Clone Name	bags7c04
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AF498270.1| Haynaldia villosa clone kong36 mRNA	369	3e-99
2	ref|XM_465274.1| Oryza sativa (japonica cultivar-group), mRNA	174	9e-41
3	dbj|AK068494.1| Oryza sativa (japonica cultivar-group) cDNA clon...	174	9e-41
4	gb|AY107525.1| Zea mays PCO115693 mRNA sequence	123	3e-25
5	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	92	1e-15
6	dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D...	92	1e-15
7	gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, comp...	44	0.21
8	emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on ch...	44	0.21
9	ref|XM_637845.1| Dictyostelium discoideum hypothetical protein (...	42	0.85
10	ref|XM_634161.1| Dictyostelium discoideum hypothetical protein (...	42	0.85
11	emb|BX571861.1| Photorhabdus luminescens subsp. laumondii TTO1 c...	42	0.85
12	emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 c...	42	0.85
13	gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047...	42	0.85
14	emb|X71654.1|SMCYP71B3 S.melongena CYP71A2 mRNA for hydroxylase	42	0.85
15	dbj|D14990.1|POTCPEG4 Eggplant mRNA for cytochrome P-450EG4, com...	42	0.85
16	ref|NM_100363.2| Arabidopsis thaliana nucleic acid binding / zin...	40	3.4
17	gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, com...	40	3.4
18	gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, co...	40	3.4
19	gb|AC124495.2| Mus musculus BAC clone RP23-468F5 from chromosome...	40	3.4
20	gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosom...	40	3.4
21	gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, c...	40	3.4
22	emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chr...	40	3.4
23	emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on ch...	40	3.4
24	ref|XM_971279.1| PREDICTED: Tribolium castaneum hypothetical pro...	40	3.4
25	emb|Z25420.1|GDINCENPB G.domesticus class II INCENP protein mRNA...	40	3.4
26	emb|Z25419.1|GDINCENPA G.domesticus class I INCENP protein mRNA,...	40	3.4
27	gb|BT000147.1| Arabidopsis thaliana Unknown protein (At1g04850) ...	40	3.4
28	emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 c...	40	3.4
29	gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome...	40	3.4
30	ref|NM_205330.1| Gallus gallus inner centromere protein antigens...	40	3.4
31	gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete se...	40	3.4
32	ref|XM_692368.1| PREDICTED: Danio rerio similar to UPF2 regulato...	40	3.4
33	gb|AY062609.1| Arabidopsis thaliana Unknown protein (F13M7.16) m...	40	3.4
34	gb|DQ067256.1| Viola pubescens var. scabriuscula clone Vpub-11 m...	40	3.4
35	emb|BX818444.1|CNS0AE4O Arabidopsis thaliana Full-length cDNA Co...	40	3.4
36	gb|AC158517.1| Mus musculus BAC clone RP24-114B19 from chromosom...	40	3.4
37	gb|AY088435.1| Arabidopsis thaliana clone 6672 mRNA, complete se...	40	3.4
38	gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 ...	40	3.4
39	gb|AC097103.8| Homo sapiens 3 BAC RP11-319G6 (Roswell Park Cance...	40	3.4
40	gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, co...	40	3.4
41	gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, com...	40	3.4
42	emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chr...	40	3.4
43	emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chro...	40	3.4
44	emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chr...	40	3.4
45	emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chro...	40	3.4
46	emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chr...	40	3.4

---

>gb|AF498270.1| Haynaldia villosa clone kong36 mRNA
          Length = 1083

 Score =  369 bits (186), Expect = 3e-99
 Identities = 222/237 (93%)
 Strand = Plus / Plus

                                                                       
Query: 23  tgaaatcaccatgtngccagcatgagatagtcatacntacggacccgaagaacactgagt 82
           |||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 15  tgaaatcaccatgttgccagcatgagatagtcatacatacggacccgaagaatactgagt 74

                                                                       
Query: 83  atgttatnnncagtggagctcacnggaagactgaagattttgatgttgaagatgcagaga 142
           |||||||   |||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 75  atgttataatcagtggggctcagcggaagactgaagatttcgatgttgaagatgcagaga 134

                                                                       
Query: 143 cgctcctgctccctgcggatgaagaaagagacaagctngcggatnctatgtntaagctcg 202
           ||||||||||||||||||||||||||||||||||||| |||||| | |||| |||||| |
Sbjct: 135 cgctcctgctccctgcggatgaagaaagagacaagcttgcggatcccatgtataagcttg 194

