| Clone Name | bags7c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009416.1| Triticum aestivum clone wlmk1.pk0006.c8:fis, full insert mRNA sequence Length = 1869 Score = 872 bits (440), Expect = 0.0 Identities = 514/536 (95%), Gaps = 2/536 (0%) Strand = Plus / Plus Query: 15 atcgcatttatggtgtctttgaccaccagttacctgcagcattgaaaaagcttcccttcg 74 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 887 atcgcatttatggtgtctttgaccaccagttacctgcagcactgaaaaagcttcctttcg 946 Query: 75 ataaacatctttcattgcaaaatgttcggaaagtcatttctgaggctgatggttaccagc 134 ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 947 ataaacatctttcgctgcaaaatgttcggaaagtcatttctgaggctgacggttaccagc 1006 Query: 135 cccatttgattgcccctgagcaaggttacagaagacttatagatagttcactcagctact 194 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1007 cccatttgattgcccctgagcaaggttatagaaggcttatagatagttcactcagctact 1066 Query: 195 ttaggggtccggctgaagcttcagttgatgcggtccatttggtattgaaggagctagtcc 254 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 ttaggggcccagctgaagcttcagttgatgcggtccatttggtattgaaggagctagtcc 1126 Query: 255 gaaggtcgattgcagcaacagaggaattgaagcgtttcccaacgcttcaatcagatatag 314 | || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1127 ggagatcgattgcagcaacagaggaattaaagcgtttcccaacgcttcaatcagatatag 1186 Query: 315 ctgcagcagcaaatgaaagcctagaaagattccgtgaggatggccgcaagacggttattc 374 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1187 ctgcagcagcaaatgaaagcctagaaagattccgtgaggatggccgaaagacagttattc 1246 Query: 375 gtctagttgacatggaggccagttacctaacagtagagttcttcaggaaacttcctactg 434 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1247 gtctagttgacatggaggccagttacctaaccgtagagttcttcaggaaactt-ctactt 1305 Query: 435 aa-ccagacaaaggagctaacaataacactccggccaacgacagatatcaggataaccat 493 || || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1306 aacccggacaaaggagctaacaacaacactccggccaacgacagatatcaggacaaccat 1365 Query: 494 cttcgaagaatcggatcgaatgtatcatcttacatcaacatggtttgcgatacatt 549 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1366 cttagaagaatcggatcgaatgtatcatcttacatcaacatggtttgcgatacatt 1421
>ref|XM_469531.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2114 Score = 585 bits (295), Expect = e-164 Identities = 475/535 (88%) Strand = Plus / Plus Query: 15 atcgcatttatggtgtctttgaccaccagttacctgcagcattgaaaaagcttcccttcg 74 |||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||| || | Sbjct: 1079 atcgtatttatggtgtctttgaccaccaattaccagcagcactgaaaaagcttccatttg 1138 Query: 75 ataaacatctttcattgcaaaatgttcggaaagtcatttctgaggctgatggttaccagc 134 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 1139 ataagcatctttcattgcaaaatgttcggaaagtcatttcagaggctgatggttatcaac 1198 Query: 135 cccatttgattgcccctgagcaaggttacagaagacttatagatagttcactcagctact 194 |||| |||||||||||||||||||| |||||||| |||||||||||||| ||| ||||| Sbjct: 1199 cccacttgattgcccctgagcaagggtacagaaggcttatagatagttcgctccactact 1258 Query: 195 ttaggggtccggctgaagcttcagttgatgcggtccatttggtattgaaggagctagtcc 254 | |||||||| || |||||||||||||||||||| |||||||| |||||||| || || | Sbjct: 1259 tcaggggtccagcggaagcttcagttgatgcggttcatttggtcttgaaggaacttgttc 1318 Query: 255 gaaggtcgattgcagcaacagaggaattgaagcgtttcccaacgcttcaatcagatatag 314 | || |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1319 gtagatcgattgcagcaacagaggagttgaagcgtttcccaacacttcagacagatatag 1378 Query: 315 ctgcagcagcaaatgaaagcctagaaagattccgtgaggatggccgcaagacggttattc 374 |||| ||||||||||||||||| |||||||| ||||||||||| || ||||| ||||||| Sbjct: 1379 ctgctgcagcaaatgaaagcctggaaagatttcgtgaggatggtcgaaagacagttattc 1438 Query: 375 gtctagttgacatggaggccagttacctaacagtagagttcttcaggaaacttcctactg 434 |||| ||||| ||||||||||| |||||||| ||||| || ||||| ||||| ||||| | Sbjct: 1439 gtcttgttgagatggaggccagctacctaactgtagaatttttcagaaaactccctacag 1498 Query: 435 aaccagacaaaggagctaacaataacactccggccaacgacagatatcaggataaccatc 494 ||||||| || || ||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 1499 aaccagataagggggctaataataacactccagccaatgacagatatcaggacaaccatt 1558 Query: 495 ttcgaagaatcggatcgaatgtatcatcttacatcaacatggtttgcgatacatt 549 | |||||||||| || ||||||||||||||||| ||||||||||| || ||||| Sbjct: 1559 taagaagaatcgggtcaaatgtatcatcttacattaacatggtttgtgagacatt 1613
>gb|AY109633.1| Zea mays CL692_1 mRNA sequence Length = 2155 Score = 478 bits (241), Expect = e-131 Identities = 450/523 (86%) Strand = Plus / Plus Query: 15 atcgcatttatggtgtctttgaccaccagttacctgcagcattgaaaaagcttcccttcg 74 |||| |||||||||||||||||| ||||||||||||||||| || |||||| || | Sbjct: 1161 atcggatttatggtgtctttgacaaccagttacctgcagcactgnnnnngcttccatttg 1220 Query: 75 ataaacatctttcattgcaaaatgttcggaaagtcatttctgaggctgatggttaccagc 134 | ||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 1221 accggcatctttcaatgcaaaatgttcgcaaagttatttcagaggctgatggttaccagc 1280 Query: 135 cccatttgattgcccctgagcaaggttacagaagacttatagatagttcactcagctact 194 |||| |||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 1281 cccacttgattgcccctgagcaaggatacagaaggcttatagatagttctctaagctact 1340 Query: 195 ttaggggtccggctgaagcttcagttgatgcggtccatttggtattgaaggagctagtcc 254 ||| |||||| |||||||| || |||||||||||||||||||| ||||||||||| || | Sbjct: 1341 ttaagggtccagctgaagcatctgttgatgcggtccatttggtcttgaaggagcttgttc 1400 Query: 255 gaaggtcgattgcagcaacagaggaattgaagcgtttcccaacgcttcaatcagatatag 314 | || || |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1401 ggagatctattgcagcaacagaggaattgaagcgattcccaacacttcaatcagatatag 1460 Query: 315 ctgcagcagcaaatgaaagcctagaaagattccgtgaggatggccgcaagacggttattc 374 |||| || |||||||| ||| | |||||||||||||||||||| || ||||| ||| ||| Sbjct: 1461 ctgctgctgcaaatgatagcttggaaagattccgtgaggatggacgaaagactgttcttc 1520 Query: 375 gtctagttgacatggaggccagttacctaacagtagagttcttcaggaaacttcctactg 434 |||||||||| ||||| ||||| ||||||||||||||| | | ||||||||||||| Sbjct: 1521 gtctagttgagatggaagccagctacctaacagtagagnnnnnccgtaaacttcctactg 1580 Query: 435 aaccagacaaaggagctaacaataacactccggccaacgacagatatcaggataaccatc 494 ||||||| |||| |||| | || |||||||| | | || || |||||||| || |||| Sbjct: 1581 aaccagagaaagcagctgataagaacactccagtgagtgataggtatcaggacaatcatc 1640 Query: 495 ttcgaagaatcggatcgaatgtatcatcttacatcaacatggt 537 | ||||||||||||||||||| |||||||| || |||||||| Sbjct: 1641 tcagaagaatcggatcgaatgtgtcatcttatattaacatggt 1683
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 15 atcgcatttatggtgtctttgaccaccagttacctgcagcattgaaaaagcttcccttcg 74 |||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||| || | Sbjct: 28555529 atcgtatttatggtgtctttgaccaccaattaccagcagcactgaaaaagcttccatttg 28555588 Query: 75 ataaacatctttcattgcaaaatgttcggaaagtcatttctgaggctgatggttaccagc 134 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 28555589 ataagcatctttcattgcaaaatgttcggaaagtcatttcagaggctgatggttatcaac 28555648 Query: 135 cccatttgattgcccctgagcaaggttacagaagacttatagatagttcactcagctact 194 |||| |||||||||||||||||||| |||||||| |||||||||||||| ||| ||||| Sbjct: 28555649 cccacttgattgcccctgagcaagggtacagaaggcttatagatagttcgctccactact 28555708 Query: 195 ttaggggtccggctgaagcttcagttgatgcggt 228 | |||||||| || |||||||||||||||||||| Sbjct: 28555709 tcaggggtccagcggaagcttcagttgatgcggt 28555742 Score = 230 bits (116), Expect = 4e-57 Identities = 203/232 (87%) Strand = Plus / Plus Query: 276 aggaattgaagcgtttcccaacgcttcaatcagatatagctgcagcagcaaatgaaagcc 335 |||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 