ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6n21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472335.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2667 Score = 658 bits (332), Expect = 0.0 Identities = 489/540 (90%), Gaps = 1/540 (0%) Strand = Plus / Plus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 |||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||| Sbjct: 1804 attgctagcttcatcttctctggaccaactggtgtcggtaaatcag-agttagcaaaggc 1862 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 ||| ||| |||||||||| |||||||| || |||||||||||| |||| |||||||| || Sbjct: 1863 tcttgcagcctactactttggctcagaagaggccatgatcagactagacatgagtgagtt 1922 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| |||||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 1923 catggagaggcatacagtctccaagctcattggatcacctccaggttatgttggttacac 1982 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 |||||| |||||||| |||||||||||||| ||||| |||||||| ||||||||||| || Sbjct: 1983 tgagggtggtcaactgacagaagcagttcgccgccgaccatacactgttgttctcttcga 2042 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2043 tgagattgaaaaggcacatcctgatgtcttcaacatgatgcttcagatcttagaagatgg 2102 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 || || || || |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 2103 aagactaactgacagcaagggtcggactgttgatttcaagaacacactgttgatcatgac 2162 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 2163 atcaaatgttggaagcagtgtcattgagaagggaggacggaagattggatttgaccttga 2222 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 || |||||||||||| |||||||| || ||||| |||||||||||||| || ||| |||| Sbjct: 2223 ctatgatgagaaagacaccagctacaataggattaagagcttggtgactgaagagctgaa 2282 Query: 488 gcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 |||||| ||| | ||||||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 2283 gcagtacttccgacctgagttcttaaacagattggacgagatgattgtgttccggcagct 2342
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 658 bits (332), Expect = 0.0 Identities = 489/540 (90%), Gaps = 1/540 (0%) Strand = Plus / Minus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 |||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||| Sbjct: 19611233 attgctagcttcatcttctctggaccaactggtgtcggtaaatcag-agttagcaaaggc 19611175 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 ||| ||| |||||||||| |||||||| || |||||||||||| |||| |||||||| || Sbjct: 19611174 tcttgcagcctactactttggctcagaagaggccatgatcagactagacatgagtgagtt 19611115 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| |||||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 19611114 catggagaggcatacagtctccaagctcattggatcacctccaggttatgttggttacac 19611055 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 |||||| |||||||| |||||||||||||| ||||| |||||||| ||||||||||| || Sbjct: 19611054 tgagggtggtcaactgacagaagcagttcgccgccgaccatacactgttgttctcttcga 19610995 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19610994 tgagattgaaaaggcacatcctgatgtcttcaacatgatgcttcagatcttagaagatgg 19610935 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 || || || || |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 19610934 aagactaactgacagcaagggtcggactgttgatttcaagaacacactgttgatcatgac 19610875 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 19610874 atcaaatgttggaagcagtgtcattgagaagggaggacggaagattggatttgaccttga 19610815 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 || |||||||||||| |||||||| || ||||| |||||||||||||| || ||| |||| Sbjct: 19610814 ctatgatgagaaagacaccagctacaataggattaagagcttggtgactgaagagctgaa 19610755 Query: 488 gcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 |||||| ||| | ||||||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 19610754 gcagtacttccgacctgagttcttaaacagattggacgagatgattgtgttccggcagct 19610695
>dbj|AK058510.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G07, full insert sequence Length = 1527 Score = 658 bits (332), Expect = 0.0 Identities = 489/540 (90%), Gaps = 1/540 (0%) Strand = Plus / Plus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 |||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||| Sbjct: 354 attgctagcttcatcttctctggaccaactggtgtcggtaaatcag-agttagcaaaggc 412 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 ||| ||| |||||||||| |||||||| || |||||||||||| |||| |||||||| || Sbjct: 413 tcttgcagcctactactttggctcagaagaggccatgatcagactagacatgagtgagtt 472 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| |||||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 473 catggagaggcatacagtctccaagctcattggatcacctccaggttatgttggttacac 532 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 |||||| |||||||| |||||||||||||| ||||| |||||||| ||||||||||| || Sbjct: 533 tgagggtggtcaactgacagaagcagttcgccgccgaccatacactgttgttctcttcga 592 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 593 tgagattgaaaaggcacatcctgatgtcttcaacatgatgcttcagatcttagaagatgg 652 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 || || || || |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 653 aagactaactgacagcaagggtcggactgttgatttcaagaacacactgttgatcatgac 712 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 713 atcaaatgttggaagcagtgtcattgagaagggaggacggaagattggatttgaccttga 772 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 || |||||||||||| |||||||| || ||||| |||||||||||||| || ||| |||| Sbjct: 773 ctatgatgagaaagacaccagctacaataggattaagagcttggtgactgaagagctgaa 832 Query: 488 gcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 |||||| ||| | ||||||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 833 gcagtacttccgacctgagttcttaaacagattggacgagatgattgtgttccggcagct 892
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 658 bits (332), Expect = 0.0 Identities = 489/540 (90%), Gaps = 1/540 (0%) Strand = Plus / Minus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 |||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||| Sbjct: 61959 attgctagcttcatcttctctggaccaactggtgtcggtaaatcag-agttagcaaaggc 61901 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 ||| ||| |||||||||| |||||||| || |||||||||||| |||| |||||||| || Sbjct: 61900 tcttgcagcctactactttggctcagaagaggccatgatcagactagacatgagtgagtt 61841 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| |||||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 61840 catggagaggcatacagtctccaagctcattggatcacctccaggttatgttggttacac 61781 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 |||||| |||||||| |||||||||||||| ||||| |||||||| ||||||||||| || Sbjct: 61780 tgagggtggtcaactgacagaagcagttcgccgccgaccatacactgttgttctcttcga 61721 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 61720 tgagattgaaaaggcacatcctgatgtcttcaacatgatgcttcagatcttagaagatgg 61661 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 || || || || |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 61660 aagactaactgacagcaagggtcggactgttgatttcaagaacacactgttgatcatgac 61601 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 61600 atcaaatgttggaagcagtgtcattgagaagggaggacggaagattggatttgaccttga 61541 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 || |||||||||||| |||||||| || ||||| |||||||||||||| || ||| |||| Sbjct: 61540 ctatgatgagaaagacaccagctacaataggattaagagcttggtgactgaagagctgaa 61481 Query: 488 gcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 |||||| ||| | ||||||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 61480 gcagtacttccgacctgagttcttaaacagattggacgagatgattgtgttccggcagct 61421
>gb|AY108805.1| Zea mays PCO077883 mRNA sequence Length = 2049 Score = 389 bits (196), Expect = e-105 Identities = 415/488 (85%) Strand = Plus / Plus Query: 60 gcaaaggctctggcatcctactacttcggctcagaggaagccatgatcagattagatatg 119 ||||||||||| ||| |||| ||||| ||||| ||||| || |||||| | | |||||| Sbjct: 1093 gcaaaggctcttgcagcctattactttggctctgaggaggctatgatccggcttgatatg 1152 Query: 120 agtgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgtt 179 |||||||||||||||||||| || || ||||| || || || ||||||||||| ||||| Sbjct: 1153 agtgaattcatggagagacacacggtatccaagctgattggttcacctccaggatatgta 1212 Query: 180 ggctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgtt 239 || ||||||||||| || || || ||||| |||||||| || || |||||||||||||| Sbjct: 1213 ggatacactgagggtggccagctgacagaggcagttcgacggcggccatacacagttgtg 1272 Query: 240 ctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatctta 299 ||||||||||||||||| |||||||| || |||||||||||||||||||||||||| || Sbjct: 1273 ctctttgatgagattgagaaggcacaccctgatgtcttcaacatgatgcttcagattttg 1332 Query: 300 gaagatgggaggctgacagatagcaagggacggacagttgatttcaagaacacactgttg 359 ||||||||||| |||| || ||||||||| |||| || || |||||||||||||| || Sbjct: 1333 gaagatgggagattgactgacagcaagggaaggacggtggacttcaagaacacactcctg 1392 Query: 360 atcatgacatcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggttt 419 |||||||| || ||||| || |||||||||||||||||||| || ||||||| || ||| Sbjct: 1393 atcatgacctcaaatgtagggagcagtgtcatcgagaagggtggaaggaagatcggattt 1452 Query: 420 gaccttgactctgatgagaaagataccagctataacaggatcaagagcttggtgaccgag 479 |||||||||||||||||||| || | ||||| | ||||||||||||| |||| | |||| Sbjct: 1453 gaccttgactctgatgagaaggacagtagctacagcaggatcaagagcctggtcatcgag 1512 Query: 480 gagttgaagcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttc 539 ||| |||||||||||||| | ||||||||| | ||| | | ||||||||||| |||||| Sbjct: 1513 gagatgaagcagtatttccgacctgagttcctcaaccgtctcgatgagatgatcgtgttc 1572 Query: 540 aggcagct 547 |||||||| Sbjct: 1573 aggcagct 1580
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 331 bits (167), Expect = 1e-87 Identities = 410/491 (83%) Strand = Plus / Minus Query: 63 aaggctctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagt 122 ||||| ||||| || |||||||| || || || ||||||||||| | | || |||||| Sbjct: 36739 aaggcactggcctcatactactttggatctgaagaagccatgattcgtcttgacatgagt 36680 Query: 123 gaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggc 182 ||||||||||| || || ||||| |||||||| || || ||||||||||| |||||||| Sbjct: 36679 gaattcatggaaaggcacacagtctccaaactcattggttcacctccaggatatgttggt 36620 Query: 183 tacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctc 242 || |||||||| |||||||| || || |||||||| || ||||| ||||| ||||| ||| Sbjct: 36619 tatactgagggtggtcaactgactgaggcagttcggcgtcgtccctacacggttgtactc 36560 Query: 243 tttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaa 302 |||||||||||||| || || ||||| ||||||||||||||||||||||| ||| | ||| Sbjct: 36559 tttgatgagattgagaaagcccatcctgatgtcttcaacatgatgcttcaaatcctggaa 36500 Query: 303 gatgggaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatc 362 ||||||||||| |||||||| |||||| | || || || |||||||||||||| | || Sbjct: 36499 gatgggaggctaacagatagtaagggaagaactgtggacttcaagaacacacttcttata 36440 Query: 363 atgacatcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgac 422 |||||||| ||||| ||||||||||| |||||||| |||||||| || || |||||| Sbjct: 36439 atgacatcaaatgttggaagcagtgtgatcgagaaaggaggccgtcgcataggatttgac 36380 Query: 423 cttgactctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggag 482 ||||||| ||||||||| || | ||| |||||||| |||||||||||||||||||| ||| Sbjct: 36379 cttgactatgatgagaaggacagcagttataacagaatcaagagcttggtgaccgaagag 36320 Query: 483 ttgaagcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcagg 542 |||| || || || ||||| ||||||||||| || | ||||| |||||||| |||||| Sbjct: 36319 ctgaaacaatactttaggccagagttcttgaataggcttgatgaaatgattgttttcagg 36260 Query: 543 cagctgactaa 553 || || ||||| Sbjct: 36259 caactcactaa 36249
>dbj|D29692.1|RICYK4 Oryza sativa mRNA, partial homologous to ATP-dependent protease gene Length = 349 Score = 283 bits (143), Expect = 3e-73 Identities = 206/227 (90%) Strand = Plus / Plus Query: 321 agcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgtcgga 380 |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 4 agcaagggtcggactgttgatttcaagaacacactgttgatcatgacatcaaatgttgga 63 Query: 381 agcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatgagaaa 440 ||||||||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||| Sbjct: 64 agcagtgtcattgagaagggaggacggaagattggatttgaccttgactatgatgagaaa 123 Query: 441 gataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtatttcagg 500 || |||||||| || ||||| |||||||||||||| || ||| |||||||||| ||| | Sbjct: 124 gacaccagctacaataggattaagagcttggtgactgaagagctgaagcagtacttccga 183 Query: 501 cctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 ||||||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 184 cctgagttcttaaacagattggacgagatgattgtgttccggcagct 230
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266, complete sequence Length = 113459 Score = 270 bits (136), Expect = 4e-69 Identities = 355/428 (82%) Strand = Plus / Minus Query: 117 atgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttat 176 ||||||||||| ||||| || || ||||||||||| || ||||| |||||||| || ||| Sbjct: 113356 atgagtgaatttatggaaaggcacacagtgtccaagctcatcggttcacctcctggatat 113297 Query: 177 gttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagtt 236 ||||| ||||||||||| |||||||| || |||||||| || |||||||| ||||| ||| Sbjct: 113296 gttggttacactgagggtggtcaactgactgaagcagtccgacgccgtccctacactgtt 113237 Query: 237 gttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatc 296 || ||||||||||||||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 113236 gtactctttgatgagattgagaaagcccatcctgatgtattcaacatgatgcttcagatc 113177 Query: 297 ttagaagatgggaggctgacagatagcaagggacggacagttgatttcaagaacacactg 356 | |||||||| ||||| ||||| || ||||| | || || || ||||||||||| || Sbjct: 113176 ctggaagatggaaggctaacagacagtaaggggagaactgtggacttcaagaacaccctt 113117 Query: 357 ttgatcatgacatcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattggg 416 | || ||||||||||| || |||||||| || || ||||| ||||| || || || || Sbjct: 113116 cttataatgacatcgaacgttggaagcagcgtgattgagaaaggaggacgtaaaatagga 113057 Query: 417 tttgaccttgactctgatgagaaagataccagctataacaggatcaagagcttggtgacc 476 ||||||||||| | ||||||||| || | | ||||| | ||||||||||||||||| Sbjct: 113056 tttgaccttgattatgatgagaaggacagctcttataatcgaatcaagagcttggtgact 112997 Query: 477 gaggagttgaagcagtatttcaggcctgagttcttgaacagattggatgagatgattgtg 536 |||||| | |||||||| || ||||||||||| ||||| || ||||| || |||||||| Sbjct: 112996 gaggagctaaagcagtactttaggcctgagtttttgaataggttggacgaaatgattgtt 112937 Query: 537 ttcaggca 544 |||||||| Sbjct: 112936 ttcaggca 112929
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 270 bits (136), Expect = 4e-69 Identities = 355/428 (82%) Strand = Plus / Minus Query: 117 atgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttat 176 ||||||||||| ||||| || || ||||||||||| || ||||| |||||||| || ||| Sbjct: 64347 atgagtgaatttatggaaaggcacacagtgtccaagctcatcggttcacctcctggatat 64288 Query: 177 gttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagtt 236 ||||| ||||||||||| |||||||| || |||||||| || |||||||| ||||| ||| Sbjct: 64287 gttggttacactgagggtggtcaactgactgaagcagtccgacgccgtccctacactgtt 64228 Query: 237 gttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatc 296 || ||||||||||||||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 64227 gtactctttgatgagattgagaaagcccatcctgatgtattcaacatgatgcttcagatc 64168 Query: 297 ttagaagatgggaggctgacagatagcaagggacggacagttgatttcaagaacacactg 356 | |||||||| ||||| ||||| || ||||| | || || || ||||||||||| || Sbjct: 64167 ctggaagatggaaggctaacagacagtaaggggagaactgtggacttcaagaacaccctt 64108 Query: 357 ttgatcatgacatcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattggg 416 | || ||||||||||| || |||||||| || || ||||| ||||| || || || || Sbjct: 64107 cttataatgacatcgaacgttggaagcagcgtgattgagaaaggaggacgtaaaatagga 64048 Query: 417 tttgaccttgactctgatgagaaagataccagctataacaggatcaagagcttggtgacc 476 ||||||||||| | ||||||||| || | | ||||| | ||||||||||||||||| Sbjct: 64047 tttgaccttgattatgatgagaaggacagctcttataatcgaatcaagagcttggtgact 63988 Query: 477 gaggagttgaagcagtatttcaggcctgagttcttgaacagattggatgagatgattgtg 536 |||||| | |||||||| || ||||||||||| ||||| || ||||| || |||||||| Sbjct: 63987 gaggagctaaagcagtactttaggcctgagtttttgaataggttggacgaaatgattgtt 63928 Query: 537 ttcaggca 544 |||||||| Sbjct: 63927 ttcaggca 63920
>gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded precursor to chloroplast protein mRNA, complete cds Length = 3239 Score = 270 bits (136), Expect = 4e-69 Identities = 382/464 (82%) Strand = Plus / Plus Query: 78 tactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagaga 137 |||||||| ||||| || ||||||||||| | | || ||||||||||| ||||| || Sbjct: 2026 tactactttggctctgaagaagccatgattcgtcttgacatgagtgaatttatggaaagg 2085 Query: 138 catacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggt 197 || ||||| ||||||||||| || ||||||||||| |||||||| ||||| || || ||| Sbjct: 2086 cacacagtctccaaacttattggttcacctccaggatatgttggttacaccgaaggcggt 2145 Query: 198 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 257 ||| | || ||||||||||| || ||||| ||||| ||||| ||||||||||||||||| Sbjct: 2146 caattgactgaagcagttcgacgtcgtccttacactgttgtactctttgatgagattgag 2205 Query: 258 aaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgaca 317 || || ||||| ||||| ||||||||||||||||| ||| | |||||||| || || ||| Sbjct: 2206 aaagcccatcctgatgtattcaacatgatgcttcaaatccttgaagatggaagactaaca 2265 Query: 318 gatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgtc 377 || |||||||| | || || ||||||||||||||||| | || |||||||| ||||| Sbjct: 2266 gacagcaagggtagaactgtggatttcaagaacacacttcttataatgacatcaaatgtt 2325 Query: 378 ggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatgag 437 ||||||||||| || ||||| |||||||| ||||| ||||| | || | |||||| Sbjct: 2326 ggaagcagtgtgattgagaaaggaggccgccgaattggatttgatttggattacgatgag 2385 Query: 438 aaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtatttc 497 ||||||| ||| ||||| || ||||||||||||||||| |||||| | || || || ||| Sbjct: 2386 aaagatagcagttataatagaatcaagagcttggtgactgaggagctaaaacaatacttc 2445 Query: 498 aggcctgagttcttgaacagattggatgagatgattgtgttcag 541 ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 2446 aggccagagtttttgaataggttggatgaaatgattgttttcag 2489
>gb|M32604.1|TOMCD4B Tomato ATP-dependent protease (CD4B) gene, complete cds Length = 5846 Score = 260 bits (131), Expect = 4e-66 Identities = 447/551 (81%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 3 gacccattgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagca 62 |||| |||||||| ||||| || || || || ||||||||||| ||||||| || | ||| Sbjct: 4664 gacctattgctagtttcatcttttccggtcccactggtgttgggaaatcag-aactggca 4722 Query: 63 aaggctctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagt 122 ||||| ||||| | || ||||| || || || ||||| |||||| | | ||||||||| Sbjct: 4723 aaggcactggctgcatattactttggttctgaagaagcaatgatccggcttgatatgagt 4782 Query: 123 gaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggc 182 || |||||||| ||||| || || || ||||| || ||||| || || ||||||||||| Sbjct: 4783 gagttcatggaaagacacactgtctctaaactcattggatccccccctggttatgttggt 4842 Query: 183 tacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctc 242 ||||| ||||| |||||| | || ||||| ||| | || || || || |||||||| ||| Sbjct: 4843 tacacagagggtggtcaattgactgaagctgttaggcgtcgaccttatacagttgtgctc 4902 Query: 243 tttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaa 302 |||||||||||||| ||||| ||||| ||||||||||||||||||||||| || | ||| Sbjct: 4903 tttgatgagattgagaaggctcatcctgatgtcttcaacatgatgcttcaaattcttgaa 4962 Query: 303 gatgggaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatc 362 ||||| || ||||||| |||||||| | || || ||||||||||||||||| | ||| Sbjct: 4963 gatggaagattgacagacagcaagggtagaactgtagatttcaagaacacacttctcatc 5022 Query: 363 atgacatcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgac 422 |||||||| ||||| ||||| ||||| || ||||| || ||||| || || ||||| Sbjct: 5023 atgacatcaaatgttggaagtagtgtaattgagaaaggtggccgtcgtataggttttgat 5082 Query: 423 cttgactctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggag 482 || ||| ||||||||| |||| ||| || || | ||||||||||| ||||| || || Sbjct: 5083 ctcgaccttgatgagaaggatagcagttacaatcgcatcaagagcttagtgacagaagaa 5142 Query: 483 ttgaagcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcagg 542 ||||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| | Sbjct: 5143 ttgaagcagtacttcaggccagagtttttgaacagattggatgagatgattgtattccgt 5202 Query: 543 cagctgactaa 553 ||||| ||||| Sbjct: 5203 cagctcactaa 5213
>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2992 Score = 242 bits (122), Expect = 1e-60 Identities = 434/537 (80%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 ||||| |||||||| ||||| || |||||||||||||| || || | | || ||||| | Sbjct: 2052 attgcaagcttcatcttctcaggtccaactggtgttggaaagtctgaacttgccaaag-c 2110 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 | |||| | |||||||| || ||||| ||||| ||||| | | ||||||||||| || Sbjct: 2111 tttggctgcttactactttggttcagaagaagctatgatacggcttgatatgagtgagtt 2170 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 |||||| || || || || |||||||| || || ||||| ||||||||||| || || || Sbjct: 2171 catggaaaggcacactgtatccaaactaattggttcacccccaggttatgtaggttatac 2230 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 ||| || || || || || || || ||| | || || |||||||| || ||||| ||||| Sbjct: 2231 tgaaggtggccagcttactgaggctgttagacgtcgcccatacacggtggttctttttga 2290 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||| ||||| ||||||||||| |||||||| |||||||||||||| || | ||||| || Sbjct: 2291 tgaaattgagaaggcacatcctgatgtctttaacatgatgcttcaaattcttgaagacgg 2350 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 |||| |||| || ||||||||| |||| | ||||||||||||||||| | || ||||| Sbjct: 2351 gaggttgactgacagcaagggaaggactgccgatttcaagaacacacttcttattatgac 2410 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||| ||||| ||||| ||||| |||||||| || || || | ||| || |||||||| || Sbjct: 2411 atcaaatgttggaagtagtgtaatcgagaaaggtgggcgtaggataggttttgacctaga 2470 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 || ||||||||| || | ||| || ||| | ||||||||| | ||||| || ||| | || Sbjct: 2471 ctatgatgagaaggacagcagttacaaccgtatcaagagccttgtgactgaagagcttaa 2530 Query: 488 gcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcaggca 544 |||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 2531 gcagtactttaggcctgagttcttgaacagattagatgagatgattgtgtttaggca 2587
>gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, complete cds Length = 5429 Score = 238 bits (120), Expect = 2e-59 Identities = 445/552 (80%), Gaps = 1/552 (0%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagc 61 ||||| ||||| || ||||| || ||||| |||||||||||||| || |||| || | || Sbjct: 4437 cgacctattgccagtttcatcttttctggtccaactggtgttgggaagtcag-aactggc 4495 Query: 62 aaaggctctggcatcctactacttcggctcagaggaagccatgatcagattagatatgag 121 |||| || | ||| | |||||||| || || || ||||| ||||| | | |||||||| Sbjct: 4496 aaagtctttagcaacgtactactttggttctgaagaagcaatgattcggcttgatatgag 4555 Query: 122 tgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgttgg 181 ||| || ||||| ||||| || ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 4556 tgagtttatggaaagacacactgtgtctaaactcatcggttcaccccctgggtatgttgg 4615 Query: 182 ctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttct 241 |||||||| || |||||| |||| ||||| ||| | || || || || |||||||| || Sbjct: 4616 ttacactgaaggtggtcaattaactgaagctgttaggcgtcgaccttatacagttgtgct 4675 Query: 242 ctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttaga 301 ||||||||||||||| ||||| ||||| ||||||||||||||||||||||| || | || Sbjct: 4676 ctttgatgagattgagaaggctcatcctgatgtcttcaacatgatgcttcaaattcttga 4735 Query: 302 agatgggaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgat 361 |||||| || ||||||| ||||| || | || || || |||||||| ||||| | || Sbjct: 4736 agatggaagattgacagacagcaaaggcagaactgtcgacttcaagaatacactcctcat 4795 Query: 362 catgacatcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttga 421 ||||||||||||||| ||||||||||| || ||||| ||||| || || || ||||| Sbjct: 4796 catgacatcgaatgttggaagcagtgtgatagagaaaggaggtcgtcgtataggttttga 4855 Query: 422 ccttgactctgatgagaaagataccagctataacaggatcaagagcttggtgaccgagga 481 || || | ||| ||||| |||| || || ||| | ||||||||||||||||| ||||| Sbjct: 4856 tctagattttgacgagaaggatagtagttacaaccgtatcaagagcttggtgactgagga 4915 Query: 482 gttgaagcagtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcag 541 |||||| ||||| |||||||| ||||| || ||||||||| |||||||||||| ||| | Sbjct: 4916 gttgaaacagtacttcaggccagagtttttaaacagattgagtgagatgattgtattccg 4975 Query: 542 gcagctgactaa 553 ||||| ||||| Sbjct: 4976 tcagctcactaa 4987
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 234 bits (118), Expect = 2e-58 Identities = 395/486 (81%), Gaps = 1/486 (0%) Strand = Plus / Minus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 ||||| |||||||| ||| | || ||||| |||||||||||||| | | | ||||| || Sbjct: 7095944 attgcaagcttcattttcgcaggtccaaccggtgttggtaaatccg-agctcgcaaaagc 7095886 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 || ||| | || ||||| || || ||||| ||||||||||| | |||||||||||||| Sbjct: 7095885 acttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaatt 7095826 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| || || || ||||| | || || ||||| ||||| |||||||| ||||| Sbjct: 7095825 catggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacac 7095766 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 ||||| || || || || || |||||||| ||| | ||||||||||| || || || || Sbjct: 7095765 ggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcga 7095706 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||| |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 7095705 cgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatgg 7095646 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 |||||||| || ||||||||| | ||||| || |||||||||||||| | || ||||| Sbjct: 7095645 aaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgac 7095586 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||||| ||||||||||| |||||||||||||| || |||||||| || || || || || Sbjct: 7095585 ttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcga 7095526 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 | |||||||| || | |||||| | ||||||||||||| | || ||||||| |||| Sbjct: 7095525 ttacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaa 7095466 Query: 488 gcagta 493 |||||| Sbjct: 7095465 gcagta 7095460
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 234 bits (118), Expect = 2e-58 Identities = 395/486 (81%), Gaps = 1/486 (0%) Strand = Plus / Minus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 ||||| |||||||| ||| | || ||||| |||||||||||||| | | | ||||| || Sbjct: 7095823 attgcaagcttcattttcgcaggtccaaccggtgttggtaaatccg-agctcgcaaaagc 7095765 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 || ||| | || ||||| || || ||||| ||||||||||| | |||||||||||||| Sbjct: 7095764 acttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaatt 7095705 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| || || || ||||| | || || ||||| ||||| |||||||| ||||| Sbjct: 7095704 catggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacac 7095645 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 ||||| || || || || || |||||||| ||| | ||||||||||| || || || || Sbjct: 7095644 ggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcga 7095585 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||| |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 7095584 cgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatgg 7095525 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 |||||||| || ||||||||| | ||||| || |||||||||||||| | || ||||| Sbjct: 7095524 aaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgac 7095465 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||||| ||||||||||| |||||||||||||| || |||||||| || || || || || Sbjct: 7095464 ttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcga 7095405 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 | |||||||| || | |||||| | ||||||||||||| | || ||||||| |||| Sbjct: 7095404 ttacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaa 7095345 Query: 488 gcagta 493 |||||| Sbjct: 7095344 gcagta 7095339
>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 68450 Score = 234 bits (118), Expect = 2e-58 Identities = 395/486 (81%), Gaps = 1/486 (0%) Strand = Plus / Minus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 ||||| |||||||| ||| | || ||||| |||||||||||||| | | | ||||| || Sbjct: 63630 attgcaagcttcattttcgcaggtccaaccggtgttggtaaatccg-agctcgcaaaagc 63572 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 || ||| | || ||||| || || ||||| ||||||||||| | |||||||||||||| Sbjct: 63571 acttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaatt 63512 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| || || || ||||| | || || ||||| ||||| |||||||| ||||| Sbjct: 63511 catggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacac 63452 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 ||||| || || || || || |||||||| ||| | ||||||||||| || || || || Sbjct: 63451 ggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcga 63392 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||| |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 63391 cgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatgg 63332 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 |||||||| || ||||||||| | ||||| || |||||||||||||| | || ||||| Sbjct: 63331 aaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgac 63272 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||||| ||||||||||| |||||||||||||| || |||||||| || || || || || Sbjct: 63271 ttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcga 63212 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 | |||||||| || | |||||| | ||||||||||||| | || ||||||| |||| Sbjct: 63211 ttacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaa 63152 Query: 488 gcagta 493 |||||| Sbjct: 63151 gcagta 63146
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 234 bits (118), Expect = 2e-58 Identities = 395/486 (81%), Gaps = 1/486 (0%) Strand = Plus / Minus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 ||||| |||||||| ||| | || ||||| |||||||||||||| | | | ||||| || Sbjct: 4244 attgcaagcttcattttcgcaggtccaaccggtgttggtaaatccg-agctcgcaaaagc 4186 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 || ||| | || ||||| || || ||||| ||||||||||| | |||||||||||||| Sbjct: 4185 acttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaatt 4126 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| || || || ||||| | || || ||||| ||||| |||||||| ||||| Sbjct: 4125 catggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacac 4066 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 ||||| || || || || || |||||||| ||| | ||||||||||| || || || || Sbjct: 4065 ggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcga 4006 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||| |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 4005 cgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatgg 3946 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 |||||||| || ||||||||| | ||||| || |||||||||||||| | || ||||| Sbjct: 3945 aaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgac 3886 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||||| ||||||||||| |||||||||||||| || |||||||| || || || || || Sbjct: 3885 ttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcga 3826 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 | |||||||| || | |||||| | ||||||||||||| | || ||||||| |||| Sbjct: 3825 ttacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaa 3766 Query: 488 gcagta 493 |||||| Sbjct: 3765 gcagta 3760
