattttga 694 Query: 338 tttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgacttccacccttctg 397 | |||||||||| |||||||| || ||||||| | ||||| || || || || |||| Sbjct: 695 tatttgctggagctggaggtcatcgctatgaagttctaagtgtggattttcatccgtctg 754 Query: 398 atatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| ||||| |||| |||||||| ||||| | ||| ||||||| ||||||||||||| Sbjct: 755 atatttaccgctttgctagttgtggtatggacaccactattaaaatatggtcaatgaaag 814 Query: 458 aattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttccaa 517 | |||||| | ||||| ||||| || || ||||||||||| |||||||||||| || | Sbjct: 815 agttttggacgtacgtcgagaagtcattcacatggactgatgatccatcaaaattcccca 874 Query: 518 caaaatatgtccaatt 533 |||||| ||||||||| Sbjct: 875 caaaatttgtccaatt 890
>emb|BX842554.1|CNS0AEFZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 278 ctgcaagcaaggacgagtctgttaggttatggaatgtccatacagggatctgcattttga 337 |||| |||||||| || |||||| | || |||||||| | || ||||| || ||||||| Sbjct: 466 ctgctagcaaggatgaatctgttcgtttgtggaatgttgaaactgggatatgtattttga 525 Query: 338 tttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgacttccacccttctg 397 | |||||||||| |||||||| || ||||||| | ||||| || || || || |||| Sbjct: 526 tatttgctggagctggaggtcatcgctatgaagttctaagtgtggattttcatccgtctg 585 Query: 398 atatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| ||||| |||| |||||||| ||||| | ||| ||||||| ||||||||||||| Sbjct: 586 atatttaccgctttgctagttgtggtatggacaccactattaaaatatggtcaatgaaag 645 Query: 458 aattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttccaa 517 | |||||| | ||||| ||||| || || ||||||||||| |||||||||||| || | Sbjct: 646 agttttggacgtacgtcgagaagtcattcacatggactgatgatccatcaaaattcccca 705 Query: 518 caaaatatgtccaatt 533 |||||| ||||||||| Sbjct: 706 caaaatttgtccaatt 721
>gb|BT005326.1| Arabidopsis thaliana At3g20730 mRNA, complete cds Length = 1110 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 278 ctgcaagcaaggacgagtctgttaggttatggaatgtccatacagggatctgcattttga 337 |||| |||||||| || |||||| | || |||||||| | || ||||| || ||||||| Sbjct: 437 ctgctagcaaggatgaatctgttcgtttgtggaatgttgaaactgggatatgtattttga 496 Query: 338 tttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgacttccacccttctg 397 | |||||||||| |||||||| || ||||||| | ||||| || || || || |||| Sbjct: 497 tatttgctggagctggaggtcatcgctatgaagttctaagtgtggattttcatccgtctg 556 Query: 398 atatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| ||||| |||| |||||||| ||||| | ||| ||||||| ||||||||||||| Sbjct: 557 atatttaccgctttgctagttgtggtatggacaccactattaaaatatggtcaatgaaag 616 Query: 458 aattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttccaa 517 | |||||| | ||||| ||||| || || ||||||||||| |||||||||||| || | Sbjct: 617 agttttggacgtacgtcgagaagtcattcacatggactgatgatccatcaaaattcccca 676 Query: 518 caaaatatgtccaatt 533 |||||| ||||||||| Sbjct: 677 caaaatttgtccaatt 692
>dbj|AK117114.1| Arabidopsis thaliana At3g20740 mRNA for putative fertilization-independent endosperm protein, complete cds, clone: RAFL16-65-E12 Length = 1406 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 278 ctgcaagcaaggacgagtctgttaggttatggaatgtccatacagggatctgcattttga 337 |||| |||||||| || |||||| | || |||||||| | || ||||| || ||||||| Sbjct: 492 ctgctagcaaggatgaatctgttcgtttgtggaatgttgaaactgggatatgtattttga 551 Query: 338 tttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgacttccacccttctg 397 | |||||||||| |||||||| || ||||||| | ||||| || || || || |||| Sbjct: 552 tatttgctggagctggaggtcatcgctatgaagttctaagtgtggattttcatccgtctg 611 Query: 398 atatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| ||||| |||| |||||||| ||||| | ||| ||||||| ||||||||||||| Sbjct: 612 atatttaccgctttgctagttgtggtatggacaccactattaaaatatggtcaatgaaag 671 Query: 458 aattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttccaa 517 | |||||| | ||||| ||||| || || ||||||||||| |||||||||||| || | Sbjct: 672 agttttggacgtacgtcgagaagtcattcacatggactgatgatccatcaaaattcccca 731 Query: 518 caaaatatgtccaatt 533 |||||| ||||||||| Sbjct: 732 caaaatttgtccaatt 747
