ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6n10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 5e-26
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 90 1e-14
4emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC OSJNBb... 90 1e-14
5gb|AY574038.1| Gossypium hirsutum cyclopropane fatty acid syntha... 56 1e-04
6ref|NM_113254.2| Arabidopsis thaliana cyclopropane-fatty-acyl-ph... 54 6e-04
7ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-ph... 54 6e-04
8gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence 54 6e-04
9gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, compl... 54 6e-04
10gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, compl... 54 6e-04
11gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, compl... 54 6e-04
12dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 54 6e-04
13dbj|AK117243.1| Arabidopsis thaliana At3g23510 mRNA for putative... 54 6e-04
14gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, compl... 54 6e-04
15gb|AY574036.1| Gossypium hirsutum cyclopropane fatty acid syntha... 48 0.035
16ref|XM_524253.1| PREDICTED: Pan troglodytes similar to guanyl nu... 42 2.1
17ref|NM_170604.1| Homo sapiens RAS guanyl releasing protein 4 (RA... 42 2.1
18ref|NM_170603.1| Homo sapiens RAS guanyl releasing protein 4 (RA... 42 2.1
19ref|NM_170602.1| Homo sapiens RAS guanyl releasing protein 4 (RA... 42 2.1
20ref|NM_052949.2| Homo sapiens RAS guanyl releasing protein 4 (RA... 42 2.1
21gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, comp... 42 2.1
22gb|AF448437.1| Homo sapiens guanyl nucleotide releasing protein ... 42 2.1
23gb|AY048121.1| Homo sapiens RAS guanyl releasing protein 4 varia... 42 2.1
24gb|AY048120.1| Homo sapiens RAS guanyl releasing protein 4 varia... 42 2.1
25gb|AY048119.1| Homo sapiens RAS guanyl releasing protein 4 (RASG... 42 2.1
26gb|AF470622.1| Sterculia foetida cyclopropane synthase mRNA, com... 42 2.1
27gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Canc... 42 2.1
28gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D... 42 2.1
29gb|AY769950.1| Homo sapiens coagulation factor VIII, procoagulan... 40 8.5
30gb|AY574037.1| Gossypium hirsutum cyclopropane fatty acid syntha... 40 8.5
31gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, comp... 40 8.5
32ref|XM_424068.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
33ref|XM_423993.1| PREDICTED: Gallus gallus similar to RAN binding... 40 8.5
34ref|XM_428037.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
35ref|XM_427216.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
36ref|XM_423154.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
37ref|XM_423110.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
38ref|XM_423099.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
39ref|XM_423030.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
40ref|XM_422872.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
41ref|XM_416929.1| PREDICTED: Gallus gallus similar to Ran-binding... 40 8.5
42ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8... 40 8.5
43emb|CT025637.1| Pan troglodytes chromosome X clone PTB-011B24 ma... 40 8.5
44ref|XM_844143.1| PREDICTED: Canis familiaris similar to protein ... 40 8.5
45emb|AL109837.22|HS1128N12 Human DNA sequence from clone RP5-1128... 40 8.5
46emb|Z98596.1|SPAC14C4 S.pombe chromosome I cosmid c14C4 40 8.5
47gb|AC007110.3| Homo sapiens chromosome 6, clone hRPK.472_J_18, c... 40 8.5
48gb|AC027285.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.5
49dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 8.5
50gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Canc... 40 8.5
51gb|AC163771.5| Pan troglodytes BAC clone CH251-57G17 from chromo... 40 8.5
52emb|BX085194.14| Zebrafish DNA sequence from clone DKEY-242M13, ... 40 8.5
53emb|BX248232.11| Zebrafish DNA sequence from clone CH211-232I5, ... 40 8.5
54gb|AC109993.4| Homo sapiens chromosome X clone RP11-115M6 map q2... 40 8.5
55gb|AC160653.3| Pan troglodytes BAC clone CH251-453K4 from chromo... 40 8.5
56dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07,... 40 8.5
57dbj|AP003125.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.5
58emb|AL645722.2|HSA524G17 Homo sapiens chromosome X clone RP11-52... 40 8.5
59gb|AC144779.3| Mus musculus BAC clone RP23-331N18 from 5, comple... 40 8.5
60dbj|AP006711.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.5
61gb|AC161208.9| Mus musculus chromosome 5, clone RP23-71M14, comp... 40 8.5

>dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H02, full
            insert sequence
          Length = 2846