>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding / nuclease/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT3G48870 (ATCLPC) mRNA, complete cds Length = 3130 Score = 226 bits (114), Expect = 6e-56 Identities = 423/525 (80%), Gaps = 1/525 (0%) Strand = Plus / Plus Query: 17 ttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctctggcatc 76 ||||| |||||||| |||||||||||||| ||||||| || || ||||| |||| | Sbjct: 2090 ttcatcttctctggtccaactggtgttgggaaatcagagctt-gctaaggccttggctgc 2148 Query: 77 ctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagag 136 ||||||||||| ||||| ||||| |||||| | | || |||||||| |||||||| | Sbjct: 2149 ttactacttcggttcagaagaagcaatgatccgtcttgacatgagtgagttcatggaacg 2208 Query: 137 acatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggagg 196 ||| || || || ||||| ||||| |||||||| ||||| || || ||||| || ||||| Sbjct: 2209 acacactgtttcgaaactcatcggttcacctcctggttacgtaggatacacagaaggagg 2268 Query: 197 tcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattga 256 ||| ||||||| || ||||| ||| | || ||||| ||||||||||||| || ||||| Sbjct: 2269 tcagttaacagaggcggttcgacgcaggccctacactcttgttctctttgacgaaattga 2328 Query: 257 aaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgac 316 || |||||||| ||||| ||||||||||||||||||||| ||||||| || || || || Sbjct: 2329 gaaagcacatcccgatgttttcaacatgatgcttcagatcctagaagacggtagactaac 2388 Query: 317 agatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgt 376 |||||||| ||| | || || |||||||||||||| || |||||||||| || || || Sbjct: 2389 tgatagcaaaggaagaactgtcgatttcaagaacacgcttctgatcatgacttcaaacgt 2448 Query: 377 cggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatga 436 || ||||| || ||||| || || || | | ||||||||||| |||||| || || Sbjct: 2449 agggagcagcgtgatcgaaaaaggtggtagaagaattgggtttgatcttgaccacgacga 2508 Query: 437 gaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtattt 496 |||||| | ||| || ||||| ||||||||||| ||||| ||||| | || |||||||| Sbjct: 2509 gaaagacagcagttacaacagaatcaagagcttagtgactgaggaactaaaacagtattt 2568 Query: 497 caggcctgagttcttgaacagattggatgagatgattgtgttcag 541 ||| || |||||||||||||| || |||||||||||||| ||||| Sbjct: 2569 cagaccagagttcttgaacaggttagatgagatgattgttttcag 2613
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 226 bits (114), Expect = 6e-56 Identities = 423/525 (80%), Gaps = 1/525 (0%) Strand = Plus / Minus Query: 17 ttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctctggcatc 76 ||||| |||||||| |||||||||||||| ||||||| || || ||||| |||| | Sbjct: 71677 ttcatcttctctggtccaactggtgttgggaaatcagagctt-gctaaggccttggctgc 71619 Query: 77 ctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagag 136 ||||||||||| ||||| ||||| |||||| | | || |||||||| |||||||| | Sbjct: 71618 ttactacttcggttcagaagaagcaatgatccgtcttgacatgagtgagttcatggaacg 71559 Query: 137 acatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggagg 196 ||| || || || ||||| ||||| |||||||| ||||| || || ||||| || ||||| Sbjct: 71558 acacactgtttcgaaactcatcggttcacctcctggttacgtaggatacacagaaggagg 71499 Query: 197 tcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattga 256 ||| ||||||| || ||||| ||| | || ||||| ||||||||||||| || ||||| Sbjct: 71498 tcagttaacagaggcggttcgacgcaggccctacactcttgttctctttgacgaaattga 71439 Query: 257 aaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgac 316 || |||||||| ||||| ||||||||||||||||||||| ||||||| || || || || Sbjct: 71438 gaaagcacatcccgatgttttcaacatgatgcttcagatcctagaagacggtagactaac 71379 Query: 317 agatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgt 376 |||||||| ||| | || || |||||||||||||| || |||||||||| || || || Sbjct: 71378 tgatagcaaaggaagaactgtcgatttcaagaacacgcttctgatcatgacttcaaacgt 71319 Query: 377 cggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatga 436 || ||||| || ||||| || || || | | ||||||||||| |||||| || || Sbjct: 71318 agggagcagcgtgatcgaaaaaggtggtagaagaattgggtttgatcttgaccacgacga 71259 Query: 437 gaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtattt 496 |||||| | ||| || ||||| ||||||||||| ||||| ||||| | || |||||||| Sbjct: 71258 gaaagacagcagttacaacagaatcaagagcttagtgactgaggaactaaaacagtattt 71199 Query: 497 caggcctgagttcttgaacagattggatgagatgattgtgttcag 541 ||| || |||||||||||||| || |||||||||||||| ||||| Sbjct: 71198 cagaccagagttcttgaacaggttagatgagatgattgttttcag 71154
>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds Length = 3105 Score = 226 bits (114), Expect = 6e-56 Identities = 423/525 (80%), Gaps = 1/525 (0%) Strand = Plus / Plus Query: 17 ttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctctggcatc 76 ||||| |||||||| |||||||||||||| ||||||| || || ||||| |||| | Sbjct: 2091 ttcatcttctctggtccaactggtgttgggaaatcagagctt-gctaaggccttggctgc 2149 Query: 77 ctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagag 136 ||||||||||| ||||| ||||| |||||| | | || |||||||| |||||||| | Sbjct: 2150 ttactacttcggttcagaagaagcaatgatccgtcttgacatgagtgagttcatggaacg 2209 Query: 137 acatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggagg 196 ||| || || || ||||| ||||| |||||||| ||||| || || ||||| || ||||| Sbjct: 2210 acacactgtttcgaaactcatcggttcacctcctggttacgtaggatacacagaaggagg 2269 Query: 197 tcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattga 256 ||| ||||||| || ||||| ||| | || ||||| ||||||||||||| || ||||| Sbjct: 2270 tcagttaacagaggcggttcgacgcaggccctacactcttgttctctttgacgaaattga 2329 Query: 257 aaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgac 316 || |||||||| ||||| ||||||||||||||||||||| ||||||| || || || || Sbjct: 2330 gaaagcacatcccgatgttttcaacatgatgcttcagatcctagaagacggtagactaac 2389 Query: 317 agatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgt 376 |||||||| ||| | || || |||||||||||||| || |||||||||| || || || Sbjct: 2390 tgatagcaaaggaagaactgtcgatttcaagaacacgcttctgatcatgacttcaaacgt 2449 Query: 377 cggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatga 436 || ||||| || ||||| || || || | | ||||||||||| |||||| || || Sbjct: 2450 agggagcagcgtgatcgaaaaaggtggtagaagaattgggtttgatcttgaccacgacga 2509 Query: 437 gaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtattt 496 |||||| | ||| || ||||| ||||||||||| ||||| ||||| | || |||||||| Sbjct: 2510 gaaagacagcagttacaacagaatcaagagcttagtgactgaggaactaaaacagtattt 2569 Query: 497 caggcctgagttcttgaacagattggatgagatgattgtgttcag 541 ||| || |||||||||||||| || |||||||||||||| ||||| Sbjct: 2570 cagaccagagttcttgaacaggttagatgagatgattgttttcag 2614
>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds Length = 3090 Score = 226 bits (114), Expect = 6e-56 Identities = 423/525 (80%), Gaps = 1/525 (0%) Strand = Plus / Plus Query: 17 ttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctctggcatc 76 ||||| |||||||| |||||||||||||| ||||||| || || ||||| |||| | Sbjct: 2075 ttcatcttctctggtccaactggtgttgggaaatcagagctt-gctaaggccttggctgc 2133 Query: 77 ctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagag 136 ||||||||||| ||||| ||||| |||||| | | || |||||||| |||||||| | Sbjct: 2134 ttactacttcggttcagaagaagcaatgatccgtcttgacatgagtgagttcatggaacg 2193 Query: 137 acatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggagg 196 ||| || || || ||||| ||||| |||||||| ||||| || || ||||| || ||||| Sbjct: 2194 acacactgtttcgaaactcatcggttcacctcctggttacgtaggatacacagaaggagg 2253 Query: 197 tcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattga 256 ||| ||||||| || ||||| ||| | || ||||| ||||||||||||| || ||||| Sbjct: 2254 tcagttaacagaggcggttcgacgcaggccctacactcttgttctctttgacgaaattga 2313 Query: 257 aaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgac 316 || |||||||| ||||| ||||||||||||||||||||| ||||||| || || || || Sbjct: 2314 gaaagcacatcccgatgttttcaacatgatgcttcagatcctagaagacggtagactaac 2373 Query: 317 agatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgt 376 |||||||| ||| | || || |||||||||||||| || |||||||||| || || || Sbjct: 2374 tgatagcaaaggaagaactgtcgatttcaagaacacgcttctgatcatgacttcaaacgt 2433 Query: 377 cggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatga 436 || ||||| || ||||| || || || | | ||||||||||| |||||| || || Sbjct: 2434 agggagcagcgtgatcgaaaaaggtggtagaagaattgggtttgatcttgaccacgacga 2493 Query: 437 gaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtattt 496 |||||| | ||| || ||||| ||||||||||| ||||| ||||| | || |||||||| Sbjct: 2494 gaaagacagcagttacaacagaatcaagagcttagtgactgaggaactaaaacagtattt 2553 Query: 497 caggcctgagttcttgaacagattggatgagatgattgtgttcag 541 ||| || |||||||||||||| || |||||||||||||| ||||| Sbjct: 2554 cagaccagagttcttgaacaggttagatgagatgattgttttcag 2598
>dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A21, full insert sequence Length = 3088 Score = 226 bits (114), Expect = 6e-56 Identities = 394/486 (81%), Gaps = 1/486 (0%) Strand = Plus / Plus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 ||||| |||||||| ||| | || ||||| |||||||||||||| | | | ||||| || Sbjct: 2026 attgcaagcttcattttcgcaggtccaaccggtgttggtaaatccg-agctcgcaaaagc 2084 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 || ||| | || ||||| || || ||||| ||||||||||| | |||||||||| ||| Sbjct: 2085 acttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtggatt 2144 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||||| || || || ||||| | || || ||||| ||||| |||||||| ||||| Sbjct: 2145 catggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacac 2204 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 ||||| || || || || || |||||||| ||| | ||||||||||| || || || || Sbjct: 2205 ggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcga 2264 Query: 248 tgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 307 ||||| |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 2265 cgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatgg 2324 Query: 308 gaggctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 |||||||| || ||||||||| | ||||| || |||||||||||||| | || ||||| Sbjct: 2325 aaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgac 2384 Query: 368 atcgaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttga 427 ||||| ||||||||||| |||||||||||||| || |||||||| || || || || || Sbjct: 2385 ttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcga 2444 Query: 428 ctctgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaa 487 | |||||||| || | |||||| | ||||||||||||| | || ||||||| |||| Sbjct: 2445 ttacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaa 2504 Query: 488 gcagta 493 |||||| Sbjct: 2505 gcagta 2510
>gb|AY103877.1| Zea mays PCO122935 mRNA sequence Length = 1798 Score = 226 bits (114), Expect = 6e-56 Identities = 213/245 (86%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 ||||| |||||||||||||||||||| ||||| ||||| ||||||| || |||||||| Sbjct: 1555 attgccagcttcatattctctggaccgactggagttggcaaatcagagctt-gcaaaggc 1613 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 ||||| |||||||||| ||||| ||||| || |||||||| | || |||||||| || Sbjct: 1614 cctggcggcctactactttggctcggaggaggctatgatcaggcttgacatgagtgagtt 1673 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 ||||||| | ||||| || |||||||| || ||||||||||||||||||||||| ||||| Sbjct: 1674 catggagcggcatactgtctccaaactcattggatcacctccaggttatgttgggtacac 1733 Query: 188 tgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttga 247 ||||||||| |||||||| |||||||| |||||||| || |||||||||||||||||||| Sbjct: 1734 tgagggaggccaactaactgaagcagtccgtcgccgcccgtacacagttgttctctttga 1793 Query: 248 tgaga 252 ||||| Sbjct: 1794 tgaga 1798
>ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase AT5G50920 (CLPC) mRNA, complete cds Length = 3183 Score = 194 bits (98), Expect = 2e-46 Identities = 377/470 (80%) Strand = Plus / Plus Query: 78 tactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagaga 137 ||||||||||| || || ||||||||||| | ||||||||||||| ||||||||||| Sbjct: 2136 tactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcatggagagg 2195 Query: 138 catacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggt 197 || || || |||||||| ||||| |||||||| || ||||| || ||||| || |||||| Sbjct: 2196 cacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccgaaggaggt 2255 Query: 198 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 257 || |||||||||| ||| | || || || ||||| || ||||| || |||||||||||| Sbjct: 2256 cagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatgagattgaa 2315 Query: 258 aaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgaca 317 || || ||||||||||| ||||||||||||||||| ||| | |||||||| || | ||| Sbjct: 2316 aaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtagattaaca 2375 Query: 318 gatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgtc 377 || ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| || ||| Sbjct: 2376 gacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatcaaacgtc 2435 Query: 378 ggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatgag 437 |||||||| || || ||||| ||||| | || || || ||| | |||| || ||| Sbjct: 2436 ggaagcagcgtgattgagaaaggaggaagacgtatcggattcgacttagactacgacgag 2495 Query: 438 aaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtatttc 497 ||||| | ||| || ||||| ||||||||| | || || |||||| |||| || || ||| Sbjct: 2496 aaagacagcagttacaacagaatcaagagccttgtaacagaggagctgaaacaatacttc 2555 Query: 498 aggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 || || |||||| | ||||| | || ||||||||||||||||| ||||| Sbjct: 2556 agacccgagttcctaaacaggctagacgagatgattgtgttcagacagct 2605 Score = 194 bits (98), Expect = 2e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 11 gctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctct 70 ||||| ||||||||||| || ||||| |||||||| ||||| | || || || ||| | Sbjct: 2070 gctagtttcatattctcgggtccaaccggtgttgggaaatctgagctt-gccaaagcttt 2128 Query: 71 ggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcat 130 ||| | ||||||||||| || || ||||||||||| | ||||||||||||| ||||| Sbjct: 2129 agcagcttactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcat 2188 Query: 131 ggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactga 190 |||||| || || || |||||||| ||||| |||||||| || ||||| || ||||| || Sbjct: 2189 ggagaggcacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccga 2248 Query: 191 gggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatga 250 |||||||| |||||||||| ||| | || || || ||||| || ||||| || ||||| Sbjct: 2249 aggaggtcagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatga 2308 Query: 251 gattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggag 310 ||||||||| || ||||||||||| ||||||||||||||||| ||| | |||||||| || Sbjct: 2309 gattgaaaaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtag 2368 Query: 311 gctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatc 370 | ||||| ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| Sbjct: 2369 attaacagacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatc 2428 Query: 371 gaatgtcggaagcagtgtcatcgagaagggagg 403 || ||||||||||| || || ||||| ||||| Sbjct: 2429 aaacgtcggaagcagcgtgattgagaaaggagg 2461
>gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, complete cds Length = 3125 Score = 194 bits (98), Expect = 2e-46 Identities = 377/470 (80%) Strand = Plus / Plus Query: 78 tactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagaga 137 ||||||||||| || || ||||||||||| | ||||||||||||| ||||||||||| Sbjct: 2111 tactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcatggagagg 2170 Query: 138 catacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggt 197 || || || |||||||| ||||| |||||||| || ||||| || ||||| || |||||| Sbjct: 2171 cacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccgaaggaggt 2230 Query: 198 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 257 || |||||||||| ||| | || || || ||||| || ||||| || |||||||||||| Sbjct: 2231 cagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatgagattgaa 2290 Query: 258 aaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgaca 317 || || ||||||||||| ||||||||||||||||| ||| | |||||||| || | ||| Sbjct: 2291 aaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtagattaaca 2350 Query: 318 gatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgtc 377 || ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| || ||| Sbjct: 2351 gacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatcaaacgtc 2410 Query: 378 ggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatgag 437 |||||||| || || ||||| ||||| | || || || ||| | |||| || ||| Sbjct: 2411 ggaagcagcgtgattgagaaaggaggaagacgtatcggattcgacttagactacgacgag 2470 Query: 438 aaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtatttc 497 ||||| | ||| || ||||| ||||||||| | || || |||||| |||| || || ||| Sbjct: 2471 aaagacagcagttacaacagaatcaagagccttgtaacagaggagctgaaacaatacttc 2530 Query: 498 aggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 || || |||||| | ||||| | || ||||||||||||||||| ||||| Sbjct: 2531 agacccgagttcctaaacaggctagacgagatgattgtgttcagacagct 2580 Score = 194 bits (98), Expect = 2e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 11 gctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctct 70 ||||| ||||||||||| || ||||| |||||||| ||||| | || || || ||| | Sbjct: 2045 gctagtttcatattctcgggtccaaccggtgttgggaaatctgagctt-gccaaagcttt 2103 Query: 71 ggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcat 130 ||| | ||||||||||| || || ||||||||||| | ||||||||||||| ||||| Sbjct: 2104 agcagcttactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcat 2163 Query: 131 ggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactga 190 |||||| || || || |||||||| ||||| |||||||| || ||||| || ||||| || Sbjct: 2164 ggagaggcacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccga 2223 Query: 191 gggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatga 250 |||||||| |||||||||| ||| | || || || ||||| || ||||| || ||||| Sbjct: 2224 aggaggtcagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatga 2283 Query: 251 gattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggag 310 ||||||||| || ||||||||||| ||||||||||||||||| ||| | |||||||| || Sbjct: 2284 gattgaaaaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtag 2343 Query: 311 gctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatc 370 | ||||| ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| Sbjct: 2344 attaacagacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatc 2403 Query: 371 gaatgtcggaagcagtgtcatcgagaagggagg 403 || ||||||||||| || || ||||| ||||| Sbjct: 2404 aaacgtcggaagcagcgtgattgagaaaggagg 2436
>emb|BX830850.1|CNS0A0O2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1161 Score = 194 bits (98), Expect = 2e-46 Identities = 377/470 (80%) Strand = Plus / Plus Query: 78 tactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagaga 137 ||||||||||| || || ||||||||||| | ||||||||||||| ||||||||||| Sbjct: 182 tactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcatggagagg 241 Query: 138 catacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggt 197 || || || |||||||| ||||| |||||||| || ||||| || ||||| || |||||| Sbjct: 242 cacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccgaaggaggt 301 Query: 198 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 257 || |||||||||| ||| | || || || ||||| || ||||| || |||||||||||| Sbjct: 302 cagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatgagattgaa 361 Query: 258 aaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgaca 317 || || ||||||||||| ||||||||||||||||| ||| | |||||||| || | ||| Sbjct: 362 aaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtagattaaca 421 Query: 318 gatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgtc 377 || ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| || ||| Sbjct: 422 gacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatcaaacgtc 481 Query: 378 ggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatgag 437 |||||||| || || ||||| ||||| | || || || ||| | |||| || ||| Sbjct: 482 ggaagcagcgtgattgagaaaggaggaagacgtatcggattcgacttagactacgacgag 541 Query: 438 aaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtatttc 497 ||||| | ||| || ||||| ||||||||| | || || |||||| |||| || || ||| Sbjct: 542 aaagacagcagttacaacagaatcaagagccttgtaacagaggagctgaaacaatacttc 601 Query: 498 aggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 || || |||||| | ||||| | || ||||||||||||||||| ||||| Sbjct: 602 agacccgagttcctaaacaggctagacgagatgattgtgttcagacagct 651 Score = 194 bits (98), Expect = 2e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 11 gctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctct 70 ||||| ||||||||||| || ||||| |||||||| ||||| | || || || ||| | Sbjct: 116 gctagtttcatattctcgggtccaaccggtgttgggaaatctgagctt-gccaaagcttt 174 Query: 71 ggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcat 130 ||| | ||||||||||| || || ||||||||||| | ||||||||||||| ||||| Sbjct: 175 agcagcttactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcat 234 Query: 131 ggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactga 190 |||||| || || || |||||||| ||||| |||||||| || ||||| || ||||| || Sbjct: 235 ggagaggcacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccga 294 Query: 191 gggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatga 250 |||||||| |||||||||| ||| | || || || ||||| || ||||| || ||||| Sbjct: 295 aggaggtcagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatga 354 Query: 251 gattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggag 310 ||||||||| || ||||||||||| ||||||||||||||||| ||| | |||||||| || Sbjct: 355 gattgaaaaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtag 414 Query: 311 gctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatc 370 | ||||| ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| Sbjct: 415 attaacagacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatc 474 Query: 371 gaatgtcggaagcagtgtcatcgagaagggagg 403 || ||||||||||| || || ||||| ||||| Sbjct: 475 aaacgtcggaagcagcgtgattgagaaaggagg 507
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7 Length = 68726 Score = 194 bits (98), Expect = 2e-46 Identities = 320/393 (81%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 11 gctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctct 70 ||||| ||||||||||| || ||||| |||||||| ||||| | || || || ||| | Sbjct: 19074 gctagtttcatattctcgggtccaaccggtgttgggaaatctgagctt-gccaaagcttt 19016 Query: 71 ggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcat 130 ||| | ||||||||||| || || ||||||||||| | ||||||||||||| ||||| Sbjct: 19015 agcagcttactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcat 18956 Query: 131 ggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactga 190 |||||| || || || |||||||| ||||| |||||||| || ||||| || ||||| || Sbjct: 18955 ggagaggcacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccga 18896 Query: 191 gggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatga 250 |||||||| |||||||||| ||| | || || || ||||| || ||||| || ||||| Sbjct: 18895 aggaggtcagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatga 18836 Query: 251 gattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggag 310 ||||||||| || ||||||||||| ||||||||||||||||| ||| | |||||||| || Sbjct: 18835 gattgaaaaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtag 18776 Query: 311 gctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatc 370 | ||||| ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| Sbjct: 18775 attaacagacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatc 18716 Query: 371 gaatgtcggaagcagtgtcatcgagaagggagg 403 || ||||||||||| || || ||||| ||||| Sbjct: 18715 aaacgtcggaagcagcgtgattgagaaaggagg 18683 Score = 194 bits (98), Expect = 2e-46 Identities = 377/470 (80%) Strand = Plus / Minus Query: 78 tactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagaga 137 ||||||||||| || || ||||||||||| | ||||||||||||| ||||||||||| Sbjct: 19008 tactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcatggagagg 18949 Query: 138 catacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggt 197 || || || |||||||| ||||| |||||||| || ||||| || ||||| || |||||| Sbjct: 18948 cacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccgaaggaggt 18889 Query: 198 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 257 || |||||||||| ||| | || || || ||||| || ||||| || |||||||||||| Sbjct: 18888 cagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatgagattgaa 18829 Query: 258 aaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgaca 317 || || ||||||||||| ||||||||||||||||| ||| | |||||||| || | ||| Sbjct: 18828 aaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtagattaaca 18769 Query: 318 gatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaatgtc 377 || ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| || ||| Sbjct: 18768 gacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatcaaacgtc 18709 Query: 378 ggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgatgag 437 |||||||| || || ||||| ||||| | || || || ||| | |||| || ||| Sbjct: 18708 ggaagcagcgtgattgagaaaggaggaagacgtatcggattcgacttagactacgacgag 18649 Query: 438 aaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtatttc 497 ||||| | ||| || ||||| ||||||||| | || || |||||| |||| || || ||| Sbjct: 18648 aaagacagcagttacaacagaatcaagagccttgtaacagaggagctgaaacaatacttc 18589 Query: 498 aggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 || || |||||| | ||||| | || ||||||||||||||||| ||||| Sbjct: 18588 agacccgagttcctaaacaggctagacgagatgattgtgttcagacagct 18539
>gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2912 Score = 186 bits (94), Expect = 5e-44 Identities = 427/537 (79%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 11 gctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggctct 70 ||||| ||||||||||| || ||||| |||||||| ||||| | || || || ||| | Sbjct: 2018 gctagtttcatattctcgggtccaaccggtgttgggaaatctgagctt-gccaaagcttt 2076 Query: 71 ggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcat 130 ||| | ||||||||||| || || ||||||||||| | |||||||||||||| ||||| Sbjct: 2077 agcagcttactacttcggttccgaagaagccatgattcgtttagatatgagtgagttcat 2136 Query: 131 ggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactga 190 |||||| || || || |||| ||| ||||| |||| ||| || ||||| || ||||| || Sbjct: 2137 ggagaggcacactgtctccacactcatcggttcacttcctggatatgtcggatacaccga 2196 Query: 191 gggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatga 250 |||||||| |||||||||| ||| | || || || ||||| || ||| | || ||||| Sbjct: 2197 aggaggtcagttaacagaagcggttagacgtcgcccttacaccgtcgttttattcgatga 2256 Query: 251 gattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggag 310 ||||||||| || ||||||||||| ||||||||||||||||| ||| | |||||||| || Sbjct: 2257 gattgaaaaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtag 2316 Query: 311 gctgacagatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatc 370 | ||||| ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| Sbjct: 2317 attaacagacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatc 2376 Query: 371 gaatgtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactc 430 || ||||||||||| || || ||||| ||||| | || || || ||| | |||| Sbjct: 2377 aaacgtcggaagcagcgtgattgagaaaggaggaagacgtatcggattcgacttagacta 2436 Query: 431 tgatgagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagca 490 || |||||||| | ||| || ||||| ||||||||| | || || |||||| |||| || Sbjct: 2437 cgacgagaaagacagcagttacaacagaatcaagagccttgtaacagaggagctgaaaca 2496 Query: 491 gtatttcaggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 |||||||| || |||||| | ||||| | || ||||||||||||||||| ||||| Sbjct: 2497 atatttcagacccgagttcctaaacaggctagacgagatgattgtgttcagacagct 2553
>gb|BT009382.1| Triticum aestivum clone wlm96.pk032.n8:fis, full insert mRNA sequence Length = 1205 Score = 176 bits (89), Expect = 5e-41 Identities = 296/364 (81%), Gaps = 1/364 (0%) Strand = Plus / Plus Query: 35 actggtgttggtaaatcagnaattagcaaaggctctggcatcctactacttcggctcaga 94 ||||||||||| ||||||| || |||||| |||||||||| || ||||||||||| || Sbjct: 830 actggtgttgggaaatcagagctt-gcaaagactctggcatcatattacttcggctctga 888 Query: 95 ggaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaact 154 |||||||||||| | | ||||||||||| ||||||||||| || || |||||||| | Sbjct: 889 agaagccatgatccggctggatatgagtgagttcatggagaggcacactgtgtccaagtt 948 Query: 155 tatcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagt 214 ||||| ||||| ||||| ||||| || |||||||| || || || || || || || || Sbjct: 949 gatcggttcaccaccaggctatgtgggatacactgaaggtgggcagctgacggaggcggt 1008 Query: 215 tcgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgt 274 ||| || || ||||||| ||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 1009 tcgacggcggccatacagcgttgtgctttttgatgagattgagaaggcacatccggatgt 1068 Query: 275 cttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggac 334 |||||||||||||| |||||| | ||||| || ||| | || || |||||||| | || Sbjct: 1069 gttcaacatgatgctccagatcctggaagacggaaggttaaccgacagcaaggggagaac 1128 Query: 335 agttgatttcaagaacacactgttgatcatgacatcgaatgtcggaagcagtgtcatcga 394 ||| || ||||||||||| || |||| |||||||| ||||| || ||||| || || || Sbjct: 1129 agtggacttcaagaacacgctcctgataatgacatcaaatgttgggagcagcgtgattga 1188 Query: 395 gaag 398 |||| Sbjct: 1189 gaag 1192
>emb|X75328.1|BNCLPA B.napus (Topas) clpA mRNA Length = 2837 Score = 163 bits (82), Expect = 8e-37 Identities = 360/452 (79%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 96 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 155 ||||||||||| | ||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 1839 gaagccatgattcgtctagatatgagtgagttcatggagaggcacacagtctcgaaactc 1898 Query: 156 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagtt 215 || || |||||||| || || || || |||||||| | ||| ||||| |||||||| Sbjct: 1899 ataggttcacctcctggatacgtcggttacactgaaccacctcagctaacggaagcagtc 1958 Query: 216 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtc 275 | ||||| || |||||||| ||||| || || ||||| || || || || |||||||| Sbjct: 1959 agacgccgcccttacacagtcgttctattcgacgagatagagaaagcccacccagatgtt 2018 Query: 276 ttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggaca 335 ||||||||||||||||||||| | |||||||| || || ||| | ||||| ||| | ||| Sbjct: 2019 ttcaacatgatgcttcagatcctcgaagatggtagactaacaaacagcaaaggaagaaca 2078 Query: 336 gttgatttcaagaacacactgttgatcatgacatcgaatgtcggaagcagtgtcatcgag 395 || || ||||| ||||| || | ||||||||||| ||||||||||||||||| || ||| Sbjct: 2079 gtggacttcaaaaacacgcttctcatcatgacatcaaatgtcggaagcagtgtgattgag 2138 Query: 396 aagggaggccggaagattgggtttgaccttgactctgatgagaaagataccagctataac 455 || ||||| | ||||| || ||||| |||| | |||||||| | |||||| ||| Sbjct: 2139 aaaggaggaagacgcattggtttcgacctggact---acgagaaagacagcagctacaac 2195 Query: 456 aggatcaagagcttggtgaccgaggagttgaagcagtatttcaggcctgagttcttgaac 515 || ||||||||| | |||||| |||||||||| ||||| ||||| || |||||| | ||| Sbjct: 2196 agaatcaagagccttgtgacccaggagttgaaacagtacttcagaccggagttcctcaac 2255 Query: 516 agattggatgagatgattgtgttcaggcagct 547 || | || ||||||||| ||||||| ||||| Sbjct: 2256 aggcttgacgagatgattctgttcagacagct 2287
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 83.8 bits (42), Expect = 6e-13 Identities = 150/186 (80%) Strand = Plus / Plus Query: 122 tgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgttgg 181 |||||| ||||| ||||||||||| || ||| | || || ||||| |||||||| ||||| Sbjct: 35193 tgaatttatggaaagacatacagtttcgaaattaattggttcaccaccaggttacgttgg 35252 Query: 182 ctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttct 241 || | || || |||||| |||| ||||| ||| | || || ||||| || |||||| | Sbjct: 35253 ttataacgaaggtggtcaattaacggaagccgttagacgtcgaccatatactgttgtttt 35312 Query: 242 ctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttaga 301 ||||||||| |||||||||||||||||||||| || || | ||||| ||||| || || Sbjct: 35313 atttgatgaggttgaaaaggcacatccagatgtttttaatttaatgctacagatttttga 35372 Query: 302 agatgg 307 |||||| Sbjct: 35373 agatgg 35378
>gb|AY704571.1| Emiliania huxleyi Clp protease ATP binding subunit (clpC) gene, complete cds; chloroplast Length = 2454 Score = 83.8 bits (42), Expect = 6e-13 Identities = 150/186 (80%) Strand = Plus / Plus Query: 122 tgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgttgg 181 |||||| ||||| ||||||||||| || ||| | || || ||||| |||||||| ||||| Sbjct: 1728 tgaatttatggaaagacatacagtttcgaaattaattggttcaccaccaggttacgttgg 1787 Query: 182 ctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttct 241 || | || || |||||| |||| ||||| ||| | || || ||||| || |||||| | Sbjct: 1788 ttataacgaaggtggtcaattaacggaagccgttagacgtcgaccatatactgttgtttt 1847 Query: 242 ctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttaga 301 ||||||||| |||||||||||||||||||||| || || | ||||| ||||| || || Sbjct: 1848 atttgatgaggttgaaaaggcacatccagatgtttttaatttaatgctacagatttttga 1907 Query: 302 agatgg 307 |||||| Sbjct: 1908 agatgg 1913
