| Clone Name | bags6n10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H02, full insert sequence Length = 2846 Score = 127 bits (64), Expect = 5e-26 Identities = 160/192 (83%) Strand = Plus / Plus Query: 387 tgttccggatcatgtactacttaaatggaatacaagccttcctgttccgtctgtggccgc 446 |||||| |||||||| | ||||| |||||||||| | | ||||||| ||||||| || Sbjct: 1160 tgttcctgatcatgtgttgcttaagtggaatacaaatcattttgttccgactgtggctgc 1219 Query: 447 ggcgaaggcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtgg 506 | ||||||| |||| ||||| ||||||||||||| ||||| || ||||||||||| || Sbjct: 1220 ttcaaaggcttctcttgagcttgatcagatccagggcaagagaggtatatggttctgcgg 1279 Query: 507 ggcatatcaaggtcatggcttccatgaagacggattaaagtctgggaaagcagcggctca 566 |||||||||||| ||||||||||||||| ||||| || |||| |||||||| ||||| Sbjct: 1280 ggcatatcaaggatctggcttccatgaagatggattccaggctggcaaagcagcagctca 1339 Query: 567 aggtttgcttgg 578 | |||||||||| Sbjct: 1340 aagtttgcttgg 1351
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 89.7 bits (45), Expect = 1e-14 Identities = 111/133 (83%) Strand = Plus / Plus Query: 387 tgttccggatcatgtactacttaaatggaatacaagccttcctgttccgtctgtggccgc 446 |||||| |||||||| | ||||| |||||||||| | | ||||||| ||||||| || Sbjct: 9535955 tgttcctgatcatgtgttgcttaagtggaatacaaatcattttgttccgactgtggctgc 9536014 Query: 447 ggcgaaggcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtgg 506 | ||||||| |||| ||||| ||||||||||||| ||||| || ||||||||||| || Sbjct: 9536015 ttcaaaggcttctcttgagcttgatcagatccagggcaagagaggtatatggttctgcgg 9536074 Query: 507 ggcatatcaaggt 519 ||||||||||||| Sbjct: 9536075 ggcatatcaaggt 9536087
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 89.7 bits (45), Expect = 1e-14 Identities = 111/133 (83%) Strand = Plus / Plus Query: 387 tgttccggatcatgtactacttaaatggaatacaagccttcctgttccgtctgtggccgc 446 |||||| |||||||| | ||||| |||||||||| | | ||||||| ||||||| || Sbjct: 9535840 tgttcctgatcatgtgttgcttaagtggaatacaaatcattttgttccgactgtggctgc 9535899 Query: 447 ggcgaaggcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtgg 506 | ||||||| |||| ||||| ||||||||||||| ||||| || ||||||||||| || Sbjct: 9535900 ttcaaaggcttctcttgagcttgatcagatccagggcaagagaggtatatggttctgcgg 9535959 Query: 507 ggcatatcaaggt 519 ||||||||||||| Sbjct: 9535960 ggcatatcaaggt 9535972
>emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC OSJNBb0077C18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123766 Score = 89.7 bits (45), Expect = 1e-14 Identities = 111/133 (83%) Strand = Plus / Plus Query: 387 tgttccggatcatgtactacttaaatggaatacaagccttcctgttccgtctgtggccgc 446 |||||| |||||||| | ||||| |||||||||| | | ||||||| ||||||| || Sbjct: 121179 tgttcctgatcatgtgttgcttaagtggaatacaaatcattttgttccgactgtggctgc 121238 Query: 447 ggcgaaggcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtgg 506 | ||||||| |||| ||||| ||||||||||||| ||||| || ||||||||||| || Sbjct: 121239 ttcaaaggcttctcttgagcttgatcagatccagggcaagagaggtatatggttctgcgg 121298 Query: 507 ggcatatcaaggt 519 ||||||||||||| Sbjct: 121299 ggcatatcaaggt 121311
>gb|AY574038.1| Gossypium hirsutum cyclopropane fatty acid synthase (CPA-FAS-3) mRNA, complete cds Length = 2912 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 454 gcttatcttcagcttcatcagatccagggaaagaggggaatatggttctgtggggcatat 513 |||| |||| ||||| ||| ||| || || ||||| ||||| ||||| ||||| ||||| Sbjct: 1237 gcttctcttgagcttgatcggattcaagggaagagaggaatttggttttgtggagcatac 1296 Query: 514 caaggtcatggcttccatgaagacggattaaagtctggga 553 | || |||||||||||||||| ||||||||| |||||| Sbjct: 1297 ctgggctatggcttccatgaagatggattaaaggctggga 1336 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 263 cagcatggagtgcgtggaatttccttgg 290 ||||||||||||| |||||||| ||||| Sbjct: 1043 cagcatggagtgcatggaattttcttgg 1070
>ref|NM_113254.2| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase AT3G23510 mRNA, complete cds Length = 3062 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacgg 539 |||||||||||||| |||||||| || |||| |||||||||||||| Sbjct: 1477 atatggttctgtggtgcatatcagggctatggtttccatgaagacgg 1523
>ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase AT3G23530 mRNA, complete cds Length = 3148 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551 |||||||||||||| |||||||| || |||| ||||||||||| ||| ||||| |||| Sbjct: 1498 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1556
>gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence Length = 3084 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551 |||||||||||||| |||||||| || |||| ||||||||||| ||| ||||| |||| Sbjct: 1472 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1530
>gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds Length = 3149 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551 |||||||||||||| |||||||| || |||| ||||||||||| ||| ||||| |||| Sbjct: 1498 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1556
>gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds Length = 2988 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551 |||||||||||||| |||||||| || |||| ||||||||||| ||| ||||| |||| Sbjct: 1417 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1475
>gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, complete cds Length = 2604 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551 |||||||||||||| |||||||| || |||| ||||||||||| ||| ||||| |||| Sbjct: 1174 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1232
>dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-10-D10 Length = 2986 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551 |||||||||||||| |||||||| || |||| ||||||||||| ||| ||||| |||| Sbjct: 1406 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1464
>dbj|AK117243.1| Arabidopsis thaliana At3g23510 mRNA for putative cyclopropane-fatty-acyl-phospholipid synthase, complete cds, clone: RAFL16-79-F04 Length = 3062 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacgg 539 |||||||||||||| |||||||| || |||| |||||||||||||| Sbjct: 1477 atatggttctgtggtgcatatcagggctatggtttccatgaagacgg 1523
>gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, complete cds Length = 2604 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 493 atatggttctgtggggcatatcaaggtcatggcttccatgaagacggattaaagtctgg 551 |||||||||||||| |||||||| || |||| ||||||||||| ||| ||||| |||| Sbjct: 1174 atatggttctgtggtgcatatcagggctatggtttccatgaagatggactaaaggctgg 1232
>gb|AY574036.1| Gossypium hirsutum cyclopropane fatty acid synthase (CPA-FAS-1) mRNA, complete cds Length = 2884 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 471 tcagatccagggaaagaggggaatatggttctgtgg 506 |||||| ||||||||||| ||||| ||||||||||| Sbjct: 1178 tcagattcagggaaagagaggaatctggttctgtgg 1213
>ref|XM_524253.1| PREDICTED: Pan troglodytes similar to guanyl nucleotide releasing protein 4 (LOC468867), mRNA Length = 2268 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 201 caaggtcatggcttccatgaa 221
>ref|NM_170604.1| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript variant 4, mRNA Length = 2436 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 334 caaggtcatggcttccatgaa 354
>ref|NM_170603.1| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript variant 1, mRNA Length = 2634 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 334 caaggtcatggcttccatgaa 354
>ref|NM_170602.1| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript variant 2, mRNA Length = 2592 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 334 caaggtcatggcttccatgaa 354
>ref|NM_052949.2| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript variant 3, mRNA Length = 2749 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 334 caaggtcatggcttccatgaa 354
>gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, complete sequence Length = 237945 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 574 cttggaaagaaatgtgagctt 594 ||||||||||||||||||||| Sbjct: 225527 cttggaaagaaatgtgagctt 225547
>gb|AF448437.1| Homo sapiens guanyl nucleotide releasing protein 4 (RASGRP4) mRNA, complete cds Length = 2293 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 191 caaggtcatggcttccatgaa 211
>gb|AY048121.1| Homo sapiens RAS guanyl releasing protein 4 variant 2 (RASGRP4) mRNA, complete cds Length = 2592 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 334 caaggtcatggcttccatgaa 354
>gb|AY048120.1| Homo sapiens RAS guanyl releasing protein 4 variant 1 (RASGRP4) mRNA, complete cds Length = 2749 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 334 caaggtcatggcttccatgaa 354
>gb|AY048119.1| Homo sapiens RAS guanyl releasing protein 4 (RASGRP4) mRNA, complete cds Length = 2634 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 334 caaggtcatggcttccatgaa 354
>gb|AF470622.1| Sterculia foetida cyclopropane synthase mRNA, complete cds Length = 2977 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 470 atcagatccagggaaagaggggaatatggttctgtgg 506 ||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1240 atcagattcaggggaagagaggaatctggttctgtgg 1276
>gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166910 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 574 cttggaaagaaatgtgagctt 594 ||||||||||||||||||||| Sbjct: 41924 cttggaaagaaatgtgagctt 41944
>gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D23, complete sequence Length = 110569 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 514 caaggtcatggcttccatgaa 534 ||||||||||||||||||||| Sbjct: 8293 caaggtcatggcttccatgaa 8273
>gb|AY769950.1| Homo sapiens coagulation factor VIII, procoagulant component (hemophilia A) (F8) gene, complete cds Length = 192029 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tttctattacttactggcta 327 |||||||||||||||||||| Sbjct: 176025 tttctattacttactggcta 176006
>gb|AY574037.1| Gossypium hirsutum cyclopropane fatty acid synthase (CPA-FAS-2) mRNA, complete cds Length = 2827 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 471 tcagatccagggaaagaggggaatatggttctgtgg 506 |||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1161 tcagattcaggggaagagaggaatctggttctgtgg 1196
>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence Length = 176410 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ggggaatatggttctgtggg 507 |||||||||||||||||||| Sbjct: 845 ggggaatatggttctgtggg 826
>ref|XM_424068.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270) (LOC426420), partial mRNA Length = 1290 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 555 atctgtttcaagtcttgatg 536
>ref|XM_423993.1| PREDICTED: Gallus gallus similar to RAN binding protein 2; nucleoporin 358; nuclear pore complex protein Nup358; P270 (LOC426333), partial mRNA Length = 4449 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 1167 atctgtttcaagtcttgatg 1148
>ref|XM_428037.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (LOC430481), partial mRNA Length = 1691 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 146 atctgtttcaagtcttgatg 127
>ref|XM_427216.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (LOC429662), partial mRNA Length = 638 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 146 atctgtttcaagtcttgatg 127
>ref|XM_423154.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (LOC425387), partial mRNA Length = 587 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 378 atctgtttcaagtcttgatg 359
>ref|XM_423110.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (LOC425337), partial mRNA Length = 355 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 146 atctgtttcaagtcttgatg 127
>ref|XM_423099.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (LOC425323), mRNA Length = 1397 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 657 atctgtttcaagtcttgatg 638
>ref|XM_423030.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (LOC425245), partial mRNA Length = 6363 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 549 atctgtttcaagtcttgatg 530
>ref|XM_422872.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (LOC425079), partial mRNA Length = 758 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 549 atctgtttcaagtcttgatg 530
>ref|XM_416929.1| PREDICTED: Gallus gallus similar to Ran-binding protein 2 (LOC418730), mRNA Length = 13296 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atctgtttcaagtcttgatg 56 |||||||||||||||||||| Sbjct: 549 atctgtttcaagtcttgatg 530
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X Length = 652898 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tttctattacttactggcta 327 |||||||||||||||||||| Sbjct: 14538 tttctattacttactggcta 14557
>emb|CT025637.1| Pan troglodytes chromosome X clone PTB-011B24 map Xq28, complete sequence Length = 261577 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tttctattacttactggcta 327 |||||||||||||||||||| Sbjct: 129018 tttctattacttactggcta 129037
>ref|XM_844143.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase, non-receptor type 14, transcript variant 1 (LOC490293), mRNA Length = 3564 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 tcaaggtcatggcttccatg 532 |||||||||||||||||||| Sbjct: 1975 tcaaggtcatggcttccatg 1956
>emb|AL109837.22|HS1128N12 Human DNA sequence from clone RP5-1128N12 on chromosome 20 Contains the PGAM3P gene for phosphoglycerate mutase 3 pseudogene and a CpG island, complete sequence Length = 139214 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 tcagtatgtccaaagagata 220 |||||||||||||||||||| Sbjct: 71588 tcagtatgtccaaagagata 71607