                                                                    
Query: 203 aacaccagggagaggatattcggaagaagaaagaagaggagcctgttttagttcggc 259
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aacaccagggagaggatattcggaagaagaaagaagaggagcctgttttagttcggc 251

---

>ref|XM_465274.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1323

 Score =  174 bits (88), Expect = 9e-41
 Identities = 208/251 (82%)
 Strand = Plus / Plus

                                                                       
Query: 7   atatggagcttcagtatgaaatcaccatgtngccagcatgagatagtcatacntacggac 66
           |||||||||||||  ||||||||||||||  || | || || ||||| ||||  || |||
Sbjct: 404 atatggagcttcaccatgaaatcaccatgctgcaaacaagaaatagttatacaaacagac 463

                                                                       
Query: 67  ccgaagaacactgagtatgttatnnncagtggagctcacnggaagactgaagattttgat 126
           || ||||| |||||||| || ||    |||||||||||  | ||||||||||||| ||||
Sbjct: 464 ccaaagaatactgagtacgtcataattagtggagctcaacgaaagactgaagattatgat 523

                                                                       
Query: 127 gttgaagatgcagagacgctcctgctccctgcggatgaagaaagagacaagctngcggat 186
           || || ||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 524 gtggaggatgcagagacactactgctacctgcagatgaagaaagagacaagcttgcggat 583

                                                                       
Query: 187 nctatgtntaagctcgaacaccagggagaggatattcggaagaagaaagaagaggagcct 246
            |||||| |||||| |||||||||| ||||||| ||   |||||||||||||  || || 
Sbjct: 584 cctatgtataagcttgaacaccaggaagaggatcttaaaaagaagaaagaagctgaacca 643

                      
Query: 247 gttttagttcg 257
           |||||||||||
Sbjct: 644 gttttagttcg 654

---

>dbj|AK068494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156M22, full
           insert sequence
          Length = 1323

 Score =  174 bits (88), Expect = 9e-41
 Identities = 208/251 (82%)
 Strand = Plus / Plus

                                                                       
Query: 7   atatggagcttcagtatgaaatcaccatgtngccagcatgagatagtcatacntacggac 66
           |||||||||||||  ||||||||||||||  || | || || ||||| ||||  || |||
Sbjct: 404 atatggagcttcaccatgaaatcaccatgctgcaaacaagaaatagttatacaaacagac 463

                                                                       
Query: 67  ccgaagaacactgagtatgttatnnncagtggagctcacnggaagactgaagattttgat 126
           || ||||| |||||||| || ||    |||||||||||  | ||||||||||||| ||||
Sbjct: 464 ccaaagaatactgagtacgtcataattagtggagctcaacgaaagactgaagattatgat 523

                                                                       
Query: 127 gttgaagatgcagagacgctcctgctccctgcggatgaagaaagagacaagctngcggat 186
           || || ||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 524 gtggaggatgcagagacactactgctacctgcagatgaagaaagagacaagcttgcggat 583

                                                                       
Query: 187 nctatgtntaagctcgaacaccagggagaggatattcggaagaagaaagaagaggagcct 246
            |||||| |||||| |||||||||| ||||||| ||   |||||||||||||  || || 
Sbjct: 584 cctatgtataagcttgaacaccaggaagaggatcttaaaaagaagaaagaagctgaacca 643

                      
Query: 247 gttttagttcg 257
           |||||||||||
Sbjct: 644 gttttagttcg 654

---

>gb|AY107525.1| Zea mays PCO115693 mRNA sequence
          Length = 726

 Score =  123 bits (62), Expect = 3e-25
 Identities = 122/143 (85%)
 Strand = Plus / Plus

                                                                       
Query: 115 gaagattttgatgttgaagatgcagagacgctcctgctccctgcggatgaagaaagagac 174
           ||||||||||||||||| |||||||||||  | ||||| || || ||||||||  |||||
Sbjct: 12  gaagattttgatgttgaggatgcagagacattgctgctgccagcagatgaagatcgagac 71

                                                                       
Query: 175 aagctngcggatnctatgtntaagctcgaacaccagggagaggatattcggaagaagaaa 234
           ||||| |||||| |||||| |  ||| |||||||||| ||||||| |||||||||| |||
Sbjct: 72  aagcttgcggatcctatgtatcggcttgaacaccaggaagaggatcttcggaagaaaaaa 131

