| Clone Name | bags7d04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093J18, full insert sequence Length = 1094 Score = 305 bits (154), Expect = 8e-80 Identities = 388/466 (83%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| | ||||| | || |||| |||| ||||||||| Sbjct: 56 gtgtgcgtcaccggcgccggggggttcatggcctcgtcgcacgtcgagctgctcctctcc 115 Query: 104 aaggcccactacactgtccgcggcaccgtgcgcgatcccggtaatgctaagaatgctcat 163 || ||||| | ||||||||||||||||| ||||| ||| |||| ||||||| |||| Sbjct: 116 cgggggaactacgcggtccgcggcaccgtgcgggatccaggtgatgccaagaatgatcat 175 Query: 164 ctcaaggcgctagaaggtgctggggaaaggctgcagctgctcagcgctgacctgctggac 223 |||| ||||||| ||||||| | ||| ||| |||||||||||| ||||| ||| ||||| Sbjct: 176 ctcagggcgctacaaggtgccgaggagaggttgcagctgctcaaggctgatctgttggac 235 Query: 224 tacgacagcattgcgtcggcggttgctggctgtgagggcgtcttccatgttgctagccct 283 || ||||| | || || |||||||| ||||||||||||||||||||||| || |||||| Sbjct: 236 tatgacagtgtagcttcagcggttgccggctgtgagggcgtcttccatgtcgccagccct 295 Query: 284 gtcccttctggtagatcgaccaaccctgaggaagaagttatagcccctgctgtaacaggc 343 || || || || |||| ||||||||||||| ||| || ||||| ||||||||||||||| Sbjct: 296 gtaccctcgggccgatccaccaaccctgaggtagaggtcatagctcctgctgtaacaggc 355 Query: 344 acactgaatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtct 403 ||||| |||||||||||||| ||| | |||||||||||||||||||||||||| |||||| Sbjct: 356 acacttaatgtgttgaaggcctgccatgaggcaaaagttaagcgagttgtcatggtgtct 415 Query: 404 tcatgtgctgctgtgttcaacaatcctaactggcccaagggcaaagtatttactgaagac 463 || |||||| ||||||| |||||||||||||| |||| || | || ||||||||| Sbjct: 416 tccattgctgccgtgttcagtaatcctaactggccaaaggataaggctttcactgaagac 475 Query: 464 agctggtcagacgaggatctgtgcagaaagggtgaggattggtatt 509 || |||||||| ||||| | ||||||||| | |||||||||||| Sbjct: 476 agttggtcagatgaggaattatgcagaaagaatcaggattggtatt 521
>gb|AY103770.1| Zea mays PCO100327 mRNA sequence Length = 1333 Score = 222 bits (112), Expect = 9e-55 Identities = 310/376 (82%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||||||||||| || ||||||||||| || ||| || ||||||||||||||| Sbjct: 144 gtgtgcgtgaccggcgctggcggcttcgtcgcgtcggagctggtgaagctcctcctctcc 203 Query: 104 aaggcccactacactgtccgcggcaccgtgcgcgatcccggtaatgctaagaatgctcat 163 || ||| ||| | |||||||||||||||||||| || ||| | |||||||| ||| Sbjct: 204 cggggccaatacgcggtccgcggcaccgtgcgcgaccctggtgctagcaagaatgcccat 263 Query: 164 ctcaaggcgctagaaggtgctggggaaaggctgcagctgctcagcgctgacctgctggac 223 ||||||| ||| ||||| |||| ||||||| ||||||| |||| ||||| ||| ||||| Sbjct: 264 ctcaaggtgctggaaggagctgaggaaaggttgcagcttctcaaggctgatctgatggac 323 Query: 224 tacgacagcattgcgtcggcggttgctggctgtgagggcgtcttccatgttgctagccct 283 |||||||||||||| || || ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 324 tacgacagcattgcatcagcagttgccggctgtgagggtgtcttccatgtagctagccct 383 Query: 284 gtcccttctggtagatcgaccaaccctgaggaagaagttatagcccctgctgtaacaggc 343 |||| ||| | || | |||||||||||| || || ||||| || ||||||| ||| Sbjct: 384 gtcctttcccatcgaccctccaaccctgaggtggaggtcatagctcccgctgtaataggt 443 Query: 344 acactgaatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtct 403 ||| |||||||| ||||||||| | ||||||||||||| ||||||||| | |||||| Sbjct: 444 acaaccaatgtgttaaaggcttgctatgaggcaaaagttaggcgagttgtggtggtgtct 503 Query: 404 tcatgtgctgctgtgt 419 ||||||| ||||||| Sbjct: 504 tcatgtggagctgtgt 519
>gb|BT018028.1| Zea mays clone EL01N0529H05.c mRNA sequence Length = 1336 Score = 210 bits (106), Expect = 3e-51 Identities = 307/374 (82%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||||||||||| || |||||| |||| ||||| || || ||||||||||||| | Sbjct: 69 gtgtgcgtgaccggcgcgggcggcttcatcgcgtcatgtctggtgaagctcctcctctgc 128 Query: 104 aaggcccactacactgtccgcggcaccgtgcgcgatcccggtaatgctaagaatgctcat 163 || ||| |||| |||||||||||||||||||| || ||| | |||||||||||| Sbjct: 129 cggggccaatacaaggtccgcggcaccgtgcgcgaccctggtgctagcaagaatgctcat 188 Query: 164 ctcaaggcgctagaaggtgctggggaaaggctgcagctgctcagcgctgacctgctggac 223 ||||||| ||| ||||| |||||||||||| ||||||| ||| ||||| || ||||| Sbjct: 189 ctcaaggtgctggaaggggctggggaaaggttgcagcttgtcaaggctgatttgttggac 248 Query: 224 tacgacagcattgcgtcggcggttgctggctgtgagggcgtcttccatgttgctagccct 283 ||| ||| |||| || || |||| ||||||||||| ||||||||||| ||||||||| Sbjct: 249 tacagcagtgttgcatcagcaattgccggctgtgagggtgtcttccatgtagctagccct 308 Query: 284 gtcccttctggtagatcgaccaaccctgaggaagaagttatagcccctgctgtaacaggc 343 |||||||| ||| | || |||||||||||| || || |||| |||||||||||||| Sbjct: 309 gtcccttccggtcggtcctccaaccctgaggtggaggtcataggtcctgctgtaacaggt 368 Query: 344 acactgaatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtct 403 ||| | |||||||| ||||||||| | |||||||||||| ||||||||| | || ||| Sbjct: 369 acaatcaatgtgttaaaggcttgctatgaggcaaaagttgggcgagttgtggtggtctct 428 Query: 404 tcatgtgctgctgt 417 |||||||| ||||| Sbjct: 429 tcatgtgcagctgt 442