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Plus

                                                                        
Query: 387  tgttccggatcatgtactacttaaatggaatacaagccttcctgttccgtctgtggccgc 446
            |||||| ||||||||  | ||||| ||||||||||  | |  ||||||| ||||||| ||
Sbjct: 1160 tgttcctgatcatgtgttgcttaagtggaatacaaatcattttgttccgactgtggctgc 1219

                                                                        
Query: 447  ggcgaaggcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtgg 506
              | ||||||| |||| ||||| ||||||||||||| ||||| || ||||||||||| ||
Sbjct: 1220 ttcaaaggcttctcttgagcttgatcagatccagggcaagagaggtatatggttctgcgg 1279

                                                                        
Query: 507  ggcatatcaaggtcatggcttccatgaagacggattaaagtctgggaaagcagcggctca 566
            ||||||||||||   ||||||||||||||| |||||  || |||| |||||||| |||||
Sbjct: 1280 ggcatatcaaggatctggcttccatgaagatggattccaggctggcaaagcagcagctca 1339

                        
Query: 567  aggtttgcttgg 578
            | ||||||||||
Sbjct: 1340 aagtttgcttgg 1351



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                           
Query: 387     tgttccggatcatgtactacttaaatggaatacaagccttcctgttccgtctgtggccgc 446
               |||||| ||||||||  | ||||| ||||||||||  | |  ||||||| ||||||| ||
Sbjct: 9535955 tgttcctgatcatgtgttgcttaagtggaatacaaatcattttgttccgactgtggctgc 9536014

                                                                           
Query: 447     ggcgaaggcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtgg 506
                 | ||||||| |||| ||||| ||||||||||||| ||||| || ||||||||||| ||
Sbjct: 9536015 ttcaaaggcttctcttgagcttgatcagatccagggcaagagaggtatatggttctgcgg 9536074

                            
Query: 507     ggcatatcaaggt 519
               |||||||||||||
Sbjct: 9536075 ggcatatcaaggt 9536087



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                           
Query: 387     tgttccggatcatgtactacttaaatggaatacaagccttcctgttccgtctgtggccgc 446
               |||||| ||||||||  | ||||| ||||||||||  | |  ||||||| ||||||| ||
Sbjct: 9535840 tgttcctgatcatgtgttgcttaagtggaatacaaatcattttgttccgactgtggctgc 9535899

                                                                           
Query: 447     ggcgaaggcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtgg 506
                 | ||||||| |||| ||||| ||||||||||||| ||||| || ||||||||||| ||
Sbjct: 9535900 ttcaaaggcttctcttgagcttgatcagatccagggcaagagaggtatatggttctgcgg 9535959

                            
Query: 507     ggcatatcaaggt 519
               |||||||||||||
Sbjct: 9535960 ggcatatcaaggt 9535972



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>emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC OSJNBb0077C18 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 123766

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                          
Query: 387    tgttccggatcatgtactacttaaatggaatacaagccttcctgttccgtctgtggccgc 446
              |||||| ||||||||  | ||||| ||||||||||  | |  ||||||| ||||||| ||
Sbjct: 121179 tgttcctgatcatgtgttgcttaagtggaatacaaatcattttgttccgactgtggctgc 121238

                                                                          
Query: 447    ggcgaaggcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtgg 506
                | ||||||| |||| ||||| ||||||||||||| ||||| || ||||||||||| ||
Sbjct: 121239 ttcaaaggcttctcttgagcttgatcagatccagggcaagagaggtatatggttctgcgg 121298

                           
Query: 507    ggcatatcaaggt 519
              |||||||||||||
Sbjct: 121299 ggcatatcaaggt 121311



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>gb|AY574038.1| Gossypium hirsutum cyclopropane fatty acid synthase (CPA-FAS-3) mRNA,
            complete cds
          Length = 2912

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                        
Query: 454  gcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtggggcatat 513
            |||| |||| ||||| ||| ||| || || ||||| ||||| ||||| ||||| ||||| 
Sbjct: 1237 gcttctcttgagcttgatcggattcaagggaagagaggaatttggttttgtggagcatac 1296

                                                    
Query: 514  caaggtcatggcttccatgaagacggattaaagtctggga 553
            |  ||  |||||||||||||||| ||||||||| ||||||
Sbjct: 1297 ctgggctatggcttccatgaagatggattaaaggctggga 1336



