ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6n23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF542191.1| Triticum aestivum ribosomal protein S8-like mRNA, complete sequence Length = 806 Score = 938 bits (473), Expect = 0.0 Identities = 584/617 (94%), Gaps = 3/617 (0%) Strand = Plus / Plus Query: 1 gacgccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaa 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 72 gacgccaccatgggtatctcgcgtg-actccatgcacaagcgccgggccaccggtgggaa 130 Query: 61 gcagaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaa 120 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 131 gcagaaggcttggaggaagaagcgaaagtatgagctcggccgccagccagccaacactaa 190 Query: 121 gctttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggag 180 |||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 191 gctttcaagcaacaagacagtgaggagggtccgtgttcgcggaggtaacgtgaagtggag 250 Query: 181 ggctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagac 240 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 251 ggctctccgtcttgacactggtaacttctcatggggtagtgaggctgtgacccgcaagac 310 Query: 241 ccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagaccct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 ccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagaccct 370 Query: 301 tgtgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactca 360 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 371 tgtcaagaatgccattgtgcaagttgatgctgcccccttcaagcagtggtacctgactca 430 Query: 361 ttatggagtggaaatcggtaggaagaagaaagctgctgccgctgccaaaaaggatgctgc 420 ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct: 431 ttatggagtcgaaatcggtaggaagaagaaagctgctgcagctgccaagaaggaacctgc 490 Query: 421 tgaggggcaagaggctgaggttgctgctgctgccacagaggaagcaaagaagagcaacaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 tgaggggcaagaggctgaggttgctgctgctgccacagaggaagcaaagaagagcaacaa 550 Query: 481 agtccagaggaagcttgagaagcgtcagcaggggcgcactctggactcacacattgagga 540 ||||||||||||||||||||||| |||||||| || || |||||||| ||||||||||| Sbjct: 551 tgtccagaggaagcttgagaagcgccagcagggacgtacactggactcgcacattgagga 610 Query: 541 gcagttcagcggtggaaggttgctggcttgcatttcg-tctcgccctgggccagtgtggg 599 ||||||||| ||||||||| ||||||| ||||||||| ||||||||| || |||||||| Sbjct: 611 gcagttcagtggtggaaggctgctggcctgcatttcgttctcgccct-ggacagtgtggc 669 Query: 600 agagctgatgggtacat 616 ||||||||||||||||| Sbjct: 670 agagctgatgggtacat 686
>emb|AJ000228.1|HVJ000228 Hordeum vulgare mRNA for expressed sequence tag Length = 444 Score = 751 bits (379), Expect = 0.0 Identities = 386/387 (99%), Gaps = 1/387 (0%) Strand = Plus / Plus Query: 1 gacgccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaa 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 56 gacgccaccatgggtatctcgcgtg-actccatgcacaagcgccgggccaccggtgggaa 114 Query: 61 gcagaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 gcagaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaa 174 Query: 121 gctttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 gctttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggag 234 Query: 181 ggctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 ggctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagac 294 Query: 241 ccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagaccct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 ccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagaccct 354 Query: 301 tgtgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 tgtgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactca 414 Query: 361 ttatggagtggaaatcggtaggaagaa 387 ||||||||||||||||||||||||||| Sbjct: 415 ttatggagtggaaatcggtaggaagaa 441
>dbj|AK068316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C04, full insert sequence Length = 1022 Score = 539 bits (272), Expect = e-150 Identities = 530/614 (86%), Gaps = 14/614 (2%) Strand = Plus / Plus Query: 3 cgccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagc 62 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 92 cgccaccatgggtatctcgcgtg-actccatgcacaagcgccgggccaccggtgggaagc 150 Query: 63 agaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagc 122 |||| || ||||||||||||||||||||||||||||| |||||||| || ||||| ||| Sbjct: 151 agaaagcgtggaggaagaagcgaaagtatgagcttggtcgccagccggcaaacaccaagt 210 Query: 123 tttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggaggg 182 | ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| Sbjct: 211 tgtcgagcaacaagacagtgaggagggtccgtgttcgtggaggaaatctgaagtggaggg 270 Query: 183 ctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagaccc 242 |||| || ||||| |||||||||| || ||||| |||||||| || |||||||||| Sbjct: 271 ctcttcgcctggatactggtaactattcttggggaagtgaggctgtcactcgcaagaccc 330 Query: 243 gtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttg 302 || |||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 331 gtatccttgatgtggtctacaatgcgtcaaacaatgagcttgtgaggacccagacccttg 390 Query: 303 tgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatt 362 |||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||| | Sbjct: 391 tgaagagtgccattgtgcaagttgatgctgccccattcaagcagtggtatctcactcact 450 Query: 363 atggagtggaaatcggtaggaagaagaaagctgctgccgctgccaaaaaggatgctgctg 422 |||| || || ||||||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 451 atggtgtcgatatcggtaggaagaagaaagctcct---gctgctaagaaggatgctgctg 507 Query: 423 aggggcaagaggctgaggttgctgctgctgccacagaggaagcaaagaagagcaacaaag 482 |||| ||||||| |||| |||||||| ||||||||||| ||||||||| | | Sbjct: 508 agggacaagagggtgag---------gctgccacggaggaagcaaaaaagagcaaccatg 558 Query: 483 tccagaggaagcttgagaagcgtcagcaggggcgcactctggactcacacattgaggagc 542 | |||||||||||| ||||||||||| |||||||||||||| |||||||| |||| Sbjct: 559 ttgtgaggaagcttgaaaagcgtcagcaaactcgcactctggactcgcacattgaagagc 618 Query: 543 agttcagcggtggaaggttgctggcttgcatttcgtctcgccctgggccagtgtgggaga 602 | || || | |||||| | |||| ||||| || || || |||||| || ||||| ||| Sbjct: 619 aatttggcagcggaaggctcttggcctgcatctcctcccggcctggg-caatgtggcaga 677 Query: 603 gctgatgggtacat 616 |||||||||||||| Sbjct: 678 gctgatgggtacat 691
>gb|BT016470.1| Zea mays clone Contig303 mRNA sequence Length = 936 Score = 452 bits (228), Expect = e-124 Identities = 349/388 (89%), Gaps = 1/388 (0%) Strand = Plus / Plus Query: 4 gccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagca 63 ||||| |||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| Sbjct: 54 gccacaatgggtatctcgcgtg-actcgatgcacaagcgccgagccaccggtggaaagca 112 Query: 64 gaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagct 123 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||| | Sbjct: 113 gaaggcctggaggaagaagcgaaagtatgagcttggtcgccagccagccaacaccaagtt 172 Query: 124 ttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggc 183 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 gtcaagcaataagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggc 232 Query: 184 tctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccg 243 ||| || || || |||||||||| ||||||||| ||||| || |||||||||||||| Sbjct: 233 tcttcgccttgatactggtaactactcatggggaagtgaagctgttacccgcaagacccg 292 Query: 244 tctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgt 303 | |||| || ||||| |||||| | ||||||||||||||||||||||| || |||||||| Sbjct: 293 tatcctcgacgtggtctacaatgcatcaaacaatgagcttgtgaggacacaaacccttgt 352 Query: 304 gaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatta 363 ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 353 gaagagtgccattgtgcaagttgatgctgccccattcaagcagtggtacctcactcacta 412 Query: 364 tggagtggaaatcggtaggaagaagaaa 391 |||||| || || ||||||||||||||| Sbjct: 413 tggagttgacattggtaggaagaagaaa 440 Score = 93.7 bits (47), Expect = 6e-16 Identities = 123/147 (83%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 470 aagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgcactctggactca 529 ||||||||| | ||| |||||||||||||||||| || |||| || || || ||| || Sbjct: 507 aagagcaaccatgtcacgaggaagcttgagaagcgcaaggagggacgtacccttgaccca 566 Query: 530 cacattgaggagcagttcagcggtggaaggttgctggcttgcatttcgtctcgccctggg 589 |||||||||||||| || || ||||| |||||||||| |||||||| || |||||| || Sbjct: 567 cacattgaggagcaatttggcagtggacggttgctggcatgcatttcttcccgccct-gg 625 Query: 590 ccagtgtgggagagctgatgggtacat 616 |||||||| |||||||||||||||| Sbjct: 626 acagtgtggccgagctgatgggtacat 652
>gb|U64436.1|ZMU64436 Zea mays ribosomal protein S8 mRNA, complete cds Length = 843 Score = 452 bits (228), Expect = e-124 Identities = 349/388 (89%), Gaps = 1/388 (0%) Strand = Plus / Plus Query: 4 gccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagca 63 ||||| |||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| Sbjct: 32 gccacaatgggtatctcgcgtg-actcgatgcacaagcgccgagccaccggtggaaagca 90 Query: 64 gaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagct 123 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||| | Sbjct: 91 gaaggcctggaggaagaagcgaaagtatgagcttggtcgccagccagccaacaccaagtt 150 Query: 124 ttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggc 183 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 gtcaagcaataagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggc 210 Query: 184 tctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccg 243 ||| || || || |||||||||| ||||||||| ||||| || |||||||||||||| Sbjct: 211 tcttcgccttgatactggtaactactcatggggaagtgaagctgttacccgcaagacccg 270 Query: 244 tctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgt 303 | |||| || ||||| |||||| | ||||||||||||||||||||||| || |||||||| Sbjct: 271 tatcctcgacgtggtctacaatgcatcaaacaatgagcttgtgaggacacaaacccttgt 330 Query: 304 gaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatta 363 ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 331 gaagagtgccattgtgcaagttgatgctgccccattcaagcagtggtacctcactcacta 390 Query: 364 tggagtggaaatcggtaggaagaagaaa 391 |||||| || || ||||||||||||||| Sbjct: 391 tggagttgacattggtaggaagaagaaa 418 Score = 93.7 bits (47), Expect = 6e-16 Identities = 123/147 (83%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 470 aagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgcactctggactca 529 ||||||||| | ||| |||||||||||||||||| || |||| || || || ||| || Sbjct: 485 aagagcaaccatgtcacgaggaagcttgagaagcgcaaggagggacgtacccttgaccca 544 Query: 530 cacattgaggagcagttcagcggtggaaggttgctggcttgcatttcgtctcgccctggg 589 |||||||||||||| || || ||||| |||||||||| |||||||| || |||||| || Sbjct: 545 cacattgaggagcaatttggcagtggacggttgctggcatgcatttcttcccgccct-gg 603 Query: 590 ccagtgtgggagagctgatgggtacat 616 |||||||| |||||||||||||||| Sbjct: 604 acagtgtggccgagctgatgggtacat 630
>gb|AY103570.1| Zea mays PCO088401 mRNA sequence Length = 1107 Score = 444 bits (224), Expect = e-121 Identities = 348/388 (89%), Gaps = 1/388 (0%) Strand = Plus / Plus Query: 4 gccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagca 63 ||||| |||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| Sbjct: 85 gccacaatgggtatctcgcgtg-actcgatgcacaagcgccgagccaccggtggaaagca 143 Query: 64 gaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagct 123 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||| | Sbjct: 144 gaaggcctggaggaagaagcgaaagtatgagcttggtcgccagccagccaacaccaagtt 203 Query: 124 ttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggc 183 || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 204 gtcaagcaataagacagtgaggagggtccgtgttcggggaggtaatgtgaaatggagggc 263 Query: 184 tctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccg 243 ||| || || || |||||||||| ||||||||| ||||| || |||||||||||||| Sbjct: 264 tcttcgccttgatactggtaactactcatggggaagtgaagctgttacccgcaagacccg 323 Query: 244 tctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgt 303 | |||| || ||||| |||||| | ||||||||||||||||||||||| || |||||||| Sbjct: 324 tatcctcgacgtggtctacaatgcatcaaacaatgagcttgtgaggacacaaacccttgt 383 Query: 304 gaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatta 363 ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 384 gaagagtgccattgtgcaagttgatgctgccccattcaagcagtggtacctcactcacta 443 Query: 364 tggagtggaaatcggtaggaagaagaaa 391 |||||| || || ||||||||||||||| Sbjct: 444 tggagttgacattggtaggaagaagaaa 471 Score = 93.7 bits (47), Expect = 6e-16 Identities = 123/147 (83%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 470 aagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgcactctggactca 529 ||||||||| | ||| |||||||||||||||||| || |||| || || || ||| || Sbjct: 538 aagagcaaccatgtcacgaggaagcttgagaagcgcaaggagggacgtacccttgaccca 597 Query: 530 cacattgaggagcagttcagcggtggaaggttgctggcttgcatttcgtctcgccctggg 589 |||||||||||||| || || ||||| |||||||||| |||||||| || |||||| || Sbjct: 598 cacattgaggagcaatttggcagtggacggttgctggcatgcatttcttcccgccct-gg 656 Query: 590 ccagtgtgggagagctgatgggtacat 616 |||||||| |||||||||||||||| Sbjct: 657 acagtgtggccgagctgatgggtacat 683
>dbj|D38010.1|RICRPS8 Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S8, complete cds Length = 849 Score = 428 bits (216), Expect = e-117 Identities = 346/388 (89%), Gaps = 1/388 (0%) Strand = Plus / Plus Query: 3 cgccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagc 62 |||| |||||||||||||||||| | ||||||||||||||||| ||||| || || |||| Sbjct: 49 cgccgccatgggtatctcgcgtg-attccatgcacaagcgccgcgccacgggcggcaagc 107 Query: 63 agaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagc 122 ||||||||||| | |||||||||||||||||||| || | |||||||||||||| |||| Sbjct: 108 agaaggcatggcgcaagaagcgaaagtatgagctcggaaggcagcctgccaacaccaagc 167 Query: 123 tttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggaggg 182 | || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 168 tgtcaagcaacaagacagtgaggagggtgcgtgtccgtggaggtaatgtgaaatggaggg 227 Query: 183 ctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagaccc 242 | |||||| |||| ||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 228 ccctccgtttggatactggcaactactcatggggaagtgaggccgtgacccgcaagaccc 287 Query: 243 gtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttg 302 || |||| |||||||| |||||| | || |||||||||||||| |||||||||||||||| Sbjct: 288 gtatccttgatgtggtctacaatgcatccaacaatgagcttgtcaggactcagacccttg 347 Query: 303 tgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatt 362 | |||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 348 taaagagtgctattgtgcaagttgatgctgcccccttcaagcagtggtacctcactcact 407 Query: 363 atggagtggaaatcggtaggaagaagaa 390 |||||||||| || |||||||||||||| Sbjct: 408 atggagtggatattggtaggaagaagaa 435 Score = 75.8 bits (38), Expect = 2e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 453 ccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagg 512 ||||||||||||| ||||| |||||| | || ||||||||||||||||| || |||| Sbjct: 483 ccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagg 542 Query: 513 ggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgca 572 | ||||| || ||| | ||||| || || ||||| || |||| ||||||||||| |||| Sbjct: 543 gacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgca 602 Query: 573 tttcgtctcgccctgggc 590 |||| || |||||||||| Sbjct: 603 tttcttcccgccctgggc 620