>gb|AY107063.1| Zea mays PCO100324 mRNA sequence Length = 999 Score = 165 bits (83), Expect = 2e-37 Identities = 368/463 (79%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctccaag 106 |||||||||||||| ||||||||| |||| || |||||||| ||||||||||||||| Sbjct: 205 tgcgtgaccggcgcgggaggcttcatcgcgtcttggctcgtgaagctcctcctctcccgt 264 Query: 107 gcccactacactgtccgcggcaccgtgcgcgatcccggtaatgctaagaatgctcatctc 166 | || ||| |||||||||||||||||||| || ||| | ||||||||||||||| Sbjct: 265 ggtcagtacgtggtccgcggcaccgtgcgcgaccctggtgctagcaagaatgctcatctc 324 Query: 167 aaggcgctagaaggtgctggggaaaggctgcagctgctcagcgctgacctgctggactac 226 |||| | | || | |||||||||||| ||||||| ||| ||||| || |||||||| Sbjct: 325 aaggagttggagcgggctggggaaaggttgcagcttctccaggctgatttgttggactac 384 Query: 227 gacagcattgcgtcggcggttgctggctgtgagggcgtcttccatgttgctagccctgtc 286 ||| |||| || || |||||||||||||||| ||||||||||| ||| |||||||| Sbjct: 385 agcagtgttgcatcagcaattgctggctgtgagggtgtcttccatgtagcttgccctgtc 444 Query: 287 ccttctggtagatcgaccaaccctgaggaagaagttatagcccctgctgtaacaggcaca 346 ||||||||| | || ||||||| ||| || || |||| ||||||||| ||| ||| Sbjct: 445 ccttctggtcggtcctccaaccccaaggtggaggtcataggtcctgctgtagtaggaaca 504 Query: 347 ctgaatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtcatagtgtcttca 406 |||||||| ||||||||| | ||||||||||||||||||||||| | |||||||| Sbjct: 505 accaatgtgttaaaggcttgctatgaggcaaaagttaagcgagttgtggtggtgtcttct 564 Query: 407 tgtgctgctgtgttcaacaatcctaactggcccaagggcaaagtatttactgaagacagc 466 | | ||||| |||| || ||||| ||||| |||| ||| || ||| ||||||| Sbjct: 565 gtttcagctgtattcagtaaccctaattggcctaaggacaaggtctttgatgaagactct 624 Query: 467 tggtcagacgaggatctgtgcagaaagggtgaggattggtatt 509 ||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 625 tggtcagacgaggattattgcaggaagaatgaggattggtatt 667
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 323 atagcccctgctgtaacaggcacactgaatgtgttgaaggcttgcaacgaggcaaaagtt 382 ||||| |||||||||||||||||||| |||||||||||||| ||| | |||||||||||| Sbjct: 24691679 atagctcctgctgtaacaggcacacttaatgtgttgaaggcctgccatgaggcaaaagtt 24691620 Query: 383 aagcgagttgtcatagtgtcttcatgtgctgctgtgttcaacaatcctaactggcccaag 442 |||||||||||||| |||||||| |||||| ||||||| |||||||||||||| ||| Sbjct: 24691619 aagcgagttgtcatggtgtcttccattgctgccgtgttcagtaatcctaactggccaaag 24691560 Query: 443 ggcaaagtatttactgaagacagctggtcagacgaggatctgtgcagaaag 493 | || | || ||||||||||| |||||||| ||||| | ||||||||| Sbjct: 24691559 gataaggctttcactgaagacagttggtcagatgaggaattatgcagaaag 24691509 Score = 119 bits (60), Expect = 9e-24 Identities = 141/168 (83%) Strand = Plus / Minus Query: 147 atgctaagaatgctcatctcaaggcgctagaaggtgctggggaaaggctgcagctgctca 206 |||| ||||||| |||||||| ||||||| ||||||| | ||| ||| |||||||||||| Sbjct: 24692171 atgccaagaatgatcatctcagggcgctacaaggtgccgaggagaggttgcagctgctca 24692112 Query: 207 gcgctgacctgctggactacgacagcattgcgtcggcggttgctggctgtgagggcgtct 266 ||||| ||| ||||||| ||||| | || || |||||||| |||||||||||||||| Sbjct: 24692111 aggctgatctgttggactatgacagtgtagcttcagcggttgccggctgtgagggcgtct 24692052 Query: 267 tccatgttgctagccctgtcccttctggtagatcgaccaaccctgagg 314 ||||||| || |||||||| || || || |||| ||||||||||||| Sbjct: 24692051 tccatgtcgccagccctgtaccctcgggccgatccaccaaccctgagg 24692004 Score = 79.8 bits (40), Expect = 8e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||||||||||| || |||||||| || || |||||||||||||||||||||||| Sbjct: 24706381 gtgtgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctcc 24706322 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || |||||||||||||| ||||||||| | | |||||||||| Sbjct: 24687296 gtgtgcgtcaccggcgccggcggcttcgtcgcctcgtggctcgtccatcgcctcctctcc 24687237 Score = 44.1 bits (22), Expect = 0.44 Identities = 79/98 (80%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| | ||||| | || |||| |||| ||||||||| Sbjct: 24692747 gtgtgcgtcaccggcgccggggggttcatggcctcgtcgcacgtcgagctgctcctctcc 24692688 Query: 104 aaggcccactacactgtccgcggcaccgtgcgcgatcc 141 || ||||| | ||||||||||||||||| ||||| Sbjct: 24692687 cgggggaactacgcggtccgcggcaccgtgcgggatcc 24692650