28556303 aggagttgaagcgtttcccaacacttcagacagatatagctgctgcagcaaatgaaagcc 28556362 Query: 336 tagaaagattccgtgaggatggccgcaagacggttattcgtctagttgacatggaggcca 395 | |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||||| Sbjct: 28556363 tggaaagatttcgtgaggatggtcgaaagacagttattcgtcttgttgagatggaggcca 28556422 Query: 396 gttacctaacagtagagttcttcaggaaacttcctactgaaccagacaaaggagctaaca 455 | |||||||| ||||| || ||||| ||||| ||||| |||||||| || || ||||| | Sbjct: 28556423 gctacctaactgtagaatttttcagaaaactccctacagaaccagataagggggctaata 28556482 Query: 456 ataacactccggccaacgacagatatcaggataaccatcttcgaagaatcgg 507 |||||||||| ||||| |||||||||||||| |||||| | |||||||||| Sbjct: 28556483 ataacactccagccaatgacagatatcaggacaaccatttaagaagaatcgg 28556534 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 512 aatgtatcatcttacatcaacatggtttgcgatacatt 549 ||||||||||||||||| ||||||||||| || ||||| Sbjct: 28556821 aatgtatcatcttacattaacatggtttgtgagacatt 28556858 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 230 catttggtattgaaggagctagtccgaaggtcgattgcagcaacagagg 278 |||||||| |||||||| || || || || ||||||||||||||||||| Sbjct: 28556153 catttggtcttgaaggaacttgttcgtagatcgattgcagcaacagagg 28556201 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 caaaggagctaacaataaca 461 |||||||||||||||||||| Sbjct: 31550726 caaaggagctaacaataaca 31550707
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 15 atcgcatttatggtgtctttgaccaccagttacctgcagcattgaaaaagcttcccttcg 74 |||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||| || | Sbjct: 28646853 atcgtatttatggtgtctttgaccaccaattaccagcagcactgaaaaagcttccatttg 28646912 Query: 75 ataaacatctttcattgcaaaatgttcggaaagtcatttctgaggctgatggttaccagc 134 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 28646913 ataagcatctttcattgcaaaatgttcggaaagtcatttcagaggctgatggttatcaac 28646972 Query: 135 cccatttgattgcccctgagcaaggttacagaagacttatagatagttcactcagctact 194 |||| |||||||||||||||||||| |||||||| |||||||||||||| ||| ||||| Sbjct: 28646973 cccacttgattgcccctgagcaagggtacagaaggcttatagatagttcgctccactact 28647032 Query: 195 ttaggggtccggctgaagcttcagttgatgcggt 228 | |||||||| || |||||||||||||||||||| Sbjct: 28647033 tcaggggtccagcggaagcttcagttgatgcggt 28647066 Score = 230 bits (116), Expect = 4e-57 Identities = 203/232 (87%) Strand = Plus / Plus Query: 276 aggaattgaagcgtttcccaacgcttcaatcagatatagctgcagcagcaaatgaaagcc 335 |||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 28647627 aggagttgaagcgtttcccaacacttcagacagatatagctgctgcagcaaatgaaagcc 28647686 Query: 336 tagaaagattccgtgaggatggccgcaagacggttattcgtctagttgacatggaggcca 395 | |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||||| Sbjct: 28647687 tggaaagatttcgtgaggatggtcgaaagacagttattcgtcttgttgagatggaggcca 28647746 Query: 396 gttacctaacagtagagttcttcaggaaacttcctactgaaccagacaaaggagctaaca 455 | |||||||| ||||| || ||||| ||||| ||||| |||||||| || || ||||| | Sbjct: 28647747 gctacctaactgtagaatttttcagaaaactccctacagaaccagataagggggctaata 28647806 Query: 456 ataacactccggccaacgacagatatcaggataaccatcttcgaagaatcgg 507 |||||||||| ||||| |||||||||||||| |||||| | |||||||||| Sbjct: 28647807 ataacactccagccaatgacagatatcaggacaaccatttaagaagaatcgg 28647858 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 512 aatgtatcatcttacatcaacatggtttgcgatacatt 549 ||||||||||||||||| ||||||||||| || ||||| Sbjct: 28648145 aatgtatcatcttacattaacatggtttgtgagacatt 28648182 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 230 catttggtattgaaggagctagtccgaaggtcgattgcagcaacagagg 278 |||||||| |||||||| || || || || ||||||||||||||||||| Sbjct: 28647477 catttggtcttgaaggaacttgttcgtagatcgattgcagcaacagagg 28647525 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 caaaggagctaacaataaca 461 |||||||||||||||||||| Sbjct: 31641232 caaaggagctaacaataaca 31641213
