ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ549215.1|ZMA549215 Zea mays mRNA for chloroplast SRP recep... 329 4e-87
2ref|NM_189333.1| Oryza sativa (japonica cultivar-group), predic... 327 1e-86
3dbj|AK103090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 3e-84
4dbj|AK058574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 3e-84
5dbj|AK109369.2| Oryza sativa (japonica cultivar-group) cDNA clon... 305 5e-80
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 96 9e-17
7dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 96 9e-17
8dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic D... 96 9e-17
9ref|NM_130140.2| Arabidopsis thaliana CPFTSY; GTP binding / RNA ... 64 3e-07
10gb|AY051026.1| Arabidopsis thaliana putative signal recognition ... 64 3e-07
11gb|AF360125.1| Arabidopsis thaliana putative signal recognition ... 64 3e-07
12emb|AJ010820.1|ATH010820 Arabidopsis thaliana mRNA for chloropla... 64 3e-07
13emb|BX819043.1|CNS0A7Y2 Arabidopsis thaliana Full-length cDNA Co... 64 3e-07
14gb|AF120112.1|AF120112 Arabidopsis thaliana chloroplast SRP rece... 64 3e-07
15emb|BX819323.1|CNS0A8Z3 Arabidopsis thaliana Full-length cDNA Co... 56 8e-05
16gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.2
17emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.2
18gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map... 42 1.2
19gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.2
20emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.2
21gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete... 42 1.2
22gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.2
23gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome... 40 4.7
24ref|XM_953786.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.7
25ref|XM_327671.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.7
26gb|AC121286.7| Mus musculus chromosome 12, clone RP23-36H21, com... 40 4.7
27gb|AC126243.3| Mus musculus BAC clone RP24-260I19 from chromosom... 40 4.7
28emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 4.7
29gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasm... 40 4.7
30gb|AC135641.7| Mus musculus BAC clone RP23-376H20 from 12, compl... 40 4.7
31gb|AC161464.3| Gallus gallus BAC clone CH261-163N1 from chromoso... 40 4.7 
>emb|AJ549215.1|ZMA549215 Zea mays mRNA for chloroplast SRP receptor cpFtsY precursor (csr1
           gene)
          Length = 1699

 Score =  329 bits (166), Expect = 4e-87
 Identities = 305/352 (86%), Gaps = 1/352 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tactggaacctcgccgacaccgaccgngtcctcgacgatctcgaggaggcgctgctggtg 63
           ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| 
Sbjct: 290 tactggaaccttgccgacaccgaccgcgtcctcgacgacctcgaggaggcgctgctggtc 349

                                                                       
Query: 64  tcggacttcnggcccaagatctcgttccggatcgtcgacaccctccgcgacgagatccgn 123
           ||||||||| | ||||| ||||| ||||||||||||||||| |||||||| |||||||| 
Sbjct: 350 tcggacttcggacccaaaatctcattccggatcgtcgacacgctccgcgaggagatccgc 409

                                                                       
Query: 124 gacggcaagctcaagtccgggaccgagatanaggcgtcgctgaaaagatgcatcctcgag 183
           ||||||||||||||||| ||  |||||||| ||||  |||||||||| |||||||| || 
Sbjct: 410 gacggcaagctcaagtctggcgccgagataaaggccgcgctgaaaaggtgcatcctggaa 469

                                                                       
Query: 184 ctgctcacgaccaagggcagcangactgagctgcagcttggcttcaggaagccggcggtt 243
           ||||| |||| ||||||| |||   | |||||  | || || |||||||||||||| || 
Sbjct: 470 ctgctgacgagcaagggcggcaactcggagctcaatctcggattcaggaagccggctgtc 529

                                                                       
Query: 244 atcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgccca 303
           ||||||||||||||||||||||| || |||||||| | |||||||||| || |||||  |
Sbjct: 530 atcatgatcgtgggagtgaatggcgggggaaagacga-cctcgctagggaagcttgctta 588