>ref|XM_465742.1| Oryza sativa (japonica cultivar-group), mRNA Length = 932 Score = 422 bits (213), Expect = e-115 Identities = 352/397 (88%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 3 cgccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagc 62 |||| |||||||||||||||||| | ||||||||||||||||| ||||| || || |||| Sbjct: 79 cgccgccatgggtatctcgcgtg-attccatgcacaagcgccgcgccacgggcggcaagc 137 Query: 63 agaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagc 122 ||||||||||| | |||||||||||||||||||| || | |||||||||||||| |||| Sbjct: 138 agaaggcatggcgcaagaagcgaaagtatgagctcggaaggcagcctgccaacaccaagc 197 Query: 123 tttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggaggg 182 | || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 198 tgtcaagcaacaagacagtgaggagggtgcgtgtccgtggaggtaatgtgaaatggaggg 257 Query: 183 ctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagaccc 242 | |||||| |||| ||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 258 ccctccgtttggatactggcaactactcatggggaagtgaggccgtgacccgcaagaccc 317 Query: 243 gtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttg 302 || |||| |||||||| |||||| | || |||||||||||||| |||||||||||||||| Sbjct: 318 gtatccttgatgtggtctacaatgcatccaacaatgagcttgtcaggactcagacccttg 377 Query: 303 tgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatt 362 | |||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 378 taaagagtgctattgtgcaagttgatgctgcccccttcaagcagtggtacctcactcact 437 Query: 363 atggagtggaaatcggtaggaagaagaaagctgctgc 399 |||||||||| || ||||| |||||||| ||| |||| Sbjct: 438 atggagtggatattggtagaaagaagaaggctcctgc 474 Score = 75.8 bits (38), Expect = 2e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 453 ccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagg 512 ||||||||||||| ||||| |||||| | || ||||||||||||||||| || |||| Sbjct: 513 ccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagg 572 Query: 513 ggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgca 572 | ||||| || ||| | ||||| || || ||||| || |||| ||||||||||| |||| Sbjct: 573 gacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgca 632 Query: 573 tttcgtctcgccctgggc 590 |||| || |||||||||| Sbjct: 633 tttcttcccgccctgggc 650
>ref|XM_506804.1| PREDICTED Oryza sativa (japonica cultivar-group), P0483C08.42 mRNA Length = 942 Score = 422 bits (213), Expect = e-115 Identities = 352/397 (88%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 3 cgccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagc 62 |||| |||||||||||||||||| | ||||||||||||||||| ||||| || || |||| Sbjct: 81 cgccgccatgggtatctcgcgtg-attccatgcacaagcgccgcgccacgggcggcaagc 139 Query: 63 agaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagc 122 ||||||||||| | |||||||||||||||||||| || | |||||||||||||| |||| Sbjct: 140 agaaggcatggcgcaagaagcgaaagtatgagctcggaaggcagcctgccaacaccaagc 199 Query: 123 tttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggaggg 182 | || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 200 tgtcaagcaacaagacagtgaggagggtgcgtgtccgtggaggtaatgtgaaatggaggg 259 Query: 183 ctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagaccc 242 | |||||| |||| ||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 260 ccctccgtttggatactggcaactactcatggggaagtgaggccgtgacccgcaagaccc 319 Query: 243 gtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttg 302 || |||| |||||||| |||||| | || |||||||||||||| |||||||||||||||| Sbjct: 320 gtatccttgatgtggtctacaatgcatccaacaatgagcttgtcaggactcagacccttg 379 Query: 303 tgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatt 362 | |||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 380 taaagagtgctattgtgcaagttgatgctgcccccttcaagcagtggtacctcactcact 439 Query: 363 atggagtggaaatcggtaggaagaagaaagctgctgc 399 |||||||||| || ||||| |||||||| ||| |||| Sbjct: 440 atggagtggatattggtagaaagaagaaggctcctgc 476 Score = 75.8 bits (38), Expect = 2e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 453 ccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagg 512 ||||||||||||| ||||| |||||| | || ||||||||||||||||| || |||| Sbjct: 515 ccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagg 574 Query: 513 ggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgca 572 | ||||| || ||| | ||||| || || ||||| || |||| ||||||||||| |||| Sbjct: 575 gacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgca 634 Query: 573 tttcgtctcgccctgggc 590 |||| || |||||||||| Sbjct: 635 tttcttcccgccctgggc 652
>dbj|AK102757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107B18, full insert sequence Length = 932 Score = 422 bits (213), Expect = e-115 Identities = 352/397 (88%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 3 cgccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagc 62 |||| |||||||||||||||||| | ||||||||||||||||| ||||| || || |||| Sbjct: 79 cgccgccatgggtatctcgcgtg-attccatgcacaagcgccgcgccacgggcggcaagc 137 Query: 63 agaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagc 122 ||||||||||| | |||||||||||||||||||| || | |||||||||||||| |||| Sbjct: 138 agaaggcatggcgcaagaagcgaaagtatgagctcggaaggcagcctgccaacaccaagc 197 Query: 123 tttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggaggg 182 | || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 198 tgtcaagcaacaagacagtgaggagggtgcgtgtccgtggaggtaatgtgaaatggaggg 257 Query: 183 ctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagaccc 242 | |||||| |||| ||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 258 ccctccgtttggatactggcaactactcatggggaagtgaggccgtgacccgcaagaccc 317 Query: 243 gtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttg 302 || |||| |||||||| |||||| | || |||||||||||||| |||||||||||||||| Sbjct: 318 gtatccttgatgtggtctacaatgcatccaacaatgagcttgtcaggactcagacccttg 377 Query: 303 tgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatt 362 | |||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 378 taaagagtgctattgtgcaagttgatgctgcccccttcaagcagtggtacctcactcact 437 Query: 363 atggagtggaaatcggtaggaagaagaaagctgctgc 399 |||||||||| || ||||| |||||||| ||| |||| Sbjct: 438 atggagtggatattggtagaaagaagaaggctcctgc 474 Score = 75.8 bits (38), Expect = 2e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 453 ccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagg 512 ||||||||||||| ||||| |||||| | || ||||||||||||||||| || |||| Sbjct: 513 ccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagg 572 Query: 513 ggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgca 572 | ||||| || ||| | ||||| || || ||||| || |||| ||||||||||| |||| Sbjct: 573 gacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgca 632 Query: 573 tttcgtctcgccctgggc 590 |||| || |||||||||| Sbjct: 633 tttcttcccgccctgggc 650
>dbj|AK102402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092J19, full insert sequence Length = 940 Score = 414 bits (209), Expect = e-112 Identities = 351/397 (88%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 3 cgccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagc 62 |||| |||||||||||||||||| | ||||||||||||||||| ||||| || || |||| Sbjct: 79 cgccgccatgggtatctcgcgtg-attccatgcacaagcgccgcgccacgggcggcaagc 137 Query: 63 agaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagc 122 ||||||||||| | |||||||||||||||||||| || | |||||||||||||| |||| Sbjct: 138 agaaggcatggcgcaagaagcgaaagtatgagctcggaaggcagcctgccaacaccaagc 197 Query: 123 tttcgagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggaggg 182 | || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 198 tgtcaagcaacaagacagtgaggagggtgcgtgtccgtggaggtaatgtgaaatggaggg 257 Query: 183 ctctccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagaccc 242 | |||||| |||| ||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 258 ccctccgtttggatactggcaactactcatggggaagtgaggccgtgacccgcaagaccc 317 Query: 243 gtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttg 302 || |||| |||||||| |||||| | || |||||||||||||| |||||||||||||||| Sbjct: 318 gtatccttgatgtggtctacaatgcatccaacaatgagcttgtcaggactcagacccttg 377 Query: 303 tgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcatt 362 | |||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 378 taaagagtgctattgtgcaagttgatgctgcccccttcaagcagtggtacctcactcacg 437 Query: 363 atggagtggaaatcggtaggaagaagaaagctgctgc 399 |||||||||| || ||||| |||||||| ||| |||| Sbjct: 438 atggagtggatattggtagaaagaagaaggctcctgc 474 Score = 75.8 bits (38), Expect = 2e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 453 ccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagg 512 ||||||||||||| ||||| |||||| | || ||||||||||||||||| || |||| Sbjct: 513 ccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagg 572 Query: 513 ggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgca 572 | ||||| || ||| | ||||| || || ||||| || |||| ||||||||||| |||| Sbjct: 573 gacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgca 632 Query: 573 tttcgtctcgccctgggc 590 |||| || |||||||||| Sbjct: 633 tttcttcccgccctgggc 650
>gb|BT016841.1| Zea mays clone Contig674 mRNA sequence Length = 989 Score = 396 bits (200), Expect = e-107 Identities = 339/384 (88%), Gaps = 1/384 (0%) Strand = Plus / Plus Query: 7 accatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaa 66 |||||||||||||| |||| | || |||||||||||||||||||||||||| |||||||| Sbjct: 99 accatgggtatctcacgtg-attcgatgcacaagcgccgggccaccggtggaaagcagaa 157 Query: 67 ggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagctttc 126 | | ||| | ||||||||||||||||||||||||||||||||||| ||||| || || || Sbjct: 158 gacgtggcgcaagaagcgaaagtatgagcttggccgccagcctgctaacaccaaactgtc 217 Query: 127 gagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggctct 186 ||||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||| Sbjct: 218 tagcaataagacagtgaggagggtccgtgtacgtggaggcaacgtgaagtggagggctct 277 Query: 187 ccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccgtct 246 ||| |||| || ||||||| ||| ||||| |||||||| |||||||||||||| | Sbjct: 278 ccgattggatacaggtaactactcgtggggaagtgaggctcttacccgcaagacccgcat 337 Query: 247 cctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaa 306 |||||||||||| || ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 338 cctggatgtggtctataatgcatcaaacaatgagcttgtgaggactcagactcttgtgaa 397 Query: 307 gaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatgg 366 || |||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 398 gagcgccattgtacaagttgatgctgctccattcaagcagtggtacctcactcactatgg 457 Query: 367 agtggaaatcggtaggaagaagaa 390 |||||| ||||||||||||||||| Sbjct: 458 agtggacatcggtaggaagaagaa 481
>gb|AY105565.1| Zea mays PCO103958 mRNA sequence Length = 1091 Score = 389 bits (196), Expect = e-105 Identities = 338/384 (88%), Gaps = 1/384 (0%) Strand = Plus / Plus Query: 7 accatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaa 66 |||||||||||||| |||| | || |||||||||||||| ||||||||||| |||||||| Sbjct: 118 accatgggtatctcacgtg-attcgatgcacaagcgccgtgccaccggtggaaagcagaa 176 Query: 67 ggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagctttc 126 ||| ||| | |||||||||||||||||||||||||| |||||||| ||||| || || || Sbjct: 177 ggcgtggcgcaagaagcgaaagtatgagcttggccgtcagcctgctaacaccaaactgtc 236 Query: 127 gagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggctct 186 ||||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||| Sbjct: 237 tagcaataagacagtgaggagggtccgtgtccgtggaggcaacgtgaagtggagggctct 296 Query: 187 ccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccgtct 246 ||| |||| || ||||||| ||| ||||| |||||||| |||||||||||||| | Sbjct: 297 ccgattggatacaggtaactactcgtggggaagtgaggctcttacccgcaagacccgcat 356 Query: 247 cctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaa 306 |||||||||||| || ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 357 cctggatgtggtctataatgcatcaaacaatgagcttgtgaggactcagactcttgtgaa 416 Query: 307 gaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatgg 366 || |||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 417 gagcgccattgtacaagttgatgctgctccattcaagcagtggtacctcactcactatgg 476 Query: 367 agtggaaatcggtaggaagaagaa 390 |||||| ||||||||||||||||| Sbjct: 477 agtggacatcggtaggaagaagaa 500
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 349 bits (176), Expect = 7e-93 Identities = 298/338 (88%), Gaps = 3/338 (0%) Strand = Plus / Minus Query: 88 gtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagacagtgaggag 147 |||||||||||| |||||||| || ||||| ||| | ||||||||||||||||||||||| Sbjct: 16660797 gtatgagcttggtcgccagccggcaaacaccaagttgtcgagcaacaagacagtgaggag 16660738 Query: 148 ggtccgtgttcgtggaggtaatgtgaaatggagggctctccgtctggacactggtaactt 207 |||||||||||||||||| ||| |||| ||||||||||| || ||||| |||||||||| Sbjct: 16660737 ggtccgtgttcgtggaggaaatctgaagtggagggctcttcgcctggatactggtaacta 16660678 Query: 208 ctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattc 267 || ||||| |||||||| || |||||||||||| |||| |||||||| |||||| | Sbjct: 16660677 ttcttggggaagtgaggctgtcactcgcaagacccgtatccttgatgtggtctacaatgc 16660618 Query: 268 gtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttga 327 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 16660617 gtcaaacaatgagcttgtgaggacccagacccttgtgaagagtgccattgtgcaagttga 16660558 Query: 328 tgctgcccctttcaagcagtggtacctgactcattatggagtggaaatcggtaggaagaa 387 ||||||||| |||||||||||||| || ||||| ||||| || || |||||||||||||| Sbjct: 16660557 tgctgccccattcaagcagtggtatctcactcactatggtgtcgatatcggtaggaagaa 16660498 Query: 388 gaaagctgctgccgctgccaaaaaggatgctgctgagg 425 ||||||| || ||||| || |||||||||||||||| Sbjct: 16660497 gaaagctcct---gctgctaagaaggatgctgctgagg 16660463 Score = 123 bits (62), Expect = 7e-25 Identities = 75/78 (96%), Gaps = 1/78 (1%) Strand = Plus / Minus Query: 13 ggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaaggcatg 72 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| || || Sbjct: 16661637 ggtatctcgcgtg-actccatgcacaagcgccgggccaccggtgggaagcagaaagcgtg 16661579 Query: 73 gaggaagaagcgaaagta 90 |||||||||||||||||| Sbjct: 16661578 gaggaagaagcgaaagta 16661561 Score = 81.8 bits (41), Expect = 2e-12 Identities = 135/165 (81%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 449 gctgccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcag 508 |||||||| ||||||||||| ||||||||| | || |||||||||||| ||||||||| Sbjct: 16659932 gctgccacggaggaagcaaaaaagagcaaccatgttgtgaggaagcttgaaaagcgtcag 16659873 Query: 509 caggggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggct 568 || |||||||||||||| |||||||| ||||| || || | |||||| | |||| Sbjct: 16659872 caaactcgcactctggactcgcacattgaagagcaatttggcagcggaaggctcttggcc 16659813 Query: 569 tgcatttcgtctcgccctgggccagtgtgggagagctgatgggta 613 ||||| || || || |||||| || ||||| |||||||||||||| Sbjct: 16659812 tgcatctcctcccggcctggg-caatgtggcagagctgatgggta 16659769