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 323 atagcccctgctgtaacaggcacactgaatgtgttgaaggcttgcaacgaggcaaaagtt 382 ||||| |||||||||||||||||||| |||||||||||||| ||| | |||||||||||| Sbjct: 25360 atagctcctgctgtaacaggcacacttaatgtgttgaaggcctgccatgaggcaaaagtt 25301 Query: 383 aagcgagttgtcatagtgtcttcatgtgctgctgtgttcaacaatcctaactggcccaag 442 |||||||||||||| |||||||| |||||| ||||||| |||||||||||||| ||| Sbjct: 25300 aagcgagttgtcatggtgtcttccattgctgccgtgttcagtaatcctaactggccaaag 25241 Query: 443 ggcaaagtatttactgaagacagctggtcagacgaggatctgtgcagaaag 493 | || | || ||||||||||| |||||||| ||||| | ||||||||| Sbjct: 25240 gataaggctttcactgaagacagttggtcagatgaggaattatgcagaaag 25190 Score = 119 bits (60), Expect = 9e-24 Identities = 141/168 (83%) Strand = Plus / Minus Query: 147 atgctaagaatgctcatctcaaggcgctagaaggtgctggggaaaggctgcagctgctca 206 |||| ||||||| |||||||| ||||||| ||||||| | ||| ||| |||||||||||| Sbjct: 25852 atgccaagaatgatcatctcagggcgctacaaggtgccgaggagaggttgcagctgctca 25793 Query: 207 gcgctgacctgctggactacgacagcattgcgtcggcggttgctggctgtgagggcgtct 266 ||||| ||| ||||||| ||||| | || || |||||||| |||||||||||||||| Sbjct: 25792 aggctgatctgttggactatgacagtgtagcttcagcggttgccggctgtgagggcgtct 25733 Query: 267 tccatgttgctagccctgtcccttctggtagatcgaccaaccctgagg 314 ||||||| || |||||||| || || || |||| ||||||||||||| Sbjct: 25732 tccatgtcgccagccctgtaccctcgggccgatccaccaaccctgagg 25685 Score = 79.8 bits (40), Expect = 8e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||||||||||| || |||||||| || || |||||||||||||||||||||||| Sbjct: 40062 gtgtgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctcc 40003 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || |||||||||||||| ||||||||| | | |||||||||| Sbjct: 20977 gtgtgcgtcaccggcgccggcggcttcgtcgcctcgtggctcgtccatcgcctcctctcc 20918 Score = 44.1 bits (22), Expect = 0.44 Identities = 79/98 (80%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| | ||||| | || |||| |||| ||||||||| Sbjct: 26428 gtgtgcgtcaccggcgccggggggttcatggcctcgtcgcacgtcgagctgctcctctcc 26369 Query: 104 aaggcccactacactgtccgcggcaccgtgcgcgatcc 141 || ||||| | ||||||||||||||||| ||||| Sbjct: 26368 cgggggaactacgcggtccgcggcaccgtgcgggatcc 26331
>ref|XM_480400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||||||| ||||| |||||||||||||||||| Sbjct: 34 gtgtgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctctcc 93 Query: 104 aaggcccactac 115 |||| ||||||| Sbjct: 94 aaggaccactac 105 Score = 69.9 bits (35), Expect = 8e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 216 tgctggactacgacagcattgcgtcggcggttgctggctgtgagggcgtcttccatgttg 275 |||| ||||||| |||| | ||| ||||| | || ||||| || |||||||||||||| | Sbjct: 230 tgctcgactacggcagcgtcgcggcggcgatcgccggctgcgacggcgtcttccatgtcg 289 Query: 276 ctagccctgtcccttctggtagatcgaccaaccctgaggaagaagttatagcccctgctg 335 | ||||||||| | || || || | ||||| ||||||| ||| | || || | |||| Sbjct: 290 ccagccctgtcacctccggccgacccaccaatcctgaggtagatatcatcgctacggctg 349 Query: 336 taacaggcacactgaatgtgttgaaggcttgcaacgaggcaaaagttaagcgagttgtca 395 |||| || |||||||||||||||| ||| || |||| |||||||| ||||||||||| Sbjct: 350 taactgggacactgaatgtgttgagagctagccacgaagcaaaagtgaagcgagttgtgg 409 Query: 396 tagtgtcttcatgtgctgctgtgttcaacaatcctaactggcc 438 | || |||||| || || |||||||| ||||| |||||||| Sbjct: 410 tggtttcttcagttgtcgcagtgttcaataatcccaactggcc 452
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||||||| ||||| |||||||||||||||||| Sbjct: 4893882 gtgtgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctctcc 4893823 Query: 104 aaggcccactac 115 |||| ||||||| Sbjct: 4893822 aaggaccactac 4893811 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 332 gctgtaacaggcacactgaatgtgttgaaggcttgcaacgaggcaaaagttaagcgagtt 391 |||||||| || |||||||||||||||| ||| || |||| |||||||| ||||||||| Sbjct: 4893253 gctgtaactgggacactgaatgtgttgagagctagccacgaagcaaaagtgaagcgagtt 4893194 Query: 392 gtcatagtgtcttcatgtgctgctgtgttcaacaatcctaactggcc 438 || | || |||||| || || |||||||| ||||| |||||||| Sbjct: 4893193 gtggtggtttcttcagttgtcgcagtgttcaataatcccaactggcc 4893147 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctc 100 ||||| |||||||| || || ||| |||| || ||||||||||||||||||||| Sbjct: 10712452 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 10712505 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 216 tgctggactacgacagcattgcgtcggcggttgctggctgtgagggcgtcttccatgttg 275 |||| ||||||| |||| | ||| ||||| | || ||||| || |||||||||||||| | Sbjct: 4893594 tgctcgactacggcagcgtcgcggcggcgatcgccggctgcgacggcgtcttccatgtcg 4893535 Query: 276 ctagccctgtc 286 | ||||||||| Sbjct: 4893534 ccagccctgtc 4893524