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 15 atcgcatttatggtgtctttgaccaccagttacctgcagcattgaaaaagcttcccttcg 74 |||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||| || | Sbjct: 143367 atcgtatttatggtgtctttgaccaccaattaccagcagcactgaaaaagcttccatttg 143308 Query: 75 ataaacatctttcattgcaaaatgttcggaaagtcatttctgaggctgatggttaccagc 134 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 143307 ataagcatctttcattgcaaaatgttcggaaagtcatttcagaggctgatggttatcaac 143248 Query: 135 cccatttgattgcccctgagcaaggttacagaagacttatagatagttcactcagctact 194 |||| |||||||||||||||||||| |||||||| |||||||||||||| ||| ||||| Sbjct: 143247 cccacttgattgcccctgagcaagggtacagaaggcttatagatagttcgctccactact 143188 Query: 195 ttaggggtccggctgaagcttcagttgatgcggt 228 | |||||||| || |||||||||||||||||||| Sbjct: 143187 tcaggggtccagcggaagcttcagttgatgcggt 143154 Score = 230 bits (116), Expect = 4e-57 Identities = 203/232 (87%) Strand = Plus / Minus Query: 276 aggaattgaagcgtttcccaacgcttcaatcagatatagctgcagcagcaaatgaaagcc 335 |||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 142593 aggagttgaagcgtttcccaacacttcagacagatatagctgctgcagcaaatgaaagcc 142534 Query: 336 tagaaagattccgtgaggatggccgcaagacggttattcgtctagttgacatggaggcca 395 | |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||||| Sbjct: 142533 tggaaagatttcgtgaggatggtcgaaagacagttattcgtcttgttgagatggaggcca 142474 Query: 396 gttacctaacagtagagttcttcaggaaacttcctactgaaccagacaaaggagctaaca 455 | |||||||| ||||| || ||||| ||||| ||||| |||||||| || || ||||| | Sbjct: 142473 gctacctaactgtagaatttttcagaaaactccctacagaaccagataagggggctaata 142414 Query: 456 ataacactccggccaacgacagatatcaggataaccatcttcgaagaatcgg 507 |||||||||| ||||| |||||||||||||| |||||| | |||||||||| Sbjct: 142413 ataacactccagccaatgacagatatcaggacaaccatttaagaagaatcgg 142362 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 512 aatgtatcatcttacatcaacatggtttgcgatacatt 549 ||||||||||||||||| ||||||||||| || ||||| Sbjct: 142075 aatgtatcatcttacattaacatggtttgtgagacatt 142038 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 230 catttggtattgaaggagctagtccgaaggtcgattgcagcaacagagg 278 |||||||| |||||||| || || || || ||||||||||||||||||| Sbjct: 142743 catttggtcttgaaggaacttgttcgtagatcgattgcagcaacagagg 142695
>ref|NM_123573.3| Arabidopsis thaliana ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding AT5G42080 (ADL1) transcript variant AT5G42080.2 mRNA, complete cds Length = 1669 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 1389 ctgaggctgatggttaccagcctcacttgattgctcctgagcaaggttac 1438
>ref|NM_180789.1| Arabidopsis thaliana ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding AT5G42080 (ADL1) transcript variant AT5G42080.1 mRNA, complete cds Length = 2427 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 1389 ctgaggctgatggttaccagcctcacttgattgctcctgagcaaggttac 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 380 gttgacatggaggccagttacctaacagtagagttcttcaggaaacttcc 429 |||||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 1655 gttgacatggagtgcagttacctcactgttgatttcttcaggaaacttcc 1704
>gb|BT001063.1| Arabidopsis thaliana At5g42080/MJC20_19 mRNA, complete cds Length = 1833 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 1172 ctgaggctgatggttaccagcctcacttgattgctcctgagcaaggttac 1221 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 380 gttgacatggaggccagttacctaacagtagagttcttcaggaaacttcc 429 |||||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 1438 gttgacatggagtgcagttacctcactgttgatttcttcaggaaacttcc 1487