                                                               
Query: 304 cagatttaanaatgaaggagcgaaggtattgatggcagcaggtgataccttc 355
           ||| ||||| || |||||||  ||||||||||||||||||||||||||||||
Sbjct: 589 caggtttaagaacgaaggagtcaaggtattgatggcagcaggtgataccttc 640
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>ref|NM_189333.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1092

 Score =  327 bits (165), Expect = 1e-86
 Identities = 307/355 (86%), Gaps = 1/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctactggaacctcgccgacaccgaccgngtcctcgacgatctcgaggaggcgctgctg 60
           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 247 acctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggcgctgctg 306

                                                                       
Query: 61  gtgtcggacttcnggcccaagatctcgttccggatcgtcgacaccctccgcgacgagatc 120
           |||||||| ||  | |||||||| |||||||||||||| ||||| || ||||| || |||
Sbjct: 307 gtgtcggattttggccccaagatttcgttccggatcgtggacactctacgcgaggaaatc 366

                                                                       
Query: 121 cgngacggcaagctcaagtccgggaccgagatanaggcgtcgctgaaaagatgcatcctc 180
           || || |||||||||||||| ||| | |||||| |||   |||||||||| || || || 
Sbjct: 367 cgcgatggcaagctcaagtctggggctgagataaaggaagcgctgaaaaggtgtattctt 426

                                                                       
Query: 181 gagctgctcacgaccaagggcagcangactgagctgcagcttggcttcaggaagccggcg 240
           || ||||| |||| ||| ||| |||   | ||||||||||| || ||||| |||||||| 
Sbjct: 427 gaactgctgacgagcaaaggcggcaatccggagctgcagctcggtttcagaaagccggca 486

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||||||||| |||||||||||||||||||||||||| | ||||  |||||||||||||
Sbjct: 487 gttatcatgattgtgggagtgaatggaggtggaaagacta-cctcattaggaaaacttgc 545

                                                                  
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgataccttc 355
             ||||||| || |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 546 ttacagattcaagaatgaaggagtgaaggtattgatggcagcaggtgataccttc 600
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>dbj|AK103090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118J07, full
           insert sequence
          Length = 1221

 Score =  319 bits (161), Expect = 3e-84
 Identities = 306/355 (86%), Gaps = 1/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctactggaacctcgccgacaccgaccgngtcctcgacgatctcgaggaggcgctgctg 60
           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 202 acctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggctctgctg 261

                                                                       
Query: 61  gtgtcggacttcnggcccaagatctcgttccggatcgtcgacaccctccgcgacgagatc 120
           |||||||| ||  | |||||||| |||||||||||||| ||||| || ||||| || |||
Sbjct: 262 gtgtcggattttggccccaagatttcgttccggatcgtggacactctacgcgaggaaatc 321

                                                                       
Query: 121 cgngacggcaagctcaagtccgggaccgagatanaggcgtcgctgaaaagatgcatcctc 180
           || || |||||||||||||| ||| | |||||| |||   |||||||||| || || || 
Sbjct: 322 cgcgatggcaagctcaagtctggggctgagataaaggaagcgctgaaaaggtgtattctt 381

                                                                       
Query: 181 gagctgctcacgaccaagggcagcangactgagctgcagcttggcttcaggaagccggcg 240
           || ||||| |||| ||| ||| |||   | ||||||||||| || ||||| |||||||| 
Sbjct: 382 gaactgctgacgagcaaaggcggcaatccggagctgcagctcggtttcagaaagccggca 441

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||||||||| |||||||||||||||||||||||||| | ||||  |||||||||||||
Sbjct: 442 gttatcatgattgtgggagtgaatggaggtggaaagacta-cctcattaggaaaacttgc 500

                                                                  
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgataccttc 355
             ||||||| || |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 ttacagattcaagaatgaaggagtgaaggtattgatggcagcaggtgataccttc 555
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>dbj|AK058574.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E11, full
           insert sequence
          Length = 1344