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||||||| ||||| |||||||||||||||||| Sbjct: 53136 gtgtgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctctcc 53077 Query: 104 aaggcccactac 115 |||| ||||||| Sbjct: 53076 aaggaccactac 53065 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 332 gctgtaacaggcacactgaatgtgttgaaggcttgcaacgaggcaaaagttaagcgagtt 391 |||||||| || |||||||||||||||| ||| || |||| |||||||| ||||||||| Sbjct: 52507 gctgtaactgggacactgaatgtgttgagagctagccacgaagcaaaagtgaagcgagtt 52448 Query: 392 gtcatagtgtcttcatgtgctgctgtgttcaacaatcctaactggcc 438 || | || |||||| || || |||||||| ||||| |||||||| Sbjct: 52447 gtggtggtttcttcagttgtcgcagtgttcaataatcccaactggcc 52401 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 216 tgctggactacgacagcattgcgtcggcggttgctggctgtgagggcgtcttccatgttg 275 |||| ||||||| |||| | ||| ||||| | || ||||| || |||||||||||||| | Sbjct: 52848 tgctcgactacggcagcgtcgcggcggcgatcgccggctgcgacggcgtcttccatgtcg 52789 Query: 276 ctagccctgtc 286 | ||||||||| Sbjct: 52788 ccagccctgtc 52778
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||||||| ||||| |||||||||||||||||| Sbjct: 98676 gtgtgcgtcaccggcgccggcggattcctcgcctcgtggctggtcaagctcctcctctcc 98617 Query: 104 aaggcccactac 115 |||| ||||||| Sbjct: 98616 aaggaccactac 98605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 332 gctgtaacaggcacactgaatgtgttgaaggcttgcaacgaggcaaaagttaagcgagtt 391 |||||||| || |||||||||||||||| ||| || |||| |||||||| ||||||||| Sbjct: 98047 gctgtaactgggacactgaatgtgttgagagctagccacgaagcaaaagtgaagcgagtt 97988 Query: 392 gtcatagtgtcttcatgtgctgctgtgttcaacaatcctaactggcc 438 || | || |||||| || || |||||||| ||||| |||||||| Sbjct: 97987 gtggtggtttcttcagttgtcgcagtgttcaataatcccaactggcc 97941 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 216 tgctggactacgacagcattgcgtcggcggttgctggctgtgagggcgtcttccatgttg 275 |||| ||||||| |||| | ||| ||||| | || ||||| || |||||||||||||| | Sbjct: 98388 tgctcgactacggcagcgtcgcggcggcgatcgccggctgcgacggcgtcttccatgtcg 98329 Query: 276 ctagccctgtc 286 | ||||||||| Sbjct: 98328 ccagccctgtc 98318
>dbj|AK073641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052J24, full insert sequence Length = 1232 Score = 79.8 bits (40), Expect = 8e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||||||||||| || |||||||| || || |||||||||||||||||||||||| Sbjct: 55 gtgtgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctcc 114
>dbj|AK063958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G03, full insert sequence Length = 1737 Score = 79.8 bits (40), Expect = 8e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||||||||||| || |||||||| || || |||||||||||||||||||||||| Sbjct: 502 gtgtgcgtgaccggcgccgggggcttcgtggcgtcgtggctcgtcaagctcctcctctcc 561
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 39 gcgttgtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcc 98 |||| |||||||| |||||||| || || ||||||| ||| ||||||||| ||||||||| Sbjct: 16250 gcgtcgtgtgcgtcaccggcgccggcgggttcgtcggctcgtggctcgtcgagctcctcc 16309 Query: 99 tctcc 103 ||||| Sbjct: 16310 tctcc 16314 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||||||||||| || || ||| || ||| |||||||||||||||||||||||| Sbjct: 42147 gtgtgcgtgaccggcgccggcgggttcaccggctcgtggctcgtcaagctcctcctctcc 42206 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||| ||| |||||||||||||||||||||||| Sbjct: 35497 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcc 35556 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||| ||| |||||||||||||||||||||||| Sbjct: 26410 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcc 26469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||| ||| ||||||||||| |||||||||||| Sbjct: 21825 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaatctcctcctctcc 21884 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 72 tcgcctcatggctcgtcaagctcctcctctcc 103 ||||||| |||||||||||||| ||||||||| Sbjct: 6438 tcgcctcctggctcgtcaagctgctcctctcc 6469
>dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E03, full insert sequence Length = 1272 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 39 gcgttgtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcc 98 |||| |||||||| |||||||| || || ||||||| ||| ||||||||| ||||||||| Sbjct: 100 gcgtcgtgtgcgtcaccggcgccggcgggttcgtcggctcgtggctcgtcgagctcctcc 159 Query: 99 tctcc 103 ||||| Sbjct: 160 tctcc 164
>gb|AY771357.1| Triticum aestivum cultivar H4564 cinnamoyl-CoA reductase mRNA, complete cds Length = 1489 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcct 99 |||||||| |||||||| || |||||| ||||||| ||||||||||||| |||||| Sbjct: 215 gtgtgcgtcaccggcgccggcggcttcatcgcctcgtggctcgtcaagcgcctcct 270
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || |||||||||||||| ||||||||| | | |||||||||| Sbjct: 170489 gtgtgcgtcaccggcgccggcggcttcgtcgcctcgtggctcgtccatcgcctcctctcc 170430
