Clone Information

BLAST Search Result

Clone Name	bags7d06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog	48	3e-09
2	FTSY_NEIMC (O30391) Cell division protein ftsY homolog	45	6e-09
3	FTSY_NEIMB (P57011) Cell division protein ftsY homolog	45	6e-09
4	FTSY_NEIMA (P57010) Cell division protein ftsY homolog	45	6e-09
5	FTSY_BACSU (P51835) Cell division protein ftsY homolog	40	1e-08
6	FTSY_BUCAI (P57137) Cell division protein ftsY homolog	49	2e-08
7	FTSY_NEIGO (P14929) Cell division protein ftsY homolog	40	1e-07
8	FTSY_AQUAE (O67066) Cell division protein ftsY homolog	51	6e-07
9	FTSY_MYCTU (P66842) Cell division protein ftsY homolog	45	1e-06
10	FTSY_MYCBO (P66843) Cell division protein ftsY homolog	45	1e-06
11	Y291_METJA (Q57739) Probable signal recognition particle protein...	40	2e-06
12	FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog	42	6e-06
13	SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-...	41	2e-05
14	FTSY_MYCLE (O33010) Cell division protein ftsY homolog	40	2e-05
15	FTSY_RICPR (O05948) Cell division protein ftsY homolog	37	3e-05
16	FTSY_HAEIN (P44870) Cell division protein ftsY homolog	45	3e-05
17	DOCK_SULAC (P27414) Probable signal recognition particle protein...	44	1e-04
18	FTSY_MYCHO (O32861) Cell division protein ftsY homolog	42	4e-04
19	FTSY_ECOLI (P10121) Cell division protein ftsY	42	4e-04
20	SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-...	41	6e-04
21	SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-...	40	0.001
22	SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-...	40	0.001
23	SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)	36	0.006
24	SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)	37	0.009
25	SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)	37	0.009
26	FTSY_SYNY3 (P73930) Cell division protein ftsY homolog	33	0.010
27	SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-...	37	0.012
28	SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-...	37	0.012
29	SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-...	37	0.012
30	SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-...	37	0.016
31	SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)	36	0.020
32	SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)	36	0.020
33	SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)	35	0.035
34	SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein,...	35	0.035
35	FTSY_HELPY (O25458) Cell division protein ftsY homolog	31	0.038
36	FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog	31	0.038
37	SRPR_YEAST (P32916) Signal recognition particle receptor alpha s...	31	0.046
38	SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (...	35	0.059
39	SR541_ARATH (P37106) Signal recognition particle 54 kDa protein ...	34	0.10
40	SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-...	33	0.13
41	SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)	33	0.13
42	SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)	33	0.13
43	SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)	33	0.13
44	SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-...	33	0.17
45	FTSY_THEAQ (P83749) Cell division protein ftsY	33	0.17
46	SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein ...	30	0.21
47	SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54)	32	0.29
48	SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)	32	0.38
49	SR543_HORVU (P49970) Signal recognition particle 54 kDa protein ...	32	0.38
50	SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-...	32	0.50
51	FTSY_MYCPN (P75362) Cell division protein ftsY homolog	31	0.66
52	SR542_HORVU (P49969) Signal recognition particle 54 kDa protein ...	31	0.86
53	SR541_HORVU (P49968) Signal recognition particle 54 kDa protein ...	31	0.86
54	SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-...	31	0.86
55	SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-...	31	0.86
56	SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-...	31	0.86
57	DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460	31	0.86
58	SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-...	31	0.86
59	SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha s...	31	0.86
60	Y2378_BACHD (Q9KAB2) UPF0144 protein BH2378	30	1.1
61	SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein ...	30	1.1
62	SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)	30	1.1
63	Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417	30	1.5
64	URK_STRP8 (Q8P0F8) Uridine kinase (EC 2.7.1.48) (Uridine monopho...	30	1.9
65	SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)	30	1.9
66	SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein ...	30	1.9
67	SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-...	30	1.9
68	SR542_ARATH (P49966) Signal recognition particle 54 kDa protein ...	29	2.5
69	SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein ...	29	3.3
70	SYCP1_MESAU (Q60563) Synaptonemal complex protein 1 (SCP-1) (Mei...	29	3.3
71	HS104_YEAST (P31539) Heat shock protein 104	28	4.3
72	SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)	28	4.3
73	URK1_YEAST (P27515) Uridine kinase (EC 2.7.1.48) (Uridine monoph...	28	4.3
74	CBIO1_TREDE (Q73R11) Putative cobalt import ATP-binding protein ...	28	4.3
75	Y1625_OCEIH (Q8EQR7) UPF0144 protein OB1625	28	4.3
76	URK_OCEIH (Q8EPT5) Uridine kinase (EC 2.7.1.48) (Uridine monopho...	28	5.6
77	NODQ_AZOBR (P28604) NodQ bifunctional enzyme (Nodulation protein...	28	5.6
78	SR541_LYCES (P49971) Signal recognition particle 54 kDa protein ...	28	5.6
79	YMDA_BACSU (O31774) UPF0144 protein ymdA	28	5.6
80	Y2462_DEIRA (Q9RRM6) UPF0144 protein DR2462	28	7.3
81	CCMA_BORPA (Q7W736) Cytochrome c biogenesis ATP-binding export p...	28	7.3
82	CCMA_BORBR (Q7WIP8) Cytochrome c biogenesis ATP-binding export p...	28	7.3
83	Y005_NPVOP (Q65371) Hypothetical 8.6 kDa protein (ORF7) (ORF 5)	28	7.3
84	SRPR_CANFA (P06625) Signal recognition particle receptor alpha s...	28	7.3
85	SR542_LYCES (P49972) Signal recognition particle 54 kDa protein ...	28	7.3
86	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	28	7.3
87	CBIO3_STAAW (Q8NUH8) Putative cobalt import ATP-binding protein ...	28	7.3
88	CBIO3_STAAS (Q6G5Z1) Putative cobalt import ATP-binding protein ...	28	7.3
89	CBIO3_STAAR (Q6GDC0) Putative cobalt import ATP-binding protein ...	28	7.3
90	CBIO3_STAAN (Q7A342) Putative cobalt import ATP-binding protein ...	28	7.3
91	CBIO3_STAAM (Q99QV7) Putative cobalt import ATP-binding protein ...	28	7.3
92	CBIO3_STAAC (Q5HCL3) Putative cobalt import ATP-binding protein ...	28	7.3
93	URK_STRP6 (Q5XBI8) Uridine kinase (EC 2.7.1.48) (Uridine monopho...	27	9.5
94	URK_STRP3 (P67416) Uridine kinase (EC 2.7.1.48) (Uridine monopho...	27	9.5
95	URK_STRP1 (P67415) Uridine kinase (EC 2.7.1.48) (Uridine monopho...	27	9.5
96	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	27	9.5
97	SR543_ARATH (P49967) Signal recognition particle 54 kDa protein ...	27	9.5
98	POLN_LORDV (P54634) Non-structural polyprotein [Contains: p48; H...	27	9.5
99	MSH6_YEAST (Q03834) MutS protein homolog 6	27	9.5
100	AFAD_HUMAN (P55196) Afadin (AF-6 protein)	27	9.5
101	ZNUC_HAEIN (P44692) High-affinity zinc uptake system ATP-binding...	27	9.5
102	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	27	9.5
103	DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (P...	27	9.5
104	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	27	9.5
105	CBIO3_LACJO (Q74I62) Putative cobalt import ATP-binding protein ...	27	9.5

>FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog|
          Length = 397

 Score = 47.8 bits (112), Expect(2) = 3e-09
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = +1

Query: 31  VLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXT 210
           +LDD+EE LLVSD   + +  +VD+L       +LK+   I   LK  + ++L       
Sbjct: 125 LLDDIEEQLLVSDIGVRTTRELVDSLIKVSTQHELKNLNLIIEILKSKMKKILNKVEG-- 182

Query: 211 ELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            L + ++   VI++VGVNG GKT L  K
Sbjct: 183 PLNINYKNLFVILVVGVNGVGKTTLIGK 210



 Score = 30.8 bits (68), Expect(2) = 3e-09
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 269 VERQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           V +   +GKLA  +  +G  V++AAGDTF
Sbjct: 202 VGKTTLIGKLAKNYKKKGKSVILAAGDTF 230

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>FTSY_NEIMC (O30391) Cell division protein ftsY homolog|
          Length = 421

 Score = 44.7 bits (104), Expect(2) = 6e-09
 Identities = 25/81 (30%), Positives = 43/81 (53%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTEL 216
           ++LE  L+ SD   + +  ++  +RD +    LK G E+  +LK  + +L+        L
Sbjct: 156 EELETVLITSDMDMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVL 215