 Score =  319 bits (161), Expect = 3e-84
 Identities = 306/355 (86%), Gaps = 1/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctactggaacctcgccgacaccgaccgngtcctcgacgatctcgaggaggcgctgctg 60
           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 310 acctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggctctgctg 369

                                                                       
Query: 61  gtgtcggacttcnggcccaagatctcgttccggatcgtcgacaccctccgcgacgagatc 120
           |||||||| ||  | |||||||| |||||||||||||| ||||| || ||||| || |||
Sbjct: 370 gtgtcggattttggccccaagatttcgttccggatcgtggacactctacgcgaggaaatc 429

                                                                       
Query: 121 cgngacggcaagctcaagtccgggaccgagatanaggcgtcgctgaaaagatgcatcctc 180
           || || |||||||||||||| ||| | |||||| |||   |||||||||| || || || 
Sbjct: 430 cgcgatggcaagctcaagtctggggctgagataaaggaagcgctgaaaaggtgtattctt 489

                                                                       
Query: 181 gagctgctcacgaccaagggcagcangactgagctgcagcttggcttcaggaagccggcg 240
           || ||||| |||| ||| ||| |||   | ||||||||||| || ||||| |||||||| 
Sbjct: 490 gaactgctgacgagcaaaggcggcaatccggagctgcagctcggtttcagaaagccggca 549

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||||||||| |||||||||||||||||||||||||| | ||||  |||||||||||||
Sbjct: 550 gttatcatgattgtgggagtgaatggaggtggaaagacta-cctcattaggaaaacttgc 608

                                                                  
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgataccttc 355
             ||||||| || |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 609 ttacagattcaagaatgaaggagtgaaggtattgatggcagcaggtgataccttc 663
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>dbj|AK109369.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D11, full
           insert sequence
          Length = 1308

 Score =  305 bits (154), Expect = 5e-80
 Identities = 305/355 (85%), Gaps = 3/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctactggaacctcgccgacaccgaccgngtcctcgacgatctcgaggaggcgctgctg 60
           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 291 acctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggctctgctg 350

                                                                       
Query: 61  gtgtcggacttcnggcccaagatctcgttccggatcgtcgacaccctccgcgacgagatc 120
           |||||||| ||  | |||||||| |||||||||||||  ||||| || ||||| || |||
Sbjct: 351 gtgtcggattttggccccaagatttcgttccggatcg--gacactctacgcgaggaaatc 408

                                                                       
Query: 121 cgngacggcaagctcaagtccgggaccgagatanaggcgtcgctgaaaagatgcatcctc 180
           || || |||||||||||||| ||| | |||||| |||   |||||||||| || || || 
Sbjct: 409 cgcgatggcaagctcaagtctggggctgagataaaggaagcgctgaaaaggtgtattctt 468

                                                                       
Query: 181 gagctgctcacgaccaagggcagcangactgagctgcagcttggcttcaggaagccggcg 240
           || ||||| |||| ||| ||| |||   | ||||||||||| || ||||| |||||||| 
Sbjct: 469 gaactgctgacgagcaaaggcggcaatccggagctgcagctcggtttcagaaagccggca 528

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||||||||| |||||||||||||||||||||||||| | ||||  |||||||||||||
Sbjct: 529 gttatcatgattgtgggagtgaatggaggtggaaagacta-cctcattaggaaaacttgc 587

                                                                  
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgataccttc 355
             ||||||| || |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 588 ttacagattcaagaatgaaggagtgaaggtattgatggcagcaggtgataccttc 642
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1        acctactggaacctcgccgacaccgaccgngtcctcgacgatctcgaggaggcgc 55
                ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 42229507 acctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggcgc 42229453



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                            
Query: 50       aggcgctgctggtgtcggacttcnggcccaagatctcgttccggatcgtcgacaccctcc 109
                |||| |||||||||||||| ||  | |||||||| |||||||||||||| ||||| || |
Sbjct: 42229347 aggctctgctggtgtcggattttggccccaagatttcgttccggatcgtggacactctac 42229288