>gb|AF129516.1|AF129516 Arabidopsis thaliana fertilization-independent endosperm protein (FIE) mRNA, complete cds Length = 1563 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 278 ctgcaagcaaggacgagtctgttaggttatggaatgtccatacagggatctgcattttga 337 |||| |||||||| || |||||| | || |||||||| | || ||||| || ||||||| Sbjct: 635 ctgctagcaaggatgaatctgttcgtttgtggaatgttgaaactgggatatgtattttga 694 Query: 338 tttttgctggaggaggaggtcaccgtaatgaagtattgagtgttgacttccacccttctg 397 | |||||||||| |||||||| || ||||||| | ||||| || || || || |||| Sbjct: 695 tatttgctggagctggaggtcatcgctatgaagttctaagtgtggattttcatccgtctg 754 Query: 398 atatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| ||||| |||| |||||||| ||||| | ||| ||||||| ||||||||||||| Sbjct: 755 atatttaccgctttgctagttgtggtatggacaccactattaaaatatggtcaatgaaag 814 Query: 458 aattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttccaa 517 | |||||| | ||||| ||||| || || ||||||||||| |||||||||||| || | Sbjct: 815 agttttggacgtacgtcgagaagtcattcacatggactgatgatccatcaaaattcccca 874 Query: 518 caaaatatgtccaatt 533 |||||| ||||||||| Sbjct: 875 caaaatttgtccaatt 890
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 117 bits (59), Expect = 4e-23 Identities = 71/75 (94%) Strand = Plus / Minus Query: 215 ttggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactcttca 274 ||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| ||| Sbjct: 31236 ttggccatggtgactcaataaatgagataagaactcaaccgttgaagccttcgctcatca 31177 Query: 275 tttctgcaagcaagg 289 ||||||||||||||| Sbjct: 31176 tttctgcaagcaagg 31162 Score = 107 bits (54), Expect = 4e-20 Identities = 98/112 (87%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 92 agtcattctacaccctgagctgggcttgtgacc---ttgacggcacaccactgctagtgg 148 ||||||||||||| || ||||||||| |||||| |||| ||| |||||||||| |||| Sbjct: 31761 agtcattctacactctaagctgggctcgtgaccatgttgatggctcaccactgctggtgg 31702 Query: 149 cagcaggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaagtt 200 ||||||||||||||| | |||||||||||||||| ||||| || |||||||| Sbjct: 31701 cagcaggaagcaatgggatcattcgggtcatcaattgtgctacggagaagtt 31650 Score = 103 bits (52), Expect = 7e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 295 tctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggagga 354 ||||||||| ||||||||||||||||||||||||| || ||||| |||||||||| ||| Sbjct: 31067 tctgttaggctatggaatgtccatacagggatctgtatcttgatatttgctggagctgga 31008 Query: 355 ggtcaccgtaatgaagtattgagtgttg 382 ||||| || |||||||| |||||||||| Sbjct: 31007 ggtcatcgcaatgaagtgttgagtgttg 30980 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 456 agaattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttcc 515 ||||||||||| ||| || || ||||| | | ||||||||||||||||||| || ||||| Sbjct: 30635 agaattttggctatatgttgacaaatcatattcatggactgaccttccatcgaagtttcc 30576 Query: 516 aacaaaatatgtccaatttcc 536 ||||||||||||||| ||||| Sbjct: 30575 aacaaaatatgtccagtttcc 30555 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 559 tctaactatgttgactgtactaggtggcttggtgacttcatcct 602 |||||||||||||||||||| || |||||||||||||||||||| Sbjct: 30431 tctaactatgttgactgtacaagatggcttggtgacttcatcct 30388 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 295 tctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggagga 354 ||||||||| ||||||| |||||||||||| ||||||| ||||| ||||| |||| ||| Sbjct: 22370 tctgttaggctatggaacgtccatacaggggtctgcatcttgatctttgcaggagttgga 22311 Query: 355 ggtcaccgtaatgaagtattgagtgttg 382 || || || |||| || |||||||||| Sbjct: 22310 ggccatcgccatgacgtgttgagtgttg 22283 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 410 ttgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 21681 ttgcaagttgtggcatggacaatactgtgaaaatttggtcaatgaaag 21634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 215 ttggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactcttca 274 |||||||||||| ||||||| | |||||||| ||||| | | ||||| ||||||| ||| Sbjct: 22524 ttggccatggtggttcaatacacgagataaggactcatgcgtcgaagcattcactcatca 22465 Query: 275 