Query: 217 QLGFRKPAVIMIVGVNGGGKT 279
               ++P VIM+ G+NG GKT
Sbjct: 216 P-ETKEPFVIMLAGINGAGKT 235



 Score = 33.1 bits (74), Expect(2) = 6e-09
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  S+GKLA  F  +G  VL+AAGDTF
Sbjct: 234 KTTSIGKLAKYFQAQGKSVLLAAGDTF 260

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>FTSY_NEIMB (P57011) Cell division protein ftsY homolog|
          Length = 421

 Score = 44.7 bits (104), Expect(2) = 6e-09
 Identities = 25/81 (30%), Positives = 43/81 (53%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTEL 216
           ++LE  L+ SD   + +  ++  +RD +    LK G E+  +LK  + +L+        L
Sbjct: 156 EELETVLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVL 215

Query: 217 QLGFRKPAVIMIVGVNGGGKT 279
               ++P VIM+ G+NG GKT
Sbjct: 216 P-ETKEPFVIMLAGINGAGKT 235



 Score = 33.1 bits (74), Expect(2) = 6e-09
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  S+GKLA  F  +G  VL+AAGDTF
Sbjct: 234 KTTSIGKLAKYFQAQGKSVLLAAGDTF 260

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>FTSY_NEIMA (P57010) Cell division protein ftsY homolog|
          Length = 421

 Score = 44.7 bits (104), Expect(2) = 6e-09
 Identities = 25/81 (30%), Positives = 43/81 (53%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTEL 216
           ++LE  L+ SD   + +  ++  +RD +    LK G E+  +LK  + +L+        L
Sbjct: 156 EELETVLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVL 215

Query: 217 QLGFRKPAVIMIVGVNGGGKT 279
               ++P VIM+ G+NG GKT
Sbjct: 216 P-ETKEPFVIMLAGINGAGKT 235



 Score = 33.1 bits (74), Expect(2) = 6e-09
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  S+GKLA  F  +G  VL+AAGDTF
Sbjct: 234 KTTSIGKLAKYFQAQGKSVLLAAGDTF 260

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>FTSY_BACSU (P51835) Cell division protein ftsY homolog|
          Length = 329

 Score = 40.4 bits (93), Expect(2) = 1e-08
 Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSX-TE 213
           ++LEE L+ +D        ++D L+ E++   ++   E+ + +   ++E+  +     +E
Sbjct: 53  EELEEVLISADVGFTTVMELIDELKKEVKRRNIQDPKEVQSVISEKLVEIYNSGDEQISE 112

Query: 214 LQLGFRKPAVIMIVGVNGGGKTXLARK 294
           L +   +  VI++VGVNG GKT    K
Sbjct: 113 LNIQDGRLNVILLVGVNGVGKTTTIGK 139



 Score = 36.2 bits (82), Expect(2) = 1e-08
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +2

Query: 269 VERQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           V +  ++GKLAH+   EG  V++AAGDTF
Sbjct: 131 VGKTTTIGKLAHKMKQEGKSVVLAAGDTF 159

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>FTSY_BUCAI (P57137) Cell division protein ftsY homolog|
          Length = 378

 Score = 48.9 bits (115), Expect(2) = 2e-08
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +1

Query: 25  DRVL-DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKG 201
           D VL ++LEE +L++D     + RI+  L  ++    LK+  ++   LKR +  +L  K 
Sbjct: 108 DEVLFEELEEKMLLADIGINTTNRIISNLIKDVNREDLKNSEKLYFLLKRKMFNIL--KK 165

Query: 202 SXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
               L++    P VI++VGVNG GKT    K
Sbjct: 166 VEIPLEISSHSPFVILVVGVNGTGKTTTVAK 196



 Score = 27.3 bits (59), Expect(2) = 2e-08
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++ KLA ++  EG  +++AA DTF
Sbjct: 190 KTTTVAKLAEKYKLEGKSIMLAAADTF 216

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>FTSY_NEIGO (P14929) Cell division protein ftsY homolog|
          Length = 416

 Score = 40.4 bits (93), Expect(2) = 1e-07
 Identities = 23/81 (28%), Positives = 41/81 (50%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTEL 216
           ++LE  L+  D   + +  ++  +R  +    LK G E+  +LK  + +L+        L
Sbjct: 152 EELETVLITGDMGMEATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVL 211

Query: 217 QLGFRKPAVIMIVGVNGGGKT 279
               ++P VIM+ G+NG GKT
Sbjct: 212 P-ETKEPFVIMLAGINGAGKT 231



 Score = 33.1 bits (74), Expect(2) = 1e-07
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  S+GKLA  F  +G  VL+AAGDTF
Sbjct: 230 KTTSIGKLAKYFQAQGKSVLLAAGDTF 256

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>FTSY_AQUAE (O67066) Cell division protein ftsY homolog|
          Length = 461

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 32/95 (33%), Positives = 50/95 (52%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGS 204
           +   ++LEE L+ +D   K +  + + LR E     +K G +I   LK+ + ELL  K  
Sbjct: 192 EEFFEELEEMLVKADVGVKTAVELTEKLRKEAIRKNIKEGEKIKELLKKELKELL--KNC 249

Query: 205 XTELQLGFRKPAVIMIVGVNGGGKTXLARKTCPQI 309
             EL++  +  AV++ VGVNG GKT    K   Q+
Sbjct: 250 QGELKIPEKVGAVLLFVGVNGSGKTTTIGKLAHQL 284



 Score = 35.0 bits (79), Expect = 0.045
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++GKLAH+   +G KVL+ AGDTF
Sbjct: 273 KTTTIGKLAHQLKQKGKKVLLVAGDTF 299

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>FTSY_MYCTU (P66842) Cell division protein ftsY homolog|
          Length = 422

 Score = 45.1 bits (105), Expect(2) = 1e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
 Frame = +1

Query: 40  DLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTELQ 219
           D+E+ LLV+D  P  +  +V  LR  +  G +++  +  A L+  ++          ELQ
Sbjct: 157 DVEDTLLVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLI---------NELQ 207

Query: 220 LGFRK----------PAVIMIVGVNGGGKTXLARK 294
            G  +          P+V+++VGVNG GKT    K
Sbjct: 208 PGMDRSIRALPHAGHPSVLLVVGVNGTGKTTTVGK 242



 Score = 25.0 bits (53), Expect(2) = 1e-06
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++GKLA     +G +V++ A DTF
Sbjct: 236 KTTTVGKLARVLVADGRRVVLGAADTF 262

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>FTSY_MYCBO (P66843) Cell division protein ftsY homolog|
          Length = 422

 Score = 45.1 bits (105), Expect(2) = 1e-06
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
 Frame = +1

Query: 40  DLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTELQ 219
           D+E+ LLV+D  P  +  +V  LR  +  G +++  +  A L+  ++          ELQ
Sbjct: 157 DVEDTLLVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLI---------NELQ 207

Query: 220 LGFRK----------PAVIMIVGVNGGGKTXLARK 294
            G  +          P+V+++VGVNG GKT    K
Sbjct: 208 PGMDRSIRALPHAGHPSVLLVVGVNGTGKTTTVGK 242



 Score = 25.0 bits (53), Expect(2) = 1e-06
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++GKLA     +G +V++ A DTF
Sbjct: 236 KTTTVGKLARVLVADGRRVVLGAADTF 262

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>Y291_METJA (Q57739) Probable signal recognition particle protein MJ0291|
          Length = 409

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
 Frame = +1

Query: 19  DTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXA----SLKRCILEL 186
           D + VL++LE ALL +D   ++  ++++ +++E+   K+     +      ++K  I  +
Sbjct: 122 DIEDVLEELEIALLEADVALEVVEKLIENIKNELVGRKISPDDNVEEITINAVKNAIKNI 181

Query: 187 LTTKGSXTELQLGFRK----PAVIMIVGVNGGGKTXLARK 294
           L+ +    E  +   K    P VI+ VG+NG GKT    K
Sbjct: 182 LSQEKIDIEEIIKKNKAEGKPTVIVFVGINGTGKTTTIAK 221



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++ KLA++   +G  V++AAGDTF
Sbjct: 215 KTTTIAKLAYKLKQKGYSVVLAAGDTF 241

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>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog|
          Length = 351

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 25/90 (27%), Positives = 46/90 (51%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGS 204
           D   ++LE+ +L+SD     + +I+  L ++    +LK+  ++   LK  +  +L     
Sbjct: 81  DAFFEELEDTMLLSDIGVHTTDQIISKLINDATHKELKNPEKVYFLLKEHMYSILNRVEK 140