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 333 bits (168), Expect = 4e-88 Identities = 264/296 (89%) Strand = Plus / Plus Query: 104 cagcctgccaacactaagctttcgagcaacaagacagtgaggagggtccgtgttcgtgga 163 |||||||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||| Sbjct: 17136269 cagcctgccaacaccaagctgtcaagcaacaagacagtgaggagggtgcgtgtccgtgga 17136328 Query: 164 ggtaatgtgaaatggagggctctccgtctggacactggtaacttctcatggggtagtgag 223 |||||||||||||||||||| |||||| |||| ||||| |||| ||||||||| |||||| Sbjct: 17136329 ggtaatgtgaaatggagggccctccgtttggatactggcaactactcatggggaagtgag 17136388 Query: 224 gccacaacccgcaagacccgtctcctggatgtggtttacaattcgtcaaacaatgagctt 283 ||| ||||||||||||||| |||| |||||||| |||||| | || |||||||||||| Sbjct: 17136389 gccgtgacccgcaagacccgtatccttgatgtggtctacaatgcatccaacaatgagctt 17136448 Query: 284 gtgaggactcagacccttgtgaagaatgccattgtgcaagttgatgctgcccctttcaag 343 || ||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| Sbjct: 17136449 gtcaggactcagacccttgtaaagagtgctattgtgcaagttgatgctgcccccttcaag 17136508 Query: 344 cagtggtacctgactcattatggagtggaaatcggtaggaagaagaaagctgctgc 399 ||||||||||| ||||| ||||||||||| || ||||| |||||||| ||| |||| Sbjct: 17136509 cagtggtacctcactcactatggagtggatattggtagaaagaagaaggctcctgc 17136564 Score = 81.8 bits (41), Expect = 2e-12 Identities = 132/161 (81%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 453 ccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagg 512 ||||||||||||| ||||| |||||| | || ||||||||||||||||| || |||| Sbjct: 17137238 ccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagg 17137297 Query: 513 ggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgca 572 | ||||| || ||| | ||||| || || ||||| || |||| ||||||||||| |||| Sbjct: 17137298 gacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgca 17137357 Query: 573 tttcgtctcgccctgggccagtgtgggagagctgatgggta 613 |||| || ||||||||| |||||||| |||| |||||||| Sbjct: 17137358 tttcttcccgccctggg-cagtgtggccgagcagatgggta 17137397 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 13 ggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaaggcatg 72 ||||||||||||| | ||||||||||||||||| ||||| || || |||||||||||||| Sbjct: 17135582 ggtatctcgcgtg-attccatgcacaagcgccgcgccacgggcggcaagcagaaggcatg 17135640 Query: 73 gaggaagaagcgaaagt 89 | | ||||||||||||| Sbjct: 17135641 gcgcaagaagcgaaagt 17135657 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 429 aagaggctgaggttgctgctgctgc 453 |||||||||||||| |||||||||| Sbjct: 12162676 aagaggctgaggttactgctgctgc 12162652
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0483C08 Length = 143855 Score = 333 bits (168), Expect = 4e-88 Identities = 264/296 (89%) Strand = Plus / Plus Query: 104 cagcctgccaacactaagctttcgagcaacaagacagtgaggagggtccgtgttcgtgga 163 |||||||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||| Sbjct: 117642 cagcctgccaacaccaagctgtcaagcaacaagacagtgaggagggtgcgtgtccgtgga 117701 Query: 164 ggtaatgtgaaatggagggctctccgtctggacactggtaacttctcatggggtagtgag 223 |||||||||||||||||||| |||||| |||| ||||| |||| ||||||||| |||||| Sbjct: 117702 ggtaatgtgaaatggagggccctccgtttggatactggcaactactcatggggaagtgag 117761 Query: 224 gccacaacccgcaagacccgtctcctggatgtggtttacaattcgtcaaacaatgagctt 283 ||| ||||||||||||||| |||| |||||||| |||||| | || |||||||||||| Sbjct: 117762 gccgtgacccgcaagacccgtatccttgatgtggtctacaatgcatccaacaatgagctt 117821 Query: 284 gtgaggactcagacccttgtgaagaatgccattgtgcaagttgatgctgcccctttcaag 343 || ||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| Sbjct: 117822 gtcaggactcagacccttgtaaagagtgctattgtgcaagttgatgctgcccccttcaag 117881 Query: 344 cagtggtacctgactcattatggagtggaaatcggtaggaagaagaaagctgctgc 399 ||||||||||| ||||| ||||||||||| || ||||| |||||||| ||| |||| Sbjct: 117882 cagtggtacctcactcactatggagtggatattggtagaaagaagaaggctcctgc 117937 Score = 81.8 bits (41), Expect = 2e-12 Identities = 132/161 (81%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 453 ccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagg 512 ||||||||||||| ||||| |||||| | || ||||||||||||||||| || |||| Sbjct: 118611 ccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagg 118670 Query: 513 ggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgca 572 | ||||| || ||| | ||||| || || ||||| || |||| ||||||||||| |||| Sbjct: 118671 gacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgca 118730 Query: 573 tttcgtctcgccctgggccagtgtgggagagctgatgggta 613 |||| || ||||||||| |||||||| |||| |||||||| Sbjct: 118731 tttcttcccgccctggg-cagtgtggccgagcagatgggta 118770 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 13 ggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaaggcatg 72 ||||||||||||| | ||||||||||||||||| ||||| || || |||||||||||||| Sbjct: 116955 ggtatctcgcgtg-attccatgcacaagcgccgcgccacgggcggcaagcagaaggcatg 117013 Query: 73 gaggaagaagcgaaagt 89 | | ||||||||||||| Sbjct: 117014 gcgcaagaagcgaaagt 117030
>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0048K16 Length = 159891 Score = 333 bits (168), Expect = 4e-88 Identities = 264/296 (89%) Strand = Plus / Plus Query: 104 cagcctgccaacactaagctttcgagcaacaagacagtgaggagggtccgtgttcgtgga 163 |||||||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||| Sbjct: 7036 cagcctgccaacaccaagctgtcaagcaacaagacagtgaggagggtgcgtgtccgtgga 7095 Query: 164 ggtaatgtgaaatggagggctctccgtctggacactggtaacttctcatggggtagtgag 223 |||||||||||||||||||| |||||| |||| ||||| |||| ||||||||| |||||| Sbjct: 7096 ggtaatgtgaaatggagggccctccgtttggatactggcaactactcatggggaagtgag 7155 Query: 224 gccacaacccgcaagacccgtctcctggatgtggtttacaattcgtcaaacaatgagctt 283 ||| ||||||||||||||| |||| |||||||| |||||| | || |||||||||||| Sbjct: 7156 gccgtgacccgcaagacccgtatccttgatgtggtctacaatgcatccaacaatgagctt 7215 Query: 284 gtgaggactcagacccttgtgaagaatgccattgtgcaagttgatgctgcccctttcaag 343 || ||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| Sbjct: 7216 gtcaggactcagacccttgtaaagagtgctattgtgcaagttgatgctgcccccttcaag 7275 Query: 344 cagtggtacctgactcattatggagtggaaatcggtaggaagaagaaagctgctgc 399 ||||||||||| ||||| ||||||||||| || ||||| |||||||| ||| |||| Sbjct: 7276 cagtggtacctcactcactatggagtggatattggtagaaagaagaaggctcctgc 7331 Score = 81.8 bits (41), Expect = 2e-12 Identities = 132/161 (81%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 453 ccacagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagg 512 ||||||||||||| ||||| |||||| | || ||||||||||||||||| || |||| Sbjct: 8005 ccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagg 8064 Query: 513 ggcgcactctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgca 572 | ||||| || ||| | ||||| || || ||||| || |||| ||||||||||| |||| Sbjct: 8065 gacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgca 8124 Query: 573 tttcgtctcgccctgggccagtgtgggagagctgatgggta 613 |||| || ||||||||| |||||||| |||| |||||||| Sbjct: 8125 tttcttcccgccctggg-cagtgtggccgagcagatgggta 8164 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 13 ggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaaggcatg 72 ||||||||||||| | ||||||||||||||||| ||||| || || |||||||||||||| Sbjct: 6349 ggtatctcgcgtg-attccatgcacaagcgccgcgccacgggcggcaagcagaaggcatg 6407 Query: 73 gaggaagaagcgaaagt 89 | | ||||||||||||| Sbjct: 6408 gcgcaagaagcgaaagt 6424
>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds Length = 158797 Score = 252 bits (127), Expect = 1e-63 Identities = 259/303 (85%) Strand = Plus / Plus Query: 88 gtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagacagtgaggag 147 |||||||||||||||||||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 137278 gtatgagcttggccgccagcctgctaacaccaaactgtctagcaataagacagtgaggag 137337 Query: 148 ggtccgtgttcgtggaggtaatgtgaaatggagggctctccgtctggacactggtaactt 207 ||||||||| |||||||| || ||| ||||||||||| || | || || |||||| Sbjct: 137338 ggtccgtgtccgtggaggcaacacgaagtggagggctcttcgattcgatacatgtaacta 137397 Query: 208 ctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattc 267 ||| ||||| |||||||| ||||||||||| || ||||||||||||| || | | | Sbjct: 137398 ctcgtggggaagtgaggctcttacccgcaagactcgcatcctggatgtggtctatattgc 137457 Query: 268 gtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttga 327 |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 137458 aacaaacaatgagcttgtgaggactcagactcttgtgaagagcgccattgtacaagttga 137517 Query: 328 tgctgcccctttcaagcagtggtacctgactcattatggagtggaaatcggtaggaagaa 387 |||||| || ||||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 137518 tgctgctccattcaagcagtggtacctcactcactatggagtggacatcggtaggaagaa 137577 Query: 388 gaa 390 ||| Sbjct: 137578 gaa 137580
>gb|AF071889.1|AF071889 Prunus armeniaca 40S ribosomal protein S8 (RPS8) mRNA, complete cds Length = 1049 Score = 200 bits (101), Expect = 4e-48 Identities = 321/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 7 accatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaa 66 |||||||||||||| |||| |||| |||||||| | || ||||| || || ||| |||| Sbjct: 76 accatgggtatctcacgtg-actcgatgcacaaaagacgtgccactggaggcaagaagaa 134 Query: 67 ggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagctttc 126 |||||||||||||||| ||||||||||||| || || |||||||| || ||||||||||| Sbjct: 135 ggcatggaggaagaagagaaagtatgagctcggtcgtcagcctgcaaatactaagctttc 194 Query: 127 gagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggctct 186 ||||||||||| || ||| | ||||||| || ||||| |||||||| ||||| ||||| Sbjct: 195 aagcaacaagactgttaggcgaatccgtgtgcggggaggcaatgtgaagtggagagctct 254 Query: 187 ccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccgtct 246 | | |||| |||||||||||||||||||||||||| || || || || |||||||| Sbjct: 255 caggttggatactggtaacttctcatggggtagtgaagctgttactcgtaaaacccgtct 314 Query: 247 cctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaa 306 ||||||||| || |||||| | ||||||||||| ||||| || || || || || ||||| Sbjct: 315 cctggatgttgtatacaatgcctcaaacaatgaacttgttagaacgcaaactctggtgaa 374 Query: 307 gaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatgg 366 | ||||||||| || || ||||| || || || ||||| |||||||| ||||| || Sbjct: 375 aagtgccattgtccaggtggatgcagctccatttaagcaatggtaccttcaacattacgg 434 Query: 367 agtggaaatcggtaggaagaagaaagctgctgc 399 ||| ||||| || || |||||||| ||||||| Sbjct: 435 agttgaaattggcagaaagaagaagactgctgc 467 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 455 acagaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcagggg 514 |||||||||||||||||||| ||| | || || |||||||| ||||||||||| || Sbjct: 505 acagaggaagcaaagaagagtaaccatgttgcgataaagcttgaaaagcgtcagcaaggt 564 Query: 515 cgcactctggactcacacattgaggagcagtt 546 ||||| |||||| | || ||||| |||||||| Sbjct: 565 cgcaccctggacgcccatattgaagagcagtt 596
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 172 bits (87), Expect = 9e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 252 atgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatg 311 ||||||| || ||| | ||||||||||||||||||||||||||||| |||||||||| | Sbjct: 206785 atgtggtctataatgcatcaaacaatgagcttgtgaggactcagactcttgtgaagagcg 206726 Query: 312 ccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatggagtgg 371 ||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 206725 ccattgtacaagttgatgctgcaccattcaagcagtggtacctcactcactatggagtgg 206666 Query: 372 aaatcggtaggaagaagaa 390 | ||||||||||||||||| Sbjct: 206665 acatcggtaggaagaagaa 206647
>gb|DQ002406.1| Zea mays copia retrotransposon ji and helitron Mo17_14577, complete sequence Length = 92777 Score = 165 bits (83), Expect = 2e-37 Identities = 125/139 (89%) Strand = Plus / Plus Query: 252 atgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatg 311 ||||||| || ||| | ||||||||||||||||||||||||||||| |||||||||| | Sbjct: 64283 atgtggtctataatgcatcaaacaatgagcttgtgaggactcagactcttgtgaagagcg 64342 Query: 312 ccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatggagtgg 371 ||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 64343 ccattgtacaagttgatgctgcaccattcaagcagtggtacctcactcactatggagtgg 64402 Query: 372 aaatcggtaggaagaagaa 390 | ||||||||||| ||||| Sbjct: 64403 acatcggtaggaaaaagaa 64421
>gb|M95064.1|MZEORFE Zea mays putative ribosomal protein S8 mRNA, partial cds Length = 163 Score = 155 bits (78), Expect = 2e-34 Identities = 106/114 (92%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 4 gccaccatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagca 63 ||||| |||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| Sbjct: 33 gccacaatgggtatctcgcgtg-actcgatgcacaagcgccgagccaccggtggaaagca 91 Query: 64 gaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacac 117 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 92 gaaggcctggaggaagaagcgaaagtatgagcttggtcgccagccagccaacac 145
>gb|DQ002408.1| Zea mays gypsy retrotransposon huck, and copia retrotransposon ji, complete sequence; and helitron Mo17_14594, complete sequence Length = 57607 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 252 atgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatg 311 ||||||| || ||| | ||||||||||||||||||||||||||||| |||||||||| | Sbjct: 56061 atgtggtctataatgcatcaaacaatgagcttgtgaggactcagactcttgtgaagagcg 56120 Query: 312 ccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatggagtgg 371 ||||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||| Sbjct: 56121 ccattgtacaagttgatgctgcaccattcaagcactggtacctcactcactatggagtgg 56180 Query: 372 aaatcggtaggaagaag 388 | ||| ||||||||||| Sbjct: 56181 acatcagtaggaagaag 56197