tttctgcaagcaagg 289 ||||||| ||||||| Sbjct: 22464 tttctgccagcaagg 22450 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 418 tgtggcatggataatactgttaaaatctggtcaatgaaag 457 ||||||||||| || ||||| ||||||||||||||||||| Sbjct: 30744 tgtggcatggacaacactgtgaaaatctggtcaatgaaag 30705 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 567 tgttgactgtactaggtggcttggtgacttcatcctgtc 605 |||||| ||||| || |||||||||||||| |||||||| Sbjct: 21340 tgttgattgtacaagatggcttggtgacttaatcctgtc 21302 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 488 catggactgaccttccatcaaaatttccaacaa 520 ||||||||||| ||||||||| |||||||||| Sbjct: 21514 catggactgacaatccatcaaagtttccaacaa 21482
>gb|AY195848.1| Zea mays fertilization-independent type 1 gene, complete cds Length = 6220 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 295 tctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggagga 354 ||||||||| ||||||||||||||||||||||||| || ||||| |||||||||| ||| Sbjct: 3166 tctgttaggctatggaatgtccatacagggatctgtatcttgatatttgctggagctgga 3225 Query: 355 ggtcaccgtaatgaagtattgagtgttg 382 ||||| || ||||||||||||||||||| Sbjct: 3226 ggtcatcgcaatgaagtattgagtgttg 3253 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 215 ttggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactcttca 274 |||||||||| || |||||||||||||||||||||||||| ||||||||||| ||| ||| Sbjct: 2992 ttggccatggcgactcaataaatgagataagaactcaaccgttgaagccttcgctcatca 3051 Query: 275 tttctgcaagcaagg 289 ||||||||||||||| Sbjct: 3052 tttctgcaagcaagg 3066 Score = 91.7 bits (46), Expect = 3e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 456 agaattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttcc 515 ||||||||||| ||| || || ||||| | | |||||||||||||||||||||| ||||| Sbjct: 3643 agaattttggctatatgttgacaaatcatattcatggactgaccttccatcaaagtttcc 3702 Query: 516 aacaaaatatgtccaatttcca 537 ||||||||||||||| |||||| Sbjct: 3703 aacaaaatatgtccagtttcca 3724 Score = 83.8 bits (42), Expect = 6e-13 Identities = 86/100 (86%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 92 agtcattctacaccctgagctgggcttgtgacc---ttgacggcacaccactgctagtgg 148 |||| ||||| || || ||||||||| |||||| |||| ||| |||||||||| |||| Sbjct: 2469 agtcgttctatactctaagctgggctcgtgaccatgttgatggctcaccactgctggtgg 2528 Query: 149 cagcaggaagcaatgcggtcattcgggtcatcaactgtgc 188 ||||||||||||||| | |||||||||||||||| ||||| Sbjct: 2529 cagcaggaagcaatgggatcattcgggtcatcaattgtgc 2568 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 559 tctaactatgttgactgtactaggtggcttggtgacttcatcct 602 |||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 3842 tctaactatgttgattgtacaagatggcttggtgacttcatcct 3885 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 410 ttgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| |||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 3525 ttgcaagttgtggcatggacaacactgtgaaaatctggtcaatgaaag 3572
>gb|AY150646.1| Zea mays fertilization-independent endosperm protein 2 gene, complete cds Length = 10821 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 295 tctgttaggttatggaatgtccatacagggatctgcattttgatttttgctggaggagga 354 ||||||||| ||||||||||||||||||||||||| || ||||| |||||||||| ||| Sbjct: 7883 tctgttaggctatggaatgtccatacagggatctgtatcttgatatttgctggagctgga 7942 Query: 355 ggtcaccgtaatgaagtattgagtgttg 382 ||||| || ||||||||||||||||||| Sbjct: 7943 ggtcatcgcaatgaagtattgagtgttg 7970 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 215 ttggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactcttca 274 |||||||||| || |||||||||| ||||||||||||||| ||||||||||| ||| ||| Sbjct: 7710 ttggccatggcgactcaataaatgtgataagaactcaaccgttgaagccttcgctcatca 7769 Query: 275 tttctgcaagcaagg 289 ||||||||||||||| Sbjct: 7770 tttctgcaagcaagg 7784 Score = 83.8 bits (42), Expect = 6e-13 Identities = 86/100 (86%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 92 agtcattctacaccctgagctgggcttgtgacc---ttgacggcacaccactgctagtgg 148 |||| ||||| || || ||||||||| |||||| |||| ||| |||||||||| |||| Sbjct: 7187 