Query: 205 XTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
              L++    P VI++VG+NG GKT    K
Sbjct: 141 --PLKISNHTPFVILVVGINGTGKTTTVSK 168



 Score = 25.0 bits (53), Expect(2) = 6e-06
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++ KLA ++   G  V++AA DTF
Sbjct: 162 KTTTVSKLAKKYKLAGKSVMLAAADTF 188

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>SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-four homolog)|
          Length = 449

 Score = 40.8 bits (94), Expect(2) = 2e-05
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFX-PKISFRIVDTLRDEIRDGKLKS---GTEIXASLKRCILELLT 192
           D  + D+  ALL SD   P I   I +  +  +    +KS   G  I   +   ++ LL 
Sbjct: 28  DTAMRDVRVALLESDVALPVIKGFIEEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLA 87

Query: 193 TKGSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
           +  S T+L L  + P  ++IVG+ GGGKT  + K
Sbjct: 88  STESTTKLNLNAKPPVNLLIVGLQGGGKTTASGK 121



 Score = 25.0 bits (53), Expect(2) = 2e-05
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 290 GKLAHRFXNEGAKVLMAAGDTF 355
           GKLA R  N+  KVL+ + DT+
Sbjct: 120 GKLALRLKNQNKKVLLVSLDTY 141

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>FTSY_MYCLE (O33010) Cell division protein ftsY homolog|
          Length = 430

 Score = 40.4 bits (93), Expect(2) = 2e-05
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
 Frame = +1

Query: 40  DLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTELQ 219
           +LE+ LLV+D  P  +  ++  LR  + +  + + ++    L+  ++  L      +   
Sbjct: 165 ELEDTLLVADLGPVATESVMSALRSRLLNSNVHTESDARTMLRDVLISELQPDMDRSIRA 224

Query: 220 LGFRK-PAVIMIVGVNGGGKTXLARK 294
           L     PAV++IVGVNG GKT    K
Sbjct: 225 LPHADHPAVLLIVGVNGTGKTTTVGK 250



 Score = 25.0 bits (53), Expect(2) = 2e-05
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++GKLA     +G +V++ A DTF
Sbjct: 244 KTTTVGKLARVLVADGRRVVLGAADTF 270

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>FTSY_RICPR (O05948) Cell division protein ftsY homolog|
          Length = 303

 Score = 37.4 bits (85), Expect(2) = 3e-05
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTE 213
           L++LEE L+ SD    +   I++  ++   D  + S T     +K  I +L+  + S +E
Sbjct: 37  LNELEELLISSDISISVVTHIIEEFKNVKFDKTIDSDT-----VKEAIAKLIEQQLSKSE 91

Query: 214 LQ--LGFRKPAVIMIVGVNGGGKTXLARK 294
           +   L   K  +I++ GVNG GKT    K
Sbjct: 92  IPFTLSENKLNIILVCGVNGVGKTTTIGK 120



 Score = 27.7 bits (60), Expect(2) = 3e-05
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 269 VERQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           V +  ++GKL+  +  EG KV +AA DTF
Sbjct: 112 VGKTTTIGKLSALYSAEGKKVAVAACDTF 140

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>FTSY_HAEIN (P44870) Cell division protein ftsY homolog|
          Length = 414

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGS 204
           D + ++LEE LL++D     + +I+  L +     +L+    +   LK  + ++L     
Sbjct: 140 DELFEELEEQLLIADIGVPTTSKIIKNLTEHASRKELQDAELLYQQLKVEMADILEPVAQ 199

Query: 205 XTELQLGFRKPAVIMIVGVNGGGKTX----LARK 294
             E+    +KP VI++VGVNG GKT     LARK
Sbjct: 200 PLEID-STKKPYVILMVGVNGVGKTTTIGKLARK 232



 Score = 35.0 bits (79), Expect = 0.045
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +2

Query: 269 VERQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           V +  ++GKLA +F  EG  V++AAGDTF
Sbjct: 220 VGKTTTIGKLARKFQAEGKSVMLAAGDTF 248

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>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking|
           protein) (P41)
          Length = 369

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
 Frame = +1

Query: 19  DTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXA----SLKRCILEL 186
           D + V+++L   LL SD   +++ +I++ L++ +   K+    E+      +LK+ I E+
Sbjct: 94  DLNDVIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEI 153

Query: 187 LTTKGSXTEL----QLGFRKPAVIMIVGVNGGGKTXLARK 294
           LT K   T+L    +   +KP VI+  GVNG GKT    K
Sbjct: 154 LT-KNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAK 192

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>FTSY_MYCHO (O32861) Cell division protein ftsY homolog|
          Length = 351

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGS 204
           +   +DLEE L++SD   K+   I++  + E+R+  +     I   +   +  + T+   
Sbjct: 74  EEFFEDLEEMLIMSDISIKLVQIIINECKKEVRNENITDPKLINEIIADKLFTIYTSNSV 133

Query: 205 X-TELQLGFRKPAVIMIVGVNGGGKTXLARKTCPQI 309
             T L +   +  VI++VGVNG GKT    K   ++
Sbjct: 134 VDTTLNIKDNRLNVILVVGVNGSGKTTSISKIAKKL 169



 Score = 33.1 bits (74), Expect = 0.17
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  S+ K+A +  +EG KVL+AAGDTF
Sbjct: 158 KTTSISKIAKKLIDEGKKVLIAAGDTF 184

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>FTSY_ECOLI (P10121) Cell division protein ftsY|
          Length = 497

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 28/94 (29%), Positives = 47/94 (50%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGS 204
           D + ++LEE LL++D   + + +I+  L +     +L+    +   LK  + E+L     
Sbjct: 225 DDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDE 284

Query: 205 XTELQLGFRKPAVIMIVGVNGGGKTXLARKTCPQ 306
              L +  + P VI++VGVNG GKT    K   Q
Sbjct: 285 --PLNVEGKAPFVILMVGVNGVGKTTTIGKLARQ 316



 Score = 34.3 bits (77), Expect = 0.078
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +2

Query: 269 VERQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           V +  ++GKLA +F  +G  V++AAGDTF
Sbjct: 304 VGKTTTIGKLARQFEQQGKSVMLAAGDTF 332

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>SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-four homolog)|
          Length = 446

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 26/92 (28%), Positives = 44/92 (47%)
 Frame = +1

Query: 19  DTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTK 198
           D + VL ++  ALL +D    +    +  +RD+     ++ G ++  SL + I   L   
Sbjct: 27  DVELVLKEIRIALLDADVNLLVVKNFIKAIRDKTVGQTIEPGQDLQKSLLKTIKTELINI 86

Query: 199 GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            S    +L  ++P  IM+VG+ G GKT    K
Sbjct: 87  LSQPNQELNEKRPLKIMMVGLQGSGKTTTCGK 118

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>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)|
          Length = 525

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +1

Query: 16  ADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTT 195
           AD D    ++  ALL +D    +    +  +++  R  ++ S       + + + E L +
Sbjct: 25  ADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALNPAQQVVKIVNEELIS 84

Query: 196 --KGSXTELQLGFRKPAVIMIVGVNGGGKTXLARKTCPQI 309
              G   EL      P V+M+ G+ G GKT LA K   ++
Sbjct: 85  ILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAARL 124

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>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)|
          Length = 525

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +1

Query: 16  ADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTT 195
           AD D    ++  ALL +D    +    +  +++  R  ++ S       + + + E L +
Sbjct: 25  ADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALNPAQQVVKIVNEELIS 84

Query: 196 --KGSXTELQLGFRKPAVIMIVGVNGGGKTXLARKTCPQI 309
              G   EL      P V+M+ G+ G GKT LA K   ++
Sbjct: 85  ILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAARL 124

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>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score = 35.8 bits (81), Expect(2) = 0.006
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
 Frame = +1

Query: 31  VLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLT----TK 198
           V+ D++ AL+ +D   ++  ++   ++    + K  +G      + + + E LT    T+
Sbjct: 31  VVRDIQRALIQADVNVRLVLKLTKEIQRRALEEKPPAGISKKEHIIKIVYEELTKFLGTE 90

Query: 199 GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
               E++    KP ++++VGV G GKT    K
Sbjct: 91  AKPIEIK---EKPTILLMVGVQGSGKTTTVAK 119



 Score = 21.2 bits (43), Expect(2) = 0.006
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++ KLA  F   G KV +   DT+
Sbjct: 113 KTTTVAKLARHFQKRGYKVGVVCSDTW 139

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>SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)|
          Length = 447