>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1, xilon1 retrotransposon, helitron B73_14578, gypsy retrotransposon huck1 and ruda retrotransposon, complete sequence Length = 152384 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 252 atgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatg 311 ||||||| || ||| | ||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102819 atgtggtctataatgcatcaaacaatgagcttgtgaggactcagactcttgtgaagagcg 102878 Query: 312 ccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatggagtgg 371 ||||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||| Sbjct: 102879 ccattgtacaagttgatgctgcaccattcaagcactggtacctcactcactatggagtgg 102938 Query: 372 aaatcggtaggaagaag 388 | ||| ||||||||||| Sbjct: 102939 acatcagtaggaagaag 102955
>gb|BT013911.1| Lycopersicon esculentum clone 132908R, mRNA sequence Length = 833 Score = 145 bits (73), Expect = 2e-31 Identities = 305/381 (80%), Gaps = 1/381 (0%) Strand = Plus / Plus Query: 7 accatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaa 66 |||||||||||||| || | |||| |||||||| | || ||||||||||| |||||||| Sbjct: 56 accatgggtatctcacgag-actctatgcacaaaaggcgcgccaccggtggcaagcagaa 114 Query: 67 ggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagctttc 126 |||||||||||||||||||||| ||||||||||| |||||||| || |||||| | || Sbjct: 115 aacatggaggaagaagcgaaagtacgagcttggccgtcagcctgctaatactaagatctc 174 Query: 127 gagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggctct 186 || ||||||||||| || | | ||||||||||| || ||||| ||||||||||| || Sbjct: 175 tagtaacaagacagtcagacgcattcgtgttcgtggtggcaatgttaaatggagggcact 234 Query: 187 ccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccgtct 246 | |||| || || || | ||||||||||| || || || ||||| ||||| ||| | Sbjct: 235 aagattggatacaggaaattattcatggggtagcgaagctaccacccgtaagactcgtat 294 Query: 247 cctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaa 306 ||| || ||||| || ||| | ||||||||||| ||||| | || ||||| ||||| || Sbjct: 295 ccttgacgtggtctataatgcctcaaacaatgaacttgttcgcacacagactcttgtcaa 354 Query: 307 gaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatgg 366 || ||| |||||||| || ||||| || || || || ||||||||||| |||||||| Sbjct: 355 gagtgcaattgtgcaggtggatgcagcaccctttaaacagtggtacctccagcattatgg 414 Query: 367 agtggaaatcggtaggaagaa 387 || || || ||||||||||| Sbjct: 415 tgttgacattggtaggaagaa 435 Score = 48.1 bits (24), Expect = 0.034 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 566 gcttgcatttcgtctcgccctgggccagtgtgggagagctgatgggta 613 |||||||| || ||||||||||| | ||||||| |||||||||||||| Sbjct: 599 gcttgcatctcatctcgccctggtc-agtgtggcagagctgatgggta 645
>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence Length = 137052 Score = 141 bits (71), Expect = 3e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 92 gagcttggccgccagcctgccaacactaagctttcgagcaacaagacagtgaggagggtc 151 ||||| || |||||||| || ||||| || || || ||||||||||||||||||||| | Sbjct: 54867 gagctcggtcgccagccagctaacacaaaactatcaagcaacaagacagtgaggaggatt 54926 Query: 152 cgtgttcgtggaggtaatgtgaaatggagggctctccgtctggacactggtaacttctca 211 |||||| | || || |||||||| ||||| ||||| | |||| || |||||||||||| Sbjct: 54927 cgtgttagaggtggaaatgtgaagtggagagctctgagattggataccggtaacttctca 54986 Query: 212 tggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattcgtca 271 ||||| ||||| ||| || ||||| |||||| | || |||||||| |||||| | || Sbjct: 54987 tggggaagtgaagccgtcactcgcaaaacccgtttgctcgatgtggtgtacaatgcttcc 55046 Query: 272 aacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttgatgct 331 ||||||||| | ||| | |||||||| |||||||||| ||| ||||| || ||||||||| Sbjct: 55047 aacaatgagttggtgcgaactcagactcttgtgaagagtgctattgttcaggttgatgct 55106 Query: 332 gcccctttcaagcagtggtacct 354 || || |||||||| |||||||| Sbjct: 55107 gctcccttcaagcaatggtacct 55129 Score = 93.7 bits (47), Expect = 6e-16 Identities = 212/267 (79%) Strand = Plus / Plus Query: 88 gtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagacagtgaggag 147 ||||||||| || |||||||| || ||||| ||||| || |||||||| |||||| |||| Sbjct: 48611 gtatgagctcggtcgccagccagctaacaccaagctatcaagcaacaaaacagtgcggag 48670 Query: 148 ggtccgtgttcgtggaggtaatgtgaaatggagggctctccgtctggacactggtaactt 207 | |||||| | || || ||| ||||||| || ||| | | |||| ||||| ||| | Sbjct: 48671 tattcgtgttagaggtggcaatttgaaatgtagagctttgaggttggatactggaaacat 48730 Query: 208 ctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattc 267 ||||||||| |||||||| || || || ||||| | || |||||||||||||| | Sbjct: 48731 ctcatggggaagtgaggctgtcactcggaaatcccgtttgctaaatgtggtttacaatgc 48790 Query: 268 gtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttga 327 || ||||| ||||||||| | |||||||| ||||| |||| || |||||||| || || Sbjct: 48791 ttccaacaacgagcttgtgcgaactcagactcttgttaagagcgctattgtgcaggtcga 48850 Query: 328 tgctgcccctttcaagcagtggtacct 354 |||||| || ||||||||||||||||| Sbjct: 48851 tgctgctccgttcaagcagtggtacct 48877 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 53 ggtgggaagcagaaggcatggaggaagaagcgaaagta 90 ||||| ||| |||||||||||||||||||| ||||||| Sbjct: 54003 ggtggcaagaagaaggcatggaggaagaagagaaagta 54040 Score = 48.1 bits (24), Expect = 0.034 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 530 cacattgaggagcagttcagcggtggaaggttgctggcttgcatttcgtctcgccctggg 589 ||||||||||||||||| | |||||| | ||||| || |||||||| ||||| ||| || Sbjct: 55913 cacattgaggagcagtttggtggtggacgattgcttgcatgcatttcttctcgacct-gg 55971 Query: 590 ccagtgtgggagagctgatgggta 613 || || || |||||||||||||| Sbjct: 55972 tcaatgcggcagagctgatgggta 55995
>ref|NM_125314.2| Arabidopsis thaliana structural constituent of ribosome AT5G59240 mRNA, complete cds Length = 851 Score = 133 bits (67), Expect = 8e-28 Identities = 223/275 (81%) Strand = Plus / Plus Query: 71 tggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagctttcgagc 130 ||||||||||||||||||||||||||||| | || || || ||||||||||| || || Sbjct: 124 tggaggaagaagcgaaagtatgagcttggaagacaaccagctaacactaagctgtcaagt 183 Query: 131 aacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggctctccgt 190 |||||||| ||||||||| ||||||| ||||| || ||||| || ||| | ||| | | Sbjct: 184 aacaagacggtgaggaggatccgtgtgcgtggtgggaatgtaaagtggcgagctttgagg 243 Query: 191 ctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctg 250 || || ||||| |||||||| ||||| ||||| || ||||||||||| | || || Sbjct: 244 ctcgatactggaaacttctcgtggggaagtgaagctgtgacccgcaagactaggatcttg 303 Query: 251 gatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaat 310 ||||||| |||||| | ||||||||||||||||| | || || || |||||||||| | Sbjct: 304 gatgtggcgtacaatgcatcaaacaatgagcttgttcgtacacaaactcttgtgaagagt 363 Query: 311 gccattgtgcaagttgatgctgcccctttcaagca 345 || ||||| |||||||||||||| || |||||||| Sbjct: 364 gctattgttcaagttgatgctgctccattcaagca 398
>gb|BT004603.1| Arabidopsis thaliana At5g59240 gene, complete cds Length = 633 Score = 133 bits (67), Expect = 8e-28 Identities = 223/275 (81%) Strand = Plus / Plus Query: 71 tggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagctttcgagc 130 ||||||||||||||||||||||||||||| | || || || ||||||||||| || || Sbjct: 61 tggaggaagaagcgaaagtatgagcttggaagacaaccagctaacactaagctgtcaagt 120 Query: 131 aacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggctctccgt 190 |||||||| ||||||||| ||||||| ||||| || ||||| || ||| | ||| | | Sbjct: 121 aacaagacggtgaggaggatccgtgtgcgtggtgggaatgtaaagtggcgagctttgagg 180 Query: 191 ctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctg 250 || || ||||| |||||||| ||||| ||||| || ||||||||||| | || || Sbjct: 181 ctcgatactggaaacttctcgtggggaagtgaagctgtgacccgcaagactaggatcttg 240 Query: 251 gatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaat 310 ||||||| |||||| | ||||||||||||||||| | || || || |||||||||| | Sbjct: 241 gatgtggcgtacaatgcatcaaacaatgagcttgttcgtacacaaactcttgtgaagagt 300 Query: 311 gccattgtgcaagttgatgctgcccctttcaagca 345 || ||||| |||||||||||||| || |||||||| Sbjct: 301 gctattgttcaagttgatgctgctccattcaagca 335
>gb|BT013849.1| Lycopersicon esculentum clone 132809F, mRNA sequence Length = 879 Score = 127 bits (64), Expect = 5e-26 Identities = 305/384 (79%), Gaps = 1/384 (0%) Strand = Plus / Plus Query: 7 accatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaa 66 |||||||||||||| || | |||| ||||||||| | || || || ||||| ||| |||| Sbjct: 57 accatgggtatctcacgag-actctatgcacaagaggcgtgctactggtggcaagaagaa 115 Query: 67 ggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagctttc 126 | ||||||||||||||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 116 atcgtggaggaagaagcgaaagtatgaacttggccgccagcctgctaatactaagctctc 175 Query: 127 gagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggctct 186 | ||||||||||| || | ||||||| ||||| |||||||| || |||||||| || Sbjct: 176 aaataacaagacagtcagacgaatccgtgtgcgtggtggtaatgtaaagtggagggcact 235 Query: 187 ccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccgtct 246 | |||| || || || | |||||||||||||||||| || || || || ||| | Sbjct: 236 gagattggatacaggaaattactcatggggtagtgaggcagtcacacgtaaaactcgtat 295 Query: 247 cctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaa 306 ||| ||||||||||||||| | ||||||||||| ||||| | || || || || || || Sbjct: 296 ccttgatgtggtttacaatgcctcaaacaatgaacttgttcgtacacaaacactggtcaa 355 Query: 307 gaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatgg 366 || ||| ||| | |||||||||||||| || || || || |||||||| |||||||| Sbjct: 356 gagtgcaattattcaagttgatgctgcaccatttaaacaatggtacctccagcattatgg 415 Query: 367 agtggaaatcggtaggaagaagaa 390 | || || |||||||||||||| Sbjct: 416 tgctgacattggtaggaagaagaa 439
>gb|DQ200362.1| Solanum tuberosum clone 054E02 unknown mRNA Length = 856 Score = 119 bits (60), Expect = 1e-23 Identities = 304/384 (79%), Gaps = 1/384 (0%) Strand = Plus / Plus Query: 7 accatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaa 66 |||||||||||||| || | |||| ||||||||| | || ||||| ||||| ||| |||| Sbjct: 10 accatgggtatctcacgag-actctatgcacaagaggcgtgccactggtggcaagaagaa 68 Query: 67 ggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacactaagctttc 126 || ||||||||||||||||||||||| ||||||||||||||||| || || ||||| || Sbjct: 69 agcgtggaggaagaagcgaaagtatgaacttggccgccagcctgctaatacaaagctctc 128 Query: 127 gagcaacaagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggctct 186 | ||||||||||| || | | ||||| ||||| |||||||| || |||||||| || Sbjct: 129 aaataacaagacagtcagacgaattcgtgtgcgtggtggtaatgtaaagtggagggcact 188 Query: 187 ccgtctggacactggtaacttctcatggggtagtgaggccacaacccgcaagacccgtct 246 | |||| || || || | |||||||||||||||||| || || || || ||| | Sbjct: 189 gagattggatacaggaaattactcatggggtagtgaggcagtcacacgtaaaactcgtat 248 Query: 247 cctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaa 306 ||| ||||||||||| ||| | ||||||||||| ||||| | || || || || || || Sbjct: 249 ccttgatgtggtttataatgcctcaaacaatgaacttgttcgtacacaaacactggtcaa 308 Query: 307 gaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacctgactcattatgg 366 || ||| ||| | |||||||||||||| || || || || |||||||| |||||||| Sbjct: 309 gagtgcaattattcaagttgatgctgcaccatttaaacaatggtacctccagcattatgg 368 Query: 367 agtggaaatcggtaggaagaagaa 390 | || || |||||||||||||| Sbjct: 369 tgctgacattggtaggaagaagaa 392 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 442 tgctgctgctgccacagaggaagcaaagaagagcaacaaagtccagaggaa 492 ||||||||||||| | |||||| | |||||||||||| | || |||||||| Sbjct: 432 tgctgctgctgccgccgaggaaactaagaagagcaaccatgttcagaggaa 482
>gb|AY086963.1| Arabidopsis thaliana clone 29997 mRNA, complete sequence Length = 895 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 238 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 297 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 298 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 357 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| |||||||||||||||||||| Sbjct: 358 gttcaggttgatgctgctcctttcaagcagtggtacct 395 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 67 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 126 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 127 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 179
>gb|DQ428096.1| Sorghum propinquum locus PRC0162 genomic sequence Length = 796 Score = 111 bits (56), Expect = 3e-21 Identities = 132/156 (84%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 193 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 252 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || |||||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 253 gagcttgatgcacacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 312 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 313 tcccgccct-ggacagtgtggccgagctgatgggta 347
>ref|NM_122036.2| Arabidopsis thaliana structural constituent of ribosome AT5G20290 mRNA, complete cds Length = 934 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 238 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 297 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 298 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 357 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 358 gttcaggttgatgctgctccgttcaagcagtggtacct 395 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 67 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 126 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 127 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 179
>gb|AY091172.1| Arabidopsis thaliana unknown protein (At5g20290) mRNA, complete cds Length = 700 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 187 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 246 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 247 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 306 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 307 gttcaggttgatgctgctccgttcaagcagtggtacct 344 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 16 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 75 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 76 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 128
>gb|AY050937.1| Arabidopsis thaliana unknown protein (At5g20290) mRNA, complete cds Length = 940 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 228 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 287 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 288 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 347 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 348 gttcaggttgatgctgctccgttcaagcagtggtacct 385 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 57 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 116 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 117 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 169