agtcgttctatactctaagctgggctcgtgaccatgttgatggctcaccactgctggtgg 7246 Query: 149 cagcaggaagcaatgcggtcattcgggtcatcaactgtgc 188 ||||||||||||||| | |||||||||||||||| ||||| Sbjct: 7247 cagcaggaagcaatgggatcattcgggtcatcaattgtgc 7286 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 456 agaattttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttcc 515 ||||||||||| ||| || || ||||| | | |||||||||||||||||||||| ||||| Sbjct: 8360 agaattttggctatatgttgacaaatcatattcatggactgaccttccatcaaagtttcc 8419 Query: 516 aacaaaatatgtccaatttcca 537 |||||||||| ||| |||||| Sbjct: 8420 cacaaaatatggccagtttcca 8441 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 559 tctaactatgttgactgtactaggtggcttggtgacttcatcct 602 |||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 8559 tctaactatgttgattgtacaagatggcttggtgacttcatcct 8602 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 410 ttgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| |||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 8242 ttgcaagttgtggcatggacaacactgtgaaaatctggtcaatgaaag 8289
>gb|AY150643.1| Zea mays fertilization-independent endosperm protein 2 mRNA, partial cds Length = 744 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 511 tttccaacaaaatatgtccaatttccacttatgacttccgtggtgcattctaactatgtt 570 |||||||||||||||||||| |||||| | ||| | | | || || |||||||||||| Sbjct: 5 tttccaacaaaatatgtccagtttccagtcttgattgctgcagtacactctaactatgtt 64 Query: 571 gactgtactaggtggcttggtgacttcatcct 602 || ||||| || |||||||||||||||||||| Sbjct: 65 gattgtacaagatggcttggtgacttcatcct 96
>gb|AY150645.1| Zea mays fertilization-independent endosperm protein 1 gene, complete cds Length = 12123 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 215 ttggccatggtgattcaataaatgagataagaactcaaccattgaagccttcactcttca 274 |||||||||||| ||||||| |||||||||| ||||| | | |||||| |||||| ||| Sbjct: 6430 ttggccatggtggttcaatacatgagataaggactcatgcctcgaagccatcactcatca 6489 Query: 275 tttctgcaagcaagg 289 ||||||| ||||||| Sbjct: 6490 tttctgccagcaagg 6504 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 563 actatgttgactgtactaggtggcttggtgacttcatcct 602 |||||||||| ||||| || |||||||||||||||||||| Sbjct: 7256 actatgttgattgtacaagatggcttggtgacttcatcct 7295 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 410 ttgccagttgtggcatggataatactgttaaaatctggtcaatgaaag 457 |||| |||||||||||||| |||||||| || || ||||||||||||| Sbjct: 6910 ttgcaagttgtggcatggacaatactgtgaagatttggtcaatgaaag 6957 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 145 gtggcagcaggaagcaatgcggtcattcgggtcatcaactgtgccaccgagaagtt 200 ||||| || ||||||||| | |||||||||||||||| ||||| ||||| ||||| Sbjct: 6089 gtggccgctggaagcaatcggatcattcgggtcatcaattgtgctaccgaaaagtt 6144 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 299 ttaggttatggaatgtccatacagggatctgcat 332 ||||| |||||||||||||||| ||||| ||||| Sbjct: 6577 ttaggctatggaatgtccatactgggatttgcat 6610
>dbj|AB025629.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOE17 Length = 81677 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 460 ttttggccatacgtggagaaatcctttacatggactgaccttccatcaaaatttccaaca 519 |||||| | ||||| ||||| || || ||||||||||| |||||||||||| || ||| Sbjct: 10690 ttttggacgtacgtcgagaagtcattcacatggactgatgatccatcaaaattccccaca 10631 Query: 520 aaatatgtccaatt 533 |||| ||||||||| Sbjct: 10630 aaatttgtccaatt 10617 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Minus Query: 394 tctgatatctaccgaattgccagttgtggcatggataatactgttaaaatctggtcaatg 453 |||||||| ||||| |||| |||||||| ||||| | ||| ||||||| ||||||||| Sbjct: 10862 tctgatatttaccgctttgctagttgtggtatggacaccactattaaaatatggtcaatg 10803 Query: 454 aaag 457 |||| Sbjct: 10802 aaag 10799
>dbj|AB060291.1| Asterina pectinifera mRNA for kinase Akt/PKB, complete cds Length = 1662 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 tgccaccgagaagttgtttaagacttt 212 |||||| |||||||||||||||||||| Sbjct: 279 tgccactgagaagttgtttaagacttt 253
>ref|NM_197280.1| Oryza sativa (japonica cultivar-group) putative methionine aminopeptidase (OSJNBb0091N21.29), mRNA Length = 1413 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 688 catcaacatttccaacaaaatatgtc 663