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCIL-ELLTTKG 201
           D  + DL+++L+ SD   K+ F +   +++ +   K  S  E        +  EL    G
Sbjct: 24  DEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSVLERKEWFISIVYDELSKLFG 83

Query: 202 SXTELQLGFRK-PAVIMIVGVNGGGKTXLARK 294
              E  +   K P +IM+VGV G GKT  A K
Sbjct: 84  GDKEPNVNPTKLPFIIMLVGVQGSGKTTTAGK 115

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>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)|
          Length = 451

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
 Frame = +1

Query: 31  VLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCIL-----ELLTT 195
           V+ D++ AL+ +D    ++ ++V  +  EI    L+  T    S K  I+     EL+  
Sbjct: 30  VIKDIQRALIQAD----VNVKLVLKMSKEIERRALEEKTPKGLSKKEHIIKIVYEELVKL 85

Query: 196 KGSXTE-LQLGFRKPAVIMIVGVNGGGKTXLARK 294
            G   + L+L  +K  VI++VG+ G GKT  A K
Sbjct: 86  LGEEAKKLELNPKKQNVILLVGIQGSGKTTTAAK 119

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>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog|
          Length = 504

 Score = 33.5 bits (75), Expect(2) = 0.010
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKL--KSGTEIXASLKRCILELLTTK 198
           +  ++++E  LL +D   + +  I+ TL+D++R+  L  +   E    + R IL+     
Sbjct: 229 EAAVEEIEAILLQADVGVEATDYIITTLQDKLREEALPPEQAIEFLKEILRSILDRPLLS 288

Query: 199 GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
               E         V ++ GVNG GKT    K
Sbjct: 289 LPSAEFAPEAEGLNVWLLTGVNGAGKTTTIGK 320



 Score = 22.7 bits (47), Expect(2) = 0.010
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++GKLA      G   ++AA DTF
Sbjct: 314 KTTTIGKLAFMAKQSGYDCVIAAADTF 340

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>SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-four homolog)|
          Length = 450

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 22/92 (23%), Positives = 43/92 (46%)
 Frame = +1

Query: 19  DTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTK 198
           D   VL ++  ALL +D    +    +  +R++     ++ G ++   L + I + L   
Sbjct: 27  DVQAVLKEIRIALLDADVNLLVVKNFIKAIREQTVGQTVEPGQDLQKWLLKVIKQELINI 86

Query: 199 GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            S    ++  ++P  +M+VG+ G GKT    K
Sbjct: 87  LSQPNQEITSKRPLKVMVVGLQGSGKTTTCGK 118

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>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)|
          Length = 521

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
 Frame = +1

Query: 16  ADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASL-------KRC 174
           AD +    ++  AL  +D    +    V  +++  R      GTE+ A+L       K  
Sbjct: 25  ADIEATTREIRLALFEADVSLPVVRAFVHRIKERAR------GTEVSAALNPAQQIVKIV 78

Query: 175 ILELLTTKGSXTELQLGFRK--PAVIMIVGVNGGGKTXLARK 294
             EL+   G  T  QL F K  P V+M+ G+ G GKT LA K
Sbjct: 79  NEELIGILGGETR-QLAFAKTPPTVVMLAGLQGSGKTTLAGK 119

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>SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-four homolog)|
          Length = 447

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +1

Query: 10  NLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELL 189
           N  +    L ++  +LL +D   + +  I++ ++ +   G +  G      + + + E L
Sbjct: 25  NEENIKETLKEIRLSLLEADVNIEAAKEIINNVKQKALGGYISEGASAHQQMIKIVHEEL 84

Query: 190 TTKGSXTELQLGF-RKPAVIMIVGVNGGGKTXLARK 294
                     L   +KP+V+M+VG+ G GKT  A K
Sbjct: 85  VNILGKENAPLDINKKPSVVMMVGLQGSGKTTTANK 120

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>SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-four homolog)|
          Length = 446

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 25/79 (31%), Positives = 43/79 (54%)
 Frame = +1

Query: 58  LVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTELQLGFRKP 237
           +V DF  K+S R V   +D ++   L  G ++   ++  + EL+   G  +++ +  R P
Sbjct: 48  VVKDFVKKVSERAVG--QDVMKS--LTPGQQVIKVVQEELTELMG--GEESKIAVAKRPP 101

Query: 238 AVIMIVGVNGGGKTXLARK 294
            VIM+VG+ G GKT  + K
Sbjct: 102 TVIMMVGLQGAGKTTTSGK 120

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>SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)|
          Length = 448

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
 Frame = +1

Query: 16  ADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLT- 192
           A    ++ D++ ALL +D   K+  ++   ++    + +  +G      + + + E LT 
Sbjct: 26  ATIKEIVRDIQRALLQADVNVKLVLQLTKQIQKRALEEEPPAGVSKKEHIIKIVYEELTK 85

Query: 193 ---TKGSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
              T+    E++    KP VI+ VG+ G GKT    K
Sbjct: 86  FLGTEAKPLEIK---HKPTVILTVGIQGSGKTTSVAK 119

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>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +1

Query: 31  VLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLT----TK 198
           V+ D++ ALL +D   ++  ++   ++    + K  +G      + + + E LT    T+
Sbjct: 31  VVRDIQRALLQADVNVRLVLKLTKEIQRRALEEKPPAGISKKEHIIKIVYEELTKFLGTE 90

Query: 199 GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
               E++    KP V++ VGV G GKT    K
Sbjct: 91  AKPIEIK---EKPTVLLTVGVQGSGKTTTVAK 119

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>SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)|
          Length = 456

 Score = 35.4 bits (80), Expect = 0.035
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   TYWNLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCIL 180
           +Y +      +  DL+  LL +D   K   ++   +     + K  +G      + R I 
Sbjct: 21  SYIDKETVKEISKDLQRILLKADVNVKTVLQVTKEMERRALEEKPPAGMAHQDYMVRIIY 80

Query: 181 E-LLTTKGSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
           E LL   G  + ++L   KP  IM+VG+ G GKT  A K
Sbjct: 81  EELLKILGEPSNVKL---KPQTIMLVGLYGNGKTTTAGK 116

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>SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein, chloroplast|
           precursor (SRP54) (54 chloroplast protein) (54CP) (FFC)
          Length = 564

 Score = 35.4 bits (80), Expect = 0.035
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = +1

Query: 10  NLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELL 189
           N+A+  R   D+  ALL +D    +  R V ++ D+     +  G +    L + + + L
Sbjct: 102 NIAEPMR---DIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDEL 158

Query: 190 TTK--GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
                G  +ELQ     P VI++ G+ G GKT +  K
Sbjct: 159 VKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAK 195

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>FTSY_HELPY (O25458) Cell division protein ftsY homolog|
          Length = 293

 Score = 31.2 bits (69), Expect(2) = 0.038
 Identities = 26/86 (30%), Positives = 43/86 (50%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTEL 216
           ++LEE L+  D    I + ++++L   +  G L +  ++  +L R +     +    T L
Sbjct: 28  EELEEILIGFD----IQYDLIESLLKHL--GDLITPKQLEVALLRFVRG--DSYYDKTRL 79

Query: 217 QLGFRKPAVIMIVGVNGGGKTXLARK 294
           +    KP V +IVGVNG GKT    K
Sbjct: 80  KTITTKPLVHLIVGVNGAGKTTTIAK 105



 Score = 23.1 bits (48), Expect(2) = 0.038
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++ KLA     +  K L+ AGDTF
Sbjct: 99  KTTTIAKLAKLSLKQHKKALLGAGDTF 125

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>FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog|
          Length = 293

 Score = 31.2 bits (69), Expect(2) = 0.038
 Identities = 26/86 (30%), Positives = 43/86 (50%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTEL 216
           ++LEE L+  D    I + ++++L   +  G L +  ++  +L R +     +    T L
Sbjct: 28  EELEEILIGFD----IQYDLIESLLKHL--GDLITPKQLEVALLRFVRG--ESYYDKTRL 79

Query: 217 QLGFRKPAVIMIVGVNGGGKTXLARK 294
           +    KP V +IVGVNG GKT    K
Sbjct: 80  KTITTKPLVHLIVGVNGAGKTTTIAK 105



 Score = 23.1 bits (48), Expect(2) = 0.038
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  ++ KLA     +  K L+ AGDTF
Sbjct: 99  KTTTIAKLAKLSLKQHKKALLGAGDTF 125

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>SRPR_YEAST (P32916) Signal recognition particle receptor alpha subunit homolog|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 621

 Score = 31.2 bits (69), Expect(2) = 0.046
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 15/105 (14%)
 Frame = +1