                                                                
Query: 110      gcgacgagatccgngacggcaagctcaagtccgggaccgagatanagg 157
                |||| || ||||| || |||||||||||||| ||| | |||||| |||
Sbjct: 42229287 gcgaggaaatccgcgatggcaagctcaagtctggggctgagataaagg 42229240



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 232      aagccggcggttatcatgatcgtgggagtgaatggaggtggaaagac 278
                |||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 42228989 aagccggcagttatcatgattgtgggagtgaatggaggtggaaagac 42228943



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                             
Query: 327      aggtattgatggcagcaggtgataccttc 355
                |||||||||||||||||||||||||||||
Sbjct: 42228178 aggtattgatggcagcaggtgataccttc 42228150



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 288      taggaaaacttgcccacagatttaanaatgaaggagcgaaggt 330
                |||||||||||||  ||||||| || |||||||||| ||||||
Sbjct: 42228375 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 42228333
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0401G10
          Length = 160704

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                   
Query: 1    acctactggaacctcgccgacaccgaccgngtcctcgacgatctcgaggaggcgc 55
            ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1464 acctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggcgc 1410



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                        
Query: 50   aggcgctgctggtgtcggacttcnggcccaagatctcgttccggatcgtcgacaccctcc 109
            |||| |||||||||||||| ||  | |||||||| |||||||||||||| ||||| || |
Sbjct: 1304 aggctctgctggtgtcggattttggccccaagatttcgttccggatcgtggacactctac 1245

                                                            
Query: 110  gcgacgagatccgngacggcaagctcaagtccgggaccgagatanagg 157
            |||| || ||||| || |||||||||||||| ||| | |||||| |||
Sbjct: 1244 gcgaggaaatccgcgatggcaagctcaagtctggggctgagataaagg 1197



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 232 aagccggcggttatcatgatcgtgggagtgaatggaggtggaaagac 278
           |||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 946 aagccggcagttatcatgattgtgggagtgaatggaggtggaaagac 900



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 327 aggtattgatggcagcaggtgataccttc 355
           |||||||||||||||||||||||||||||
Sbjct: 135 aggtattgatggcagcaggtgataccttc 107



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 288 taggaaaacttgcccacagatttaanaatgaaggagcgaaggt 330
           |||||||||||||  ||||||| || |||||||||| ||||||
Sbjct: 332 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 290
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>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1294_F06
          Length = 121088

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                     
Query: 1      acctactggaacctcgccgacaccgaccgngtcctcgacgatctcgaggaggcgc 55
              ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 102705 acctactggaacctcgccgacaccgaccgcgtcctcgacgagctcgaggaggcgc 102651



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                          
Query: 50     aggcgctgctggtgtcggacttcnggcccaagatctcgttccggatcgtcgacaccctcc 109
              |||| |||||||||||||| ||  | |||||||| |||||||||||||| ||||| || |
Sbjct: 102545 aggctctgctggtgtcggattttggccccaagatttcgttccggatcgtggacactctac 102486

                                                              
Query: 110    gcgacgagatccgngacggcaagctcaagtccgggaccgagatanagg 157
              |||| || ||||| || |||||||||||||| ||| | |||||| |||
Sbjct: 102485 gcgaggaaatccgcgatggcaagctcaagtctggggctgagataaagg 102438



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                             
Query: 232    aagccggcggttatcatgatcgtgggagtgaatggaggtggaaagac 278
              |||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 102187 aagccggcagttatcatgattgtgggagtgaatggaggtggaaagac 102141



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                           
Query: 327    aggtattgatggcagcaggtgataccttc 355
              |||||||||||||||||||||||||||||
Sbjct: 101376 aggtattgatggcagcaggtgataccttc 101348



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 288    taggaaaacttgcccacagatttaanaatgaaggagcgaaggt 330
              |||||||||||||  ||||||| || |||||||||| ||||||
Sbjct: 101573 taggaaaacttgcttacagattcaagaatgaaggagtgaaggt 101531
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>ref|NM_130140.2| Arabidopsis thaliana CPFTSY; GTP binding / RNA binding /
           nucleoside-triphosphatase/ nucleotide binding AT2G45770
           (CPFTSY) mRNA, complete cds
          Length = 1438