>gb|AY094408.1| Arabidopsis thaliana AT5g42080/MJC20_19 mRNA, complete cds Length = 2269 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 1389 ctgaggctgatggttaccagcctcacttgattgctcctgagcaaggttac 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 380 gttgacatggaggccagttacctaacagtagagttcttcaggaaacttcc 429 |||||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 1655 gttgacatggagtgcagttacctcactgttgatttcttcaggaaacttcc 1704
>gb|AY088201.1| Arabidopsis thaliana clone 42932 mRNA, complete sequence Length = 1617 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 1392 ctgaggctgatggttaccagcctcacttgattgctcctgagcaaggttac 1441
>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20 Length = 83689 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 43915 ctgaggctgatggttaccagcctcacttgattgctcctgagcaaggttac 43866 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 380 gttgacatggaggccagttacctaacagtagagttcttcaggaaacttcc 429 |||||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 43447 gttgacatggagtgcagttacctcactgttgatttcttcaggaaacttcc 43398
>gb|L36939.1|ATHDYNAGTP Arabidopsis thaliana dynamin-like GTP binding protein mRNA, complete cds Length = 2160 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 1269 ctgaggctgatggttaccagcctcacttgattgctcctgagcaaggttac 1318 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 380 gttgacatggaggccagttacctaacagtagagttcttcaggaaacttcc 429 |||||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 1535 gttgacatggagtgcagttacctcactgttgatttcttcaggaaacttcc 1584
>gb|L38614.1|ATHGTPBPA Arabidopsis thaliana GTP-binding protein mRNA, complete cds Length = 2234 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 1378 ctgaggctgatggttaccagcctcacttgattgctcctgagcaaggttac 1427 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 380 gttgacatggaggccagttacctaacagtagagttcttcaggaaacttcc 429 |||||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 1644 gttgacatggagtgcagttacctcactgttgatttcttcaggaaacttcc 1693
>ref|NM_101352.2| Arabidopsis thaliana ADL1C (DYNAMIN-LIKE PROTEIN 5); GTP binding / GTPase AT1G14830 (ADL1C) mRNA, complete cds Length = 2323 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 221 gatgcggtccatttggtattgaaggagctagtccgaaggtcgattgcagcaacagaggaa 280 ||||| || ||||| |||||||||||||| ||| ||| ||| ||| ||| |||||||||| Sbjct: 1482 gatgcagtgcatttcgtattgaaggagctggtcagaaagtcaatttcagaaacagaggaa 1541 Query: 281 ttgaagcgtttccc 294 ||||||||||||| Sbjct: 1542 ctgaagcgtttccc 1555
>gb|AY150494.1| Arabidopsis thaliana putative dynamin protein (At1g14830) mRNA, complete cds Length = 1876 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 221 gatgcggtccatttggtattgaaggagctagtccgaaggtcgattgcagcaacagaggaa 280 ||||| || ||||| |||||||||||||| ||| ||| ||| ||| ||| |||||||||| Sbjct: 1282 gatgcagtgcatttcgtattgaaggagctggtcagaaagtcaatttcagaaacagaggaa 1341 Query: 281 ttgaagcgtttccc 294 ||||||||||||| Sbjct: 1342 ctgaagcgtttccc 1355
>gb|AY039955.1| Arabidopsis thaliana putative dynamin protein (At1g14830) mRNA, complete cds Length = 2250 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 221 gatgcggtccatttggtattgaaggagctagtccgaaggtcgattgcagcaacagaggaa 280 ||||| || ||||| |||||||||||||| ||| ||| ||| ||| ||| |||||||||| Sbjct: 1443 gatgcagtgcatttcgtattgaaggagctggtcagaaagtcaatttcagaaacagaggaa 1502 Query: 281 ttgaagcgtttccc 294 ||||||||||||| Sbjct: 1503 ctgaagcgtttccc 1516
>gb|AF488808.1| Arabidopsis thaliana dynamin-like protein C mRNA, complete cds Length = 2054 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 221 gatgcggtccatttggtattgaaggagctagtccgaaggtcgattgcagcaacagaggaa 280 ||||| || ||||| |||||||||||||| ||| ||| ||| ||| ||| |||||||||| Sbjct: 1377 gatgcagtgcatttcgtattgaaggagctggtcagaaagtcaatttcagaaacagaggaa 1436 Query: 281 ttgaagcgtttccc 294 ||||||||||||| Sbjct: 1437 ctgaagcgtttccc 1450