                                  
Query: 235 gaagaggagcctgttttagttcg 257
           ||||  ||||| |||||||||||
Sbjct: 132 gaagctgagccagttttagttcg 154

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 130/160 (81%)
 Strand = Plus / Plus

                                                                            
Query: 7        atatggagcttcagtatgaaatcaccatgtngccagcatgagatagtcatacntacggac 66
                |||||||||||||  ||||||||||||||  || | || || ||||| ||||  || |||
Sbjct: 13011044 atatggagcttcaccatgaaatcaccatgctgcaaacaagaaatagttatacaaacagac 13011103

                                                                            
Query: 67       ccgaagaacactgagtatgttatnnncagtggagctcacnggaagactgaagattttgat 126
                || ||||| |||||||| || ||    |||||||||||  | ||||||||||||| ||||
Sbjct: 13011104 ccaaagaatactgagtacgtcataattagtggagctcaacgaaagactgaagattatgat 13011163

                                                        
Query: 127      gttgaagatgcagagacgctcctgctccctgcggatgaag 166
                || || ||||||||||| || ||||| ||||| |||||||
Sbjct: 13011164 gtggaggatgcagagacactactgctacctgcagatgaag 13011203



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                            
Query: 165      agaaagagacaagctngcggatnctatgtntaagctcgaacaccagggagaggatattcg 224
                ||||||||||||||| |||||| |||||| |||||| |||||||||| ||||||| ||  
Sbjct: 13011293 agaaagagacaagcttgcggatcctatgtataagcttgaacaccaggaagaggatcttaa 13011352

                                                 
Query: 225      gaagaagaaagaagaggagcctgttttagttcg 257
                 |||||||||||||  || || |||||||||||
Sbjct: 13011353 aaagaagaaagaagctgaaccagttttagttcg 13011385

---

>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0688H12
          Length = 139279

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 130/160 (81%)
 Strand = Plus / Plus

                                                                          
Query: 7      atatggagcttcagtatgaaatcaccatgtngccagcatgagatagtcatacntacggac 66
              |||||||||||||  ||||||||||||||  || | || || ||||| ||||  || |||
Sbjct: 120687 atatggagcttcaccatgaaatcaccatgctgcaaacaagaaatagttatacaaacagac 120746

                                                                          
Query: 67     ccgaagaacactgagtatgttatnnncagtggagctcacnggaagactgaagattttgat 126
              || ||||| |||||||| || ||    |||||||||||  | ||||||||||||| ||||
Sbjct: 120747 ccaaagaatactgagtacgtcataattagtggagctcaacgaaagactgaagattatgat 120806

                                                      
Query: 127    gttgaagatgcagagacgctcctgctccctgcggatgaag 166
              || || ||||||||||| || ||||| ||||| |||||||
Sbjct: 120807 gtggaggatgcagagacactactgctacctgcagatgaag 120846



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                          
Query: 165    agaaagagacaagctngcggatnctatgtntaagctcgaacaccagggagaggatattcg 224
              ||||||||||||||| |||||| |||||| |||||| |||||||||| ||||||| ||  
Sbjct: 120936 agaaagagacaagcttgcggatcctatgtataagcttgaacaccaggaagaggatcttaa 120995

                                               
Query: 225    gaagaagaaagaagaggagcctgttttagttcg 257
               |||||||||||||  || || |||||||||||
Sbjct: 120996 aaagaagaaagaagctgaaccagttttagttcg 121028

---

>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence
          Length = 224790

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 224    ggaagaagaaagaagaggagcctgtt 249
              ||||||||||||||||||||| ||||
Sbjct: 124301 ggaagaagaaagaagaggagcgtgtt 124326

---

>emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on chromosome 3, complete
             sequence
          Length = 106019

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 224   ggaagaagaaagaagaggagcctgtt 249
             ||||||||||||||||||||| ||||
Sbjct: 86629 ggaagaagaaagaagaggagcgtgtt 86654

---

>ref|XM_637845.1| Dictyostelium discoideum hypothetical protein (DDB0217899), partial
           mRNA
          Length = 1077

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 gattttgatgttgaagatgca 138
           |||||||||||||||||||||
Sbjct: 379 gattttgatgttgaagatgca 399

---

>ref|XM_634161.1| Dictyostelium discoideum hypothetical protein (DDB0185375), partial
           mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 gattttgatgttgaagatgca 138
           |||||||||||||||||||||
Sbjct: 757 gattttgatgttgaagatgca 777

---

>emb|BX571861.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              3/17
          Length = 342905