>gb|AY061909.1| Arabidopsis thaliana AT5g20290/F5O24_180 mRNA, complete cds Length = 669 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 187 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 246 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 247 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 306 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 307 gttcaggttgatgctgctccgttcaagcagtggtacct 344 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 16 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 75 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 76 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 128
>gb|AY052338.1| Arabidopsis thaliana AT5g20290/F5O24_180 mRNA, complete cds Length = 895 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 238 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 297 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 298 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 357 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 358 gttcaggttgatgctgctccgttcaagcagtggtacct 395 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 67 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 126 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 127 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 179
>emb|BX829978.1|CNS0A1LR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB51ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 878 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 222 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 281 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 282 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 341 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 342 gttcaggttgatgctgctccgttcaagcagtggtacct 379 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 51 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 110 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 111 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 163
>emb|BX829620.1|CNS0A1JH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 881 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 222 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 281 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 282 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 341 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 342 gttcaggttgatgctgctccgttcaagcagtggtacct 379 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 51 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 110 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 111 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 163
>emb|BX831734.1|CNS0A135 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH26ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 867 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 208 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 267 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 268 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 327 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 328 gttcaggttgatgctgctccgttcaagcagtggtacct 365 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 37 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 96 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | ||||| |||||||| ||||| || ||||||||||| Sbjct: 97 aagtatgagatgggaaggcagccagccaacaccaagctctcaagcaacaagac 149
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 Length = 101458 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||||| || || |||||||||||| | |||| |||||| Sbjct: 56776 actggtaactactcgtggggaagtgaagcaactacccgcaagaccagagtccttgatgtg 56717 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 56716 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 56657 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 56656 gttcaggttgatgctgctccgttcaagcagtggtacct 56619 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Minus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 ||||| || |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 57288 gactctatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 57229 Query: 86 aagt 89 |||| Sbjct: 57228 aagt 57225
>gb|DQ428095.1| Sorghum bicolor voucher PI585454 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428094.1| Sorghum bicolor voucher PI267539 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428093.1| Sorghum bicolor voucher PI267408 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428092.1| Sorghum bicolor voucher PI152702 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428091.1| Sorghum bicolor voucher NSL92371 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428090.1| Sorghum bicolor voucher NSL87666 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428089.1| Sorghum bicolor voucher NSL56174 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428088.1| Sorghum bicolor voucher NSL56003 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428087.1| Sorghum bicolor voucher NSL55243 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428086.1| Sorghum bicolor voucher NSL51365 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428085.1| Sorghum bicolor voucher NSL51030 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>gb|DQ428084.1| Sorghum bicolor voucher NSL50875 locus PRC0162 genomic sequence Length = 797 Score = 103 bits (52), Expect = 7e-19 Identities = 131/156 (83%), Gaps = 1/156 (0%) Strand = Plus / Plus Query: 458 gaggaagcaaagaagagcaacaaagtccagaggaagcttgagaagcgtcagcaggggcgc 517 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||| ||| Sbjct: 197 gaggaagcaaagaagagcaaccatgtgaagaggaagcttgagaagcgtcaggagggacgc 256 Query: 518 actctggactcacacattgaggagcagttcagcggtggaaggttgctggcttgcatttcg 577 || || | |||||||| ||||| || || |||||||||||||||| |||||||| Sbjct: 257 gagcttgatgcgcacattgaagagcaatttggcagtggaaggttgctggcgtgcatttcc 316 Query: 578 tctcgccctgggccagtgtgggagagctgatgggta 613 || |||||| || |||||||| ||||||||||||| Sbjct: 317 tcccgccct-ggacagtgtggccgagctgatgggta 351
>emb|CT009479.4| M.truncatula DNA sequence from clone MTH2-164E3 on chromosome 3, complete sequence Length = 133351 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 252 atgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatg 311 |||||||||||||| | || ||||||||||||||| | |||||||| ||||| |||| || Sbjct: 5358 atgtggtttacaatgcttccaacaatgagcttgtgcgaactcagactcttgtaaagagtg 5299 Query: 312 ccattgtgcaagttgatgctgcccctttcaagcagtggtacct 354 | |||||||| |||||||| || || ||||||||||||||||| Sbjct: 5298 ctattgtgcaggttgatgccgctccattcaagcagtggtacct 5256 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 533 attgaggagcagttcagcggtggaaggttgctggcttgcatttcgtctcgccctgg 588 ||||| |||||||| | |||||| | ||||| ||||||||||| ||||| ||||| Sbjct: 398 attgaagagcagttgggtggtggacgattgcttgcttgcatttcttctcgacctgg 343
>emb|BX829884.1|CNS0A1CS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 881 Score = 99.6 bits (50), Expect = 1e-17 Identities = 131/158 (82%) Strand = Plus / Plus Query: 197 actggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtg 256 |||||||||| ||| ||||| ||| | || || |||||||||||| | |||| |||||| Sbjct: 222 actggtaactactcgtggggaagtcaagcaactacccgcaagaccagagtccttgatgtg 281 Query: 257 gtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccatt 316 || |||||| | || |||||||||||||| | ||| |||| ||||| |||| ||| ||| Sbjct: 282 gtctacaatgcctccaacaatgagcttgtacgtactaagacacttgtcaagagtgctatt 341 Query: 317 gtgcaagttgatgctgcccctttcaagcagtggtacct 354 || || ||||||||||| || ||||||||||||||||| Sbjct: 342 gttcaggttgatgctgctccgttcaagcagtggtacct 379 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 59 aagcagaaggcatggaggaagaagcgaaagtatgagcttggccgccagcctgccaacact 118 ||||||||| ||||||||||||||||||||||||| | || | ||||| |||||||| Sbjct: 84 aagcagaagcaatggaggaagaagcgaaagtatgagatgggaaggcagccagccaacacc 143 Query: 119 aagctttcgagcaacaagac 138 ||||| || ||||||||||| Sbjct: 144 aagctctcaagcaacaagac 163
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 99.6 bits (50), Expect = 1e-17 Identities = 206/258 (79%) Strand = Plus / Minus Query: 88 gtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagacagtgaggag 147 |||||||||||| | || || || ||||||||||| || || |||||||| |||||||| Sbjct: 42554 gtatgagcttggaagacaaccagctaacactaagctgtcaagtaacaagacggtgaggag 42495 Query: 148 ggtccgtgttcgtggaggtaatgtgaaatggagggctctccgtctggacactggtaactt 207 | ||||||| ||||| || ||||| || ||| | ||| | | || || ||||| ||||| Sbjct: 42494 gatccgtgtgcgtggtgggaatgtaaagtggcgagctttgaggctcgatactggaaactt 42435 Query: 208 ctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattc 267 ||| ||||| ||||| || ||||||||||| | || ||||||||| |||||| | Sbjct: 42434 ctcgtggggaagtgaagctgtgacccgcaagactaggatcttggatgtggcgtacaatgc 42375 Query: 268 gtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttga 327 ||||||||||||||||| | || || || |||||||||| ||| ||||| |||||||| Sbjct: 42374 atcaaacaatgagcttgttcgtacacaaactcttgtgaagagtgctattgttcaagttga 42315 Query: 328 tgctgcccctttcaagca 345 |||||| || |||||||| Sbjct: 42314 tgctgctccattcaagca 42297 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tggaggaagaagcgaaagta 90 |||||||||||||||||||| Sbjct: 42755 tggaggaagaagcgaaagta 42736
>gb|DQ226772.1| Boechera divaricarpa isolate SLW-D-F05 mRNA sequence Length = 267 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 26 gactccatgcacaagcgccgggccaccggtgggaagcagaaggcatggaggaagaagcga 85 |||||||| |||||| | || ||||| || || ||||||||| |||||||||||||||| Sbjct: 4 gactccatccacaagaggcgtgccactggaggcaagcagaagcaatggaggaagaagcga 63 Query: 86 aagtatgagcttggccgccagcctgccaacactaagctttcgagcaacaagac 138 ||||||||| | || | |||||||||||||| ||||| || ||||||||||| Sbjct: 64 aagtatgagatgggaaggcagcctgccaacaccaagctctcaagcaacaagac 116
>emb|BX830341.1|CNS0A1HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 198 ctggtaacttctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtgg 257 ||||||||| ||| ||||| ||| | || || |||||||||||| | |||| ||||||| Sbjct: 1 ctggtaactactcgtggggaagttaagcaactacccgcaagaccagagtccttgatgtgg 60 Query: 258 tttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccattg 317 | || ||| | || ||||||||||||| | ||| |||| |||||||||| ||| |||| Sbjct: 61 tctaaaatgcctcccacaatgagcttgtacgtactaagacacttgtgaagagtgctattg 120 Query: 318 tgcaagttgatgctgcccctttcaagcagtggtacct 354 | || ||||||||||| || ||||||||||||||||| Sbjct: 121 ttcaggttgatgctgcgccgttcaagcagtggtacct 157
>gb|BT013650.1| Lycopersicon esculentum clone 132457R, mRNA sequence Length = 970 Score = 79.8 bits (40), Expect = 1e-11 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 7 accatgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaa 66 |||||||||||||| || ||| || ||||||||| | || ||||| || || ||| |||| Sbjct: 69 accatgggtatctctcg-ggattcgatgcacaagagacgtgccactggaggcaagaagaa 127 Query: 67 ggcatggaggaagaagcgaaagtatgag 94 |||||||||||||||||||||||||||| Sbjct: 128 ggcatggaggaagaagcgaaagtatgag 155 Score = 48.1 bits (24), Expect = 0.034 Identities = 93/116 (80%) Strand = Plus / Plus Query: 236 aagacccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcag 295 ||||||||| | ||||||| || |||||| | |||||||| ||| | || || || || Sbjct: 300 aagacccgtttattggatgttgtctacaatgcctcaaacaacgagttggttagaacacaa 359 Query: 296 acccttgtgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggta 351 || || ||||||| ||| ||||||||||||||||| || || || || |||||||| Sbjct: 360 actctagtgaagagtgctattgtgcaagttgatgcagctccatttaaacagtggta 415
>emb|AJ538848.1|NTA538848 Nicotiana tabacum cDNA-AFLP-fragment BT2-M12-050 Length = 202 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Plus Query: 152 cgtgttcgtggaggtaatgtgaaatggagggctctccgtctggacactggtaacttctca 211 ||||| ||||| || ||||||||||||||||| || | |||| || || || | |||| Sbjct: 13 cgtgtgcgtggtggcaatgtgaaatggagggcgctaagattggatacaggaaattactca 72 Query: 212 tggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattcgtca 271 |||||||||||||| || |||||||| ||| |||| |||||||| |||||| | ||| Sbjct: 73 tggggtagtgaggcagtcacacgcaagactcgtatccttgatgtggtctacaatgcctca 132 Query: 272 aacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttgatgct 331 |||||||| ||||| | || || || || || |||| ||| ||||| |||||||||||| Sbjct: 133 aacaatgaacttgttcgcacacaaactctggtcaagagtgctattgttcaagttgatgct 192 Query: 332 gc 333 || Sbjct: 193 gc 194
>emb|AJ538847.1|NTA538847 Nicotiana tabacum cDNA-AFLP-fragment BT2-M12-037 Length = 202 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Plus Query: 152 cgtgttcgtggaggtaatgtgaaatggagggctctccgtctggacactggtaacttctca 211 ||||| ||||| || ||||||||||||||||| || | |||| || || || | |||| Sbjct: 13 cgtgtgcgtggtggcaatgtgaaatggagggcgctaagattggatacaggaaattactca 72 Query: 212 tggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattcgtca 271 |||||||||||||| || |||||||| ||| |||| |||||||| |||||| | ||| Sbjct: 73 tggggtagtgaggcagtcacacgcaagactcgtatccttgatgtggtctacaatgcctca 132 Query: 272 aacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttgatgct 331 |||||||| ||||| | || || || || || |||| ||| ||||| |||||||||||| Sbjct: 133 aacaatgaacttgttcgcacacaaactctggtcaagagtgctattgttcaagttgatgct 192 Query: 332 gc 333 || Sbjct: 193 gc 194
>emb|AJ718030.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT23-3-250, cultivar Bright Yellow 2 Length = 209 Score = 67.9 bits (34), Expect = 4e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 208 ctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattc 267 |||||||||||||||||| || |||||||| ||| |||| |||||||| |||||| | Sbjct: 80 ctcatggggtagtgaggcagtcacacgcaagactcgtatccttgatgtggtctacaatgc 139 Query: 268 gtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttga 327 ||||||||||| ||||| | || || || || || |||| ||| ||||| |||||||| Sbjct: 140 ctcaaacaatgaacttgttcgcacacaaactctggtcaagagtgctattgttcaagttga 199 Query: 328 tgctgc 333 |||||| Sbjct: 200 tgctgc 205
>emb|AJ717961.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT2-33-255, cultivar Bright Yellow 2 Length = 211 Score = 67.9 bits (34), Expect = 4e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 208 ctcatggggtagtgaggccacaacccgcaagacccgtctcctggatgtggtttacaattc 267 |||||||||||||||||| || |||||||| ||| |||| |||||||| |||||| | Sbjct: 82 ctcatggggtagtgaggcagtcacacgcaagactcgtatccttgatgtggtctacaatgc 141 Query: 268 gtcaaacaatgagcttgtgaggactcagacccttgtgaagaatgccattgtgcaagttga 327 ||||||||||| ||||| | || || || || || |||| ||| ||||| |||||||| Sbjct: 142 ctcaaacaatgaacttgttcgcacacaaactctggtcaagagtgctattgttcaagttga 201 Query: 328 tgctgc 333 |||||| Sbjct: 202 tgctgc 207