>gb|AY085091.1| Arabidopsis thaliana clone 12880 mRNA, complete sequence Length = 2253 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 221 gatgcggtccatttggtattgaaggagctagtccgaaggtcgattgcagcaacagaggaa 280 ||||| || ||||| |||||||||||||| ||| ||| ||| ||| ||| |||||||||| Sbjct: 1455 gatgcagtgcatttcgtattgaaggagctggtcagaaagtcaatttcagaaacagaggaa 1514 Query: 281 ttgaagcgtttccc 294 ||||||||||||| Sbjct: 1515 ctgaagcgtttccc 1528
>emb|AJ304841.1|ATH304841 Arabidopsis thaliana mRNA for dynamin-like protein ADLP1 (dlp1 gene) Length = 2352 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 221 gatgcggtccatttggtattgaaggagctagtccgaaggtcgattgcagcaacagaggaa 280 ||||| || ||||| |||||||||||||| ||| ||| ||| ||| ||| |||||||||| Sbjct: 1482 gatgcagtgcatttcgtattgaaggagctggtcagaaagtcaatttcagaaacagaggaa 1541 Query: 281 ttgaagcgtttccc 294 ||||||||||||| Sbjct: 1542 ctgaagcgtttccc 1555
>gb|AF180734.1|AF180734 Arabidopsis thaliana dynamin-like protein 5 (ADL5) mRNA, complete cds Length = 2244 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 221 gatgcggtccatttggtattgaaggagctagtccgaaggtcgattgcagcaacagaggaa 280 ||||| || ||||| |||||||||||||| ||| ||| ||| ||| ||| |||||||||| Sbjct: 1442 gatgcagtgcatttcgtattgaaggagctggtcagaaagtcaatttcagaaacagaggaa 1501 Query: 281 ttgaagcgtttccc 294 ||||||||||||| Sbjct: 1502 ctgaagcgtttccc 1515
>dbj|AP006426.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02I08, TM0316, complete sequence Length = 91886 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 116 gaggctgatggttaccagccccatttgattgcccctgagcaaggttac 163 |||||||||||||| ||||| || ||||||||||| |||||||||||| Sbjct: 42369 gaggctgatggttatcagcctcacttgattgccccagagcaaggttac 42322 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 185 ctcagctactttaggggtccggctgaagcttcagttgatgc 225 ||||| |||||||| || || |||||||||||||| ||||| Sbjct: 42300 ctcagttactttagaggcccagctgaagcttcagtagatgc 42260
>emb|BX815678.1|CNS0ADV5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS82ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1615 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 221 gatgcggtccatttggtattgaaggagctagtccgaaggtcgattgcagcaacagaggaa 280 ||||| || ||||| |||||||||||||| ||| ||| ||| || ||| |||||||||| Sbjct: 856 gatgcagtgcatttcgtattgaaggagctggtcagaaagtcaatctcagaaacagaggaa 915 Query: 281 ttgaagcgtttccc 294 ||||||||||||| Sbjct: 916 ctgaagcgtttccc 929
>ref|NM_116041.2| Arabidopsis thaliana GTP binding / GTPase AT3G61760 mRNA, complete cds Length = 1926 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 377 ctagttgacatggaggccagttacctaacagtagagttcttcaggaaact 426 ||||| ||||||||| | ||||| |||| || ||||||||||||||||| Sbjct: 1496 ctagtggacatggagtctggttacttaacggtcgagttcttcaggaaact 1545
>gb|BT017132.1| Zea mays clone EL01N0365G02.c mRNA sequence Length = 1266 Score = 44.1 bits (22), Expect = 0.48 Identities = 46/54 (85%) Strand = Plus / Plus Query: 377 ctagttgacatggaggccagttacctaacagtagagttcttcaggaaacttcct 430 |||||||||||||| ||| ||| | |||||||| ||||||||||| |||||| Sbjct: 632 ctagttgacatggaatgcagctacttgacagtagatttcttcaggaagcttcct 685
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 377 ctagttgacatggaggccagttacctaacagtagagttcttcaggaaact 426 ||||| ||||||||| | ||||| |||| || ||||||||||||||||| Sbjct: 23715 ctagtggacatggagtctggttacttaacggtcgagttcttcaggaaact 23666