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 120    ttttgatgttgaagatgcagagacg 144
              |||||||||||||| ||||||||||
Sbjct: 256823 ttttgatgttgaaggtgcagagacg 256799



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 120    ttttgatgttgaagatgcagagacg 144
              |||||||||||||| ||||||||||
Sbjct: 251813 ttttgatgttgaaggtgcagagacg 251789

---

>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              2/17
          Length = 349287

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 120    ttttgatgttgaagatgcagagacg 144
              |||||||||||||| ||||||||||
Sbjct: 149845 ttttgatgttgaaggtgcagagacg 149869



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 120    ttttgatgttgaagatgcagagacg 144
              |||||||||||||| ||||||||||
Sbjct: 148662 ttttgatgttgaaggtgcagagacg 148686

---

>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4,
              complete sequence
          Length = 254733

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 118    gattttgatgttgaagatgca 138
              |||||||||||||||||||||
Sbjct: 175543 gattttgatgttgaagatgca 175523

---

>emb|X71654.1|SMCYP71B3 S.melongena CYP71A2 mRNA for hydroxylase
          Length = 1747

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 219 tattcggaagaagaaagaaga 239
           |||||||||||||||||||||
Sbjct: 812 tattcggaagaagaaagaaga 832

---

>dbj|D14990.1|POTCPEG4 Eggplant mRNA for cytochrome P-450EG4, complete cds
          Length = 1744

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 219 tattcggaagaagaaagaaga 239
           |||||||||||||||||||||
Sbjct: 812 tattcggaagaagaaagaaga 832

---

>ref|NM_100363.2| Arabidopsis thaliana nucleic acid binding / zinc ion binding
           AT1G04850 mRNA, complete cds
          Length = 1521

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cggaagaagaaagaagagga 242
           ||||||||||||||||||||
Sbjct: 664 cggaagaagaaagaagagga 683

---

>gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, complete sequence
          Length = 213778

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 24796 ggaagaagaaagaagaggag 24777

---

>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence
          Length = 166568

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    ggaagaagaaagaagaggag 243
              ||||||||||||||||||||
Sbjct: 130898 ggaagaagaaagaagaggag 130917

---

>gb|AC124495.2| Mus musculus BAC clone RP23-468F5 from chromosome 1, complete sequence
          Length = 182578

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 76029 ggaagaagaaagaagaggag 76048

---

>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence
          Length = 205684

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    ctgaagattttgatgttgaa 132
              ||||||||||||||||||||
Sbjct: 181035 ctgaagattttgatgttgaa 181016

---

>gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, complete sequence
          Length = 238516

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 98864 ggaagaagaaagaagaggag 98883

---

>emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chromosome 9 Contains the
            5' end of a novel gene, complete sequence
          Length = 165517

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  ggaagaagaaagaagaggag 243
            ||||||||||||||||||||
Sbjct: 9198 ggaagaagaaagaagaggag 9179

---

>emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on chromosome 9 Contains the
             5' end of the NTRK2 gene for Neurotrophic tyrosine kinase,
             receptor, type 2 (TRKB) and a CpG island, complete
             sequence
          Length = 182914

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 78887 ggaagaagaaagaagaggag 78868

---

>ref|XM_971279.1| PREDICTED: Tribolium castaneum hypothetical protein LOC661110
           (LOC661110), mRNA
          Length = 627

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 ggaagaagaaagaagaggag 243
           ||||||||||||||||||||
Sbjct: 217 ggaagaagaaagaagaggag 236



 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 ggaagaagaaagaagaggag 243
           ||||||||||||||||||||
Sbjct: 33  ggaagaagaaagaagaggag 52

---

>emb|Z25420.1|GDINCENPB G.domesticus class II INCENP protein mRNA, complete CDS
          Length = 4354

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  gaagaagaaagaagaggagc 244
            ||||||||||||||||||||
Sbjct: 1935 gaagaagaaagaagaggagc 1954

---

>emb|Z25419.1|GDINCENPA G.domesticus class I INCENP protein mRNA, complete CDS
          Length = 4481

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  gaagaagaaagaagaggagc 244
            ||||||||||||||||||||
Sbjct: 1935 gaagaagaaagaagaggagc 1954

---

>gb|BT000147.1| Arabidopsis thaliana Unknown protein (At1g04850) mRNA, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cggaagaagaaagaagagga 242
           ||||||||||||||||||||
Sbjct: 577 cggaagaagaaagaagagga 596

---

>emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             6/17
          Length = 349071