>dbj|AK107469.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B02, full insert sequence Length = 1507 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || |||||||||||||| ||||||||| | | |||||||||| Sbjct: 81 gtgtgcgtcaccggcgccggcggcttcgtcgcctcgtggctcgtccatcgcctcctctcc 140
>dbj|AK073442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G18, full insert sequence Length = 1342 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||||||||||| || || ||| || ||| |||||||||||||||||||||||| Sbjct: 91 gtgtgcgtgaccggcgccggcgggttcaccggctcgtggctcgtcaagctcctcctctcc 150
>dbj|AK068648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159B10, full insert sequence Length = 1452 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||| ||| |||||||||||||||||||||||| Sbjct: 131 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcc 190
>dbj|AK062138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F11, full insert sequence Length = 1270 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 |||||||| |||||||| || || ||| ||| ||| |||||||||||||||||||||||| Sbjct: 130 gtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcc 189
>gb|AY108351.1| Zea mays PCO122024 mRNA sequence Length = 1233 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 46 gtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctctcc 103 ||||||||| ||||| || || | | ||||||| |||||||||||||||||||||||| Sbjct: 139 gtgcgtgacgggcgccggcgggtacatcgcctcgtggctcgtcaagctcctcctctcc 196
>ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1420 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctc 100 ||||| |||||||| || || ||| |||| || ||||||||||||||||||||| Sbjct: 214 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 267
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctc 100 ||||| |||||||| || || ||| |||| || ||||||||||||||||||||| Sbjct: 9584 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 9637
>dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D08, full insert sequence Length = 1420 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctc 100 ||||| |||||||| || || ||| |||| || ||||||||||||||||||||| Sbjct: 214 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 267
>gb|AY111471.1| Zea mays CL42025_1 mRNA sequence Length = 830 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 413 gctgtgttcaacaatcctaactggcccaagggcaaagtatttactgaagacagctggtca 472 ||||||||||| |||||| ||||||| |||||| | | |||||||| || ||||||||| Sbjct: 779 gctgtgttcaataatcctgactggcctaagggcgaggcctttactgaggatagctggtca 720 Query: 473 ga 474 || Sbjct: 719 ga 718
>ref|XM_450149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctc 100 |||||||| |||||||| || || ||| |||| || ||||||||||||| ||||||| Sbjct: 273 gtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 329
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctc 100 |||||||| |||||||| || || ||| |||| || ||||||||||||| ||||||| Sbjct: 2033013 gtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 2032957 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 64 aggcttcgtcgcctcatggctcgtcaag 91 ||||||||||||||| |||||| ||||| Sbjct: 18825243 aggcttcgtcgcctcttggctcatcaag 18825216
>gb|AY227672.1| Zea mays genotype Mo17 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2937 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcct 99 ||||||||||| || ||||| ||| | ||||| ||||||||||||| |||||| Sbjct: 1216 tgcgtgaccggagctggagggttcattgcctcctggctcgtcaagcgcctcct 1268
>gb|AY227671.1| Zea mays genotype F288 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2942 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcct 99 ||||||||||| || ||||| ||| | ||||| ||||||||||||| |||||| Sbjct: 1222 tgcgtgaccggagctggagggttcattgcctcctggctcgtcaagcgcctcct 1274
>gb|AY227670.1| Zea mays genotype MBS847 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2937 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcct 99 ||||||||||| || ||||| ||| | ||||| ||||||||||||| |||||| Sbjct: 1216 tgcgtgaccggagctggagggttcattgcctcctggctcgtcaagcgcctcct 1268
>gb|AY227669.1| Zea mays genotype F271 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2937 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcct 99 ||||||||||| || ||||| ||| | ||||| ||||||||||||| |||||| Sbjct: 1216 tgcgtgaccggagctggagggttcattgcctcctggctcgtcaagcgcctcct 1268
>gb|AY227668.1| Zea mays genotype F7025 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2937 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcct 99 ||||||||||| || ||||| ||| | ||||| ||||||||||||| |||||| Sbjct: 1177 tgcgtgaccggagctggagggttcattgcctcctggctcgtcaagcgcctcct 1229