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 263  cagcatggagtgcgtggaatttccttgg 290
            ||||||||||||| |||||||| |||||
Sbjct: 1043 cagcatggagtgcatggaattttcttgg 1070



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>ref|NM_113254.2| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/
            oxidoreductase AT3G23510 mRNA, complete cds
          Length = 3062

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacgg 539
            |||||||||||||| |||||||| ||  |||| ||||||||||||||
Sbjct: 1477 atatggttctgtggtgcatatcagggctatggtttccatgaagacgg 1523



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>ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/
            oxidoreductase AT3G23530 mRNA, complete cds
          Length = 3148

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551
            |||||||||||||| |||||||| ||  |||| ||||||||||| ||| ||||| ||||
Sbjct: 1498 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1556



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>gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence
          Length = 3084

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551
            |||||||||||||| |||||||| ||  |||| ||||||||||| ||| ||||| ||||
Sbjct: 1472 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1530



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>gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds
          Length = 3149

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551
            |||||||||||||| |||||||| ||  |||| ||||||||||| ||| ||||| ||||
Sbjct: 1498 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1556



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>gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds
          Length = 2988

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551
            |||||||||||||| |||||||| ||  |||| ||||||||||| ||| ||||| ||||
Sbjct: 1417 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1475



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>gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, complete cds
          Length = 2604

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551
            |||||||||||||| |||||||| ||  |||| ||||||||||| ||| ||||| ||||
Sbjct: 1174 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1232



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>dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-10-D10
          Length = 2986

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551
            |||||||||||||| |||||||| ||  |||| ||||||||||| ||| ||||| ||||
Sbjct: 1406 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1464



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>dbj|AK117243.1| Arabidopsis thaliana At3g23510 mRNA for putative
            cyclopropane-fatty-acyl-phospholipid synthase, complete
            cds, clone: RAFL16-79-F04
          Length = 3062

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacgg 539
            |||||||||||||| |||||||| ||  |||| ||||||||||||||
Sbjct: 1477 atatggttctgtggtgcatatcagggctatggtttccatgaagacgg 1523



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>gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, complete cds
          Length = 2604

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493  atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551
            |||||||||||||| |||||||| ||  |||| ||||||||||| ||| ||||| ||||
Sbjct: 1174 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1232



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>gb|AY574036.1| Gossypium hirsutum cyclopropane fatty acid synthase (CPA-FAS-1) mRNA,
            complete cds
          Length = 2884

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 471  tcagatccagggaaagaggggaatatggttctgtgg 506
            |||||| ||||||||||| ||||| |||||||||||
Sbjct: 1178 tcagattcagggaaagagaggaatctggttctgtgg 1213



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>ref|XM_524253.1| PREDICTED: Pan troglodytes similar to guanyl nucleotide releasing
           protein 4 (LOC468867), mRNA
          Length = 2268

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 201 caaggtcatggcttccatgaa 221



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>ref|NM_170604.1| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript
           variant 4, mRNA
          Length = 2436

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 334 caaggtcatggcttccatgaa 354



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>ref|NM_170603.1| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript
           variant 1, mRNA
          Length = 2634

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 334 caaggtcatggcttccatgaa 354



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>ref|NM_170602.1| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript
           variant 2, mRNA
          Length = 2592

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 334 caaggtcatggcttccatgaa 354



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>ref|NM_052949.2| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript
           variant 3, mRNA
          Length = 2749

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 334 caaggtcatggcttccatgaa 354



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>gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, complete sequence
          Length = 237945

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 574    cttggaaagaaatgtgagctt 594
              |||||||||||||||||||||
Sbjct: 225527 cttggaaagaaatgtgagctt 225547



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>gb|AF448437.1| Homo sapiens guanyl nucleotide releasing protein 4 (RASGRP4) mRNA,
           complete cds
          Length = 2293

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 191 caaggtcatggcttccatgaa 211



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>gb|AY048121.1| Homo sapiens RAS guanyl releasing protein 4 variant 2 (RASGRP4)
           mRNA, complete cds
          Length = 2592

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 334 caaggtcatggcttccatgaa 354



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>gb|AY048120.1| Homo sapiens RAS guanyl releasing protein 4 variant 1 (RASGRP4)
           mRNA, complete cds
          Length = 2749

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 334 caaggtcatggcttccatgaa 354



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>gb|AY048119.1| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4) mRNA,
           complete cds
          Length = 2634

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 caaggtcatggcttccatgaa 534
           |||||||||||||||||||||
Sbjct: 334 caaggtcatggcttccatgaa 354