>gb|DQ268855.1| Solanum tuberosum clone 172G07 putative 40S ribosomal protein S8-like protein mRNA, complete cds Length = 932 Score = 67.9 bits (34), Expect = 4e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 9 catgggtatctcgcgtggactccatgcacaagcgccgggccaccggtgggaagcagaagg 68 |||||||||||| || ||| || ||||||||| | || ||||| || || ||| ||||| Sbjct: 10 catgggtatctctcg-ggattcgatgcacaagagacgtgccactggaggcaagaagaagt 68 Query: 69 catggaggaagaagcgaaagtatgag 94 |||||||||||||||||||||||||| Sbjct: 69 catggaggaagaagcgaaagtatgag 94 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 236 aagacccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcag 295 ||||||||| | |||||||||| ||||| | |||||||||||| | || || || || Sbjct: 239 aagacccgtttattggatgtggtctacaacgcctcaaacaatgagttggttagaacacaa 298 Query: 296 acccttgtgaagaatgccattgtgcaagttgatgctgcccctttcaagcagtggta 351 || || ||||||| ||| ||||||||||||||||| || || || ||||||||||| Sbjct: 299 actctagtgaagagtgctattgtgcaagttgatgcagctccatttaagcagtggta 354
>gb|AF078069.1|AF078069 Griffithsia japonica 40S ribosomal protein S8 mRNA, complete cds Length = 777 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagcttggccgccagcctgcca 113 ||||||||||||||||| |||||||||||||| |||| Sbjct: 112 aagaagcgaaagtatgaacttggccgccagcccgcca 148
>ref|NM_214793.1| Danio rerio ribosomal protein S8 (rps8), mRNA Length = 698 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 230 acccgcaagacccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgagg 289 |||||||||||| | || | |||||||| |||||| | |||||||||||||| ||||| Sbjct: 240 acccgcaagaccaggatcattgatgtggtctacaatgcttcaaacaatgagctggtgaga 299 Query: 290 actcagacccttgtgaagaa 309 || ||||||| |||||||| Sbjct: 300 accaagaccctggtgaagaa 319
>gb|AY561509.1| Danio rerio ribosomal protein S8 (rps8) mRNA, complete cds Length = 698 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 230 acccgcaagacccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgagg 289 |||||||||||| | || | |||||||| |||||| | |||||||||||||| ||||| Sbjct: 240 acccgcaagaccaggatcattgatgtggtctacaatgcttcaaacaatgagctggtgaga 299 Query: 290 actcagacccttgtgaagaa 309 || ||||||| |||||||| Sbjct: 300 accaagaccctggtgaagaa 319
>ref|XM_766422.1| Giardia lamblia ATCC 50803 40S ribosomal protein S8 (GLP_163_70585_70061) partial mRNA Length = 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagcttggccgccagcctgccaacactaagctt 124 |||||||| |||||| | |||||||||||||| || |||||||||||| Sbjct: 67 aagaagcgcaagtataatcttggccgccagccagcgaacactaagctt 114
>gb|BC076163.1| Danio rerio ribosomal protein S8, mRNA (cDNA clone MGC:92679 IMAGE:7073896), complete cds Length = 714 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 230 acccgcaagacccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgagg 289 |||||||||||| | || | |||||||| |||||| | |||||||||||||| ||||| Sbjct: 240 acccgcaagaccaggatcattgatgtggtctacaatgcttcaaacaatgagctggtgaga 299 Query: 290 actcagacccttgtgaagaa 309 || ||||||| |||||||| Sbjct: 300 accaagaccctggtgaagaa 319
>emb|BX569796.6| Zebrafish DNA sequence from clone CH211-106K21 in linkage group 2, complete sequence Length = 109947 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 230 acccgcaagacccgtctcctggatgtggtttacaattcgtcaaacaatgagcttgtgagg 289 |||||||||||| | || | |||||||| |||||| | |||||||||||||| ||||| Sbjct: 28021 acccgcaagaccaggatcattgatgtggtctacaatgcttcaaacaatgagctggtgaga 28080 Query: 290 actcagacccttgtgaagaa 309 || ||||||| |||||||| Sbjct: 28081 accaagaccctggtgaagaa 28100
>ref|NM_001016566.2| Xenopus tropicalis hypothetical protein LOC549320 (LOC549320), mRNA Length = 697 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 gatgtggtttacaattcgtcaaacaatgagct 282 |||||||| |||||| |||||||||||||||| Sbjct: 241 gatgtggtgtacaatgcgtcaaacaatgagct 272
>ref|NM_028101.1| Mus musculus RIKEN cDNA 2610003J06 gene (2610003J06Rik), mRNA Length = 2012 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 933 ggctgaggttgctgctgctgccac 910
>ref|NM_019719.2| Mus musculus STIP1 homology and U-Box containing protein 1 (Stub1), mRNA Length = 1700 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1621 ggctgaggttgctgctgctgccac 1644
>emb|CT025346.2| Xenopus tropicalis finished cDNA, clone TNeu112e22 Length = 692 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 gatgtggtttacaattcgtcaaacaatgagct 282 |||||||| |||||| |||||||||||||||| Sbjct: 244 gatgtggtgtacaatgcgtcaaacaatgagct 275
>gb|AY169788.1| Mus musculus doublesex and mab-3 related transcription factor 1b (Dmrt1b) mRNA, complete cds Length = 985 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 906 ggctgaggttgctgctgctgccac 929
>gb|BC038939.1| Mus musculus STIP1 homology and U-Box containing protein 1, mRNA (cDNA clone MGC:46850 IMAGE:2598940), complete cds Length = 1295 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1210 ggctgaggttgctgctgctgccac 1233
>gb|BC010800.1| Mus musculus RIKEN cDNA 2610003J06 gene, mRNA (cDNA clone MGC:18872 IMAGE:4235072), complete cds Length = 1994 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 898 ggctgaggttgctgctgctgccac 875
>gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome 17, complete sequence Length = 231245 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 202681 ggctgaggttgctgctgctgccac 202704
>gb|DQ122869.1| Chlamydomonas incerta 40S ribosomal protein S8 mRNA, complete cds Length = 744 Score = 48.1 bits (24), Expect = 0.034 Identities = 87/108 (80%) Strand = Plus / Plus Query: 246 tcctggatgtggtttacaattcgtcaaacaatgagcttgtgaggactcagacccttgtga 305 ||||||||||||| ||||| |||| ||||| ||||| ||| | || ||||| || |||| Sbjct: 254 tcctggatgtggtctacaacgcgtccaacaacgagctggtgcgcacccagacgctggtga 313 Query: 306 agaatgccattgtgcaagttgatgctgcccctttcaagcagtggtacc 353 |||| ||||| || || || || || | || |||||||||||||||| Sbjct: 314 agaacgccatcgtccaggtggacgccacgcccttcaagcagtggtacc 361
>dbj|AK148079.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370012H03 product:hypothetical protein, full insert sequence Length = 1993 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 914 ggctgaggttgctgctgctgccac 891
>dbj|AK155810.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730225A03 product:similar to C. Elegans protein F17C8.5 [Homo sapiens], full insert sequence Length = 2017 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 938 ggctgaggttgctgctgctgccac 915
>dbj|AK166630.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0042H15 product:STIP1 homology and U-Box containing protein 1, full insert sequence Length = 1234 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1187 ggctgaggttgctgctgctgccac 1210
>dbj|AK158595.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230019N20 product:STIP1 homology and U-Box containing protein 1, full insert sequence Length = 1257 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1205 ggctgaggttgctgctgctgccac 1228
>dbj|AK172073.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830034L21 product:hypothetical protein, full insert sequence Length = 2012 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 933 ggctgaggttgctgctgctgccac 910
>dbj|AK002752.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610033N24 product:STIP1 homology and U-Box containing protein 1, full insert sequence Length = 1227 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1178 ggctgaggttgctgctgctgccac 1201
>dbj|AK008742.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210017D18 product:STIP1 homology and U-Box containing protein 1, full insert sequence Length = 1166 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1119 ggctgaggttgctgctgctgccac 1142
>dbj|AK045776.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230310J16 product:STIP1 homology and U-Box containing protein 1, full insert sequence Length = 1352 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1170 ggctgaggttgctgctgctgccac 1193
>dbj|AK004464.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1190003C14 product:STIP1 homology and U-Box containing protein 1, full insert sequence Length = 1219 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1169 ggctgaggttgctgctgctgccac 1192
>dbj|AK011308.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610003J06 product:hypothetical protein, full insert sequence Length = 2012 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 933 ggctgaggttgctgctgctgccac 910
>dbj|AK210902.1| Mus musculus cDNA, clone:Y2G0120A08, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044911, based on BLAT search Length = 385 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 306 ggctgaggttgctgctgctgccac 329
>dbj|AK210901.1| Mus musculus cDNA, clone:Y2G0120A07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044911, based on BLAT search Length = 388 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 309 ggctgaggttgctgctgctgccac 332
>dbj|AK208375.1| Mus musculus cDNA, clone:Y2G0110P10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044911, based on BLAT search Length = 271 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 208 ggctgaggttgctgctgctgccac 231
>dbj|AK207959.1| Mus musculus cDNA, clone:Y2G0109K18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044911, based on BLAT search Length = 369 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 297 ggctgaggttgctgctgctgccac 320
>dbj|AK206276.1| Mus musculus cDNA, clone:Y2G0104F05, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044911, based on BLAT search Length = 344 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 281 ggctgaggttgctgctgctgccac 304
>gb|BC027427.1| Mus musculus STIP1 homology and U-Box containing protein 1, mRNA (cDNA clone MGC:35920 IMAGE:4191866), complete cds Length = 1700 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1621 ggctgaggttgctgctgctgccac 1644
>gb|AF129086.1|AF129086 Mus musculus carboxy terminus of Hsp70-interacting protein (Chip) mRNA, complete cds Length = 1218 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ggctgaggttgctgctgctgccac 456 |||||||||||||||||||||||| Sbjct: 1168 ggctgaggttgctgctgctgccac 1191
>emb|CR760677.2| Xenopus tropicalis finished cDNA, clone TEgg072p10 Length = 697 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 gatgtggtttacaattcgtcaaacaatgagct 282 |||||||| |||||| |||||||||||||||| Sbjct: 241 gatgtggtgtacaatgcgtcaaacaatgagct 272
>gb|AY389954.1| Protopterus dolloi ribosomal protein S8 mRNA, partial cds Length = 571 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 251 gatgtggtttacaattcgtcaaacaatgagcttgt 285 ||||| ||||||||| | ||||||||||||||||| Sbjct: 212 gatgtagtttacaatgcctcaaacaatgagcttgt 246
>gb|AC154316.3| Mus musculus BAC clone RP23-338D3 from chromosome 14, complete sequence Length = 210286 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 agcaacaaagtccagaggaagc 494 |||||||||||||||||||||| Sbjct: 50782 agcaacaaagtccagaggaagc 50803
>ref|XM_681438.1| PREDICTED: Danio rerio zgc:112361 (zgc:112361), mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 aacaatgagcttgtgaggactcagacccttgtgaagaa 309 ||||||||||||||||| || ||||||| |||||||| Sbjct: 340 aacaatgagcttgtgagaaccaagaccctggtgaagaa 377
>gb|BC095780.1| Danio rerio zgc:112361, mRNA (cDNA clone MGC:112361 IMAGE:7288970), complete cds Length = 1579 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 aacaatgagcttgtgaggactcagacccttgtgaagaa 309 ||||||||||||||||| || ||||||| |||||||| Sbjct: 287 aacaatgagcttgtgagaaccaagaccctggtgaagaa 324
>dbj|AP004965.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20J05, TM0143b, complete sequence Length = 83991 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 128 agcaacaagacagtgaggagggtccgtgtt 157 |||||||||||||| ||||||||| ||||| Sbjct: 32161 agcaacaagacagtaaggagggtctgtgtt 32132
>ref|XM_465186.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 429 aagaggctgaggttgctgctgctgc 453 |||||||||||||| |||||||||| Sbjct: 134 aagaggctgaggttactgctgctgc 158
>gb|AY769322.1| Bombyx mori ribosomal protein S8 (RpS8) mRNA, complete cds Length = 698 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 188 cgtctggacactggtaacttctcatgggg 216 ||||||||||| ||||||||||| ||||| Sbjct: 193 cgtctggacaccggtaacttctcttgggg 221
>gb|AC092198.5| Homo sapiens chromosome X clone XXbac-10326 map p11.4, complete sequence Length = 158456 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 gccgctgccaaaaaggatgct 418 ||||||||||||||||||||| Sbjct: 83770 gccgctgccaaaaaggatgct 83790
>ref|XM_957192.1| Neurospora crassa OR74A hypothetical protein (NCU07699.1) partial mRNA Length = 2214 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 agcttgagaagcgtcagcagg 512 ||||||||||||||||||||| Sbjct: 1247 agcttgagaagcgtcagcagg 1267
>ref|XM_328404.1| Neurospora crassa OR74A hypothetical protein (NCU07699.1) partial mRNA Length = 2214 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 agcttgagaagcgtcagcagg 512 ||||||||||||||||||||| Sbjct: 1247 agcttgagaagcgtcagcagg 1267
>ref|NM_001025317.1| Bos taurus ribosomal protein S8 (RPS8), mRNA Length = 689 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagcttggccgccagcctgccaacac 117 |||||||||||||||||||| || |||| |||||||||| Sbjct: 74 aagaagcgaaagtatgagctgggacgccccgctgccaacac 114
>emb|AL391561.20| Human DNA sequence from clone RP11-99P18 on chromosome 1 Contains part of the FRAP1 gene for FK506 binding protein 12-rapamycin associated protein 1, a novel gene and the 5' end of the gene for angiopoietin-like factor (CDT6), complete sequence Length = 75525 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 cagaaggcatggaggaagaag 82 ||||||||||||||||||||| Sbjct: 59469 cagaaggcatggaggaagaag 59449
>gb|AC156546.7| Mus musculus chromosome 18, clone RP23-131O22, complete sequence Length = 209678 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 gaagcagaaggcatggaggaa 78 ||||||||||||||||||||| Sbjct: 89744 gaagcagaaggcatggaggaa 89724
>emb|AJ300188.1|HSA300188 Homo sapiens MASP-2 gene (partial), PM-scl gene, FRAP2 gene and CDT6 gene, clone RPCI.11-99P18 Length = 148049 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 cagaaggcatggaggaagaag 82 ||||||||||||||||||||| Sbjct: 122375 cagaaggcatggaggaagaag 122355
>dbj|AK123758.1| Homo sapiens cDNA FLJ41764 fis, clone IMR322005833 Length = 2691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 gccgctgccaaaaaggatgct 418 ||||||||||||||||||||| Sbjct: 2121 gccgctgccaaaaaggatgct 2141