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 92/111 (82%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||| ||||| || |||||||| |||||||| ||||| | | || || ||||| || ||
Sbjct: 526 gttataatgattgttggagtgaacggaggtgggaagacga-catctcttggaaagctggc 584

                                                              
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgatac 351
            || ||||| || ||||||||| | |||||||| |||||||||||||||||
Sbjct: 585 tcatagattgaaaaatgaaggaactaaggtattaatggcagcaggtgatac 635
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>gb|AY051026.1| Arabidopsis thaliana putative signal recognition particle receptor
           alpha subunit (At2g45770) mRNA, complete cds
          Length = 1132

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 92/111 (82%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||| ||||| || |||||||| |||||||| ||||| | | || || ||||| || ||
Sbjct: 496 gttataatgattgttggagtgaacggaggtgggaagacga-catctcttggaaagctggc 554

                                                              
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgatac 351
            || ||||| || ||||||||| | |||||||| |||||||||||||||||
Sbjct: 555 tcatagattgaaaaatgaaggaactaaggtattaatggcagcaggtgatac 605
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>gb|AF360125.1| Arabidopsis thaliana putative signal recognition particle receptor
           alpha subunit (At2g45770) mRNA, complete cds
          Length = 1454

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 92/111 (82%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||| ||||| || |||||||| |||||||| ||||| | | || || ||||| || ||
Sbjct: 526 gttataatgattgttggagtgaacggaggtgggaagacga-catctcttggaaagctggc 584

                                                              
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgatac 351
            || ||||| || ||||||||| | |||||||| |||||||||||||||||
Sbjct: 585 tcatagattgaaaaatgaaggaactaaggtattaatggcagcaggtgatac 635
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>emb|AJ010820.1|ATH010820 Arabidopsis thaliana mRNA for chloroplast FtsY homolog
          Length = 1374

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 92/111 (82%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||| ||||| || |||||||| |||||||| ||||| | | || || ||||| || ||
Sbjct: 506 gttataatgattgttggagtgaacggaggtgggaagacga-catctcttggaaagctggc 564

                                                              
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgatac 351
            || ||||| || ||||||||| | |||||||| |||||||||||||||||
Sbjct: 565 tcatagattgaaaaatgaaggaactaaggtattaatggcagcaggtgatac 615
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>emb|BX819043.1|CNS0A7Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZA07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1451

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 92/111 (82%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||| ||||| || |||||||| |||||||| ||||| | | || || ||||| || ||
Sbjct: 506 gttataatgattgttggagtgaacggaggtgggaagacga-catctcttggaaagctggc 564

                                                              
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgatac 351
            || ||||| || ||||||||| | |||||||| |||||||||||||||||
Sbjct: 565 tcatagattgaaaaatgaaggaactaaggtattaatggcagcaggtgatac 615
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>gb|AF120112.1|AF120112 Arabidopsis thaliana chloroplast SRP receptor homolog, alpha
           subunit CPFTSY mRNA, complete cds
          Length = 1103

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 92/111 (82%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 241 gttatcatgatcgtgggagtgaatggaggtggaaagacaancctcgctaggaaaacttgc 300
           ||||| ||||| || |||||||| |||||||| ||||| | | || || ||||| || ||
Sbjct: 496 gttataatgattgttggagtgaacggaggtgggaagacga-catctcttggaaagctggc 554

                                                              
Query: 301 ccacagatttaanaatgaaggagcgaaggtattgatggcagcaggtgatac 351
            || ||||| || ||||||||| | |||||||| |||||||||||||||||
Sbjct: 555 tcatagattgaaaaatgaaggaactaaggtattaatggcagcaggtgatac 605
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>emb|BX819323.1|CNS0A8Z3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB68ZF02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1356