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16 Length = 104868 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 377 ctagttgacatggaggccagttacctaacagtagagttcttcaggaaact 426 ||||| ||||||||| | ||||| |||| || ||||||||||||||||| Sbjct: 72403 ctagtggacatggagtctggttacttaacggtcgagttcttcaggaaact 72354
>gb|AY189279.1| Arabidopsis thaliana dynamin-like protein B mRNA, complete cds Length = 1926 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 377 ctagttgacatggaggccagttacctaacagtagagttcttcaggaaact 426 ||||| ||||||||| | ||||| |||| || ||||||||||||||||| Sbjct: 1496 ctagtggacatggagtctggttacttaacggtcgagttcttcaggaaact 1545
>emb|AJ244024.1|NTA244024 Nicotiana tabacum mRNA for phragmoplastin, dynamin-like protein Length = 2193 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 114 ctgaggctgatggttaccagccccatttgattgcccctgagcaagg 159 |||| |||||||| ||||| || ||| ||||||| ||||||||||| Sbjct: 1282 ctgaagctgatggataccaaccacatctgattgctcctgagcaagg 1327 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 395 agttacctaacagtagagttcttcaggaaacttcct 430 |||||||| || ||||| |||||| ||||||||||| Sbjct: 1563 agttacctgactgtagatttcttccggaaacttcct 1598
>gb|AY104344.1| Zea mays PCO082748 mRNA sequence Length = 1812 Score = 44.1 bits (22), Expect = 0.48 Identities = 46/54 (85%) Strand = Plus / Plus Query: 377 ctagttgacatggaggccagttacctaacagtagagttcttcaggaaacttcct 430 |||||||||||||| ||| ||| | |||||||| ||||||||||| |||||| Sbjct: 1160 ctagttgacatggaatgcagctacttgacagtagatttcttcaggaagcttcct 1213
>ref|NM_197808.1| Oryza sativa (japonica cultivar-group) putative phragmoplastin (OSJNBa0057L21.1), mRNA Length = 2121 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 119 gctgatggttaccagccccatttgattgcccctgagcaagg 159 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 1265 gctgatggttatcaacctcatttaattgctcctgagcaagg 1305
>gb|BT013479.1| Lycopersicon esculentum clone 132157F, mRNA sequence Length = 2201 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 197 aggggtccggctgaagcttcagttgatgcggtccatttggtattgaaggagct 249 |||||||| |||||||| ||||| ||||| ||||| || | ||||||||||| Sbjct: 1456 aggggtcctgctgaagcctcagtggatgcagtccacttcatcttgaaggagct 1508 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 15 atcgcatttatggtgtctttgaccaccag 43 ||||||||||||| || |||||||||||| Sbjct: 1274 atcgcatttatggggtttttgaccaccag 1302
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 119 gctgatggttaccagccccatttgattgcccctgagcaagg 159 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 22250 gctgatggttatcaacctcatttaattgctcctgagcaagg 22290
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 119 gctgatggttaccagccccatttgattgcccctgagcaagg 159 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 21986071 gctgatggttatcaacctcatttaattgctcctgagcaagg 21986031
>gb|AC006917.6|AC006917 Genomic sequence for Arabidopsis thaliana BAC F10B6 from chromosome I, complete sequence Length = 132699 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 230 catttggtattgaaggagctagtccgaaggtcgattgcagcaacagagg 278 ||||| |||||||||||||| ||| ||| ||| ||| ||| |||||||| Sbjct: 76499 catttcgtattgaaggagctggtcagaaagtcaatttcagaaacagagg 76451
>dbj|AK073186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007I10, full insert sequence Length = 2141 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 119 gctgatggttaccagccccatttgattgcccctgagcaagg 159 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 1356 gctgatggttatcaacctcatttaattgctcctgagcaagg 1396
>dbj|AK061703.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-E04, full insert sequence Length = 1263 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 119 gctgatggttaccagccccatttgattgcccctgagcaagg 159 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 407 gctgatggttatcaacctcatttaattgctcctgagcaagg 447