Query: 10  NLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELL 189
           N +D   VL+ L + L+  +  P+ +  +   +  ++   K  + T +  + +  + + L
Sbjct: 307 NESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARESLTKAL 366

Query: 190 T---TKGSXTEL------------QLGFRKPAVIMIVGVNGGGKT 279
           T   T G   +L            + G   P V  IVGVNG GK+
Sbjct: 367 TQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKS 411



 Score = 22.7 bits (47), Expect(2) = 0.046
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 269 VERQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           V +  +L KLA        KVL+ A DTF
Sbjct: 408 VGKSTNLSKLAFWLLQNNFKVLIVACDTF 436

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>SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (Fragment)|
          Length = 451

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTK--GSX 207
           + +L+++L+ +D   K+ F + + +++ +++ K  +  E      + + + L+    G  
Sbjct: 29  IKELQKSLISADVNVKLVFSLTNKIKERLKNEKPPTYIERREWFIKIVYDELSNLFGGDK 88

Query: 208 TELQLGFRKPAVIMIVGVNGGGKTXLARK 294
               +  + P VIM+VGV G GKT  A K
Sbjct: 89  EPKVIPDKIPYVIMLVGVQGTGKTTTAGK 117

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>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 479

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASL-KRCILELLTTKGSXT 210
           L+++  ALL SD    +SF +V+ ++  I+  K+ +  ++ A   KR I+E    K    
Sbjct: 32  LNEITRALLQSD----VSFGLVEKMQTNIK--KIVNLDDLAAGHNKRLIIEQAIFKELCR 85

Query: 211 ELQLGF-------RKPAVIMIVGVNGGGKTXLARK 294
            L  G         KP+V+M VG+ G GKT    K
Sbjct: 86  MLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120

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>SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-four homolog)|
          Length = 516

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
 Frame = +1

Query: 19  DTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTK 198
           D   V  ++  ALL +D    +    +  +R      ++    +    + + + E LT  
Sbjct: 27  DVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAV 86

Query: 199 -GSXT-ELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            GS T E++   + P +IM+VG+ G GKT  A K
Sbjct: 87  LGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGK 120

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>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
 Frame = +1

Query: 40  DLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLT----TKGSX 207
           D++ AL+ +D   ++  ++   ++    + K  +G      + + + E LT    T+   
Sbjct: 34  DIQRALIQADVNVRLVLQLTREIQRRALEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP 93

Query: 208 TELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            E++    KP ++++VG+ G GKT    K
Sbjct: 94  IEIK---EKPTILLMVGIQGSGKTTTVAK 119

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>SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)|
          Length = 433

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCIL-----ELL 189
           + ++ +++ AL+ +D    ++ R V  + D I+   L        + K  IL     ELL
Sbjct: 25  EEMVKEIQRALIKAD----VNVRQVKEISDAIKKRALSEDVLPALNAKEQILKIVYEELL 80

Query: 190 TTKGSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
              G   E+ L   K A IM+VG+ G GKT    K
Sbjct: 81  RGVGEGLEIPL---KKAKIMLVGLQGSGKTTTTAK 112

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>SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)|
          Length = 445

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTK-- 198
           D+ ++D  + L +S     ++ ++V  L  +I+D   K         +   + ++  +  
Sbjct: 19  DKAVNDFIKELQISLIKSDVNVKLVSNLTQKIKDRLEKEKPPTAIERREWFISIVYDELS 78

Query: 199 ----GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
               G      +  + P VIM+VGV G GKT  A K
Sbjct: 79  KLFGGDINPEVMPKKIPYVIMLVGVQGSGKTTTAGK 114

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>SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-four homolog)|
          Length = 450

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = +1

Query: 10  NLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKL-KSGTEIXASLKRCILEL 186
           N+ DT R   ++ +ALL +D    +  + +  +  +    ++ KS T     +K    EL
Sbjct: 26  NIKDTIR---EVRKALLEADVTLSVIKKFIQNVSKKAIGHEINKSLTPGQEFIKIVKNEL 82

Query: 187 LTTKGSXT-ELQLGFRKPAVIMIVGVNGGGKT 279
           + + G    +L L  + PA+I++VG+ G GKT
Sbjct: 83  ILSMGEKNHDLNLSIQPPAIILVVGLQGVGKT 114

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>FTSY_THEAQ (P83749) Cell division protein ftsY|
          Length = 303

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGS 204
           + VL++LE ALL +D    +     + +  E+R    K   E        +LE    + +
Sbjct: 28  EEVLEELEMALLAAD----VGLSATEEILQEVRASGRKDLKEAVKEKLVGMLEPDERRAT 83

Query: 205 XTELQLGFRKPA-------VIMIVGVNGGGKTXLARK 294
             +L    +KP        V+++VGVNG GKT    K
Sbjct: 84  LRKLGFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAK 120

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>SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein homolog (SRP54)|
          Length = 522

 Score = 30.4 bits (67), Expect(2) = 0.21
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILE----LLT 192
           D +L ++  ALL +D   ++   +   ++ +I    L  G      +++ + +    L+ 
Sbjct: 29  DTLLKNICTALLETDVNVRLVQELRSNIKKKINVSTLPQGINGKRIVQKAVFDELCSLVD 88

Query: 193 TKGSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            K      + G  +P+VIM+VG+ G GKT    K
Sbjct: 89  PKVDAFTPKKG--RPSVIMMVGLQGSGKTTTCSK 120



 Score = 21.2 bits (43), Expect(2) = 0.21
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 275 RQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           +  +  KLA  +   G K  + A DTF
Sbjct: 114 KTTTCSKLALHYQRRGLKSCLVAADTF 140

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>SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54)|
          Length = 441

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSG-TEIXASLKRCILELLTTKG 201
           D  + DL+  L+ +D   K+   +   +++     +   G T     +K    EL+   G
Sbjct: 24  DAFVKDLQRELIKADVNVKLVLNVTRRIKERALKEEPPPGVTRRDWMIKIVYEELVKLFG 83

Query: 202 SXTELQLGFRK-PAVIMIVGVNGGGKTXLARK 294
              E Q+   K P ++++VGV G GKT  A K
Sbjct: 84  GDQEPQVDPPKTPWIVLLVGVQGSGKTTTAGK 115

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>SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)|
          Length = 455

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   TYWNLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCIL 180
           TY +      +  DL+  LL +D   +    I   +     + K   G      + + I 
Sbjct: 21  TYIDKNTVKEISKDLQRILLKADVNVQTVLNITKEMERRALEEKPPVGMAHQDYMVKIIY 80

Query: 181 E-LLTTKGSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
           E LL   G  + ++L   KP  IM+VG+ G GKT  A K
Sbjct: 81  EELLKILGEPSNVEL---KPQTIMLVGLYGHGKTTSAGK 116

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>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)|
          Length = 493

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTE----IXASLKRCILELLTTKG 201
           L+++  AL+ SD   K    +   +R  +    L +GT     I  S+ + + ++L T  
Sbjct: 31  LNEIARALMQSDVRFKTVCDLQANIRKTVNLEALAAGTNKRRIIETSVGKELCKMLDTGK 90

Query: 202 SXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
                + G  KP V+M VG+ G GKT    K
Sbjct: 91  PAFVPKKG--KPNVVMFVGLQGSGKTTTCTK 119

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>SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-four homolog)|
          Length = 451

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
 Frame = +1

Query: 10  NLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKL-KSGTEIXASLKRCILEL 186
           N+ +T R   ++ +ALL +D    +  + ++ ++ +    ++ KS T     +K    EL
Sbjct: 26  NIKETIR---EVRKALLEADVALSVIKKFIENVKKKSIGHEINKSLTPGQEFIKIVKHEL 82

Query: 187 LTTKGSXTE-LQLGFRKPAVIMIVGVNGGGKTXLARK 294
           +   G     L      PAVI++VG+ G GKT    K
Sbjct: 83  IFAMGEKNHSLNFSIEPPAVILVVGLQGSGKTTSLAK 119

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>FTSY_MYCPN (P75362) Cell division protein ftsY homolog|
          Length = 348

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASL-KRCILELLTTKGSXTE 213
           + L E L++ D     + +I D +  E++  ++     I   +  + I+  +  K   T+
Sbjct: 69  ESLFEELVLLDIGYHAATKICDAIVQELKLQRVSDPQLIQEIIVDKLIVYYIQDKLFETD 128

Query: 214 LQLGFRKPAVIMIVGVNGGGKTXLARKTCPQI 309
           L +   K  V + VGVNG GKT    K   Q+
Sbjct: 129 LTVEANKTNVYLFVGVNGVGKTTSLAKLADQL 160