>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5 Length = 348178 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 96 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 155 |||||||||||||||||||||||| |||||| ||||| |||||||| || |||| | Sbjct: 334076 gaagccatgatcagattagatatgtctgaatttatggaaagacatactgttagcaaatta 334017 Query: 156 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagt 214 || || ||||||||||| |||||||| | | ||||||||| ||||| ||||| ||||| Sbjct: 334016 attggttcacctccagggtatgttggatttaatgagggaggccaacttacagaggcagt 333958
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 77.8 bits (39), Expect = 3e-11 Identities = 153/191 (80%) Strand = Plus / Plus Query: 90 tcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtcc 149 ||||| ||||| ||| | |||||||||||| ||||| |||||| |||||||||| || Sbjct: 2424 tcagaagaagcaatggtaagattagatatgtctgaatacatggaacgacatacagtttca 2483 Query: 150 aaacttatcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaa 209 ||||| || || || || || ||||| ||||| || | ||| || |||||| |||| ||| Sbjct: 2484 aaactaataggttcgccacctggttacgttggatataatgaaggtggtcaattaacggaa 2543 Query: 210 gcagttcgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatcca 269 |||| | || || || || ||||||||||| ||||||||||||||||| | ||||||| Sbjct: 2544 tcagtaagacgacgaccttatacagttgttctatttgatgagattgaaaaaggacatcca 2603 Query: 270 gatgtcttcaa 280 || || ||||| Sbjct: 2604 gacgtattcaa 2614
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 96 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 155 ||||||||| | |||||||||||| ||| | |||||| || |||||||| |||||| | Sbjct: 147316 gaagccatggtgagattagatatgtctgagtacatggaaaggcatacagtctccaaatta 147375 Query: 156 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagc 211 || || || || |||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 147376 attggttctccaccaggttatgttggttataatgaaggaggtcaattaacagaagc 147431
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 96 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 155 ||||||||| | |||||||||||| ||| | |||||| || |||||||| |||||| | Sbjct: 68035 gaagccatggtgagattagatatgtctgagtacatggaaaggcatacagtctccaaatta 67976 Query: 156 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagc 211 || || || || |||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 67975 attggttctccaccaggttatgttggttataatgaaggaggtcaattaacagaagc 67920
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 240 ctctttgatgagattgaaaaggcacatccagatgtcttcaac 281 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 514026 ctctttgatgagattgagaaggcccatccagatgtcttcaac 513985
>gb|U20646.1|SSU20646 Synechococcus sp. PCC 7942 heat shock protein ClpB (clpB) gene, complete cds Length = 2776 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 240 ctctttgatgagattgaaaaggcacatccagatgtcttcaac 281 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 2153 ctctttgatgagattgagaaggcccatccagatgtcttcaac 2194
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 240 ctctttgatgagattgaaaaggcacatccagatgtcttcaac 281 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1106777 ctctttgatgagattgagaaggcccatccagatgtcttcaac 1106818
>gb|AC138005.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038O16, complete sequence Length = 37350 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 276 ttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggaca 335 |||||||||||||| |||||| | || ||||| |||| || || |||||||| |||| Sbjct: 6429 ttcaacatgatgctccagatcctcgacgatggccggctcacggacagcaaggggaggacg 6370 Query: 336 gttgatttcaagaacacactgttgatcatgacatcgaatgtcggaagcagtgtcatcgag 395 || |||||||||||| | || | ||||||||||| || ||||| ||| | ||||||||| Sbjct: 6369 gtggatttcaagaactcgctcatcatcatgacatccaacgtcggcagcggcgtcatcgag 6310 Query: 396 aaggg 400 ||||| Sbjct: 6309 aaggg 6305
>gb|AC138002.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0011I07 map S10207, complete sequence Length = 123847 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 276 ttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggaca 335 |||||||||||||| |||||| | || ||||| |||| || || |||||||| |||| Sbjct: 103813 ttcaacatgatgctccagatcctcgacgatggccggctcacggacagcaaggggaggacg 103754 Query: 336 gttgatttcaagaacacactgttgatcatgacatcgaatgtcggaagcagtgtcatcgag 395 || |||||||||||| | || | ||||||||||| || ||||| ||| | ||||||||| Sbjct: 103753 gtggatttcaagaactcgctcatcatcatgacatccaacgtcggcagcggcgtcatcgag 103694 Query: 396 aaggg 400 ||||| Sbjct: 103693 aaggg 103689
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 276 ttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggaca 335 |||||||||||||| |||||| | || ||||| |||| || || |||||||| |||| Sbjct: 9095239 ttcaacatgatgctccagatcctcgacgatggccggctcacggacagcaaggggaggacg 9095180 Query: 336 gttgatttcaagaacacactgttgatcatgacatcgaatgtcggaagcagtgtcatcgag 395 || |||||||||||| | || | ||||||||||| || ||||| ||| | ||||||||| Sbjct: 9095179 gtggatttcaagaactcgctcatcatcatgacatccaacgtcggcagcggcgtcatcgag 9095120 Query: 396 aaggg 400 ||||| Sbjct: 9095119 aaggg 9095115
>dbj|AK100126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008I20, full insert sequence Length = 3229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 276 ttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggaca 335 |||||||||||||| |||||| | || ||||| |||| || || |||||||| |||| Sbjct: 2367 ttcaacatgatgctccagatcctcgacgatggccggctcacggacagcaaggggaggacg 2426 Query: 336 gttgatttcaagaacacactgttgatcatgacatcgaatgtcggaagcagtgtcatcgag 395 || |||||||||||| | || | ||||||||||| || ||||| ||| | ||||||||| Sbjct: 2427 gtggatttcaagaactcgctcatcatcatgacatccaacgtcggcagcggcgtcatcgag 2486 Query: 396 aaggg 400 ||||| Sbjct: 2487 aaggg 2491
>dbj|AK069552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023N03, full insert sequence Length = 3226 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 276 ttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggaca 335 |||||||||||||| |||||| | || ||||| |||| || || |||||||| |||| Sbjct: 2359 ttcaacatgatgctccagatcctcgacgatggccggctcacggacagcaaggggaggacg 2418 Query: 336 gttgatttcaagaacacactgttgatcatgacatcgaatgtcggaagcagtgtcatcgag 395 || |||||||||||| | || | ||||||||||| || ||||| ||| | ||||||||| Sbjct: 2419 gtggatttcaagaactcgctcatcatcatgacatccaacgtcggcagcggcgtcatcgag 2478 Query: 396 aaggg 400 ||||| Sbjct: 2479 aaggg 2483
>emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome; segment 4/7 Length = 346683 Score = 65.9 bits (33), Expect = 1e-07 Identities = 156/197 (79%) Strand = Plus / Plus Query: 96 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 155 |||||||||||| || |||| ||| |||||||||||| ||||||| || ||| || Sbjct: 97182 gaagccatgatccgactagacatgtcggaattcatggagcgacatacggtcagcaagctg 97241 Query: 156 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagtt 215 |||||||||||||| || ||||| || | || || || || ||||| || ||||| ||| Sbjct: 97242 atcggatcacctcctggctatgtggggttcaacgaagggggacaactcaccgaagctgtt 97301 Query: 216 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtc 275 |||||| | || || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct: 97302 cgtcgcagaccttataccgttgtgctcttcgacgaaatcgaaaaggcacacccagatgtt 97361 Query: 276 ttcaacatgatgcttca 292 || ||| || ||||||| Sbjct: 97362 tttaacctgctgcttca 97378
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 276 ttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggaca 335 |||||||||||||| |||||| | || ||||| |||| || || |||||||| |||| Sbjct: 9166936 ttcaacatgatgctccagatcctcgacgatggccggctcacggacagcaaggggaggacg 9166877 Query: 336 gttgatttcaagaacacactgttgatcatgacatcgaatgtcggaagcagtgtcatcgag 395 || |||||||||||| | || | ||||||||||| || ||||| ||| | ||||||||| Sbjct: 9166876 gtggatttcaagaactcgctcatcatcatgacatccaacgtcggcagcggcgtcatcgag 9166817 Query: 396 aaggg 400 ||||| Sbjct: 9166816 aaggg 9166812
>gb|AE017158.1| Chlamydophila pneumoniae TW-183, section 2 of 4 of the complete genome Length = 300380 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 216 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccaga 271 ||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 180344 cgtcgccgtccttactgcgttgttctctttgatgagatagaaaaggcacacccaga 180399
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 216 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccaga 271 ||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 357490 cgtcgccgtccttactgcgttgttctctttgatgagatagaaaaggcacacccaga 357435
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 216 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccaga 271 ||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 483706 cgtcgccgtccttactgcgttgttctctttgatgagatagaaaaggcacacccaga 483761
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 216 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccaga 271 ||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 483416 cgtcgccgtccttactgcgttgttctctttgatgagatagaaaaggcacacccaga 483471
>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence Length = 119297 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 232 cagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaac 281 |||||||| | ||||||||||||||||| |||||| ||||||| |||||| Sbjct: 105878 cagttgttttgtttgatgagattgaaaaagcacattcagatgttttcaac 105927
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 195 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 254 |||||| |||| ||||| |||||||| |||||| ||| |||| | || ||||| ||| Sbjct: 1030983 ggtcaattaacggaagctgttcgtcgtaatccatatacaattgtcttgttagatgaaatt 1030924 Query: 255 gaaaaggcacatccagatgtcttcaa 280 |||||||| ||||||||||||||||| Sbjct: 1030923 gaaaaggcccatccagatgtcttcaa 1030898
>gb|AE013175.1| Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the complete genome Length = 10177 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 99 gccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatc 158 |||||||| |||||||||||| |||| |||||| || |||||||| || ||||| || Sbjct: 827 gccatgataagattagatatgtcagaatacatggaaaggcatacagtttcaaaactcata 768 Query: 159 ggatcacctccaggttatgttggct 183 || || |||||||||||||| |||| Sbjct: 767 ggctctcctccaggttatgtgggct 743 Score = 48.1 bits (24), Expect = 0.031 Identities = 111/140 (79%) Strand = Plus / Minus Query: 240 ctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatctta 299 ||||| || ||||||||||| || ||||||||||| |||||||| | || ||||| | Sbjct: 686 ctcttggacgagattgaaaaagcgcatccagatgttttcaacattctcctccagatactt 627 Query: 300 gaagatgggaggctgacagatagcaagggacggacagttgatttcaagaacacactgttg 359 ||||| || ||| |||| || |||||| |||| || |||||||| |||||| | | Sbjct: 626 gaagacggaaggttgactgactctaagggaaggactgtagatttcaaaaacacagttata 567 Query: 360 atcatgacatcgaatgtcgg 379 ||||||||||| |||||||| Sbjct: 566 atcatgacatcaaatgtcgg 547
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 192 ggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgag 251 ||||| ||||| |||||||||||||| | || || || |||| ||||||||||||||| Sbjct: 2312121 ggagggcaacttacagaagcagttcgcagacgaccttatgcagtcgttctctttgatgag 2312062 Query: 252 attgaaaaggcacatccagatgtcttcaa 280 || |||||||| |||| ||||| ||||| Sbjct: 2312061 atagaaaaggcccatcatgatgtgttcaa 2312033
>dbj|AK220924.1| Arabidopsis thaliana mRNA for ATP-dependent Clp protease, ATP-binding subunit, complete cds, clone: RAFL22-49-P06 Length = 774 Score = 58.0 bits (29), Expect = 3e-05 Identities = 182/233 (78%) Strand = Plus / Plus Query: 315 acagatagcaagggacggacagttgatttcaagaacacactgttgatcatgacatcgaat 374 ||||| ||||| ||| | |||||||| ||||| |||||||| | ||||||||||| || Sbjct: 5 acagacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatcaaac 64 Query: 375 gtcggaagcagtgtcatcgagaagggaggccggaagattgggtttgaccttgactctgat 434 ||||||||||| || || ||||| ||||| | || || || ||| | |||| || Sbjct: 65 gtcggaagcagcgtgattgagaaaggaggaagacgtatcggattcgacttagactacgac 124 Query: 435 gagaaagataccagctataacaggatcaagagcttggtgaccgaggagttgaagcagtat 494 |||||||| | ||| || ||||| ||||||||| | || || |||||| |||| || || Sbjct: 125 gagaaagacagcagttacaacagaatcaagagccttgtaacagaggagctgaaacaatac 184 Query: 495 ttcaggcctgagttcttgaacagattggatgagatgattgtgttcaggcagct 547 ||||| || |||||| | ||||| | || ||||||||||||||||| ||||| Sbjct: 185 ttcagacccgagttcctaaacaggctagacgagatgattgtgttcagacagct 237
>gb|AY450635.1| Solanum tuberosum clone plbr8 ATP-dependent CLP protease mRNA, partial cds Length = 669 Score = 56.0 bits (28), Expect = 1e-04 Identities = 143/180 (79%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 8 attgctagcttcatattctctggaccaactggtgttggtaaatcagnaattagcaaaggc 67 |||||||| ||||| || || || || ||||||||||| ||||||| || | |||||||| Sbjct: 487 attgctagtttcatcttttccggtcccactggtgttgggaaatcag-aactggcaaaggc 545 Query: 68 tctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagtgaatt 127 ||||| | || ||||| || || || ||||| |||||| | | ||||||||||| || Sbjct: 546 actggctacatattactttggttctgaagaagcaatgatccggcttgatatgagtgagtt 605 Query: 128 catggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacac 187 |||||| ||||| || || || || || || ||||| || || ||||||||||| ||||| Sbjct: 606 catggaaagacacacggtctctaagctcattggatccccccctggttatgttggttacac 665
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||||||||||||||| | |||||||| || ||||||||||||||| Sbjct: 3644000 cgacccattgctagctttgtcttctctgggccgactggtgttggtaaa 3644047 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Plus Query: 162 tcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgc 221 |||||||| ||||||||||| || | || || |||||| |||| ||||| || || || Sbjct: 3644159 tcacctcctggttatgttggttataacgaaggtggtcaattaaccgaagctgtgcgccgt 3644218 Query: 222 cgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaac 281 ||||| |||||||| || || || || || || ||||| || || || ||||||||||| Sbjct: 3644219 cgtccttacacagtggtgctgttcgacgaaatcgaaaaagcccaccccgatgtcttcaat 3644278 Query: 282 atgatgcttcagatcttagaagatgg 307 ||| |||| || || ||||||||||| Sbjct: 3644279 atgctgctgcaaattttagaagatgg 3644304
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 244 ttgatgagattgaaaaggcacatccagatgt 274 ||||||||||||||||||| ||||||||||| Sbjct: 1359786 ttgatgagattgaaaaggcgcatccagatgt 1359816
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 165 cctccaggttatgttggctacactgagggaggtcaactaacagaagcagtt 215 ||||||||||||||||||||| |||||||| ||| |||| ||||||||| Sbjct: 199078 cctccaggttatgttggctacgaagagggagggcaattaactgaagcagtt 199028
>emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 6/17 Length = 349071 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 244 ttgatgagattgaaaaggcacatccagatgt 274 |||||||||||||||| |||||||||||||| Sbjct: 161712 ttgatgagattgaaaaagcacatccagatgt 161742
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatc 296 ||||||||||||||||| ||||| ||||| || ||||||||| | |||||| Sbjct: 784045 gatgagattgaaaaggcgcatccggatgtttttaacatgatgttacagatc 784095
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaa 280 ||||| ||||||||||| ||||||||||||||||| Sbjct: 594920 gatgaaattgaaaaggcgcatccagatgtcttcaa 594954
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Minus Query: 162 tcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgc 221 |||||||||||||| ||||| || | || || |||||| |||| ||||| || || || Sbjct: 1103088 tcacctccaggttacgttggttataacgaaggtggtcaattaaccgaagctgtgcgccgt 1103029 Query: 222 cgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaac 281 ||||| || || || || || |||||||| || ||||| || || || ||||||||||| Sbjct: 1103028 cgtccttatactgtggtgctatttgatgaaatcgaaaaagcccaccccgatgtcttcaat 1102969 Query: 282 atgatgcttcagatcttagaagatgg 307 ||| |||| || || ||||||||||| Sbjct: 1102968 atgctgctgcaaattttagaagatgg 1102943 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||||||||||||||| | ||||| || || |||||||| |||||| Sbjct: 1103247 cgacccattgctagctttgtcttctccgggccgactggtgtaggtaaa 1103200
