ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6n15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KPRS1_ORYSA (Q6Z2L5) Ribose-phosphate pyrophosphokinase 1 (EC 2.... 30 1.5
2KPRS1_SPIOL (Q9XG98) Ribose-phosphate pyrophosphokinase 1 (EC 2.... 29 3.3
3KPRS2_SPIOL (Q9XG99) Ribose-phosphate pyrophosphokinase 2, chlor... 29 3.3
4KPRS_SYNP7 (Q59988) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 28 7.4
5KPRS_ANASP (Q8YN97) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 28 7.4

>KPRS1_ORYSA (Q6Z2L5) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1)|
           (Phosphoribosyl pyrophosphate synthetase 1)
          Length = 396

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 3   KLVANMITEAGANR 44
           KLVANMITEAGANR
Sbjct: 186 KLVANMITEAGANR 199



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>KPRS1_SPIOL (Q9XG98) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1)|
           (Phosphoribosyl pyrophosphate synthetase 1)
          Length = 336

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +3

Query: 3   KLVANMITEAGANR 44
           KLVAN+ITEAGANR
Sbjct: 132 KLVANLITEAGANR 145



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>KPRS2_SPIOL (Q9XG99) Ribose-phosphate pyrophosphokinase 2, chloroplast|
           precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate
           synthetase 2)
          Length = 395

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +3

Query: 3   KLVANMITEAGANR 44
           KLVAN+ITEAGANR
Sbjct: 191 KLVANLITEAGANR 204



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>KPRS_SYNP7 (Q59988) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 331

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = +3

Query: 3   KLVANMITEAGANR 44
           KLVAN+IT+AGANR
Sbjct: 128 KLVANLITQAGANR 141



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>KPRS_ANASP (Q8YN97) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 330

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = +3

Query: 3   KLVANMITEAGANR 44
           KLVAN+IT+AGANR
Sbjct: 128 KLVANLITQAGANR 141


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.305    0.113    0.267 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,780,695
Number of Sequences: 219361
Number of extensions: 8834
Number of successful extensions: 95
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
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