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 269 VERQXSLGKLAHRFXNEGAKVLMAAGDTF 355
           V +  SL KLA +   +  +VLM AGDTF
Sbjct: 147 VGKTTSLAKLADQLTKQNKRVLMVAGDTF 175

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>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 497

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTT-----K 198
           L+++  ALL SD   K+   +   +R  +    L +GT     +++ +   L       K
Sbjct: 32  LNEISRALLQSDVQFKMVRDMQTNIRKIVNLETLAAGTNKRRIIQQAVFTELCNMLDPGK 91

Query: 199 GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            + T  +    KP+V+M VG+ G GKT    K
Sbjct: 92  PAFTPKK---GKPSVVMFVGLQGSGKTTTCTK 120

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>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 497

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTT-----K 198
           L+++  ALL SD   K+   +   +R  +    L +GT     +++ +   L       K
Sbjct: 32  LNEISRALLQSDVQFKMVRDMQTNIRKIVNLETLAAGTNKRRIIQQAVFTELCNMLDPGK 91

Query: 199 GSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            + T  +    KP+V+M VG+ G GKT    K
Sbjct: 92  PAFTTKK---GKPSVVMFVGLQGSGKTTTCTK 120

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>SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-four homolog)|
           (p48)
          Length = 453

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
 Frame = +1

Query: 25  DRVLDDLEE---ALLVSDFXPKISFRIVDTLRDEIRDGKL-KSGTEIXASLKRCILELLT 192
           D V D L E   ALL +D    +    ++ ++++    ++ KS T     +K    EL+ 
Sbjct: 25  DNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVA 84

Query: 193 TKGSXTE-LQLGFRKPAVIMIVGVNGGGKTXLARK 294
             G   + L L  + PAV+++ G+ G GKT    K
Sbjct: 85  AMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGK 119

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>SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-four homolog)|
          Length = 453

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
 Frame = +1

Query: 25  DRVLDDLEE---ALLVSDFXPKISFRIVDTLRDEIRDGKL-KSGTEIXASLKRCILELLT 192
           D V D L E   ALL +D    +    ++ ++++    ++ KS T     +K    EL+ 
Sbjct: 25  DNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVA 84

Query: 193 TKGSXTE-LQLGFRKPAVIMIVGVNGGGKTXLARK 294
             G   + L L  + PAV+++ G+ G GKT    K
Sbjct: 85  AMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGK 119

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>SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-four homolog)|
          Length = 453

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
 Frame = +1

Query: 25  DRVLDDLEE---ALLVSDFXPKISFRIVDTLRDEIRDGKL-KSGTEIXASLKRCILELLT 192
           D V D L E   ALL +D    +    ++ ++++    ++ KS T     +K    EL+ 
Sbjct: 25  DNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVA 84

Query: 193 TKGSXTE-LQLGFRKPAVIMIVGVNGGGKTXLARK 294
             G   + L L  + PAV+++ G+ G GKT    K
Sbjct: 85  AMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGK 119

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>DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460|
          Length = 1424

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = +1

Query: 112 DEIRDGKLKSGTEIXASLKRCILELLTTKGSXTELQLGFRKPAVIMIVGVNGGGKTXL 285
           D++  G+L    E   +L   +L       S  E+ +G  KPAVI +VG+ G GKT L
Sbjct: 161 DDLPQGRLVGRVEDKLALVNLLL-------SDDEISIG--KPAVISVVGMPGVGKTTL 209

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>SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-four homolog)|
          Length = 450

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 58  LVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTELQLGFRKP 237
           +V +F P I   ++    ++     L  G E+   +K+ +  +L  +     L L    P
Sbjct: 47  VVKNFIPSIQKSVIGNQVNK----SLTPGQELIKIVKKELTLILGKENHS--LNLSVTPP 100

Query: 238 AVIMIVGVNGGGKTXLARK 294
           A+I+++G+ G GKT    K
Sbjct: 101 AIILMIGLQGSGKTTTTAK 119

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>SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha subunit homolog|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
           (GTP-binding protein)
          Length = 614

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
 Frame = +1

Query: 10  NLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKS-----GTEIXASLKRC 174
           +LAD    L+ + + L+  +   +I+ ++ D++   + DGK         +++  +L   
Sbjct: 311 SLADLQPALEKMRDHLISKNVASEIAAKLCDSVAASL-DGKQMGTFDSIASQVKEALTES 369

Query: 175 ILELLTTKGSXTELQLGFR-----KPAVIMIVGVNGGGKTXLARKTC 300
           ++ +L+ K     ++         +P  I+  GVNG GK+    K C
Sbjct: 370 LVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKIC 416

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>Y2378_BACHD (Q9KAB2) UPF0144 protein BH2378|
          Length = 521

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = +1

Query: 13  LADTDRVLDDLEEALLVSDFXPKISFRIVDT-LRDEIRDGKLKSG--TEIXASLKRCILE 183
           L   D ++DD  EA+++S F P I   I  T L   ++DG++      E+    +R + E
Sbjct: 240 LTGIDLIIDDTPEAVILSGFDP-IRREIARTALEKLVQDGRIHPARIEEMVDKARREVDE 298

Query: 184 LLTTKGSXTELQLGFR--KPAVIMIVG 258
            +   G  T  ++G     P +I I+G
Sbjct: 299 AIREYGEQTTFEMGIHGLHPDLIKILG 325

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>SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein homolog (SRP54)|
          Length = 541

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCI--------L 180
           D +L  +  ALL SD    +  ++ + +R ++        +   A  K+ I         
Sbjct: 30  DVMLKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDELC 89

Query: 181 ELLTTKGSXTELQLGF-RKPAVIMIVGVNGGGKTXLARK 294
           +L+T +GS  +  +   RK  +IM VG+ G GKT    K
Sbjct: 90  KLVTCEGSEEKAFVPKKRKTNIIMFVGLQGSGKTTSCTK 128

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>SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)|
          Length = 447

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
 Frame = +1

Query: 31  VLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLT------ 192
           V+ D++ ALL +D   K+   +   +     + +  +G      L R + E L       
Sbjct: 29  VVRDVQRALLEADVDVKLVLELSKRIEKRALEEEPPAGVPKRDYLLRIVYEELVELLGGE 88

Query: 193 -TKGSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
            T+G   +L    R   VIM+VG+ G GKT  A K
Sbjct: 89  KTEGLDIDLS---RDVNVIMLVGLYGMGKTTTAAK 120

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>Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417|
          Length = 511

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
 Frame = +1

Query: 31  VLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSG--TEIXASLKRCILELLTTKGS 204
           V+DD  EA+++S F P         L   + DG++      E+ + +++ + E +   G 
Sbjct: 236 VVDDTPEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGK 295

Query: 205 XTELQLGFR--KPAVIMIVG 258
            T + LG     P +I I+G
Sbjct: 296 RTTIDLGIHGLHPELIRIIG 315

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>URK_STRP8 (Q8P0F8) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 208

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 226 FRKPAVIMIVGVNGGGKTXLAR 291
           F+KP +I + G +GGGKT ++R
Sbjct: 2   FKKPIIIGVTGGSGGGKTSVSR 23

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>SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)|
          Length = 444

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCIL-ELLTTKGSXT 210
           + +L+  L+ +D   ++   + D ++  I + K  S  E        +  EL    G   
Sbjct: 26  IKELQIILIKADVNVRLVKDLTDRIKKRITEEKPPSAIEKREWFISIVYDELSRLFGGDK 85

Query: 211 ELQLGFRK-PAVIMIVGVNGGGKTXLARK 294
           E ++  +K P +IM+VGV G GKT  + K
Sbjct: 86  EPEVMPKKLPYIIMLVGVQGSGKTTTSGK 114

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>SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein homolog (SRP54)|
          Length = 536

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
 Frame = +1

Query: 25  DRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELL----- 189
           D +L ++  ALL SD    ++ ++V  LR ++++      T   AS K+ I + L     
Sbjct: 28  DAMLKEVCSALLESD----VNIKLVSQLRQKVKNSV--KATPNGASKKKVIQKALFDELV 81

Query: 190 ------TTKGSXTELQLGFRKPAVIMIVGVNGGGKTXLARK 294
                  +  S  + +    K  V+M VG+ G GKT    K
Sbjct: 82  NLVGVDESAASAAKFKPQKGKSNVVMFVGLQGSGKTTSCTK 122

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>SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-four homolog)|
          Length = 462