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 119 gctgatggttaccagccccatttgattgcccctgagcaagg 159 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 21997734 gctgatggttatcaacctcatttaattgctcctgagcaagg 21997694
>ref|XM_475890.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1623 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 taacagtagagttcttcaggaaacttcc 429 |||| ||||| ||||||||||||||||| Sbjct: 1457 taaccgtagatttcttcaggaaacttcc 1484
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 caaaggagctaacaataaca 461 |||||||||||||||||||| Sbjct: 129941 caaaggagctaacaataaca 129960
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 taacagtagagttcttcaggaaacttcc 429 |||| ||||| ||||||||||||||||| Sbjct: 24932 taaccgtagatttcttcaggaaacttcc 24905
>gb|AC140109.4| Mus musculus BAC clone RP24-156A17 from chromosome 3, complete sequence Length = 130716 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 tgcagcagcaaatgaaagcc 335 |||||||||||||||||||| Sbjct: 304 tgcagcagcaaatgaaagcc 285
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 caaaggagctaacaataaca 461 |||||||||||||||||||| Sbjct: 41880 caaaggagctaacaataaca 41899
>gb|AC113097.11| Mus musculus chromosome 18, clone RP23-314E8, complete sequence Length = 172295 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tttatggtgtctttgaccac 40 |||||||||||||||||||| Sbjct: 74090 tttatggtgtctttgaccac 74109
>gb|AC100382.22| Mus musculus chromosome 5, clone RP23-132D5, complete sequence Length = 190712 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 atggtgtctttgaccaccag 43 |||||||||||||||||||| Sbjct: 49461 atggtgtctttgaccaccag 49442
>ref|XM_780357.1| PREDICTED: Strongylocentrotus purpuratus similar to Solute carrier family 23, member 2 (Sodium-dependent vitamin C transporter 2) (mSVCT2) (Na(+)/L-ascorbic acid transporter 2) (Yolk sac permease-like molecule 2) (LOC580287), mRNA Length = 2328 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ccgaaggtcgattgcagcaa 272 |||||||||||||||||||| Sbjct: 410 ccgaaggtcgattgcagcaa 391
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 taacagtagagttcttcaggaaacttcc 429 |||| ||||| ||||||||||||||||| Sbjct: 27428802 taaccgtagatttcttcaggaaacttcc 27428775
>dbj|AK065908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L08, full insert sequence Length = 2303 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 taacagtagagttcttcaggaaacttcc 429 |||| ||||| ||||||||||||||||| Sbjct: 1644 taaccgtagatttcttcaggaaacttcc 1671
>gb|AC152721.3| Mus musculus BAC clone RP23-425F13 from chromosome 5, complete sequence Length = 221637 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 atggtgtctttgaccaccag 43 |||||||||||||||||||| Sbjct: 94642 atggtgtctttgaccaccag 94661
>gb|AC139942.4| Mus musculus BAC clone RP23-447N11 from 3, complete sequence Length = 186057 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 tgcagcagcaaatgaaagcc 335 |||||||||||||||||||| Sbjct: 86616 tgcagcagcaaatgaaagcc 86597
>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069, complete sequence Length = 103659 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 119 gctgatggttaccagccccatttgattgcccctgagcaaggttacagaagacttat 174 |||||||| || ||||||||| | ||||| || || || ||||| ||||||||||| Sbjct: 59467 gctgatgggtatcagccccatctcattgctccagaacagggttatagaagacttat 59412 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,208,386 Number of Sequences: 3902068 Number of extensions: 4208386 Number of successful extensions: 76778 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76535 Number of HSP's gapped (non-prelim): 240 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)