>ref|XM_476612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 310 catcaacatttccaacaaaatatgtc 285
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 82369 catcaacatttccaacaaaatatgtc 82394
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 18996295 catcaacatttccaacaaaatatgtc 18996270
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 2443470 catcaacatttccaacaaaatatgtc 2443495
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 8450 catcaacatttccaacaaaatatgtc 8475
>dbj|AP003957.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1470_H06 Length = 62794 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 17217 catcaacatttccaacaaaatatgtc 17242
>dbj|AK066207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056N09, full insert sequence Length = 1594 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 871 catcaacatttccaacaaaatatgtc 846
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 503 catcaaaatttccaacaaaatatgtc 528 |||||| ||||||||||||||||||| Sbjct: 19007549 catcaacatttccaacaaaatatgtc 19007524
>gb|DQ240221.1| Avicennia germinans clone Agerm_CT_001 microsatellite sequence Length = 697 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 307 tggaatgtccatacagggatctgcattttgatttttgctgg 347 |||||||| ||||| ||| | ||||||||||| |||||||| Sbjct: 77 tggaatgttcatactggggtttgcattttgatatttgctgg 117
>gb|AC006258.1| Arabidopsis thaliana BAC F18G18 from chromosome V near 60.5 cM, complete sequence Length = 110469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 ccttcactcttcatttctgca 282 ||||||||||||||||||||| Sbjct: 93333 ccttcactcttcatttctgca 93313
>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence Length = 195459 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 caatgaaagaattttggccat 469 ||||||||||||||||||||| Sbjct: 104222 caatgaaagaattttggccat 104242
>gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete sequence Length = 162912 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 caatgaaagaattttggccat 469 ||||||||||||||||||||| Sbjct: 77659 caatgaaagaattttggccat 77679
>emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in linkage group 14, complete sequence Length = 168298 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cttcactcttcatttctgcaa 283 ||||||||||||||||||||| Sbjct: 145986 cttcactcttcatttctgcaa 145966
>gb|AC013244.39| Homo sapiens 12 BAC RP11-60E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119008 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 aagccttcactcttcatttct 279 ||||||||||||||||||||| Sbjct: 107070 aagccttcactcttcatttct 107050
>gb|AC021636.16| Homo sapiens chromosome 8, clone RP11-637F16, complete sequence Length = 148687 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ccctgagctgggcttgtgacc 124 ||||||||||||||||||||| Sbjct: 61396 ccctgagctgggcttgtgacc 61416
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence Length = 110684 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 ccttcactcttcatttctgca 282 ||||||||||||||||||||| Sbjct: 9054 ccttcactcttcatttctgca 9034
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tgctggaggaggaggtcaccg 362 ||||||||||||||||||||| Sbjct: 21209 tgctggaggaggaggtcaccg 21229
>emb|AL954175.6| Zebrafish DNA sequence from clone CH211-201N5, complete sequence Length = 176268 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cttcactcttcatttctgcaa 283 ||||||||||||||||||||| Sbjct: 104081 cttcactcttcatttctgcaa 104061
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gtggcagcaggaagcaatgc 164 |||||||||||||||||||| Sbjct: 72333 gtggcagcaggaagcaatgc 72352
>gb|AC135101.24| Medicago truncatula clone mth2-18a18, complete sequence Length = 121741 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 catggtgattcaataaatga 239 |||||||||||||||||||| Sbjct: 101348 catggtgattcaataaatga 101367