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>gb|AF470622.1| Sterculia foetida cyclopropane synthase mRNA, complete cds
          Length = 2977

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 470  atcagatccagggaaagaggggaatatggttctgtgg 506
            ||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 1240 atcagattcaggggaagagaggaatctggttctgtgg 1276



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>gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166910

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 574   cttggaaagaaatgtgagctt 594
             |||||||||||||||||||||
Sbjct: 41924 cttggaaagaaatgtgagctt 41944



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>gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D23, complete sequence
          Length = 110569

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 514  caaggtcatggcttccatgaa 534
            |||||||||||||||||||||
Sbjct: 8293 caaggtcatggcttccatgaa 8273



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>gb|AY769950.1| Homo sapiens coagulation factor VIII, procoagulant component (hemophilia
              A) (F8) gene, complete cds
          Length = 192029

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    tttctattacttactggcta 327
              ||||||||||||||||||||
Sbjct: 176025 tttctattacttactggcta 176006



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>gb|AY574037.1| Gossypium hirsutum cyclopropane fatty acid synthase (CPA-FAS-2) mRNA,
            complete cds
          Length = 2827

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 471  tcagatccagggaaagaggggaatatggttctgtgg 506
            |||||| ||||| ||||| ||||| |||||||||||
Sbjct: 1161 tcagattcaggggaagagaggaatctggttctgtgg 1196



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>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence
          Length = 176410

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 488 ggggaatatggttctgtggg 507
           ||||||||||||||||||||
Sbjct: 845 ggggaatatggttctgtggg 826



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>ref|XM_424068.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (RanBP2)
           (Nuclear pore complex protein Nup358) (Nucleoporin
           Nup358) (358 kDa nucleoporin) (P270) (LOC426420),
           partial mRNA
          Length = 1290

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 555 atctgtttcaagtcttgatg 536



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>ref|XM_423993.1| PREDICTED: Gallus gallus similar to RAN binding protein 2;
            nucleoporin 358; nuclear pore complex protein Nup358;
            P270 (LOC426333), partial mRNA
          Length = 4449

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   atctgtttcaagtcttgatg 56
            ||||||||||||||||||||
Sbjct: 1167 atctgtttcaagtcttgatg 1148



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>ref|XM_428037.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2
           (LOC430481), partial mRNA
          Length = 1691

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 146 atctgtttcaagtcttgatg 127



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>ref|XM_427216.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2
           (LOC429662), partial mRNA
          Length = 638

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 146 atctgtttcaagtcttgatg 127



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>ref|XM_423154.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2
           (LOC425387), partial mRNA
          Length = 587

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 378 atctgtttcaagtcttgatg 359



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>ref|XM_423110.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2
           (LOC425337), partial mRNA
          Length = 355

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 146 atctgtttcaagtcttgatg 127



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>ref|XM_423099.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2
           (LOC425323), mRNA
          Length = 1397

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 657 atctgtttcaagtcttgatg 638



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>ref|XM_423030.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2
           (LOC425245), partial mRNA
          Length = 6363

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 549 atctgtttcaagtcttgatg 530



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>ref|XM_422872.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2
           (LOC425079), partial mRNA
          Length = 758

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 549 atctgtttcaagtcttgatg 530



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>ref|XM_416929.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2
           (LOC418730), mRNA
          Length = 13296

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  atctgtttcaagtcttgatg 56
           ||||||||||||||||||||
Sbjct: 549 atctgtttcaagtcttgatg 530



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>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X
          Length = 652898

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   tttctattacttactggcta 327
             ||||||||||||||||||||
Sbjct: 14538 tttctattacttactggcta 14557



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>emb|CT025637.1| Pan troglodytes chromosome X clone PTB-011B24 map Xq28, complete sequence
          Length = 261577

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    tttctattacttactggcta 327
              ||||||||||||||||||||
Sbjct: 129018 tttctattacttactggcta 129037



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>ref|XM_844143.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase,
            non-receptor type 14, transcript variant 1 (LOC490293),
            mRNA
          Length = 3564

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 513  tcaaggtcatggcttccatg 532
            ||||||||||||||||||||
Sbjct: 1975 tcaaggtcatggcttccatg 1956



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>emb|AL109837.22|HS1128N12 Human DNA sequence from clone RP5-1128N12 on chromosome 20 Contains the
             PGAM3P gene for phosphoglycerate mutase 3 pseudogene and a
             CpG island, complete sequence
          Length = 139214

