ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6n04 |
|---|---|
| Clone Library Name | barley_pub |
>PA2G4_HUMAN (Q9UQ80) Proliferation-associated protein 2G4 (Cell cycle protein| p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1) Length = 393 Score = 95.9 bits (237), Expect = 8e-20 Identities = 54/117 (46%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Frame = +3 Query: 129 KFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSD 305 +F MPFT RA E EK+AR+G+VEC HELLQP+ VL+EK+G+ VA KFTVLLMPNG Sbjct: 271 RFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPM 330 Query: 306 KITSHPLQ-QLEPSKSIEDDAEIKAWLALGTKSXXXXXXXXXXXXXXDAAEAAEPME 473 +ITS P + L S+ DAE+KA L + A + E +E Sbjct: 331 RITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLE 387
>PA2G4_MOUSE (P50580) Proliferation-associated protein 2G4| (Proliferation-associated protein 1) (Protein p38-2G4) (Mpp1) (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) Length = 393 Score = 95.5 bits (236), Expect = 1e-19 Identities = 54/117 (46%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Frame = +3 Query: 129 KFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSD 305 +F MPFT RA E EK+AR+G+VEC HELLQP+ VL+EK+G+ VA KFTVLLMPNG Sbjct: 271 RFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPM 330 Query: 306 KITSHPLQ-QLEPSKSIEDDAEIKAWLALGTKSXXXXXXXXXXXXXXDAAEAAEPME 473 +ITS P + L S+ DAE+KA L + A + E +E Sbjct: 331 RITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTVENATSGETLE 387
>CDB4_SCHPO (Q09184) Curved DNA-binding protein (42 kDa protein)| Length = 381 Score = 50.8 bits (120), Expect = 3e-06 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Frame = +3 Query: 120 LAXKFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPN 296 + KF PF+ R + + R +GL EC +H+LL PY VL +K G +VA T+ L Sbjct: 271 IQTKFGPFPFSTRNISFDSRTNMGLNECTSHKLLFPYEVLLDKDGGIVAEFYSTIALTKK 330 Query: 297 GSDKIT-SHPLQQLEPSKSIEDDAEIKAWL 383 G+ ++ S P + S +D EI A L Sbjct: 331 GTIILSDSEPKEDFIKSDKKVEDPEIVALL 360
>ARX1_SCHPO (O60180) Probable metalloprotease arx1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 417 Score = 38.1 bits (87), Expect = 0.020 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Frame = +3 Query: 138 IMPFTARALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKI-- 311 + PF +L +R LGL E + +L P PVL +++A + TV+ PN S + Sbjct: 318 VFPFHFGSLSSERNLLGLRELTDRHILVPMPVLISSPSNVIAREELTVITQPNPSSDLLC 377 Query: 312 --TSHPLQQLEPSKSIEDDAE 368 P ++ S+ED + Sbjct: 378 LTVPTPPSYVKSDFSLEDGTD 398
>AMPM_METJA (Q58725) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 294 Score = 37.7 bits (86), Expect = 0.026 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +3 Query: 120 LAXKFPIMPFTAR-ALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPN 296 ++ +P +PF R L+ + RL L + + YP+L E++ +V + T+L+ N Sbjct: 228 ISKNYPYLPFAERWVLKNESERLALNSLIRASCIYGYPILKERENGIVGQAEHTILITEN 287 Query: 297 GSDKIT 314 G + T Sbjct: 288 GVEITT 293
>AMPM2_ENCIN (Q6XMH7) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +3 Query: 132 FPIMPFTARALEEKR-ARLGLVECMN----HELLQPYPVLHEKQGDLVAHIKFTVLLMPN 296 F +PF+ R L+ G ++ +N L PYP L++ G VA + TV L N Sbjct: 288 FGTLPFSPRHLDHYNLVEGGSLKSVNLLTMMGLFTPYPPLNDIDGSKVAQFEHTVYLSEN 347 Query: 297 GSDKIT 314 G + +T Sbjct: 348 GKEILT 353
>AMPM2_YEAST (P38174) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) Length = 421 Score = 30.8 bits (68), Expect = 3.2 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Frame = +3 Query: 132 FPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLL 287 F +PF R L+ +++ L + H L+Q YP L++ G A + T+LL Sbjct: 353 FGTLPFCRRYLDRLGQEKYLFALNNLVRHGLVQDYPPLNDIPGSYTAQFEHTILL 407
>AMP2B_ARATH (Q56Y85) Methionine aminopeptidase 2B (EC 3.4.11.18) (MetAP 2B)| (MAP 2B) (Peptidase M 2B) Length = 439 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = +3 Query: 132 FPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMP 293 F + F R L+ E + + L + ++QPYP L + +G V+ + T+LL P Sbjct: 371 FSTLAFCRRYLDRIGETKYLMALKNLCDSGIVQPYPPLCDVKGSYVSQFEHTILLRP 427
>GUNB_NEOPA (Q12647) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 473 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 8/49 (16%) Frame = -2 Query: 340 GSNCCSGCDVILSDPFGINNTVNLMWA--------TRSPCFSWRTGYGC 218 G +CC+GC+V +D G N W T C+S + GY C Sbjct: 398 GYSCCNGCEVEYTDSDGEWGVENGNWCGIKSSCSNTSRICWSEKLGYPC 446
>ARX1_YARLI (Q6CCY2) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 484 Score = 29.3 bits (64), Expect = 9.4 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +3 Query: 138 IMPFTARALEEK--RARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFT 278 + PF +E +ARLGL E + H++L P PV K L A +F+ Sbjct: 346 VYPFKLSHVESNVAKARLGLGEILAHQILVPIPVKVAKFVPLAALYEFS 394 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,306,036 Number of Sequences: 219361 Number of extensions: 1210592 Number of successful extensions: 2660 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2615 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2660 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
