>MNR2_YEAST (P35724) Manganese resistance protein MNR2|
          Length = 969

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 421 EHYEFAIYEVQVDKPVHLPTFNGRVHSGQ 507
           EH+ F  + V +D  VH PT +G +  GQ
Sbjct: 407 EHFRFTYFRVDLDSTVHSPTISGLLQPGQ 435

>CAPZA_CANGA (Q6FN48) F-actin capping protein alpha subunit|
          Length = 262

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 22/92 (23%), Positives = 37/92 (40%)
 Frame = +1

Query: 73  FTMDHYWHKPSSCLRIDPRLLPIRELARDAVLLAAKSVILLSSFLENQPLNKCCGLWFQR 252
           F++DH   K           L + E + D      K++  L ++L      +        
Sbjct: 83  FSVDHLHQKG----------LDVEEYSADIDADQKKAITDLGNYLSTNFPGRATFAVLPL 132

Query: 253 DDQRKTALVLTSAHLTRKKDPNQWKGQWTGEY 348
           ++Q KTA+++ S   T+    N W G W  EY
Sbjct: 133 EEQSKTAIIIVS---TKYNPSNFWNGHWKSEY 161

>HUTH_BARQU (Q6FZP9) Histidine ammonia-lyase (EC 4.3.1.3) (Histidase)|
          Length = 512

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +1

Query: 43  KXEEVRLAHLFTMDHYWHKPSSCLRIDPRLLPIRELARDAVLLAAKSVILLSSFLENQPL 222
           K  E+R AHL   DH    P  C+R  P+++       D ++ AAK++I+ ++ + + PL
Sbjct: 261 KDSEIRAAHLCDDDHRVQDP-YCIRCQPQVM---GACFDVLVAAAKTLIIEANAVTDNPL 316

>ATM_YEAST (P38110) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase TEL1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2787

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 181  SVILLSSFLENQPLNKCCGLWFQRDDQRK 267
            + ++ S+  +N  ++K CGLWF+ DD  K
Sbjct: 2234 NTLVFSNRYDNDIIDKFCGLWFENDDNSK 2262

>ATM_CANGA (Q6FRZ9) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase TEL1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2763

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 22/84 (26%), Positives = 40/84 (47%)
 Frame = +1

Query: 37   NTKXEEVRLAHLFTMDHYWHKPSSCLRIDPRLLPIRELARDAVLLAAKSVILLSSFLENQ 216
            N   EE+ +      +   H  +  L I+   L  ++L + A+    + +IL +++ +  
Sbjct: 2155 NLSNEELLVGQKHYHNLKTHMENDRLAIENICLTRKKLIKRALDYYVQILILTNNY-DYD 2213

Query: 217  PLNKCCGLWFQRDDQRKTALVLTS 288
             L++ CGLWF+ DD       LTS
Sbjct: 2214 VLDRFCGLWFENDDDDDINTDLTS 2237

>SHOC2_MOUSE (O88520) Leucine-rich repeat protein SHOC-2 (Ras-binding protein|
           Sur-8)
          Length = 582

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -2

Query: 645 NSLRVDASRRKIHVVASLMPRWNVIGQITMCYLYIQICVSSKAE 514
           NS+R+D S+R IH+   L P    + Q+T  YLY     S  AE
Sbjct: 101 NSMRLDLSKRSIHI---LPPSVKELTQLTELYLYSNKLQSLPAE 141

>SHOC2_HUMAN (Q9UQ13) Leucine-rich repeat protein SHOC-2 (Ras-binding protein|
           Sur-8)
          Length = 582

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 645 NSLRVDASRRKIHVVASLMPRWNVIGQITMCYLYIQICVSSKAE 514
           NS+R+D S+R IH++ S +     + Q+T  YLY     S  AE
Sbjct: 101 NSMRLDLSKRSIHILPSSIKE---LTQLTELYLYSNKLQSLPAE 141

>NU2M_DROMA (P29867) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2) (Fragment)
          Length = 274

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 17/75 (22%)
 Frame = -2

Query: 591 MPRWNVIGQITMC-----------------YLYIQICVSSKAENILTRMNTAIKSG*MNW 463
           +P+W VI Q+T+C                 + Y++IC S+   N              NW
Sbjct: 190 LPKWLVIQQLTLCNQYFLLLLMMMSTLITLFFYLRICYSAFMMNYFEN----------NW 239

Query: 462 FVHLNLINSKFIMLL 418
            + +N+I+S   M L
Sbjct: 240 IMKMNMISSNTNMYL 254

>PRTP_EBV (P25939) Probable processing and transport protein|
          Length = 789

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 103 SSCLRIDPRLLPIRELARDAVLLAAKSVILL 195
           S C R+DPR L +  + R+A LLA    ILL
Sbjct: 124 SVCTRLDPRSLDVAAVVRNAGLLAELEAILL 154

>NU2M_DROYA (P03895) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 341

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = -2

Query: 591 MPRWNVIGQITMCYLYIQICVSSKAENILTRMNTAIKSG*MNWFVHLNLINSKFIMLLKI 412
           +P+W VI Q+TMC  Y  +         L  M+T I       F +L +  S F  +L  
Sbjct: 257 LPKWLVIQQLTMCNQYFLL--------TLMMMSTLI-----TLFFYLRICYSAF--MLNY 301

Query: 411 DELAWCSCIVQQMNN-DLSIMMIFACPLPLPLVGILF 304
            E  W   +    NN +L ++M F     L L+ + F
Sbjct: 302 FENNWIMEMNMNSNNTNLYLIMTFFSIFGLFLISLFF 338

>TILS_XANCP (Q8P7L3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 435

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +1

Query: 127 RLLPIRELARDAVLLAAKSVILLS-SFLENQPLNKCCGLWFQRDDQR-KTALVLTSAHLT 300
           RLL     A  A  L A+ V  L       QP  + C  W Q + +R +  L L SA  T
Sbjct: 259 RLLRAWVAAAHAPPLPAQGVHALEREIATTQPDRQTCFAWQQTEIRRWRQQLYLLSARAT 318

Query: 301 RKKDPNQWKGQWTGE 345
               P QW+ +W G+
Sbjct: 319 W---PAQWQAEWNGD 330

>SYH_WOLPM (P62351) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 408

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 309 LFTSEMSRRQNKGGFSLVIPLKPQATAFIQRLILEK 202
           + T EM    +KGG S  I L+P+ TA I RL++EK
Sbjct: 60  IITKEMYSFNDKGGKS--ITLRPEFTAAIVRLLIEK 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,622,677
Number of Sequences: 219361
Number of extensions: 2143730
Number of successful extensions: 5409
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5409
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)