>gb|BC102608.1| Bos taurus ribosomal protein S8, mRNA (cDNA clone MGC:127751 IMAGE:30957337), complete cds Length = 720 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagcttggccgccagcctgccaacac 117 |||||||||||||||||||| || |||| |||||||||| Sbjct: 89 aagaagcgaaagtatgagctgggacgccccgctgccaacac 129
>gb|AC167287.2| Pan troglodytes chromosome X clone RP43-056J23 map human ortholog p11.4, complete sequence Length = 164383 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 gccgctgccaaaaaggatgct 418 ||||||||||||||||||||| Sbjct: 146746 gccgctgccaaaaaggatgct 146766
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 gaaagctgctgccgctgccaa 408 ||||||||||||||||||||| Sbjct: 4474585 gaaagctgctgccgctgccaa 4474565
>gb|AC018891.9| Homo sapiens BAC clone RP11-498M11 from 2, complete sequence Length = 174074 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 agaggaagcaaagaagagcaa 477 ||||||||||||||||||||| Sbjct: 103503 agaggaagcaaagaagagcaa 103483
>gb|AY911334.1| Bos taurus clone IMAGE:7961473 ribosomal protein S8 mRNA, complete cds Length = 706 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagcttggccgccagcctgccaacac 117 |||||||||||||||||||| || |||| |||||||||| Sbjct: 91 aagaagcgaaagtatgagctgggacgccccgctgccaacac 131
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 429 aagaggctgaggttgctgctgctgc 453 |||||||||||||| |||||||||| Sbjct: 110981 aagaggctgaggttactgctgctgc 110957
>gb|BT021062.1| Bos taurus ribosomal protein S8 (RPS8), mRNA, complete cds Length = 689 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagcttggccgccagcctgccaacac 117 |||||||||||||||||||| || |||| |||||||||| Sbjct: 74 aagaagcgaaagtatgagctgggacgccccgctgccaacac 114
>dbj|AB098931.1| Bos taurus mRNA for similar to ribosomal protein S8, partial cds, clone: ORCS10590 Length = 538 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagcttggccgccagcctgccaacac 117 |||||||||||||||||||| || |||| |||||||||| Sbjct: 77 aagaagcgaaagtatgagctgggacgccccgctgccaacac 117
>gb|L16767.1|TOBNTRANA Nicotiana tabacum GTP-binding protein (Ran-A1) mRNA, complete cds Length = 1039 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 431 gaggctgaggttgctgctgctgcca 455 ||||||||| ||||||||||||||| Sbjct: 691 gaggctgagcttgctgctgctgcca 715
>emb|AL929408.3| Mouse DNA sequence from clone RP23-456B2 on chromosome 4, complete sequence Length = 196915 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 gaagcagaaggcatggaggaa 78 ||||||||||||||||||||| Sbjct: 139755 gaagcagaaggcatggaggaa 139735
>gb|BC086899.1| Mus musculus ribosomal protein S8, mRNA (cDNA clone MGC:107577 IMAGE:6748012), complete cds Length = 709 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 90 aagaagcgaaagtatgagct 109
>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence Length = 193364 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 agtccagaggaagcttgaga 500 |||||||||||||||||||| Sbjct: 182688 agtccagaggaagcttgaga 182707
>ref|XM_523929.1| PREDICTED: Pan troglodytes similar to ribosomal protein S8 (LOC468540), mRNA Length = 1032 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 67 aagaagcgaaagtatgagct 86
>gb|AC109272.20| Mus musculus chromosome 7, clone RP23-354L18, complete sequence Length = 202993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 agtgtgggagagctgatggg 611 |||||||||||||||||||| Sbjct: 100351 agtgtgggagagctgatggg 100332
>ref|NM_053888.1| Rattus norvegicus myelin transcription factor 1-like (Myt1l), mRNA Length = 4491 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 2892 gctgaggttgctgctgctgc 2873
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gaagaagaaagctgctgccg 401 |||||||||||||||||||| Sbjct: 4964322 gaagaagaaagctgctgccg 4964303
>gb|BC081465.1| Mus musculus ribosomal protein S8, mRNA (cDNA clone MGC:102172 IMAGE:6823252), complete cds Length = 706 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 70 aagaagcgaaagtatgagct 89
>gb|BC079586.1| Mus musculus zinc finger protein 423, mRNA (cDNA clone IMAGE:5706800) Length = 4609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ctgctgctgccacagaggaa 463 |||||||||||||||||||| Sbjct: 146 ctgctgctgccacagaggaa 127
>gb|AC009341.7| Drosophila melanogaster clone BACR07G13, complete sequence Length = 183723 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 gttgctgctgctgccacaga 459 |||||||||||||||||||| Sbjct: 123052 gttgctgctgctgccacaga 123071
>gb|AC107764.11| Mus musculus chromosome 15, clone RP23-179A6, complete sequence Length = 196178 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 cacagaggaagcaaagaaga 473 |||||||||||||||||||| Sbjct: 181470 cacagaggaagcaaagaaga 181489
>gb|BC051446.1| Mus musculus ribosomal protein S8, mRNA (cDNA clone MGC:60694 IMAGE:30054488), complete cds Length = 730 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 87 aagaagcgaaagtatgagct 106
>gb|AC113438.17| Mus musculus chromosome 6, clone RP23-191I2, complete sequence Length = 221969 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 45555 aagaagcgaaagtatgagct 45536
>ref|NM_009098.2| Mus musculus ribosomal protein S8 (Rps8), mRNA Length = 740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 138 aagaagcgaaagtatgagct 157
>gb|AC134540.3| Mus musculus BAC clone RP24-400M10 from chromosome 18, complete sequence Length = 189505 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 aagcagaaggcatggaggaa 78 |||||||||||||||||||| Sbjct: 38844 aagcagaaggcatggaggaa 38863
>gb|BC059234.1| Mus musculus zinc finger protein 423, mRNA (cDNA clone IMAGE:6409153), partial cds Length = 4748 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ctgctgctgccacagaggaa 463 |||||||||||||||||||| Sbjct: 271 ctgctgctgccacagaggaa 252
>gb|AY256893.1| Mus musculus early B-cell factor-associated zinc finger protein (Ebfaz) mRNA, complete cds, alternatively spliced Length = 4805 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ctgctgctgccacagaggaa 463 |||||||||||||||||||| Sbjct: 359 ctgctgctgccacagaggaa 340
>ref|XR_003870.1| PREDICTED: Mus musculus hypothetical LOC433515 (LOC433515), mRNA Length = 702 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 104 aagaagcgaaagtatgagct 123
>gb|BC100594.1| Mus musculus ribosomal protein S8, mRNA (cDNA clone MGC:118705 IMAGE:6750930), complete cds Length = 710 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 90 aagaagcgaaagtatgagct 109
>ref|XR_002737.1| PREDICTED: Mus musculus similar to ribosomal protein S8 (LOC435556), mRNA Length = 710 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 98 aagaagcgaaagtatgagct 117
>gb|AC132110.2| Mus musculus BAC clone RP24-188M9 from chromosome 18, complete sequence Length = 189130 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 aagcagaaggcatggaggaa 78 |||||||||||||||||||| Sbjct: 6450 aagcagaaggcatggaggaa 6431
>ref|XR_002562.1| PREDICTED: Mus musculus similar to ribosomal protein S8 (LOC669528), mRNA Length = 757 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 123 aagaagcgaaagtatgagct 142
>ref|XM_284504.5| PREDICTED: Mus musculus similar to ribosomal protein S8, transcript variant 1 (LOC330948), mRNA Length = 755 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 123 aagaagcgaaagtatgagct 142
>ref|XM_896497.2| PREDICTED: Mus musculus similar to ribosomal protein S8, transcript variant 2 (LOC330948), mRNA Length = 718 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 86 aagaagcgaaagtatgagct 105
>ref|XM_917482.2| PREDICTED: Mus musculus similar to ribosomal protein S8, transcript variant 1 (LOC638503), mRNA Length = 755 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 123 aagaagcgaaagtatgagct 142
>ref|XM_924969.2| PREDICTED: Mus musculus similar to ribosomal protein S8, transcript variant 2 (LOC638503), mRNA Length = 718 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 86 aagaagcgaaagtatgagct 105
>ref|XM_001000788.1| PREDICTED: Mus musculus zinc finger protein 423, transcript variant 2 (Zfp423), mRNA Length = 4569 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ctgctgctgccacagaggaa 463 |||||||||||||||||||| Sbjct: 123 ctgctgctgccacagaggaa 104
>ref|XR_003358.1| PREDICTED: Mus musculus similar to ribosomal protein S8 (LOC639871), mRNA Length = 659 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 75 aagaagcgaaagtatgagct 94
>ref|XM_974176.1| PREDICTED: Mus musculus similar to ribosomal protein S8 (LOC665048), mRNA Length = 1341 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 700 aagaagcgaaagtatgagct 719
>ref|XM_974025.1| PREDICTED: Mus musculus similar to ribosomal protein S8 (LOC665018), mRNA Length = 903 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 262 aagaagcgaaagtatgagct 281
>ref|XM_973990.1| PREDICTED: Mus musculus similar to ribosomal protein S8 (LOC665010), mRNA Length = 903 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 262 aagaagcgaaagtatgagct 281
>ref|XR_002682.1| PREDICTED: Mus musculus similar to ribosomal protein S8 (LOC638636), mRNA Length = 655 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 25 aagaagcgaaagtatgagct 44
>ref|XR_003236.1| PREDICTED: Mus musculus similar to ribosomal protein S8 (LOC636831), mRNA Length = 711 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 16 aagaagcgaaagtatgagct 35
>gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, complete sequence Length = 178898 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 agaggctgaggttgctgctgctgc 453 ||||||||| |||||||||||||| Sbjct: 55746 agaggctgatgttgctgctgctgc 55723
>gb|AC124444.4| Mus musculus BAC clone RP24-185P7 from chromosome 7, complete sequence Length = 184996 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gaagcagaaggcatggagga 77 |||||||||||||||||||| Sbjct: 27740 gaagcagaaggcatggagga 27721
>gb|AC122929.4| Mus musculus BAC clone RP23-12A18 from chromosome 6, complete sequence Length = 252503 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 12962 aagaagcgaaagtatgagct 12981
>gb|AC125321.4| Mus musculus BAC clone RP23-371B13 from chromosome 9, complete sequence Length = 196150 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 ctgctgccacagaggaagca 466 |||||||||||||||||||| Sbjct: 155414 ctgctgccacagaggaagca 155433 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 32206 aagaagcgaaagtatgagct 32225
>gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, complete sequence Length = 233077 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 44572 aagaagcgaaagtatgagct 44553
>gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome 9, complete sequence Length = 158058 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 13611 aagaagcgaaagtatgagct 13592
>gb|AC121809.3| Mus musculus BAC clone RP23-451B23 from chromosome 8, complete sequence Length = 192626 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ctgctgctgccacagaggaa 463 |||||||||||||||||||| Sbjct: 44971 ctgctgctgccacagaggaa 44952
>gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-132J21, complete sequence Length = 200910 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 ggttgctgctgctgccacag 458 |||||||||||||||||||| Sbjct: 69672 ggttgctgctgctgccacag 69691
>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence Length = 202155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 cacagaggaagcaaagaaga 473 |||||||||||||||||||| Sbjct: 201375 cacagaggaagcaaagaaga 201356
>ref|XM_852752.1| PREDICTED: Canis familiaris similar to gamma-aminobutyric acid (GABA) A receptor, delta, transcript variant 3 (LOC489609), mRNA Length = 1815 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 tgtgaagaatgccattgtgc 320 |||||||||||||||||||| Sbjct: 1101 tgtgaagaatgccattgtgc 1120
>ref|XM_546729.2| PREDICTED: Canis familiaris similar to gamma-aminobutyric acid (GABA) A receptor, delta, transcript variant 1 (LOC489609), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 tgtgaagaatgccattgtgc 320 |||||||||||||||||||| Sbjct: 1005 tgtgaagaatgccattgtgc 1024
>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence Length = 215781 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 45498 aagaagcgaaagtatgagct 45517
>gb|AC005100.2| Homo sapiens BAC clone CTA-351O6 from 7, complete sequence Length = 139820 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 430 agaggctgaggttgctgctgctgc 453 ||||||||| |||||||||||||| Sbjct: 126435 agaggctgatgttgctgctgctgc 126458
>gb|AC109261.7| Mus musculus chromosome 17, clone RP23-23D19, complete sequence Length = 227994 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 gccctgggccagtgtgggag 601 |||||||||||||||||||| Sbjct: 35808 gccctgggccagtgtgggag 35827
>gb|AC163211.5| Mus musculus chromosome 7, clone RP24-341C24, complete sequence Length = 148004 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 100873 aagaagcgaaagtatgagct 100892
>gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosome 12, complete sequence Length = 157411 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 133723 gctgaggttgctgctgctgc 133742
>ref|NM_008666.1| Mus musculus myelin transcription factor 1-like (Myt1l), mRNA Length = 4532 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 2831 gctgaggttgctgctgctgc 2812
>gb|AC008155.10| Homo sapiens chromosome 7 clone RP11-289F17, complete sequence Length = 176181 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 cttgagaagcgtcagcaggg 513 |||||||||||||||||||| Sbjct: 58387 cttgagaagcgtcagcaggg 58368
>gb|AC025593.6| Homo sapiens chromosome 7 clone RP11-18L16, complete sequence Length = 184453 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 cttgagaagcgtcagcaggg 513 |||||||||||||||||||| Sbjct: 130667 cttgagaagcgtcagcaggg 130648
>gb|BC081464.1| Mus musculus ribosomal protein S8, mRNA (cDNA clone IMAGE:5714012) Length = 496 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 98 aagaagcgaaagtatgagct 117
>ref|XM_787851.1| PREDICTED: Strongylocentrotus purpuratus similar to RNA-directed DNA polymerase family member (3I9) (LOC588153), partial mRNA Length = 1885 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 gcaaagaagagcaacaaagt 483 |||||||||||||||||||| Sbjct: 1629 gcaaagaagagcaacaaagt 1648
>gb|AC124038.5| Mus Musculus chromosome 4 BAC, clone CT7-543E13, strain 129Sv ES cell line, Complete Sequence, complete sequence Length = 104360 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 68907 aagaagcgaaagtatgagct 68926