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 305 agatttaanaatgaaggagcgaaggtattgatggcagcaggtgatac 351
           ||||| || ||||||||| | |||||||| |||||||||||||||||
Sbjct: 570 agattgaaaaatgaaggaactaaggtattaatggcagcaggtgatac 616
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     acgatctcgaggaggcgctgc 58
              |||||||||||||||||||||
Sbjct: 621021 acgatctcgaggaggcgctgc 621001
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 38      acgatctcgaggaggcgctgc 58
               |||||||||||||||||||||
Sbjct: 1940749 acgatctcgaggaggcgctgc 1940729
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>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete
             sequence
          Length = 101647

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 327   aggtattgatggcagcaggtgatac 351
             ||||||| |||||||||||||||||
Sbjct: 74511 aggtattaatggcagcaggtgatac 74487
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 38     acgatctcgaggaggcgctgc 58
              |||||||||||||||||||||
Sbjct: 574556 acgatctcgaggaggcgctgc 574576
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 245     tcatgatcgtgggagtgaatggagg 269
               ||||||||||||| |||||||||||
Sbjct: 3571475 tcatgatcgtgggcgtgaatggagg 3571451
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>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence
          Length = 136080

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 207  gactgagctgcagcttggctt 227
            |||||||||||||||||||||
Sbjct: 7052 gactgagctgcagcttggctt 7072
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 38      acgatctcgaggaggcgctgc 58
               |||||||||||||||||||||
Sbjct: 1152421 acgatctcgaggaggcgctgc 1152441
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>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence
          Length = 210969

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    cagcttggcttcaggaagcc 236
              ||||||||||||||||||||
Sbjct: 114327 cagcttggcttcaggaagcc 114308
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>ref|XM_953786.1| Neurospora crassa OR74A hypothetical protein (NCU07386.1) partial
           mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  cgtcgacaccctccgcgacgagat 119
           ||||||||| ||||||||||||||
Sbjct: 450 cgtcgacacgctccgcgacgagat 473
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>ref|XM_327671.1| Neurospora crassa OR74A hypothetical protein (NCU07386.1) partial
           mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  cgtcgacaccctccgcgacgagat 119
           ||||||||| ||||||||||||||
Sbjct: 450 cgtcgacacgctccgcgacgagat 473
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>gb|AC121286.7| Mus musculus chromosome 12, clone RP23-36H21, complete sequence
          Length = 227648

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 181   gagctgctcacgaccaagggcagc 204
             ||||||||||| ||||||||||||
Sbjct: 27769 gagctgctcaccaccaagggcagc 27792
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>gb|AC126243.3| Mus musculus BAC clone RP24-260I19 from chromosome 14, complete sequence
          Length = 180553

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    cagcttggcttcaggaagcc 236
              ||||||||||||||||||||
Sbjct: 178423 cagcttggcttcaggaagcc 178442
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     aagatctcgttccggatcgtcgac 102
              |||||| |||||||||||||||||
Sbjct: 260720 aagatcacgttccggatcgtcgac 260697
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>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete
            sequence
          Length = 96742

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 14   tcgccgacaccgaccgngtcctcgacg 40
            ||||||||||||||||  |||||||||
Sbjct: 8711 tcgccgacaccgaccgcctcctcgacg 8737
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>gb|AC135641.7| Mus musculus BAC clone RP23-376H20 from 12, complete sequence
          Length = 171371

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 181    gagctgctcacgaccaagggcagc 204
              ||||||||||| ||||||||||||
Sbjct: 137839 gagctgctcaccaccaagggcagc 137862
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>gb|AC161464.3| Gallus gallus BAC clone CH261-163N1 from chromosome ul, complete
             sequence
          Length = 149167

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   atcgtgggagtgaatggagg 269
             ||||||||||||||||||||
Sbjct: 12769 atcgtgggagtgaatggagg 12788


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,813,252
Number of Sequences: 3902068
Number of extensions: 1813252
Number of successful extensions: 32557
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32303
Number of HSP's gapped (non-prelim): 247
length of query: 355
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 333
effective length of database: 17,147,199,772
effective search space: 5710017524076
effective search space used: 5710017524076
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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