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   tcagtatgtccaaagagata 220
             ||||||||||||||||||||
Sbjct: 71588 tcagtatgtccaaagagata 71607



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>emb|Z98596.1|SPAC14C4 S.pombe chromosome I cosmid c14C4
          Length = 36138

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   aattattaggagctgaagca 168
             ||||||||||||||||||||
Sbjct: 21897 aattattaggagctgaagca 21878



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>gb|AC007110.3| Homo sapiens chromosome 6, clone hRPK.472_J_18, complete sequence
          Length = 148336

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gaattctaggtgcctgtcag 204
              ||||||||||||||||||||
Sbjct: 106852 gaattctaggtgcctgtcag 106871



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>gb|AC027285.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-40I5, complete
              sequence
          Length = 241886

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    gtccaaagagatatatacct 227
              ||||||||||||||||||||
Sbjct: 186830 gtccaaagagatatatacct 186811



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>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 460     cttcagcttcatcagatcca 479
               ||||||||||||||||||||
Sbjct: 1236680 cttcagcttcatcagatcca 1236699



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>gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 231946

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    gtccaaagagatatatacct 227
              ||||||||||||||||||||
Sbjct: 127073 gtccaaagagatatatacct 127054



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>gb|AC163771.5| Pan troglodytes BAC clone CH251-57G17 from chromosome unknown, complete
              sequence
          Length = 179603

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    tttctattacttactggcta 327
              ||||||||||||||||||||
Sbjct: 143285 tttctattacttactggcta 143266



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>emb|BX085194.14| Zebrafish DNA sequence from clone DKEY-242M13, complete sequence
          Length = 169865

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 454  gcttatcttcagcttcatcagatc 477
            ||||||||||||||||| ||||||
Sbjct: 2405 gcttatcttcagcttcagcagatc 2382



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>emb|BX248232.11| Zebrafish DNA sequence from clone CH211-232I5, complete sequence
          Length = 152609

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 454   gcttatcttcagcttcatcagatc 477
             ||||||||||||||||| ||||||
Sbjct: 11024 gcttatcttcagcttcagcagatc 11047



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>gb|AC109993.4| Homo sapiens chromosome X clone RP11-115M6 map q28, complete sequence
          Length = 178498

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    tttctattacttactggcta 327
              ||||||||||||||||||||
Sbjct: 163814 tttctattacttactggcta 163833



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>gb|AC160653.3| Pan troglodytes BAC clone CH251-453K4 from chromosome unknown, complete
              sequence
          Length = 178835

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    tttctattacttactggcta 327
              ||||||||||||||||||||
Sbjct: 106011 tttctattacttactggcta 106030



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>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete
              sequences
          Length = 180152

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    attacttactggctaaacca 332
              ||||||||||||||||||||
Sbjct: 132911 attacttactggctaaacca 132892



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>dbj|AP003125.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-642E8, complete
              sequence
          Length = 180711

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    tatcttcagcttcatcagat 476
              ||||||||||||||||||||
Sbjct: 176094 tatcttcagcttcatcagat 176113



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>emb|AL645722.2|HSA524G17 Homo sapiens chromosome X clone RP11-524G17 map Xq28, complete sequence
          Length = 189940

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    tttctattacttactggcta 327
              ||||||||||||||||||||
Sbjct: 145762 tttctattacttactggcta 145743



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>gb|AC144779.3| Mus musculus BAC clone RP23-331N18 from 5, complete sequence
          Length = 168358

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 570   tttgcttggaaagaaatgtgagcttctg 597
             |||| |||||||||||||| ||||||||
Sbjct: 85794 tttgtttggaaagaaatgttagcttctg 85767



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>dbj|AP006711.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09H02, TM0593b,
            complete sequence
          Length = 10381

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 527  tccatgaagacggattaaag 546
            ||||||||||||||||||||
Sbjct: 5666 tccatgaagacggattaaag 5685



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>gb|AC161208.9| Mus musculus chromosome 5, clone RP23-71M14, complete sequence
          Length = 211079

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 488    ggggaatatggttctgtggg 507
              ||||||||||||||||||||
Sbjct: 190956 ggggaatatggttctgtggg 190937


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,595,528
Number of Sequences: 3902068
Number of extensions: 5595528
Number of successful extensions: 101942
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101779
Number of HSP's gapped (non-prelim): 163
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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