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   ttttgatgttgaagatgcagagac 143
             |||||||||||||| |||||||||
Sbjct: 52290 ttttgatgttgaaggtgcagagac 52313

---

>gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome 3, complete sequence
          Length = 209458

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 37180 ggaagaagaaagaagaggag 37161

---

>ref|NM_205330.1| Gallus gallus inner centromere protein antigens 135/155kDa (INCENP),
            mRNA
          Length = 4481

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  gaagaagaaagaagaggagc 244
            ||||||||||||||||||||
Sbjct: 1935 gaagaagaaagaagaggagc 1954

---

>gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete sequence
          Length = 206400

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    ggaagaagaaagaagaggag 243
              ||||||||||||||||||||
Sbjct: 165392 ggaagaagaaagaagaggag 165411



 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    ggaagaagaaagaagaggag 243
              ||||||||||||||||||||
Sbjct: 165367 ggaagaagaaagaagaggag 165386

---

>ref|XM_692368.1| PREDICTED: Danio rerio similar to UPF2 regulator of nonsense
           transcripts homolog (LOC569006), partial mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 ggaagaagaaagaagaggag 243
           ||||||||||||||||||||
Sbjct: 212 ggaagaagaaagaagaggag 231

---

>gb|AY062609.1| Arabidopsis thaliana Unknown protein (F13M7.16) mRNA, complete cds
          Length = 1412

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cggaagaagaaagaagagga 242
           ||||||||||||||||||||
Sbjct: 610 cggaagaagaaagaagagga 629

---

>gb|DQ067256.1| Viola pubescens var. scabriuscula clone Vpub-11 microsatellite
           sequence
          Length = 581

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggaagaagaaagaagaggag 243
           ||||||||||||||||||||
Sbjct: 290 ggaagaagaaagaagaggag 271

---

>emb|BX818444.1|CNS0AE4O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1464

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cggaagaagaaagaagagga 242
           ||||||||||||||||||||
Sbjct: 642 cggaagaagaaagaagagga 661

---

>gb|AC158517.1| Mus musculus BAC clone RP24-114B19 from chromosome 12, complete
             sequence
          Length = 168486

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ctgaagattttgatgttgaa 132
             ||||||||||||||||||||
Sbjct: 99669 ctgaagattttgatgttgaa 99688

---

>gb|AY088435.1| Arabidopsis thaliana clone 6672 mRNA, complete sequence
          Length = 1519

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cggaagaagaaagaagagga 242
           ||||||||||||||||||||
Sbjct: 664 cggaagaagaaagaagagga 683

---

>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence
          Length = 89713

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   cggaagaagaaagaagagga 242
             ||||||||||||||||||||
Sbjct: 55944 cggaagaagaaagaagagga 55963

---

>gb|AC097103.8| Homo sapiens 3 BAC RP11-319G6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87000

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 62324 ggaagaagaaagaagaggag 62343

---

>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence
          Length = 178509

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    ggaagaagaaagaagaggag 243
              ||||||||||||||||||||
Sbjct: 112645 ggaagaagaaagaagaggag 112664

---

>gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, complete sequence
          Length = 184206

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 45102 ggaagaagaaagaagaggag 45083

---

>emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chromosome 2, complete
             sequence
          Length = 191379

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 12490 ggaagaagaaagaagaggag 12471

---

>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete
              sequence
          Length = 243114

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    ggaagaagaaagaagaggag 243
              ||||||||||||||||||||
Sbjct: 175948 ggaagaagaaagaagaggag 175929

---

>emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chromosome X, complete
            sequence
          Length = 208695

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  ggaagaagaaagaagaggag 243
            ||||||||||||||||||||
Sbjct: 5692 ggaagaagaaagaagaggag 5673

---

>emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chromosome 2, complete
             sequence
          Length = 189540

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   ggaagaagaaagaagaggag 243
             ||||||||||||||||||||
Sbjct: 20195 ggaagaagaaagaagaggag 20214

---

>emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chromosome 4, complete
             sequence
          Length = 212360

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gaagaagaaagaagaggagc 244
             ||||||||||||||||||||
Sbjct: 75772 gaagaagaaagaagaggagc 75791


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,537,026
Number of Sequences: 3902068
Number of extensions: 2537026
Number of successful extensions: 78341
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78241
Number of HSP's gapped (non-prelim): 100
length of query: 259
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 237
effective length of database: 17,147,199,772
effective search space: 4063886345964
effective search space used: 4063886345964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---