>gb|DQ366720.1| Uncultured Prochlorococcus marinus clone HF10-110B11 genomic sequence Length = 42294 Score = 52.0 bits (26), Expect = 0.002 Identities = 146/186 (78%) Strand = Plus / Plus Query: 96 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 155 ||||| ||||| |||||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1303 gaagcaatgattagattagatatgtcagaatttatggaaagacatacagttagtaaactc 1362 Query: 156 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagtt 215 || || || ||||| ||||||||||| | | ||| || ||||| || || ||||| ||| Sbjct: 1363 ataggttcgcctcctggttatgttggttttaatgaaggtggtcagcttactgaagctgtt 1422 Query: 216 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtc 275 | | ||||| || || || ||| | |||||||| |||||||||| ||||||||||| Sbjct: 1423 agaagacgtccttataccgtcgttttatttgatgaagttgaaaaggcgcatccagatgtt 1482 Query: 276 ttcaac 281 |||||| Sbjct: 1483 ttcaac 1488
>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7 Length = 346792 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 240 ctctttgatgagattgaaaaggcacatccagatgtctt 277 |||||||||||||| ||||| |||||||| |||||||| Sbjct: 249792 ctctttgatgagatcgaaaaagcacatcccgatgtctt 249829
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 52.0 bits (26), Expect = 0.002 Identities = 224/290 (77%) Strand = Plus / Minus Query: 78 tactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagaga 137 |||| |||||| || ||||||||||||||| | | |||||| ||||| ||||| || Sbjct: 2467192 tacttcttcggttccgaggaagccatgatccgtctggatatgtcggaatttatggaacga 2467133 Query: 138 catacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggt 197 || || || |||||| | || || || ||||| |||||||| ||||||| || || ||| Sbjct: 2467132 cacaccgtttccaaattaattggttcccctccgggttatgtgggctacaacgaaggcggt 2467073 Query: 198 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 257 || | || |||||||| ||||||||||| ||||| || || || || || || |||||| Sbjct: 2467072 cagttgacggaagcagtacgtcgccgtccctacacggtggtgctgttcgacgaaattgaa 2467013 Query: 258 aaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgaca 317 || || || || || ||||||| ||| | || || || || |||||||| | || || Sbjct: 2467012 aaagcccaccccgacatcttcaatatgcttctgcaaattttggaagatggtcgcctcacc 2466953 Query: 318 gatagcaagggacggacagttgatttcaagaacacactgttgatcatgac 367 ||| |||||| || ||||| |||||||| || || |||||||||||||| Sbjct: 2466952 gatgccaagggtcgcacagtggatttcaaaaataccctgttgatcatgac 2466903
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagat 295 |||||||||||||| || ||||| ||||| |||||||| |||||||||| Sbjct: 896890 gatgagattgaaaaagcgcatccggatgtgttcaacatactgcttcagat 896939
>gb|AE006383.1| Lactococcus lactis subsp. lactis IL1403 section 145 of 218 of the complete genome Length = 11001 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 244 ttgatgagattgaaaaggcacatccagatgtcttcaa 280 ||||||| || ||||| |||||||||||||||||||| Sbjct: 6652 ttgatgaaatcgaaaaagcacatccagatgtcttcaa 6616
>ref|XM_763025.1| Giardia lamblia ATCC 50803 heat shock protein (GLP_64_7313_4665) partial mRNA Length = 2649 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 232 cagttgttctctttgatgagattgaaaaggcacatcc 268 |||||||||||||||| ||||| |||||||| ||||| Sbjct: 2057 cagttgttctctttgacgagatagaaaaggcccatcc 2093
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 225 ccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtctt 277 ||||| |||||||| || |||||||| || ||||| || |||||||||||||| Sbjct: 1034678 ccatatacagttgtactttttgatgaaatagaaaaagctcatccagatgtctt 1034730
>gb|AF016634.1|AF016634 Lactococcus lactis cremoris ClpB chaperone homolog (clpB) and phosphoribosylformylglycinamide cyclo-ligase (pur5) genes, complete cds; and phosphoribosylglycinamide formyltransferase (pur3) gene, partial cds Length = 4109 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 244 ttgatgagattgaaaaggcacatccagatgtcttcaa 280 ||||||| || ||||| |||||||||||||||||||| Sbjct: 2218 ttgatgaaatcgaaaaagcacatccagatgtcttcaa 2254
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgtctt 277 |||||||||||||| || |||||||||||||| Sbjct: 1197259 gatgagattgaaaaagcgcatccagatgtctt 1197290
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 238 ttctctttgatgagattgaaaaggcacatccagatgtcttcaac 281 |||||||||| |||||||||||||| || || ||| |||||||| Sbjct: 328553 ttctctttgacgagattgaaaaggcccaccccgatatcttcaac 328596
>gb|AF348341.1| Plasmodium knowlesi caseinolytic protease C (clpC) gene, partial cds; apicoplast gene for apicoplast product Length = 641 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 162 tcacctccaggttatgttggctacactgagggaggtcaactaacagaa 209 ||||||||||||||| | || ||| | || |||||||||||||||||| Sbjct: 115 tcacctccaggttatataggatactcagaaggaggtcaactaacagaa 162
>ref|XM_674899.1| Plasmodium berghei strain ANKA hypothetical protein (PB000872.00.0) partial mRNA Length = 2955 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| || |||||||||||||||||||| Sbjct: 2401 tttgatgaaatagaaaaggcacatccagatgt 2432
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 553485 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 553532 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| || ||||||||||| Sbjct: 553725 tttgatgaaattgaaaaagctcatccagatgt 553756
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 588537 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 588584 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| || ||||||||||| Sbjct: 588777 tttgatgaaattgaaaaagctcatccagatgt 588808
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 591658 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 591705 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| || ||||||||||| Sbjct: 591898 tttgatgaaattgaaaaagctcatccagatgt 591929
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 506831 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 506878 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| || ||||||||||| Sbjct: 507071 tttgatgaaattgaaaaagctcatccagatgt 507102
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 570225 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 570272 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| || ||||||||||| Sbjct: 570465 tttgatgaaattgaaaaagctcatccagatgt 570496
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 244 ttgatgagattgaaaaggcacatccagatgtcttcaacat 283 |||||||||||||||| |||||||| || ||||| ||||| Sbjct: 136765 ttgatgagattgaaaaagcacatccggaagtctttaacat 136804 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 aaacttatcggatcacctccaggttatgt 178 ||||| || |||||||||||||||||||| Sbjct: 2303818 aaactaattggatcacctccaggttatgt 2303846
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 554854 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 554901 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| || ||||||||||| Sbjct: 555094 tttgatgaaattgaaaaagctcatccagatgt 555125
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 564291 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 564338 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| || ||||||||||| Sbjct: 564531 tttgatgaaattgaaaaagctcatccagatgt 564562
>gb|L43967.2| Mycoplasma genitalium G37, complete genome Length = 580076 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| ||||||||||||||||| ||||| Sbjct: 452149 tttgatgaaattgaaaaggcacatcctgatgt 452118
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| |||||||||||||| Sbjct: 575742 tttgatgaaattgaaaaagcacatccagatgt 575773 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 575502 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 575549
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 237 gttctctttgatgagattgaaaaggcacatccagatgtcttcaa 280 |||||||| |||||||| |||||||| ||| | ||||||||||| Sbjct: 10904 gttctcttggatgagatcgaaaaggcgcatgccgatgtcttcaa 10947
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 202 taacagaagcagttcgtcgccgtccata 229 |||| ||||||||||||||||||||||| Sbjct: 432451 taactgaagcagttcgtcgccgtccata 432424
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| |||||||||||||| Sbjct: 533074 tttgatgaaattgaaaaagcacatccagatgt 533105 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2 cgacccattgctagcttcatattctctggaccaactggtgttggtaaa 49 ||||| |||| |||||| || ||| |||||||||||||||||||||| Sbjct: 532834 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaa 532881
>gb|U46549.1|PBU46549 Plasmodium berghei heat shock protein ClpB mRNA, complete cds Length = 2909 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| || |||||||||||||||||||| Sbjct: 2209 tttgatgaaatagaaaaggcacatccagatgt 2240
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 96 gaagccatgatcagattagatatgagtgaattcatggagagacatac 142 ||||||||||| |||||||||||| ||||| ||||| |||||||| Sbjct: 1012072 gaagccatgattagattagatatgtcagaatttatggaaagacatac 1012026
>gb|AE017129.1| Yersinia pestis biovar Medievalis str. 91001 section 3 of 16 of the complete genome Length = 290002 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 253 ttgaaaaggcacatccagatgtcttcaacat 283 ||||||| |||||||||||||| |||||||| Sbjct: 122367 ttgaaaaagcacatccagatgttttcaacat 122397
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 96 gaagccatgatcagattagatatgagtgaattcatggagagacatac 142 ||||| ||| |||||||||||||| ||||| |||||| |||||||| Sbjct: 56984 gaagcaatggtcagattagatatgtctgaatacatggaaagacatac 57030
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 253 ttgaaaaggcacatccagatgtcttcaacat 283 ||||||| |||||||||||||| |||||||| Sbjct: 1023333 ttgaaaaagcacatccagatgttttcaacat 1023363
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 249 gagattgaaaaggcacatccagatgtcttcaacat 283 ||||| |||||||||||||| ||| |||||||||| Sbjct: 3147706 gagatcgaaaaggcacatccggatatcttcaacat 3147672
>ref|XM_812581.1| Trypanosoma cruzi strain CL Brener ATP-dependent Clp protease subunit, heat shock protein 78 (Tc00.1047053508737.100) partial mRNA Length = 2409 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 235 ttgttctctttgatgagattgaaaaggcacatcca 269 |||||||||| |||||| |||| |||||||||||| Sbjct: 1796 ttgttctcttcgatgagtttgagaaggcacatcca 1830
>ref|XM_758716.1| Theileria parva strain Muguga chromosome 4 hypothetical protein (TP04_0174) partial mRNA Length = 2958 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 93 gaggaagccatgatcagattagatatgagtgaattcatggaga 135 |||||||| || || ||||| ||||||||||||| |||||||| Sbjct: 2254 gaggaagcgataataagatttgatatgagtgaatacatggaga 2296
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 27 ctggaccaactggtgttggtaaa 49 ||||||||||||||||||||||| Sbjct: 678011 ctggaccaactggtgttggtaaa 677989
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 243 tttgatgagattgaaaaggcacatccagatgtcttcaac 281 ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 2063634 tttgatgagatcgaaaaagcgcatccggatgtcttcaac 2063596
>emb|Z73073.1|SCYGR288W S.cerevisiae chromosome VII reading frame ORF YGR288w Length = 5198 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 515 cagattggatgagatgattgtgt 537 ||||||||||||||||||||||| Sbjct: 3258 cagattggatgagatgattgtgt 3280
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaa 280 ||||| ||||||||||| ||||||||||| ||||| Sbjct: 2153171 gatgaaattgaaaaggcccatccagatgtattcaa 2153205
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 253 ttgaaaaggcacatccagatgtcttcaacat 283 ||||||| |||||||||||||| |||||||| Sbjct: 1017698 ttgaaaaagcacatccagatgttttcaacat 1017728
>emb|AL596167.1| Listeria innocua Clip11262 complete genome, segment 5/12 Length = 253050 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 111 ttagatatgagtgaattcatgga 133 ||||||||||||||||||||||| Sbjct: 54176 ttagatatgagtgaattcatgga 54154
>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20 Length = 220050 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 253 ttgaaaaggcacatccagatgtcttcaacat 283 ||||||| |||||||||||||| |||||||| Sbjct: 75230 ttgaaaaagcacatccagatgttttcaacat 75200
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaa 280 |||||||| |||||||| ||||| ||||||||||| Sbjct: 986293 gatgagatcgaaaaggcgcatcccgatgtcttcaa 986327
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 234 gttgttctctttgatgagattgaaaaggcacatccagat 272 ||||||||||||||||| ||||| || || ||||||||| Sbjct: 670024 gttgttctctttgatgaaattgagaaagctcatccagat 670062
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 46.1 bits (23), Expect = 0.12 Identities = 71/87 (81%) Strand = Plus / Plus Query: 195 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 254 |||||||| || ||||| |||| |||||||| || | || |||||||| || ||||| Sbjct: 1456024 ggtcaactcacggaagcgattcgccgccgtccctatgccgtcgttctcttcgacgagatc 1456083 Query: 255 gaaaaggcacatccagatgtcttcaac 281 ||||| || ||||| |||||||||||| Sbjct: 1456084 gaaaaagcccatcctgatgtcttcaac 1456110 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 323 caagggacggacagttgatttcaagaacacactgttgatcatgacatcgaa 373 ||||||||| || ||||| |||||||| || || ||||||||||| ||||| Sbjct: 291263 caagggacgtaccgttgacttcaagaataccctcttgatcatgacctcgaa 291213
>emb|Z73074.1|SCYGR289C S.cerevisiae chromosome VII reading frame ORF YGR289c Length = 4568 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 515 cagattggatgagatgattgtgt 537 ||||||||||||||||||||||| Sbjct: 308 cagattggatgagatgattgtgt 330
>emb|X94332.1|SCCHVIIRA S.cerevisiae DNA for fragment from chromosome VII Length = 35400 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 cagattggatgagatgattgtgt 537 ||||||||||||||||||||||| Sbjct: 8560 cagattggatgagatgattgtgt 8538
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 ggatcacctccaggttatgttgg 181 ||||||||||||||||||||||| Sbjct: 2780334 ggatcacctccaggttatgttgg 2780312
>ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT2G25140 mRNA, complete cds Length = 3223 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 493 atttcaggcctgagttcttgaacaga 518 ||||||||||||||||| |||||||| Sbjct: 2670 atttcaggcctgagttcatgaacaga 2695
>ref|XM_460208.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E22000g) partial mRNA Length = 2406 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 atcggatcacctccaggttatgttgg 181 |||||||||||||| ||||||||||| Sbjct: 1738 atcggatcacctcctggttatgttgg 1763
>gb|AE017263.1| Mesoplasma florum L1 complete genome Length = 793224 Score = 44.1 bits (22), Expect = 0.48 Identities = 58/70 (82%) Strand = Plus / Minus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| |||||| | ||||| || || ||| | || || || ||||||| Sbjct: 489512 tagatatgagtgaatacatggaaaaacatagtgtatctaaattaattggttctcctccag 489453 Query: 172 gttatgttgg 181 |||||||||| Sbjct: 489452 gttatgttgg 489443
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagat 272 |||||||| |||||||| |||||||||||| Sbjct: 322144 tttgatgaaattgaaaaagcacatccagat 322173
>gb|AC139334.3| Mus musculus BAC clone RP23-449C21 from chromosome 18, complete sequence Length = 194665 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 agaggaagccatgatcagatta 113 |||||||||||||||||||||| Sbjct: 139673 agaggaagccatgatcagatta 139694
>emb|CR352307.11| Zebrafish DNA sequence from clone DKEY-81P21 in linkage group 7, complete sequence Length = 116787 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 483 ttgaagcagtatttcaggcctg 504 |||||||||||||||||||||| Sbjct: 79924 ttgaagcagtatttcaggcctg 79903
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 atcggatcacctccaggttatgttgg 181 |||||||||||||| ||||||||||| Sbjct: 1726627 atcggatcacctcctggttatgttgg 1726652
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 gttgttctctttgatgagattgaaaa 259 |||||||| ||||||||||||||||| Sbjct: 883809 gttgttctgtttgatgagattgaaaa 883784
>emb|AL935257.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 6/11 Length = 302050 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaacat 283 ||||| ||||||||||| ||||||||||| || ||||| Sbjct: 164858 gatgaaattgaaaaggcgcatccagatgtgtttaacat 164821
>dbj|AB239684.1| Tetragenococcus halophilus gene for ClpB, complete cds Length = 3187 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 244 ttgatgagattgaaaaggcacatccagatgtctt 277 ||||||| |||||||| || |||||||||||||| Sbjct: 2541 ttgatgaaattgaaaaagctcatccagatgtctt 2574
>gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds Length = 3223 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 493 atttcaggcctgagttcttgaacaga 518 ||||||||||||||||| |||||||| Sbjct: 2670 atttcaggcctgagttcatgaacaga 2695