>emb|Z98596.1|SPAC14C4 S.pombe chromosome I cosmid c14C4 Length = 36138 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aattattaggagctgaagca 168 |||||||||||||||||||| Sbjct: 21897 aattattaggagctgaagca 21878
>gb|AC007110.3| Homo sapiens chromosome 6, clone hRPK.472_J_18, complete sequence Length = 148336 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gaattctaggtgcctgtcag 204 |||||||||||||||||||| Sbjct: 106852 gaattctaggtgcctgtcag 106871
>gb|AC027285.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-40I5, complete sequence Length = 241886 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtccaaagagatatatacct 227 |||||||||||||||||||| Sbjct: 186830 gtccaaagagatatatacct 186811
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 cttcagcttcatcagatcca 479 |||||||||||||||||||| Sbjct: 1236680 cttcagcttcatcagatcca 1236699
>gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231946 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtccaaagagatatatacct 227 |||||||||||||||||||| Sbjct: 127073 gtccaaagagatatatacct 127054
>gb|AC163771.5| Pan troglodytes BAC clone CH251-57G17 from chromosome unknown, complete sequence Length = 179603 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tttctattacttactggcta 327 |||||||||||||||||||| Sbjct: 143285 tttctattacttactggcta 143266
>emb|BX085194.14| Zebrafish DNA sequence from clone DKEY-242M13, complete sequence Length = 169865 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 gcttatcttcagcttcatcagatc 477 ||||||||||||||||| |||||| Sbjct: 2405 gcttatcttcagcttcagcagatc 2382
>emb|BX248232.11| Zebrafish DNA sequence from clone CH211-232I5, complete sequence Length = 152609 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 gcttatcttcagcttcatcagatc 477 ||||||||||||||||| |||||| Sbjct: 11024 gcttatcttcagcttcagcagatc 11047
>gb|AC109993.4| Homo sapiens chromosome X clone RP11-115M6 map q28, complete sequence Length = 178498 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tttctattacttactggcta 327 |||||||||||||||||||| Sbjct: 163814 tttctattacttactggcta 163833
>gb|AC160653.3| Pan troglodytes BAC clone CH251-453K4 from chromosome unknown, complete sequence Length = 178835 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tttctattacttactggcta 327 |||||||||||||||||||| Sbjct: 106011 tttctattacttactggcta 106030
>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete sequences Length = 180152 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 attacttactggctaaacca 332 |||||||||||||||||||| Sbjct: 132911 attacttactggctaaacca 132892
>dbj|AP003125.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-642E8, complete sequence Length = 180711 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 tatcttcagcttcatcagat 476 |||||||||||||||||||| Sbjct: 176094 tatcttcagcttcatcagat 176113
>emb|AL645722.2|HSA524G17 Homo sapiens chromosome X clone RP11-524G17 map Xq28, complete sequence Length = 189940 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tttctattacttactggcta 327 |||||||||||||||||||| Sbjct: 145762 tttctattacttactggcta 145743
>gb|AC144779.3| Mus musculus BAC clone RP23-331N18 from 5, complete sequence Length = 168358 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 570 tttgcttggaaagaaatgtgagcttctg 597 |||| |||||||||||||| |||||||| Sbjct: 85794 tttgtttggaaagaaatgttagcttctg 85767
>dbj|AP006711.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09H02, TM0593b, complete sequence Length = 10381 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 tccatgaagacggattaaag 546 |||||||||||||||||||| Sbjct: 5666 tccatgaagacggattaaag 5685
>gb|AC161208.9| Mus musculus chromosome 5, clone RP23-71M14, complete sequence Length = 211079 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ggggaatatggttctgtggg 507 |||||||||||||||||||| Sbjct: 190956 ggggaatatggttctgtggg 190937 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,595,528 Number of Sequences: 3902068 Number of extensions: 5595528 Number of successful extensions: 101942 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101779 Number of HSP's gapped (non-prelim): 163 length of query: 621 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 598 effective length of database: 17,143,297,704 effective search space: 10251692026992 effective search space used: 10251692026992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)