>gb|AY227029.1| Zea mays genotype B73 cinnamoyl-CoA reductase (ccr2) gene, promoter region, exons 1 through 5, and complete cds Length = 2966 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcct 99 ||||||||||| || ||||| ||| | ||||| ||||||||||||| |||||| Sbjct: 1206 tgcgtgaccggagctggagggttcattgcctcctggctcgtcaagcgcctcct 1258
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctc 100 |||||||| |||||||| || || ||| |||| || ||||||||||||| ||||||| Sbjct: 68380 gtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 68324
>emb|Y15069.1|ZMCCR2 Zea mays mRNA for cinnamoyl-CoA reductase Length = 1468 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 47 tgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcct 99 ||||||||||| || ||||| ||| | ||||| ||||||||||||| |||||| Sbjct: 183 tgcgtgaccggagctggagggttcattgcctcctggctcgtcaagcgcctcct 235
>dbj|AK100234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051O20, full insert sequence Length = 1612 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggctcgtcaagctcctcctc 100 |||||||| |||||||| || || ||| |||| || ||||||||||||| ||||||| Sbjct: 273 gtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 329
>emb|X88797.1|EGRNACAD1 E.gunnii mRNA for cinnamyl alcohol dehydrogenase Length = 1225 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 72 tcgcctcatggctcgtcaagctcctcct 99 ||||||| |||||||||||||||||||| Sbjct: 128 tcgcctcgtggctcgtcaagctcctcct 155
>gb|AC096920.2| Homo sapiens chromosome 3 clone RP11-804H8, complete sequence Length = 192324 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 agaaggtgctggggaaaggctg 196 |||||||||||||||||||||| Sbjct: 73720 agaaggtgctggggaaaggctg 73741
>emb|Z74618.1|HSLUCA1 Human DNA sequence from clone XXcos-1 on chromosome 3, complete sequence Length = 30377 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 agaaggtgctggggaaaggctg 196 |||||||||||||||||||||| Sbjct: 1483 agaaggtgctggggaaaggctg 1504
>ref|NM_121949.2| Arabidopsis thaliana alcohol dehydrogenase AT5G19440 mRNA, complete cds Length = 1273 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 tcgcctcatggctcgtcaagctcct 96 |||||||||||||||||||| |||| Sbjct: 129 tcgcctcatggctcgtcaagttcct 153
>ref|NM_187716.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 981 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggct 84 ||||||||||||||||| || |||||| ||| |||||||| Sbjct: 25 gtgtgcgtgaccggcgccggtggcttcatcgggtcatggct 65
>gb|AF101045.1| Oryza sativa (japonica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative transcription factor X1, putative transcription factor X2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 29877 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 27191 ggcttcgtcggctcatggctcgtca 27215
>gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 30034 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 26955 ggcttcgtcggctcatggctcgtca 26979
>ref|XM_781914.1| PREDICTED: Strongylocentrotus purpuratus similar to Exportin-7 (Ran-binding protein 16) (LOC581937), mRNA Length = 3183 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 tcgtcaagctcctcctctcca 104 ||||||||||||||||||||| Sbjct: 2594 tcgtcaagctcctcctctcca 2614
>gb|BT024722.1| Arabidopsis thaliana At5g19440 mRNA, complete cds Length = 981 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 tcgcctcatggctcgtcaagctcct 96 |||||||||||||||||||| |||| Sbjct: 56 tcgcctcatggctcgtcaagttcct 80
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 gagggagacggggaatggaggcggc 27 ||||||||||||||| ||||||||| Sbjct: 14569010 gagggagacggggaaaggaggcggc 14569034
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 25378974 ggcttcgtcggctcatggctcgtca 25378998 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggct 84 ||||||||||||||||| || |||||| ||| |||||||| Sbjct: 10142474 gtgtgcgtgaccggcgccggtggcttcatcgggtcatggct 10142514
>emb|BX833200.1|CNS09YNN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1140 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 tcgcctcatggctcgtcaagctcct 96 |||||||||||||||||||| |||| Sbjct: 97 tcgcctcatggctcgtcaagttcct 121
>gb|AY088448.1| Arabidopsis thaliana clone 6748 mRNA, complete sequence Length = 1205 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 tcgcctcatggctcgtcaagctcct 96 |||||||||||||||||||| |||| Sbjct: 122 tcgcctcatggctcgtcaagttcct 146
>gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24 Length = 103024 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 tcgcctcatggctcgtcaagctcct 96 |||||||||||||||||||| |||| Sbjct: 83664 tcgcctcatggctcgtcaagttcct 83688
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggct 84 ||||||||||||||||| || |||||| ||| |||||||| Sbjct: 89943 gtgtgcgtgaccggcgccggtggcttcatcgggtcatggct 89983
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggct 84 ||||||||||||||||| || |||||| ||| |||||||| Sbjct: 7788 gtgtgcgtgaccggcgccggtggcttcatcgggtcatggct 7828
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 68974 ggcttcgtcggctcatggctcgtca 68998
>emb|Y07956.1|OSDIHYFLA O.sativa mRNA for dihydroflavonol reductase Length = 1438 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 166 ggcttcgtcggctcatggctcgtca 190
>dbj|AB003495.1| Oryza sativa (japonica cultivar-group) DNA for dihydroflavonol 4-reductase, complete cds Length = 3613 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 928 ggcttcgtcggctcatggctcgtca 952
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 gagggagacggggaatggaggcggc 27 ||||||||||||||| ||||||||| Sbjct: 14523294 gagggagacggggaaaggaggcggc 14523318
>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158261 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 gagggagacggggaatggaggcggc 27 ||||||||||||||| ||||||||| Sbjct: 92283 gagggagacggggaaaggaggcggc 92259
>gb|U87451.1|OSU87451 Oryza sativa NADPH-dependent reductase A1 gene, partial cds Length = 461 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 22 ggcttcgtcggctcatggctcgtca 46
>dbj|AB010744.1| Oryza sativa (japonica cultivar-group) gene for dihydroflavonol 4-reductase, exon 1, 2, partial sequence Length = 360 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 88 ggcttcgtcggctcatggctcgtca 112
>dbj|AB003496.1| Oryza sativa (japonica cultivar-group) mRNA for dihydroflavonol 4-reductase, complete cds Length = 1480 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 150 ggcttcgtcggctcatggctcgtca 174
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 44 gtgtgcgtgaccggcgcaggaggcttcgtcgcctcatggct 84 ||||||||||||||||| || |||||| ||| |||||||| Sbjct: 67073 gtgtgcgtgaccggcgccggtggcttcatcgggtcatggct 67113
>dbj|AB010745.1| Oryza sativa (japonica cultivar-group) gene for dihydroflavonol 4-reductase, exon 1, 2, partial sequence Length = 360 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ggcttcgtcgcctcatggctcgtca 89 |||||||||| |||||||||||||| Sbjct: 88 ggcttcgtcggctcatggctcgtca 112
>gb|AY742323.1| Chlamydomonas reinhardtii chloroplast triosephosphate isomerase (TIM) mRNA, complete cds; nuclear gene for chloroplast product Length = 1035 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cagctgctcagcgctgacct 216 |||||||||||||||||||| Sbjct: 396 cagctgctcagcgctgacct 377
>gb|AF134807.3| Oryza sativa putative dihydroflavonol reductase mRNA, complete cds Length = 1185 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 aggcttcgtcgcctcatggctcgtcaag 91 ||||||||||||||| |||||| ||||| Sbjct: 50 aggcttcgtcgcctcttggctcatcaag 77
>gb|AC010976.6| Homo sapiens BAC clone RP11-286H15 from 2, complete sequence Length = 204142 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cctcctctccaaggcccact 113 |||||||||||||||||||| Sbjct: 135156 cctcctctccaaggcccact 135175
>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence Length = 249008 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 aagggtgaggattggtattt 510 |||||||||||||||||||| Sbjct: 185876 aagggtgaggattggtattt 185895
>ref|NM_001007895.1| Xenopus tropicalis grhpr protein (grhpr), mRNA Length = 1306 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcatgtgctgctgtgttc 421 |||||||||||||||||||| Sbjct: 68 cttcatgtgctgctgtgttc 49
>gb|BC080331.1| Xenopus tropicalis grhpr protein, mRNA (cDNA clone MGC:79548 IMAGE:6978272), complete cds Length = 1306 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcatgtgctgctgtgttc 421 |||||||||||||||||||| Sbjct: 68 cttcatgtgctgctgtgttc 49
>emb|AL596247.22| Human DNA sequence from clone RP11-417O11 on chromosome 10 Contains the 5' end of the CAMK2G gene for calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma, the PLAU gene for plasminogen activator urokinase, three novel genes (FLJ35198), the 5' end of the VCL gene for vinculin and three CpG islands, complete sequence Length = 228098 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 tgctggggaaaggctgcagctgct 204 |||||||||||||||| ||||||| Sbjct: 14982 tgctggggaaaggctggagctgct 14959