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 255 gaaaaggcacatccagatgtcttcaacatgatgcttcagatc 296 |||||||| ||||| |||||||||||||| |||| |||||| Sbjct: 1956578 gaaaaggcccatcccgatgtcttcaacatcctgctgcagatc 1956619
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagat 272 |||||||| |||||||| |||||||||||| Sbjct: 319893 tttgatgaaattgaaaaagcacatccagat 319922
>gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds Length = 2895 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 493 atttcaggcctgagttcttgaacaga 518 ||||||||||||||||| |||||||| Sbjct: 2516 atttcaggcctgagttcatgaacaga 2541
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaacat 283 ||||| |||||||| ||||||||||| || |||||||| Sbjct: 1148621 gatgaaattgaaaaagcacatccagaagtattcaacat 1148658
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome Length = 1173390 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 159 ggatcacctccaggttatgttggcta 184 |||||||||||||||||||| ||||| Sbjct: 717548 ggatcacctccaggttatgtaggcta 717523
>ref|NM_121549.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT5G15450 mRNA, complete cds Length = 2999 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ggaccaactggtgttggtaaa 49 ||||||||||||||||||||| Sbjct: 2145 ggaccaactggtgttggtaaa 2165
>ref|NM_124486.2| Arabidopsis thaliana ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT5G51070 (ERD1) mRNA, complete cds Length = 3202 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Plus Query: 87 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 146 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2211 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2270 Query: 147 tccaaacttatcggatcacctccaggttatgttggct 183 ||| || || || || ||||| ||||||||||||| Sbjct: 2271 agcaagctgataggctctcctcctggttatgttggct 2307
>gb|AC164310.2| Mus musculus BAC clone RP23-139E15 from chromosome 8, complete sequence Length = 204269 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 aattcatggagagacatacagtgtc 148 |||||||||||| |||||||||||| Sbjct: 3357 aattcatggagacacatacagtgtc 3333
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gatatgagtgaattcatggag 134 ||||||||||||||||||||| Sbjct: 2059087 gatatgagtgaattcatggag 2059067
>gb|AC135357.3| Mus musculus chromosome 8 clone RP24-84L15, complete sequence Length = 175089 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 aattcatggagagacatacagtgtc 148 |||||||||||| |||||||||||| Sbjct: 149557 aattcatggagacacatacagtgtc 149533
>gb|AC102155.10| Mus musculus chromosome 18, clone RP23-334J12, complete sequence Length = 189666 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 catacacagttgttctctttg 246 ||||||||||||||||||||| Sbjct: 37702 catacacagttgttctctttg 37722 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 catacacagttgttctctttg 246 ||||||||||||||||||||| Sbjct: 37649 catacacagttgttctctttg 37669
>gb|AC132608.2| Mus musculus BAC clone RP23-451E12 from chromosome 18, complete sequence Length = 201478 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 catacacagttgttctctttg 246 ||||||||||||||||||||| Sbjct: 114523 catacacagttgttctctttg 114543 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 catacacagttgttctctttg 246 ||||||||||||||||||||| Sbjct: 114470 catacacagttgttctctttg 114490
>ref|XM_642790.1| Entamoeba histolytica HM-1:IMSS heat shock protein 101, putative (872.t00001) partial mRNA Length = 1137 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 437 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 496 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 497 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 545
>ref|XM_643122.1| Entamoeba histolytica HM-1:IMSS HSP101-related protein (511.t00001) partial mRNA Length = 2529 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1829 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1888 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1889 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 1937
>ref|XM_643226.1| Entamoeba histolytica HM-1:IMSS heat shock protein 101, putative (482.t00003) partial mRNA Length = 1089 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 542 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 601 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 602 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 650
>ref|XM_645824.1| Entamoeba histolytica HM-1:IMSS heat shock protein 101 (192.t00018) partial mRNA Length = 2559 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1859 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1918 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1919 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 1967
>ref|XM_648976.1| Entamoeba histolytica HM-1:IMSS heat shock protein 101, putative (64.t00034) partial mRNA Length = 1062 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 470 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 529 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 530 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 578
>ref|XM_643174.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (493.t00004) partial mRNA Length = 2586 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1886 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1945 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1946 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 1994
>ref|XM_643852.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (365.t00002) partial mRNA Length = 2601 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1901 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1960 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1961 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 2009
>ref|XM_648360.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (82.t00010) partial mRNA Length = 2601 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1901 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1960 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1961 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 2009
>ref|XM_647538.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (111.t00001) partial mRNA Length = 2601 Score = 42.1 bits (21), Expect = 1.9 Identities = 87/109 (79%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 171 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1901 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1960 Query: 172 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 220 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1961 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 2009
>ref|XM_671212.1| Plasmodium berghei strain ANKA heat shock protein 101 (PB001190.00.0) partial mRNA Length = 2676 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 234 gttgttctctttgatgagattgaaaaggcacatccagatgt 274 |||||||| |||||||| | ||||| |||||||||||||| Sbjct: 2116 gttgttctatttgatgaattagaaaaagcacatccagatgt 2156
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 493 atttcaggcctgagttcttgaacagattggatgagat 529 |||||||||| ||| | || ||||||||||||||||| Sbjct: 170833 atttcaggccagagctgttaaacagattggatgagat 170869
>gb|AY133868.1| Arabidopsis thaliana clone U09460 putative ATP-dependent Clp protease ATP-binding subunit ClpD, ERD1 protein precursor (At5g51070) mRNA, complete cds Length = 2869 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Plus Query: 87 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 146 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2047 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2106 Query: 147 tccaaacttatcggatcacctccaggttatgttggct 183 ||| || || || || ||||| ||||||||||||| Sbjct: 2107 agcaagctgataggctctcctcctggttatgttggct 2143
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 240 ctctttgatgagattgaaaaggcacatccagatgtcttcaa 280 ||||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 13022 ctcttcgatgaaattgaaaaggcacataaagatgttttcaa 12982
>gb|AY035112.1| Arabidopsis thaliana putative ATP-dependent Clp protease ATP-binding subunit ClpD, ERD1 protein precursor (At5g51070) mRNA, complete cds Length = 3124 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Plus Query: 87 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 146 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2116 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2175 Query: 147 tccaaacttatcggatcacctccaggttatgttggct 183 ||| || || || || ||||| ||||||||||||| Sbjct: 2176 agcaagctgataggctctcctcctggttatgttggct 2212
>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 2/17 Length = 349287 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 156 atcggatcacctccaggttatgttggcta 184 ||||| ||||||||||| ||||||||||| Sbjct: 40067 atcggctcacctccaggctatgttggcta 40039
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project) Length = 90176 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ggaccaactggtgttggtaaa 49 ||||||||||||||||||||| Sbjct: 21379 ggaccaactggtgttggtaaa 21359
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 493 atttcaggcctgagttcttgaacagattggatgagat 529 |||||||||| ||| | || ||||||||||||||||| Sbjct: 116329 atttcaggccagagctgttaaacagattggatgagat 116365
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 tttgaccttgactctgatgag 437 ||||||||||||||||||||| Sbjct: 226866 tttgaccttgactctgatgag 226846
>gb|AE011965.1| Xanthomonas axonopodis pv. citri str. 306, section 343 of 469 of the complete genome Length = 10871 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 255 gaaaaggcacatccagatgtcttcaacat 283 |||||||| ||||| |||||||||||||| Sbjct: 820 gaaaaggcgcatccggatgtcttcaacat 792
>gb|AC112909.4| Homo sapiens 3 BAC RP11-814O5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114411 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ggaggctgacagatagcaagg 327 ||||||||||||||||||||| Sbjct: 53231 ggaggctgacagatagcaagg 53251
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 cctccaggttatgttggctac 185 ||||||||||||||||||||| Sbjct: 2343412 cctccaggttatgttggctac 2343392
>dbj|AK222024.1| Arabidopsis thaliana mRNA for Erd1 protein precursor, complete cds, clone: RAFL22-71-D22 Length = 1140 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Plus Query: 87 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 146 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 188 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 247 Query: 147 tccaaacttatcggatcacctccaggttatgttggct 183 ||| || || || || ||||| ||||||||||||| Sbjct: 248 agcaagctgataggctctcctcctggttatgttggct 284
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 243 tttgatgagattgaaaaggcacatccagatgtcttcaacat 283 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 2292709 tttgatgaaatcgaaaaagcacatccagatgtatttaacat 2292669
>gb|AY037264.1| Arabidopsis thaliana AT5g51070/K3K7_27 mRNA, complete cds Length = 3164 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Plus Query: 87 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 146 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2213 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2272 Query: 147 tccaaacttatcggatcacctccaggttatgttggct 183 ||| || || || || ||||| ||||||||||||| Sbjct: 2273 agcaagctgataggctctcctcctggttatgttggct 2309
>gb|AF203700.1|AF203700 Phaseolus lunatus ClpB (clpB) mRNA, complete cds; nuclear gene for chloroplast product Length = 3214 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgtcttcaacat 283 |||||||| || || |||||||||| |||||||||||||| Sbjct: 2339 tttgatgaaatagagaaggcacatcacgatgtcttcaacat 2379
>gb|AF270036.1|AF270036 Staphylococcus epidermidis strain SR1 clone step.1043a11 genomic sequence Length = 3742 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 tagatatgagtgaattcatggagagacat 140 |||||||||||||||| ||||||| |||| Sbjct: 618 tagatatgagtgaatttatggagaaacat 590
>gb|AF269928.1|AF269928 Staphylococcus epidermidis strain SR1 clone step.1032f01 genomic sequence Length = 3002 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 tagatatgagtgaattcatggagagacat 140 |||||||||||||||| ||||||| |||| Sbjct: 1603 tagatatgagtgaatttatggagaaacat 1575
>gb|AF269816.1|AF269816 Staphylococcus epidermidis strain SR1 clone step.1024b10 genomic sequence Length = 3985 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 tagatatgagtgaattcatggagagacat 140 |||||||||||||||| ||||||| |||| Sbjct: 1357 tagatatgagtgaatttatggagaaacat 1329
>gb|AF269634.1|AF269634 Staphylococcus epidermidis strain SR1 clone step.1014g06 genomic sequence Length = 3295 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 tagatatgagtgaattcatggagagacat 140 |||||||||||||||| ||||||| |||| Sbjct: 1752 tagatatgagtgaatttatggagaaacat 1724
>gb|U59738.1|ATU59738 Arabidopsis thaliana ATP sulfurylase (APS3) gene, complete cds Length = 3680 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 493 atttcaggcctgagttcttgaacagattggatgagat 529 |||||||||| ||| | || ||||||||||||||||| Sbjct: 3647 atttcaggccagagctgttaaacagattggatgagat 3611
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgt 274 |||||||||||||| || ||||||||||| Sbjct: 935803 gatgagattgaaaaagctcatccagatgt 935831
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacat 140 |||||||||||||||| ||||||| |||| Sbjct: 170716 tagatatgagtgaatttatggagaaacat 170744
>dbj|D17582.1|ATHERD1 Arabidopsis thaliana mRNA for ERD1 protein, complete cds Length = 3125 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Plus Query: 87 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 146 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2161 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2220 Query: 147 tccaaacttatcggatcacctccaggttatgttggct 183 ||| || || || || ||||| ||||||||||||| Sbjct: 2221 agcaagctgataggctctcctcctggttatgttggct 2257
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 ttgatgagattgaaaaggcacatccagat 272 ||||||| || |||||||||||||||||| Sbjct: 763966 ttgatgaaatagaaaaggcacatccagat 763994 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 tggaccaactggtgttggtaaatc 51 ||||||| |||||||||||||||| Sbjct: 1138129 tggaccagctggtgttggtaaatc 1138106
>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome Length = 996422 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 tttgatgagattgaaaaggcacatccaga 271 |||||||| |||||||| ||||||||||| Sbjct: 666863 tttgatgaaattgaaaaagcacatccaga 666835
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 tttgaccttgactctgatgag 437 ||||||||||||||||||||| Sbjct: 98705 tttgaccttgactctgatgag 98685
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 112 tagatatgagtgaattcatggagagacat 140 |||||||||||||||| ||||||| |||| Sbjct: 286453 tagatatgagtgaatttatggagaaacat 286481
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ggaccaactggtgttggtaaa 49 ||||||||||||||||||||| Sbjct: 2279327 ggaccaactggtgttggtaaa 2279307
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 255 gaaaaggcacatccagatgtcttcaacat 283 |||||||| ||||||||||| |||||||| Sbjct: 6047163 gaaaaggcgcatccagatgtattcaacat 6047135
>ref|XM_629660.1| Dictyostelium discoideum hypothetical protein (DDB0184439), partial mRNA Length = 3576 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ggaccaactggtgttggtaaatca 52 ||||||||||| |||||||||||| Sbjct: 1765 ggaccaactggagttggtaaatca 1788
>gb|AC008368.21| Trypanosoma brucei chromosome 2 clone RPCI93-1F7, complete sequence Length = 150968 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||||||| | ||||||||||||||| |||| Sbjct: 145685 tttgatgaggtggaaaaggcacatccaaatgt 145716
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 gagattgaaaaggcacatccagatgtcttcaa 280 |||||||||||||| || || ||||||||||| Sbjct: 1800617 gagattgaaaaggcgcacccggatgtcttcaa 1800586
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||| ||||||||||||||||| || ||||| Sbjct: 659819 tttgacgagattgaaaaggcacaccctgatgt 659850
>gb|AE008449.1| Streptococcus pneumoniae R6 section 65 of 184 of the complete genome Length = 11727 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctccaggttatgttggcta 184 |||||||||||||||||||| Sbjct: 3338 cctccaggttatgttggcta 3319