>gb|AC124037.5| Mus Musculus chromosome 4 BAC, clone CT7-104L5 strain 129Sv ES cell line, Complete Sequence, complete sequence Length = 134412 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 65493 aagaagcgaaagtatgagct 65474
>emb|X73829.1|MMRPS8 M.musculus mRNA for ribosomal protein S8 Length = 671 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 73 aagaagcgaaagtatgagct 92
>emb|BX842622.1| Neurospora crassa DNA linkage group I BAC clone B15B3 Length = 76690 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tggaggaagaagcgaaagta 90 |||||||||||||||||||| Sbjct: 62354 tggaggaagaagcgaaagta 62335
>gb|AC164548.3| Mus musculus BAC clone RP24-243A3 from chromosome 9, complete sequence Length = 165415 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 ctgctgccacagaggaagca 466 |||||||||||||||||||| Sbjct: 127326 ctgctgccacagaggaagca 127307
>emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on chromosome 13 Contains the gene for a novel protein similar to ribosomal protein S8 (Rps8) and a CpG island, complete sequence Length = 200125 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 123329 aagaagcgaaagtatgagct 123348
>gb|AC102055.13| Mus musculus chromosome 18, clone RP23-52J5, complete sequence Length = 220747 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 199670 aagaagcgaaagtatgagct 199689
>gb|AC022701.6| Homo sapiens chromosome 18, clone RP11-9H16, complete sequence Length = 173941 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 49991 aagaagcgaaagtatgagct 49972
>dbj|AB212898.1| Mus musculus Myt1l mRNA for neural zinc finger protein NZF-1, complete cds Length = 4854 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 2619 gctgaggttgctgctgctgc 2600
>dbj|AK145478.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0002P20 product:ribosomal protein S8, full insert sequence Length = 1121 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK146303.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730048I11 product:ribosomal protein S8, full insert sequence Length = 449 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>gb|AC027308.5| Homo sapiens chromosome 5 clone CTB-56J15, complete sequence Length = 270154 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 agaggctgaggttgctgctg 449 |||||||||||||||||||| Sbjct: 45275 agaggctgaggttgctgctg 45294
>dbj|AK146806.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920058H09 product:ribosomal protein S8, full insert sequence Length = 693 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK151544.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031J02 product:ribosomal protein S8, full insert sequence Length = 480 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>gb|AC080051.6| Homo sapiens chromosome 18, clone RP11-603M14, complete sequence Length = 168063 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 146850 aagaagcgaaagtatgagct 146869
>dbj|AK168609.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920038C11 product:ribosomal protein S8, full insert sequence Length = 694 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK166848.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0017B18 product:ribosomal protein S8, full insert sequence Length = 687 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>emb|CR318639.6| Mouse DNA sequence from clone RP23-317N11 on chromosome 2, complete sequence Length = 193326 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 131339 aagaagcgaaagtatgagct 131358
>dbj|AK010650.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410041L12 product:ribosomal protein S8, full insert sequence Length = 740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 138 aagaagcgaaagtatgagct 157
>dbj|AK010306.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400009M23 product:ribosomal protein S8, full insert sequence Length = 426 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 83 aagaagcgaaagtatgagct 102
>gb|AC159203.2| Mus musculus BAC clone RP23-239O13 from chromosome 13, complete sequence Length = 181617 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 gaggaagcaaagaagagcaa 477 |||||||||||||||||||| Sbjct: 81910 gaggaagcaaagaagagcaa 81891
>dbj|AK088660.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430023A07 product:ribosomal protein S8, full insert sequence Length = 694 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK009023.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300003L23 product:ribosomal protein S8, full insert sequence Length = 688 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK019223.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700082J10 product:ribosomal protein S8, full insert sequence Length = 475 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK012665.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810003O18 product:ribosomal protein S8, full insert sequence Length = 713 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 110 aagaagcgaaagtatgagct 129
>dbj|AK076608.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921533D20 product:myelin transcription factor 1-like, full insert sequence Length = 2144 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 452 gctgaggttgctgctgctgc 433
>dbj|AK012562.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700084J09 product:ribosomal protein S8, full insert sequence Length = 475 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK012435.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055J16 product:ribosomal protein S8, full insert sequence Length = 688 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK049967.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630034G21 product:myelin transcription factor 1-like, full insert sequence Length = 2509 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 856 gctgaggttgctgctgctgc 837
>dbj|AK011642.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610032N21 product:ribosomal protein S8, full insert sequence Length = 680 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 83 aagaagcgaaagtatgagct 102
>dbj|AK011058.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510039N06 product:ribosomal protein S8, full insert sequence Length = 694 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 91 aagaagcgaaagtatgagct 110
>dbj|AK011048.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510039B14 product:ribosomal protein S8, full insert sequence Length = 710 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 107 aagaagcgaaagtatgagct 126
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 gctgctgccgctgccaaaaa 411 |||||||||||||||||||| Sbjct: 21268666 gctgctgccgctgccaaaaa 21268685
>gb|AC018474.31| Homo sapiens 12 BAC RP11-757E18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172303 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 cagtgtgggagagctgatgg 610 |||||||||||||||||||| Sbjct: 146837 cagtgtgggagagctgatgg 146856
>gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, complete sequence Length = 209613 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 539 gagcagttcagcggtggaaggttg 562 ||||||||||| |||||||||||| Sbjct: 111953 gagcagttcagaggtggaaggttg 111976
>gb|AC116637.4| Homo sapiens BAC clone RP11-502G15 from 2, complete sequence Length = 3994 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ccttgtgaagaatgccattg 317 |||||||||||||||||||| Sbjct: 2703 ccttgtgaagaatgccattg 2684
>gb|AY072291.1| Spodoptera frugiperda ribosomal protein S8 mRNA, complete cds Length = 664 Score = 40.1 bits (20), Expect = 8.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagcttggccgccagcctgccaacactaagctt 124 |||||| | ||||||||| | || |||| | ||||||||||||||||| Sbjct: 76 aagaagaggaagtatgagttaggacgcccggctgccaacactaagctt 123
>gb|AC074019.7| Homo sapiens BAC clone RP11-271M11 from 2, complete sequence Length = 127559 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ccttgtgaagaatgccattg 317 |||||||||||||||||||| Sbjct: 709 ccttgtgaagaatgccattg 690
>gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosome 8, complete sequence Length = 232127 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ctgctgctgccacagaggaa 463 |||||||||||||||||||| Sbjct: 214554 ctgctgctgccacagaggaa 214535
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 gctgctgccgctgccaaaaa 411 |||||||||||||||||||| Sbjct: 54951 gctgctgccgctgccaaaaa 54970
>gb|BC079651.1| Mus musculus myelin transcription factor 1-like, mRNA (cDNA clone IMAGE:6844118) Length = 4741 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 2896 gctgaggttgctgctgctgc 2877
>emb|AL845476.15| Mouse DNA sequence from clone RP23-355G16 on chromosome 2, complete sequence Length = 218484 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 30633 aagaagcgaaagtatgagct 30614
>gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, complete sequence Length = 167125 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 143979 gctgaggttgctgctgctgc 143960
>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence Length = 195874 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 7061 aagaagcgaaagtatgagct 7080
>gb|BC027217.1| Mus musculus ribosomal protein S8, mRNA (cDNA clone MGC:25621 IMAGE:4205924), complete cds Length = 688 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 70 aagaagcgaaagtatgagct 89
>dbj|AK065056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J06, full insert sequence Length = 6528 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ttcgagcaacaagacagtga 143 |||||||||||||||||||| Sbjct: 2043 ttcgagcaacaagacagtga 2024
>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence Length = 222792 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 agtccagaggaagcttgaga 500 |||||||||||||||||||| Sbjct: 210050 agtccagaggaagcttgaga 210031
>gb|AE003654.3| Drosophila melanogaster chromosome 2L, section 63 of 83 of the complete sequence Length = 258558 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 gttgctgctgctgccacaga 459 |||||||||||||||||||| Sbjct: 111941 gttgctgctgctgccacaga 111960
>gb|AC102906.12| Mus musculus chromosome 7, clone RP24-291N22, complete sequence Length = 132746 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 96092 aagaagcgaaagtatgagct 96073
>dbj|AK122365.1| Mus musculus mRNA for mKIAA0760 protein Length = 4773 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ctgctgctgccacagaggaa 463 |||||||||||||||||||| Sbjct: 426 ctgctgctgccacagaggaa 407
>dbj|AB093283.1| Mus musculus mRNA for mKIAA1106 protein Length = 4194 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 2374 gctgaggttgctgctgctgc 2355
>emb|BX005165.11| Mouse DNA sequence from clone RP24-75K17 on chromosome 2, complete sequence Length = 76077 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 7556 aagaagcgaaagtatgagct 7537
>gb|AF004295.1|AF004295 Mus musculus myelin transcription factor 1-like mRNA, complete cds Length = 4532 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 2831 gctgaggttgctgctgctgc 2812
>gb|U86338.1|MMU86338 Mus musculus zinc finger protein Png-1 (Png-1) mRNA, complete cds Length = 4563 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 2743 gctgaggttgctgctgctgc 2724
>gb|U48809.1|RNU48809 Rattus norvegicus neural zinc finger factor-1 (NZF-1) mRNA, complete cds Length = 4511 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 2912 gctgaggttgctgctgctgc 2893
>emb|AL935320.10| Mouse DNA sequence from clone RP23-275N21 on chromosome 2, complete sequence Length = 161265 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 129314 aagaagcgaaagtatgagct 129333
>gb|AC144761.4| Mus musculus BAC clone RP24-303C2 from 1, complete sequence Length = 176981 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 gctgaggggcaagaggctgaggtt 442 |||||| ||||||||||||||||| Sbjct: 116438 gctgagaggcaagaggctgaggtt 116461
>ref|NM_033327.2| Mus musculus zinc finger protein 423 (Zfp423), transcript variant 1, mRNA Length = 4916 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ctgctgctgccacagaggaa 463 |||||||||||||||||||| Sbjct: 460 ctgctgctgccacagaggaa 441
>gb|AC152412.2| Mus musculus BAC clone RP23-383B18 from 7, complete sequence Length = 196399 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gaagcagaaggcatggagga 77 |||||||||||||||||||| Sbjct: 99481 gaagcagaaggcatggagga 99462
>emb|BX000464.8| Mouse DNA sequence from clone RP23-166A1 on chromosome 2, complete sequence Length = 85939 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 54831 aagaagcgaaagtatgagct 54850
>gb|U67081.1|RNU67081 Rattus norvegicus C2-HC type zinc finger protein r-MyT2 mRNA, complete cds Length = 2830 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gctgaggttgctgctgctgc 453 |||||||||||||||||||| Sbjct: 1000 gctgaggttgctgctgctgc 981
>gb|AC163731.2| Mus musculus BAC clone RP23-380F10 from chromosome 17, complete sequence Length = 185201 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 gccctgggccagtgtgggag 601 |||||||||||||||||||| Sbjct: 17680 gccctgggccagtgtgggag 17661
>emb|AL845468.4| Mouse DNA sequence from clone RP23-67E6 on chromosome 2, complete sequence Length = 217609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 17467 aagaagcgaaagtatgagct 17448
>emb|AL671866.8| Mouse DNA sequence from clone RP23-59L24 on chromosome 4, complete sequence Length = 230447 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 aagaagcgaaagtatgagct 96 |||||||||||||||||||| Sbjct: 104153 aagaagcgaaagtatgagct 104172
>gb|AC108908.16| Mus musculus chromosome 7, clone RP23-179K7, complete sequence Length = 220289 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 agtgtgggagagctgatggg 611 |||||||||||||||||||| Sbjct: 216315 agtgtgggagagctgatggg 216296
>emb|AL772304.2| Mouse DNA sequence from clone RP23-401E12 on chromosome 4, complete sequence Length = 115477 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 462 aagcaaagaagagcaacaaagtccagag 489 |||| ||||||||||||||||| ||||| Sbjct: 15468 aagccaagaagagcaacaaagtacagag 15495 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,312,284 Number of Sequences: 3902068 Number of extensions: 6312284 Number of successful extensions: 164610 Number of sequences better than 10.0: 241 Number of HSP's better than 10.0 without gapping: 242 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 163862 Number of HSP's gapped (non-prelim): 668 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