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
 Frame = +1

Query: 34  LDDLEEALLVSDFX-PKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXT 210
           L ++  ALL +D   P +   I       + +   KS T     LK    EL    G   
Sbjct: 31  LREVRMALLEADVALPVVREFIAKVKESALGEEVNKSLTPGQEFLKIVQRELEKAMGEAN 90

Query: 211 E-LQLGFRKPAVIMIVGVNGGGKTXLARK 294
           E L L  + PAVI++ G+ G GKT    K
Sbjct: 91  ESLNLATQPPAVILMAGLQGAGKTTSVGK 119

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>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 495

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASL-KRCILELLTTKGSXT 210
           L+++  ALL SD    +SF +V  ++  I+  K+ +  ++ A   KR I+E         
Sbjct: 32  LNEITRALLQSD----VSFPLVKEMQTNIK--KIVNLEDLAAGHNKRRIIEQAIFSELCK 85

Query: 211 ELQLGFR-------KPAVIMIVGVNGGGKTXLARK 294
            L  G         KP V+M VG+ G GKT    K
Sbjct: 86  MLDPGKSAFAPKKAKPRVVMFVGLQGSGKTTTCTK 120

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>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog|
          Length = 534

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
 Frame = +1

Query: 10  NLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCIL--- 180
           N  D  +  DD+ + +  +     ++ R+V +LR  I+     +      + KR I    
Sbjct: 21  NNLDEKQAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSVNFASLPPAVNKKRLIQKAV 80

Query: 181 --ELLTTKGSXTELQLGFR----KPAVIMIVGVNGGGKTXLARK 294
             EL++      E    FR    +  VIM VG+ G GKT    K
Sbjct: 81  FDELVSLVDPHAE---PFRPKKGRSNVIMFVGLQGAGKTTTCTK 121

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>SYCP1_MESAU (Q60563) Synaptonemal complex protein 1 (SCP-1) (Meiotic chromosome|
           synaptic protein) (Fragment)
          Length = 845

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/74 (27%), Positives = 37/74 (50%)
 Frame = +1

Query: 13  LADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLT 192
           L   ++ + DLEE LLV+    +   + V+ L+ ++ + KLK+  E+ AS  +  LE   
Sbjct: 324 LQTREKEVHDLEEQLLVTKISDQNYSKQVEELKTKLEEEKLKN-AELTASCGKLSLENNK 382

Query: 193 TKGSXTELQLGFRK 234
                 ++ L  +K
Sbjct: 383 LTQETNDMALELKK 396

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>HS104_YEAST (P31539) Heat shock protein 104|
          Length = 908

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 229 RKPAVIMIVGVNGGGKTXLARK 294
           R+PA  + +G++G GKT LA+K
Sbjct: 605 RQPASFLFLGLSGSGKTELAKK 626

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>SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)|
          Length = 433

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 229 RKPAVIMIVGVNGGGKTXLARK 294
           +KP +++++GV G GKT  A K
Sbjct: 97  KKPYIVLLLGVEGSGKTTTAAK 118

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>URK1_YEAST (P27515) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
          Length = 501

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 22/75 (29%), Positives = 33/75 (44%)
 Frame = +1

Query: 85  SFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTELQLGFRKPAVIMIVGVN 264
           S   +  L DE RD  LK+   +   +     ++  TKG  +     +  P +I I G +
Sbjct: 12  SSSFISILDDETRD-TLKANAVMDGEV-----DVKKTKGKSSRYIPPWTTPYIIGIGGAS 65

Query: 265 GGGKTXLARKTCPQI 309
           G GKT +A K    I
Sbjct: 66  GSGKTSVAAKIVSSI 80

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>CBIO1_TREDE (Q73R11) Putative cobalt import ATP-binding protein cbiO 1|
          Length = 489

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 241 VIMIVGVNGGGKTXLARKTC 300
           +I I G NG GKT LAR  C
Sbjct: 296 IIAITGENGAGKTTLARTLC 315

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>Y1625_OCEIH (Q8EQR7) UPF0144 protein OB1625|
          Length = 520

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
 Frame = +1

Query: 1   TYWNLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSG--TEIXASLKRC 174
           T   L   D ++DD  EA+++S F P         L   ++DG++      E+    +R 
Sbjct: 235 TLETLTGIDLIIDDTPEAVILSGFDPIRREIARMALEKLVQDGRIHPARIEEMVEKSRRE 294

Query: 175 ILELLTTKGSXTELQLGFR--KPAVIMIVG 258
           + E +   G  T  ++G     P ++ I+G
Sbjct: 295 VDEYIREVGEETTFEVGVHGLHPDLVKILG 324

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>URK_OCEIH (Q8EPT5) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 210

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 229 RKPAVIMIVGVNGGGKTXLARKTC 300
           +KP VI + G +G GKT + R  C
Sbjct: 4   QKPVVIGVAGGSGSGKTSVTRSIC 27

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>NODQ_AZOBR (P28604) NodQ bifunctional enzyme (Nodulation protein Q) [Includes:|
           Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
           (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase
           large subunit); Adenylyl-sulfate kinase (EC 2.7.1.25)
           (APS kinase) (A
          Length = 620

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +1

Query: 85  SFRIVDTLRDE-IRDGKLKSGTEIXASLKRCILELLTTKGSXTELQLGFRKPAVIMIVGV 261
           SF +VD   +  +  G ++      A+L R  L + T + +  + Q    +PAV+   G+
Sbjct: 399 SFILVDRFSNRTVGAGMIRHPLRRAANLHRQELAVSTVERAALKRQ----RPAVLWFTGL 454

Query: 262 NGGGKTXLARK 294
           +G GK+ +A +
Sbjct: 455 SGSGKSTIANR 465

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>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 496

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 232 KPAVIMIVGVNGGGKTXLARK 294
           KP+V+M VG+ G GKT    K
Sbjct: 100 KPSVVMFVGLQGSGKTTTCTK 120

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>YMDA_BACSU (O31774) UPF0144 protein ymdA|
          Length = 520

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
 Frame = +1

Query: 1   TYWNLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSG--TEIXASLKRC 174
           T   L   D ++DD  EA+++S F P         L   ++DG++      E+    +R 
Sbjct: 235 TLETLTGIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRRE 294

Query: 175 ILELLTTKGSXTELQLGFR--KPAVIMIVG 258
           + + +   G  T  ++G     P +I I+G
Sbjct: 295 VDDYIREMGEQTTFEVGVHGLHPDLIKILG 324

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>Y2462_DEIRA (Q9RRM6) UPF0144 protein DR2462|
          Length = 572

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
 Frame = +1

Query: 10  NLADTDRVLDDLEEALLVSDFXP---KISFRIVDTLRDEIRDGKLKSGTEIXASLKRCIL 180
           +L   D ++DD  EA+++S F P   +++  ++D L   + DG++   T I   + +   
Sbjct: 290 SLTGVDLIIDDTPEAVILSSFNPLRREVARHVLDAL---VADGRIHP-TRIEEMVHKAQD 345

Query: 181 ELLT---TKGSXTELQLGF--RKPAVIMIVG 258
           ++ T    +G    ++ G    KP ++ ++G
Sbjct: 346 DMKTFIHQQGEEAAIEAGVVGLKPGLVQLLG 376

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>CCMA_BORPA (Q7W736) Cytochrome c biogenesis ATP-binding export protein ccmA|
           (EC 3.6.3.41) (Heme exporter protein A)
          Length = 224

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 184 LLTTKGSXTELQLGFRKPAVIMIVGVNGGGKTXLAR 291
           L+  +G    L L  R   ++ + G NG GKT L R
Sbjct: 16  LVGRRGGRRPLDLNLRPGQLVHVRGANGSGKTSLLR 51

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>CCMA_BORBR (Q7WIP8) Cytochrome c biogenesis ATP-binding export protein ccmA|
           (EC 3.6.3.41) (Heme exporter protein A)
          Length = 224

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 184 LLTTKGSXTELQLGFRKPAVIMIVGVNGGGKTXLAR 291
           L+  +G    L L  R   ++ + G NG GKT L R
Sbjct: 16  LVGRRGGRRPLDLNLRPGQLVHVRGANGSGKTSLLR 51

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>Y005_NPVOP (Q65371) Hypothetical 8.6 kDa protein (ORF7) (ORF 5)|
          Length = 77

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +1

Query: 160 SLKRCILELLTTKGSXTE----LQLGFRKPAVIMIVGVNGGGKTXL 285
           SL+R + EL T   +  +    L+ G R PAVI+    NGG  + L
Sbjct: 27  SLRRSVHELCTRSATGFDCNRFLEAGDRAPAVIVKAAANGGQHSSL 72

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>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 638