>gb|AC007866.11| Trypanosoma brucei chromosome 2 clone RPCI93-36E18, complete sequence Length = 110159 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||||||| | ||||||||||||||| |||| Sbjct: 2609 tttgatgaggtggaaaaggcacatccaaatgt 2640
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||||||| | ||||||||||||||| |||| Sbjct: 1086483 tttgatgaggtggaaaaggcacatccaaatgt 1086514
>ref|XM_863711.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9422.2), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 tgagttcttgaacagattgg 522 |||||||||||||||||||| Sbjct: 213 tgagttcttgaacagattgg 232
>gb|AE009347.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 117 of 187 of the complete sequence Length = 12234 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaac 281 |||||||| ||||| || ||||| |||||||||||| Sbjct: 9514 gatgagatcgaaaaagcgcatccggatgtcttcaac 9549
>gb|AE008266.2| Agrobacterium tumefaciens str. C58 linear chromosome, section 70 of 187 of the complete sequence Length = 11252 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaac 281 |||||||| ||||| || ||||| |||||||||||| Sbjct: 3310 gatgagatcgaaaaagcgcatccggatgtcttcaac 3275
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ggaccaactggtgttggtaa 48 |||||||||||||||||||| Sbjct: 1843961 ggaccaactggtgttggtaa 1843942
>gb|AY811873.1| Schistosoma japonicum SJCHGC04151 protein mRNA, partial cds Length = 718 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 atgacatcgaatgtcggaag 382 |||||||||||||||||||| Sbjct: 416 atgacatcgaatgtcggaag 435
>gb|AF512536.1| Hepatitis A virus isolate DL3, complete genome Length = 7476 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 4967 atatgagtgaattcatggag 4986
>ref|XM_946645.1| Trypanosoma brucei TREU927 ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100) (Tb927.2.5980) partial mRNA Length = 2613 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||||||| | ||||||||||||||| |||| Sbjct: 2026 tttgatgaggtggaaaaggcacatccaaatgt 2057
>ref|XM_720276.1| Plasmodium yoelii yoelii str. 17XNL heat shock protein ClpB (PY00565) partial mRNA Length = 3147 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| || |||||||| ||||||||||| Sbjct: 2593 tttgatgaaatagaaaaggctcatccagatgt 2624
>gb|AE004353.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 10 of 93 of the complete chromosome Length = 31190 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 tcacctccaggttatgttggctac 185 |||||||| ||||||||||||||| Sbjct: 18243 tcacctccgggttatgttggctac 18266
>ref|XM_740381.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000511.02.0) partial mRNA Length = 2961 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| || |||||||| ||||||||||| Sbjct: 2410 tttgatgaaatagaaaaggctcatccagatgt 2441
>gb|AC146819.19| Medicago truncatula clone mth2-176k6, complete sequence Length = 127131 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ctggaccaactggtgttggt 46 |||||||||||||||||||| Sbjct: 35460 ctggaccaactggtgttggt 35441
>gb|AC133341.11| Medicago truncatula clone mth2-28i3, complete sequence Length = 138850 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctggaccaactggtgttggt 46 |||||||||||||||||||| Sbjct: 2706 ctggaccaactggtgttggt 2725
>gb|BC085675.1| Danio rerio cDNA clone IMAGE:5912857, **** WARNING: chimeric clone **** Length = 2636 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctcagaggaagccatgatca 108 |||||||||||||||||||| Sbjct: 1395 ctcagaggaagccatgatca 1414
>emb|X95276.2|PFCOMPIRB Plasmodium falciparum complete gene map of plastid-like DNA (IR-B) Length = 14009 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 162 tcacctccaggttatgttggctacactgagggaggtcaactaacagaa 209 |||||||| ||||||||||| || | || ||||||||| |||||||| Sbjct: 12554 tcacctcctggttatgttggttattcagaaggaggtcaattaacagaa 12601
>emb|X87631.1|PFCLPCGEN P.falciparum putative plastid clpC gene (partial) Length = 2298 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 162 tcacctccaggttatgttggctacactgagggaggtcaactaacagaa 209 |||||||| ||||||||||| || | || ||||||||| |||||||| Sbjct: 1621 tcacctcctggttatgttggttattcagaaggaggtcaattaacagaa 1668
>gb|AF485328.1| Hepatitis A virus isolate LY6, complete genome Length = 7477 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 4968 atatgagtgaattcatggag 4987
>gb|AF357222.1| Hepatitis A virus isolate LU38/WT polyprotein gene, complete cds Length = 7477 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 4968 atatgagtgaattcatggag 4987
>gb|AE014274.1| Streptococcus agalactiae 2603V/R section 84 of 100 of the complete genome Length = 22877 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ggaccaactggtgttggtaa 48 |||||||||||||||||||| Sbjct: 20647 ggaccaactggtgttggtaa 20628
>emb|Y17738.2|SSMV17738 Sugarcane streak mosaic virus partial mRNA for polyprotein, isolate Andhra Pradesh Length = 4475 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gaccttgactctgatgagaa 439 |||||||||||||||||||| Sbjct: 2714 gaccttgactctgatgagaa 2733
>emb|Y07826.2|TTDNAKOPN T.thermophilus DnaK operon Length = 6480 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 240 ctctttgatgagattgaaaaggcacatccagatgtcttcaacat 283 |||||||| |||||||| ||||| || || || ||||||||||| Sbjct: 5875 ctctttgacgagattgagaaggcccaccccgacgtcttcaacat 5918
>emb|X83302.1|HAVCOMPL Hepatitis A virus complete genome Length = 7421 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 4922 atatgagtgaattcatggag 4941
>emb|X75216.1|HAVRNAHFS Hepatitis A virus GBM/HFS RNA Length = 7446 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 4922 atatgagtgaattcatggag 4941
>emb|X75215.1|HAVRNAGWT Hepatitis A virus GBM/WT RNA Length = 7450 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 4922 atatgagtgaattcatggag 4941
>emb|X75214.1|HAVRNAGBM Hepatitis A virus GBM/FRhK RNA Length = 7421 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 4904 atatgagtgaattcatggag 4923
>emb|X70845.1|HAV23ABC Hepatitis A virus gene for 2B, 2C, 3A, 3B and 3c proteins Length = 2264 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 1294 atatgagtgaattcatggag 1313
>emb|X15463.1|HAV15B Human hepatitis A virus (HAV) strain HAS-15 mRNA for viral proteins 2C, 3A-3D Length = 2676 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 261 atatgagtgaattcatggag 280
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 246 gatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcag 293 |||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 3760571 gatgagatcgaaaaggcacaccctgatgtgttcaatattctgcttcag 3760524
>gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosome 9, complete sequence Length = 222313 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||||||||| || ||||| ||||||||||| Sbjct: 92108 tttgatgagatagacaaggcccatccagatgt 92077
>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7 Length = 318136 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gatatgagtgaattcatgga 133 |||||||||||||||||||| Sbjct: 107744 gatatgagtgaattcatgga 107763
>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7 Length = 347365 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 ttcaagaacacactgttgatcatgacatcgaa 373 ||||||||||| ||| |||||||||| ||||| Sbjct: 201887 ttcaagaacaccctggtgatcatgacctcgaa 201918
>emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3 Length = 250050 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaccaactggtgttggtaa 48 |||||||||||||||||||| Sbjct: 215986 ggaccaactggtgttggtaa 216005
>emb|AL766854.1|SAG766854 Streptococcus agalactiae NEM316 complete genome, segment 12 Length = 98050 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ggaccaactggtgttggtaa 48 |||||||||||||||||||| Sbjct: 13028 ggaccaactggtgttggtaa 13009
>emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 in linkage group 24, complete sequence Length = 177516 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctcagaggaagccatgatca 108 |||||||||||||||||||| Sbjct: 104815 ctcagaggaagccatgatca 104834
>emb|AJ251205.1|BSU251205 Brucella suis clpB gene for ClpB protein Length = 3179 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gagattgaaaaggcacatccagatgtcttcaa 280 |||||||||||||| || || ||||||||||| Sbjct: 2490 gagattgaaaaggcgcacccggatgtcttcaa 2521
>emb|AJ250726.2|TBR250726 Trypanosoma brucei HSP100 gene, GPI-PLC gene, beta prime COP gene, RPL44 gene, ORF1 (partial), ORF2, ORF3, ORF4, ORF5, ORF6 and ORF7 (partial), shorter allele Length = 24181 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||||||| | ||||||||||||||| |||| Sbjct: 7456 tttgatgaggtggaaaaggcacatccaaatgt 7487
>emb|AJ000080.1|TCAJ80 Trypanosoma brucei hsp100 and gpi-plc genes Length = 7000 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||||||| | ||||||||||||||| |||| Sbjct: 2065 tttgatgaggtggaaaaggcacatccaaatgt 2096
>gb|AC018921.22| Homo sapiens 12 BAC RP11-956E11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188666 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tgatgagattgaaaaggcac 264 |||||||||||||||||||| Sbjct: 74506 tgatgagattgaaaaggcac 74525
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| || |||||||| ||||||||||| Sbjct: 2485832 tttgatgaaatcgaaaaggcgcatccagatgt 2485801
>ref|XM_572184.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 2617 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 ||||| ||||||||||||||||| || ||||| Sbjct: 1846 tttgacgagattgaaaaggcacaccctgatgt 1877
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 tttgatgagattgaaaaggcacatccagatgt 274 |||||||| ||||||||||| ||||| ||||| Sbjct: 443468 tttgatgaaattgaaaaggctcatcctgatgt 443499
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 313 tgacagatagcaagggacggacagttgatttcaagaacac 352 |||| ||| |||| ||| ||||||| |||||||||||||| Sbjct: 19882838 tgactgatggcaaaggaaggacagtagatttcaagaacac 19882877
>gb|AE009461.1| Brucella melitensis 16M chromosome I, section 18 of 195 of the complete sequence Length = 10744 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gagattgaaaaggcacatccagatgtcttcaa 280 |||||||||||||| || || ||||||||||| Sbjct: 9602 gagattgaaaaggcgcacccggatgtcttcaa 9633
>gb|AY974170.1| Hepatitis A virus strain M2 polyprotein mRNA, complete cds Length = 6722 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 4235 atatgagtgaattcatggag 4254
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctccaggttatgttggcta 184 |||||||||||||||||||| Sbjct: 770923 cctccaggttatgttggcta 770904
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 313 tgacagatagcaagggacggacagttgatttcaagaacac 352 |||| ||| |||| ||| ||||||| |||||||||||||| Sbjct: 60439 tgactgatggcaaaggaaggacagtagatttcaagaacac 60478
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 240 ctctttgatgagattgaaaaggcacatccagatgtcttcaacat 283 |||||||| |||||||| ||||| || || || ||||||||||| Sbjct: 1413441 ctctttgacgagattgagaaggcccaccccgacgtcttcaacat 1413398
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 gagattgaaaaggcacatccagatgtcttcaa 280 |||||||||||||| || || ||||||||||| Sbjct: 1817476 gagattgaaaaggcgcacccggatgtcttcaa 1817445
>dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22 Length = 87180 Score = 40.1 bits (20), Expect = 7.5 Identities = 62/76 (81%) Strand = Plus / Plus Query: 108 agattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacct 167 ||||| || |||||||||| ||||||| | ||||| ||| ||| || || || || ||| Sbjct: 1196 agattggacatgagtgaatacatggagcgtcatactgtgagcaagctgataggctctcct 1255 Query: 168 ccaggttatgttggct 183 || ||||||||||||| Sbjct: 1256 cctggttatgttggct 1271
>gb|U91327.1|HSU91327 Human chromosome 12p15 BAC clone CIT987SK-99D8 complete sequence Length = 129252 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tgatgagattgaaaaggcac 264 |||||||||||||||||||| Sbjct: 106725 tgatgagattgaaaaggcac 106706
>dbj|AK064436.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-D08, full insert sequence Length = 1569 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 313 tgacagatagcaagggacggacagttgatttcaagaacac 352 |||| ||| |||| ||| ||||||| |||||||||||||| Sbjct: 709 tgactgatggcaaaggaaggacagtagatttcaagaacac 748
>gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete sequence Length = 165633 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 catacacagttgttctctttgatg 249 |||| ||||||||||||||||||| Sbjct: 51269 cataaacagttgttctctttgatg 51292
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 234 gttgttctctttgatgagattgaaaaggcacatccagatgtctt 277 |||||||| ||||||| ||||||| |||||||||||| |||| Sbjct: 1994253 gttgttcttcttgatgaacttgaaaaagcacatccagatatctt 1994210
>gb|AC005773.1|AC005773 Homo sapiens chromosome 17, clone hRPK.534_P_15, complete sequence Length = 99036 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 gctagcttcatattctctgg 30 |||||||||||||||||||| Sbjct: 83486 gctagcttcatattctctgg 83467
>gb|AF061279.1|AF061279 Plectonema boryanum heat shock protein (clpB) gene, complete cds Length = 2863 Score = 40.1 bits (20), Expect = 7.5 Identities = 74/92 (80%) Strand = Plus / Plus Query: 198 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 257 ||||| || ||||| |||||||| ||||| ||| | || |||| |||||||| || || Sbjct: 2141 caactcacggaagcggttcgtcgtcgtccttactcggtgattctgtttgatgaaatcgag 2200 Query: 258 aaggcacatccagatgtcttcaacatgatgct 289 || || ||||| ||||||||||| ||||||| Sbjct: 2201 aaagcccatcccgatgtcttcaatgtgatgct 2232
>dbj|AB082174.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A1 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082172.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A713 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082171.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A712 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082169.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A404 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082166.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A304 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082165.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A303 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082164.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A301 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082163.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A207 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082162.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A195 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082161.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A168 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082160.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A162 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082159.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A85 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082158.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A157 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082157.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A80 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082156.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A77 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082155.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A75 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082154.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A68 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082153.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A51 Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atatgagtgaattcatggag 134 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,173,366 Number of Sequences: 3902068 Number of extensions: 5173366 Number of successful extensions: 85733 Number of sequences better than 10.0: 279 Number of HSP's better than 10.0 without gapping: 269 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 84223 Number of HSP's gapped (non-prelim): 1485 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