>ref|XM_500551.1| Yarrowia lipolytica CLIB122, YALI0B05940g predicted mRNA Length = 9963 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcaagctcctcctctccaag 106 |||||||||||||||||||| Sbjct: 5915 tcaagctcctcctctccaag 5896
>emb|AL389885.12| Human DNA sequence from clone RP11-391J2 on chromosome 10 Contains a histone deacetylase 1 (HD1, RPD3, RPD3L1) (HDAC1) pseudogene, part of the PLCE1 gene for phospholipase C, epsilon 1 (PLCE, KIAA1516) and a novel gene, complete sequence Length = 101767 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctctccaaggcccac 112 |||||||||||||||||||| Sbjct: 32847 tcctcctctccaaggcccac 32828
>emb|AL133377.10| Human DNA sequence from clone RP1-295F6 on chromosome 6 Contains the 3' end of the TEX27 gene for testis expressed sequence 27 (FLJ13222) and a novel gene, complete sequence Length = 69663 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ctgacctgctggactacgacagca 233 ||||||||||| |||||||||||| Sbjct: 53927 ctgacctgctgaactacgacagca 53904
>dbj|AB110186.1| Oryza sativa (japonica cultivar-group) mRNA for dihydroflavonol reductase, complete cds, clone: 14FPG037 Length = 1194 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 aggcttcgtcgcctcatggctcgtcaag 91 ||||||||||||||| |||||| ||||| Sbjct: 59 aggcttcgtcgcctcttggctcatcaag 86
>dbj|AK128858.1| Homo sapiens cDNA FLJ46664 fis, clone TRACH3007274 Length = 4596 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ctgacctgctggactacgacagca 233 ||||||||||| |||||||||||| Sbjct: 3574 ctgacctgctgaactacgacagca 3551
>dbj|AK091649.1| Homo sapiens cDNA FLJ34330 fis, clone FEBRA2009120 Length = 2673 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ctgacctgctggactacgacagca 233 ||||||||||| |||||||||||| Sbjct: 1820 ctgacctgctgaactacgacagca 1797
>gb|AY064169.1| Pinus taeda cinnamoyl-CoA reductase mRNA, complete cds Length = 1359 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 152 aagaatgctcatctcaaggcgctagaaggtgc 183 |||||||||||||||||| ||| |||||||| Sbjct: 384 aagaatgctcatctcaagcagctggaaggtgc 415
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 aggcttgcaacgaggcaaaa 379 |||||||||||||||||||| Sbjct: 6219595 aggcttgcaacgaggcaaaa 6219576 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aggcttgcaacgaggcaaaa 379 |||||||||||||||||||| Sbjct: 4931132 aggcttgcaacgaggcaaaa 4931151 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aggcttgcaacgaggcaaaa 379 |||||||||||||||||||| Sbjct: 3892006 aggcttgcaacgaggcaaaa 3892025 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aggcttgcaacgaggcaaaa 379 |||||||||||||||||||| Sbjct: 2169730 aggcttgcaacgaggcaaaa 2169749 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aggcttgcaacgaggcaaaa 379 |||||||||||||||||||| Sbjct: 1973865 aggcttgcaacgaggcaaaa 1973884 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 aggcttgcaacgaggcaaaa 379 |||||||||||||||||||| Sbjct: 1550875 aggcttgcaacgaggcaaaa 1550856 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aggcttgcaacgaggcaaaa 379 |||||||||||||||||||| Sbjct: 600768 aggcttgcaacgaggcaaaa 600787
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ctcgtcaagctcctcctctccaag 106 ||||||| |||||||||||||||| Sbjct: 1397349 ctcgtcatgctcctcctctccaag 1397326
>dbj|AK099770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D01, full insert sequence Length = 2836 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 aggcttcgtcgcctcatggctcgtcaag 91 ||||||||||||||| |||||| ||||| Sbjct: 1677 aggcttcgtcgcctcttggctcatcaag 1704
>emb|CR760190.2| Xenopus tropicalis finished cDNA, clone TNeu118d21 Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcatgtgctgctgtgttc 421 |||||||||||||||||||| Sbjct: 65 cttcatgtgctgctgtgttc 46
>gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, complete sequence Length = 216370 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cttcatgtgctgctgtgttc 421 |||||||||||||||||||| Sbjct: 22743 cttcatgtgctgctgtgttc 22724
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcaagctcctcctctccaag 106 |||||||||||||||||||| Sbjct: 800576 tcaagctcctcctctccaag 800557 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,078,171 Number of Sequences: 3902068 Number of extensions: 4078171 Number of successful extensions: 77526 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76894 Number of HSP's gapped (non-prelim): 624 length of query: 514 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 491 effective length of database: 17,143,297,704 effective search space: 8417359172664 effective search space used: 8417359172664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)