>gb|AC124579.3| Mus musculus BAC clone RP23-86P2 from chromosome 13, complete sequence Length = 167801 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ttgctggaggaggaggtcac 360 |||||||||||||||||||| Sbjct: 49136 ttgctggaggaggaggtcac 49155
>gb|AC140031.22| Medicago truncatula clone mth2-24d16, complete sequence Length = 114611 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 catggtgattcaataaatga 239 |||||||||||||||||||| Sbjct: 7866 catggtgattcaataaatga 7847
>emb|AL356600.13| Human DNA sequence from clone RP5-974J14 on chromosome 1p31.2-32.1 Contains part of the NEGR1 gene for neuronal growth regulator 1 and part of a novel gene, complete sequence Length = 131457 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gtggcagcaggaagcaatgc 164 |||||||||||||||||||| Sbjct: 103987 gtggcagcaggaagcaatgc 103968
>emb|AL354872.9| Human DNA sequence from clone RP11-42O15 on chromosome 1 Contains the CTH gene for cystathionase (cystathionine gamma-lyase) and a cysteine and histidine-rich domain (CHORD)-containing zinc binding protein 1 (CHORDC1) pseudogene, complete sequence Length = 151777 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 tcaaaatttccaacaaaata 524 |||||||||||||||||||| Sbjct: 114681 tcaaaatttccaacaaaata 114662
>emb|CR387977.8| Zebrafish DNA sequence from clone CH211-72D20 in linkage group 24, complete sequence Length = 167396 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gtaatgaagtattgagtgtt 381 |||||||||||||||||||| Sbjct: 7670 gtaatgaagtattgagtgtt 7651
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 caccctgagctgggcttgtg 121 |||||||||||||||||||| Sbjct: 186908 caccctgagctgggcttgtg 186927
>gb|AC099056.2| Homo sapiens chromosome 3 clone RP11-585O21, complete sequence Length = 182405 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 cagggatctgcattttgatt 339 |||||||||||||||||||| Sbjct: 39030 cagggatctgcattttgatt 39049
>gb|AC114550.4| Homo sapiens chromosome 8, clone CTD-3023L14, complete sequence Length = 159903 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aatgctcagtcattctacac 104 |||||||||||||||||||| Sbjct: 55819 aatgctcagtcattctacac 55800
>gb|AC078958.30| Homo sapiens X BAC RP11-609C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187547 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 agtggcagcaggaagcaatg 163 |||||||||||||||||||| Sbjct: 40896 agtggcagcaggaagcaatg 40915
>gb|AC104071.3| Homo sapiens BAC clone RP11-315A17 from 4, complete sequence Length = 184001 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 tcaaaatttccaacaaaata 524 |||||||||||||||||||| Sbjct: 26937 tcaaaatttccaacaaaata 26956
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tgattcaataaatgagataa 244 |||||||||||||||||||| Sbjct: 3363272 tgattcaataaatgagataa 3363291
>dbj|BS000086.1| Pan troglodytes chromosome 22 clone:PTB-102L15, map 22, complete sequences Length = 213585 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 agacttttcttggccatggt 225 |||||||||||||||||||| Sbjct: 67194 agacttttcttggccatggt 67213
>gb|AC153614.5| Mus musculus 6 BAC RP23-344N8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205813 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 aaaatctggtcaatgaaagaattt 462 |||||||||| ||||||||||||| Sbjct: 156584 aaaatctggtaaatgaaagaattt 156561
>emb|CT573090.2| RP43-052E01, complete sequence Length = 161118 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 agtggcagcaggaagcaatg 163 |||||||||||||||||||| Sbjct: 40564 agtggcagcaggaagcaatg 40545
>gb|U04327.1|SFU04327 Simian foamy virus SFVcpz, complete genome Length = 13246 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 ggagaaatcctttacatgga 493 |||||||||||||||||||| Sbjct: 1945 ggagaaatcctttacatgga 1964 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,475,209 Number of Sequences: 3902068 Number of extensions: 6475209 Number of successful extensions: 116884 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116522 Number of HSP's gapped (non-prelim): 349 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
