ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6n10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LY75_MESAU (Q920P9) Lymphocyte antigen 75 precursor (DEC-205) (C... 32 1.5
2PIAS2_MOUSE (Q8C5D8) Protein inhibitor of activated STAT2 (Prote... 30 5.7
3PUR7_MYCLE (O08361) Phosphoribosylaminoimidazole-succinocarboxam... 30 7.5
4PIAS2_RAT (Q6AZ28) Protein inhibitor of activated STAT2 (Protein... 30 7.5
5YHZ2_YEAST (P38878) Hypothetical 32.1 kDa protein in CTF8-EGD2 i... 29 9.8
6QRI7_YEAST (P43122) Putative protease QRI7 (EC 3.4.24.-) 29 9.8
7CAYP2_MOUSE (Q8BUG5) Calcyphosin-2 (Calcyphosine-2) 29 9.8

>LY75_MESAU (Q920P9) Lymphocyte antigen 75 precursor (DEC-205) (CD205 antigen)|
          Length = 1722

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +1

Query: 181  RRILGACQYVQRDIYLHCDQNLMPRKSSAWSAWNFLGTTSRGFSITYWLNQIQKF---ES 351
            RR+  A  ++  + + HC   L  RKS     WNF   + R     + L+  QK+   E 
Sbjct: 1043 RRLSIAAYFIDEESHYHCALMLNLRKSPLTGTWNFTSCSER-----HSLSLCQKYSENED 1097

Query: 352  GRPF 363
            GRP+
Sbjct: 1098 GRPW 1101



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>PIAS2_MOUSE (Q8C5D8) Protein inhibitor of activated STAT2 (Protein inhibitor of|
           activated STAT x) (Msx-interacting zinc finger protein)
           (DAB2-interacting protein) (DIP) (Androgen
           receptor-interacting protein 3) (ARIP3)
          Length = 621

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = +2

Query: 20  TSCRVKSVSSLDGAAGYXSLGRMMVQWKHTTVSSLGSMHPML 145
           +S RV SV+S+D AA   SL    V + HT VSS+ S  P L
Sbjct: 510 SSVRVPSVTSVDPAAIPPSLTDYSVPFHHTPVSSMSSDLPGL 551



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>PUR7_MYCLE (O08361) Phosphoribosylaminoimidazole-succinocarboxamide synthase|
           (EC 6.3.2.6) (SAICAR synthetase)
          Length = 297

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +1

Query: 226 LHCDQNLMPRKSSAWSAWNF-LGTTSRGFSITYWLNQIQKFESGRPFLVTLNPPCVPDHV 402
           L  D+   P  S  WS  ++ +G   R F   +  N +   ESG      L+PP +PD +
Sbjct: 210 LLADEIFTPDSSRYWSVDDYRVGVVQRSFDKQFVRNWLVSPESGWVRAGALSPPSLPDDI 269

Query: 403 L 405
           +
Sbjct: 270 I 270



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>PIAS2_RAT (Q6AZ28) Protein inhibitor of activated STAT2 (Protein inhibitor of|
           activated STAT x) (Msx-interacting-zinc finger protein)
           (DAB2-interacting protein) (DIP) (Androgen
           receptor-interacting protein 3) (ARIP3)
          Length = 572

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 20  TSCRVKSVSSLDGAAGYXSLGRMMVQWKHTTVSSLGSMHP 139
           +S RV SV+S+D AA   SL    V + HT VSS+ S  P
Sbjct: 510 SSVRVPSVTSVDPAAIPPSLTDYSVPFHHTPVSSMSSDLP 549



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>YHZ2_YEAST (P38878) Hypothetical 32.1 kDa protein in CTF8-EGD2 intergenic|
           region
          Length = 278

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +1

Query: 202 QYVQRDIYLHCDQNLMPRKSSAWSAWNFLGTTSRGFSITYWLNQIQKFESGRPFLVTLNP 381
           Q  Q D+ L   Q+++ +  S  + +  +  T    S TYW     ++   RP+LV    
Sbjct: 32  QIHQLDVALKKSQSILSQWQSNLTFYG-IALTVLALSYTYW-----EYHGYRPYLVVTAL 85

Query: 382 PCVPDHVLLKW 414
            C+   +L KW
Sbjct: 86  LCIGSLILFKW 96



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>QRI7_YEAST (P43122) Putative protease QRI7 (EC 3.4.24.-)|
          Length = 407

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 595 EAHISFQANLEPLLSQTLIRLHGSHDLDMPHRTIFPSFPGS 473
           +AHI  QA + PL  + LI  +    +D+   T  P  PGS
Sbjct: 81  KAHIHHQARIGPLTERALIESNAREGIDLICVTRGPGMPGS 121



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>CAYP2_MOUSE (Q8BUG5) Calcyphosin-2 (Calcyphosine-2)|
          Length = 550

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
 Frame = +1

Query: 85  NDGSVETYDSVIFGVHASNALKLLGAEASHHERRILGACQYVQRDIY-------LHCDQN 243
           +D S+  Y+  +FG + ++ L  +  +  HH+       QY   D+Y       L CDQ 
Sbjct: 253 HDQSLTVYEYRMFGKNRTSVLPFIKKDIYHHQCGRRKGKQYELGDVYTGATLTFLSCDQP 312

Query: 244 LMPR 255
            +P+
Sbjct: 313 SLPK 316


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,119,383
Number of Sequences: 219361
Number of extensions: 2002301
Number of successful extensions: 4528
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4527
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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