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 21/101 (20%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
 Frame = +1

Query: 19  DTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILE----L 186
           D + VLD + + L+  +    I+ ++ +++ +++    + + + + +++K+ + E    +
Sbjct: 337 DMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQI 396

Query: 187 LTTKGSXTELQ-----LGFRKPAVIMIVGVNGGGK-TXLAR 291
           L  +     L+        ++P V+   GVNG GK T LA+
Sbjct: 397 LQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAK 437

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>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 499

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 232 KPAVIMIVGVNGGGKTXLARK 294
           KP+++M VG+ G GKT    K
Sbjct: 100 KPSIVMFVGLQGSGKTTTCTK 120

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>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 25/85 (29%), Positives = 40/85 (47%)
 Frame = +1

Query: 37  DDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTEL 216
           D L +A+ V +  PK+ F+ V  L ++IR        EI  ++      +L  K      
Sbjct: 122 DPLVKAMEVEE-RPKVFFKDVGGLEEQIR--------EIYEAV------VLPIKNPHLFR 166

Query: 217 QLGFRKPAVIMIVGVNGGGKTXLAR 291
           +LG   P  +++ G  G GKT LA+
Sbjct: 167 ELGIDPPKGVLLHGPPGTGKTLLAK 191

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>CBIO3_STAAW (Q8NUH8) Putative cobalt import ATP-binding protein cbiO 3|
          Length = 570

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 214 LQLGFRKPAVIMIVGVNGGGKTXLARKTC 300
           +QL   +  ++ IVG NG GK+ LA+  C
Sbjct: 324 VQLNVYRREMLSIVGHNGAGKSTLAKAIC 352

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>CBIO3_STAAS (Q6G5Z1) Putative cobalt import ATP-binding protein cbiO 3|
          Length = 570

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 214 LQLGFRKPAVIMIVGVNGGGKTXLARKTC 300
           +QL   +  ++ IVG NG GK+ LA+  C
Sbjct: 324 VQLNVYRREMLSIVGHNGAGKSTLAKAIC 352

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>CBIO3_STAAR (Q6GDC0) Putative cobalt import ATP-binding protein cbiO 3|
          Length = 570

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 214 LQLGFRKPAVIMIVGVNGGGKTXLARKTC 300
           +QL   +  ++ IVG NG GK+ LA+  C
Sbjct: 324 VQLNVYRREMLSIVGHNGAGKSTLAKAIC 352

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>CBIO3_STAAN (Q7A342) Putative cobalt import ATP-binding protein cbiO 3|
          Length = 570

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 214 LQLGFRKPAVIMIVGVNGGGKTXLARKTC 300
           +QL   +  ++ IVG NG GK+ LA+  C
Sbjct: 324 VQLNVYRREMLSIVGHNGAGKSTLAKAIC 352

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>CBIO3_STAAM (Q99QV7) Putative cobalt import ATP-binding protein cbiO 3|
          Length = 570

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 214 LQLGFRKPAVIMIVGVNGGGKTXLARKTC 300
           +QL   +  ++ IVG NG GK+ LA+  C
Sbjct: 324 VQLNVYRREMLSIVGHNGAGKSTLAKAIC 352

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>CBIO3_STAAC (Q5HCL3) Putative cobalt import ATP-binding protein cbiO 3|
          Length = 570

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 214 LQLGFRKPAVIMIVGVNGGGKTXLARKTC 300
           +QL   +  ++ IVG NG GK+ LA+  C
Sbjct: 324 VQLNVYRREMLSIVGHNGAGKSTLAKAIC 352

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>URK_STRP6 (Q5XBI8) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 208

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 229 RKPAVIMIVGVNGGGKTXLAR 291
           +KP +I + G +GGGKT ++R
Sbjct: 3   KKPIIIGVTGGSGGGKTSVSR 23

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>URK_STRP3 (P67416) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 208

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 229 RKPAVIMIVGVNGGGKTXLAR 291
           +KP +I + G +GGGKT ++R
Sbjct: 3   KKPIIIGVTGGSGGGKTSVSR 23

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>URK_STRP1 (P67415) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 208

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 229 RKPAVIMIVGVNGGGKTXLAR 291
           +KP +I + G +GGGKT ++R
Sbjct: 3   KKPIIIGVTGGSGGGKTSVSR 23

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
 Frame = +1

Query: 85  SFRIVDTLRDEIRDGKLKSGTEIX--ASLKRCILELLT----TKGSXTELQLGFRKPAVI 246
           +F  +   R  I DGK+  G      A +    LE+       K     LQLG + P   
Sbjct: 286 AFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGA 345

Query: 247 MIVGVNGGGKTXLAR 291
           +++G  G GKT LA+
Sbjct: 346 LLLGPPGCGKTLLAK 360

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>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)|
          Length = 495

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
 Frame = +1

Query: 34  LDDLEEALLVSDFXPKISFRIVDTLRDEIRDGKLKSGTEIXASL-KRCILELLTTKGSXT 210
           L+++  ALL SD    +SF +V  ++  I+  K+ +  ++ A   KR I+E         
Sbjct: 32  LNEITRALLQSD----VSFPLVKEMQSNIK--KIVNLEDLAAGHNKRRIIEQAIFSELCK 85

Query: 211 ELQLGF-------RKPAVIMIVGVNGGGKTXLARK 294
            L  G         K +V+M VG+ G GKT    K
Sbjct: 86  MLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

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>POLN_LORDV (P54634) Non-structural polyprotein [Contains: p48; Helicase|
           (2C-like protein) (P2C); 3A-like protein; Viral
           genome-linked protein (VPg); Thiol protease P3C (EC
           3.4.22.-) (3C-like protease) (3C-pro); RNA-directed RNA
           polymerase (EC 2.7.7.48)]
          Length = 1699

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 232 KPAVIMIVGVNGGGKTXLARKTCPQI 309
           +P V+MI G  G GKT LAR+   +I
Sbjct: 487 RPVVVMISGKPGIGKTHLARELAKRI 512

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>MSH6_YEAST (Q03834) MutS protein homolog 6|
          Length = 1242

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 211  ELQLGFRKPAVIMIVGVNGGGKTXLARKTC 300
            +++LG  +P + ++ G N  GK+ + R  C
Sbjct: 967  DIELGKEQPRLGLLTGANAAGKSTILRMAC 996

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>AFAD_HUMAN (P55196) Afadin (AF-6 protein)|
          Length = 1816

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 246 DNRRLPEA-KLQLSXAALGREQLEDASFQRRLYLGPGLE 133
           D+R  P+  +LQLS   +G E+L+D S Q     GPG++
Sbjct: 395 DSRDKPKLYRLQLSVTEVGTEKLDDNSIQ---LFGPGIQ 430

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>ZNUC_HAEIN (P44692) High-affinity zinc uptake system ATP-binding protein znuC|
          Length = 268

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 196 KGSXTELQLGFRKPAVIMIVGVNGGGKTXLAR 291
           K +  ++ L     ++I IVG NGGGK+ L +
Sbjct: 28  KTALQDINLNIYPNSIITIVGPNGGGKSTLLK 59

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>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = +1

Query: 82  ISFRIVDTLRDEIRDGKLKSGTEIXASLKRCILELLTTKGSXTELQLGFRKPAVIMIVGV 261
           ISF  V  L ++IR+              R ++EL   K     L++G + P  +++ G 
Sbjct: 129 ISFAGVGGLNEQIRE-------------LREVIEL-PLKNPELFLRVGIKPPKGVLLYGP 174

Query: 262 NGGGKTXLAR 291
            G GKT LAR
Sbjct: 175 PGTGKTLLAR 184

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>DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1427

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 4    YWNLADTDRVLDDLEEALLVSDFXPKISFRIVDTLRDEIRDGK 132
            Y  L D     DD+   L+  D  PKI+F    T+ +++R GK
Sbjct: 1184 YTTLKDCIATRDDIMTYLIQKDLPPKIAF----TIMEKVRKGK 1222

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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 217 QLGFRKPAVIMIVGVNGGGKTXLAR 291
           +LG R P  +++VG  G GKT LAR
Sbjct: 228 RLGGRLPKGVLLVGPPGTGKTLLAR 252

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>CBIO3_LACJO (Q74I62) Putative cobalt import ATP-binding protein cbiO 3|
          Length = 573

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +1

Query: 244 IMIVGVNGGGKTXLARKTC 300
           I IVG NG GKT L R  C
Sbjct: 333 ISIVGQNGAGKTTLCRTIC 351


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,828,502
Number of Sequences: 219361
Number of extensions: 450736
Number of successful extensions: 2738
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2733
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result