ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7b21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466154.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2322 Score = 339 bits (171), Expect = 5e-90 Identities = 370/435 (85%), Gaps = 1/435 (0%) Strand = Plus / Plus Query: 11 accatcgccgctttcgacct-gcatccgaggaagtcctaaactatgaccaggtgtttgtg 69 ||||||||||| ||||||| || |||||||| ||||| ||||| ||||||||||| ||| Sbjct: 520 accatcgccgccttcgaccacgcctccgaggaggtcctcaactacgaccaggtgttcgtg 579 Query: 70 agagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattgtcaag 129 || ||||||||||| ||||| ||||||| |||||||| |||||||||||||| || | | Sbjct: 580 agggatttcgtgccgagcgcgctggcgttcctgatgaacggcgagccggagatcgtgagg 639 Query: 130 aacttcctgctcaagaccgttttgttgcagggttgggagaagaaggttgatcggtttaag 189 |||||||||||||||| | || ||||||| |||||||||||||| |||||||| ||| Sbjct: 640 cacttcctgctcaagacgctcctgctgcagggctgggagaagaaggtcgatcggttcaag 699 Query: 190 cttggtgagggggccatgcctgcaagctttaaagtgcttcatgacgataagaagggtgtt 249 || || ||||| |||||||| || ||||| |||||||| |||||| |||||||| || Sbjct: 700 ctcggggagggcgccatgccggccagcttcaaagtgctccatgactccaagaagggcgtc 759 Query: 250 gatacccttcacgccgattttggtgagagcgcaattgggcgggttgcaccagtggattcg 309 || ||||| || || ||||| || |||||||| ||||| |||| || || ||||||||| Sbjct: 760 gacaccctgcatgcggatttcggggagagcgccattggcagggtggctcccgtggattcg 819 Query: 310 gggttctggtggatcatactattgcgggcctacacaaagtccaccggggatttgactctg 369 |||||||||||||||||||| | ||||| ||||| ||||||||||||||| | || || Sbjct: 820 gggttctggtggatcatacttctacgggcatacaccaagtccaccggggatctcacgctc 879 Query: 370 gcagagaggccggaatgccagaaggcaatgaggctcattctgagcctgtgcttgtctgag 429 || |||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||| Sbjct: 880 gcggagacgccggaatgccagaagggaatgaggctgatactgagcctgtgcttgtctgag 939 Query: 430 ggatttgataccttc 444 || |||||||||||| Sbjct: 940 gggtttgataccttc 954
>dbj|AK102741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106F23, full insert sequence Length = 2449 Score = 339 bits (171), Expect = 5e-90 Identities = 370/435 (85%), Gaps = 1/435 (0%) Strand = Plus / Plus Query: 11 accatcgccgctttcgacct-gcatccgaggaagtcctaaactatgaccaggtgtttgtg 69 ||||||||||| ||||||| || |||||||| ||||| ||||| ||||||||||| ||| Sbjct: 520 accatcgccgccttcgaccacgcctccgaggaggtcctcaactacgaccaggtgttcgtg 579 Query: 70 agagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattgtcaag 129 || ||||||||||| ||||| ||||||| |||||||| |||||||||||||| || | | Sbjct: 580 agggatttcgtgccgagcgcgctggcgttcctgatgaacggcgagccggagatcgtgagg 639 Query: 130 aacttcctgctcaagaccgttttgttgcagggttgggagaagaaggttgatcggtttaag 189 |||||||||||||||| | || ||||||| |||||||||||||| |||||||| ||| Sbjct: 640 cacttcctgctcaagacgctcctgctgcagggctgggagaagaaggtcgatcggttcaag 699 Query: 190 cttggtgagggggccatgcctgcaagctttaaagtgcttcatgacgataagaagggtgtt 249 || || ||||| |||||||| || ||||| |||||||| |||||| |||||||| || Sbjct: 700 ctcggggagggcgccatgccggccagcttcaaagtgctccatgactccaagaagggcgtc 759 Query: 250 gatacccttcacgccgattttggtgagagcgcaattgggcgggttgcaccagtggattcg 309 || ||||| || || ||||| || |||||||| ||||| |||| || || ||||||||| Sbjct: 760 gacaccctgcatgcggatttcggggagagcgccattggcagggtggctcccgtggattcg 819 Query: 310 gggttctggtggatcatactattgcgggcctacacaaagtccaccggggatttgactctg 369 |||||||||||||||||||| | ||||| ||||| ||||||||||||||| | || || Sbjct: 820 gggttctggtggatcatacttctacgggcatacaccaagtccaccggggatctcacgctc 879 Query: 370 gcagagaggccggaatgccagaaggcaatgaggctcattctgagcctgtgcttgtctgag 429 || |||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||| Sbjct: 880 gcggagacgccggaatgccagaagggaatgaggctgatactgagcctgtgcttgtctgag 939 Query: 430 ggatttgataccttc 444 || |||||||||||| Sbjct: 940 gggtttgataccttc 954
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 307 bits (155), Expect = 2e-80 Identities = 329/387 (85%) Strand = Plus / Minus Query: 58 caggtgtttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccg 117 |||||||| ||||| ||||||||||| ||||| ||||||| |||||||| ||||||||| Sbjct: 20740443 caggtgttcgtgagggatttcgtgccgagcgcgctggcgttcctgatgaacggcgagccg 20740384 Query: 118 gagattgtcaagaacttcctgctcaagaccgttttgttgcagggttgggagaagaaggtt 177 ||||| || | | |||||||||||||||| | || ||||||| |||||||||||||| Sbjct: 20740383 gagatcgtgaggcacttcctgctcaagacgctcctgctgcagggctgggagaagaaggtc 20740324 Query: 178 gatcggtttaagcttggtgagggggccatgcctgcaagctttaaagtgcttcatgacgat 237 |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||||| Sbjct: 20740323 gatcggttcaagctcggggagggcgccatgccggccagcttcaaagtgctccatgactcc 20740264 Query: 238 aagaagggtgttgatacccttcacgccgattttggtgagagcgcaattgggcgggttgca 297 |||||||| || || ||||| || || ||||| || |||||||| ||||| |||| || Sbjct: 20740263 aagaagggcgtcgacaccctgcatgcggatttcggggagagcgccattggcagggtggct 20740204 Query: 298 ccagtggattcggggttctggtggatcatactattgcgggcctacacaaagtccaccggg 357 || ||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 20740203 cccgtggattcggggttctggtggatcatacttctacgggcatacaccaagtccaccggg 20740144 Query: 358 gatttgactctggcagagaggccggaatgccagaaggcaatgaggctcattctgagcctg 417 ||| | || || || |||| ||||||||||||||||| ||||||||| || ||||||||| Sbjct: 20740143 gatctcacgctcgcggagacgccggaatgccagaagggaatgaggctgatactgagcctg 20740084 Query: 418 tgcttgtctgagggatttgataccttc 444 |||||||||||||| |||||||||||| Sbjct: 20740083 tgcttgtctgaggggtttgataccttc 20740057 Score = 42.1 bits (21), Expect = 1.5 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 11 accatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggt 62 ||||||||||| ||||||| || |||||||| ||||| ||||| |||||||| Sbjct: 20740606 accatcgccgccttcgaccacgcctccgaggaggtcctcaactacgaccaggt 20740554
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 307 bits (155), Expect = 2e-80 Identities = 329/387 (85%) Strand = Plus / Minus Query: 58 caggtgtttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccg 117 |||||||| ||||| ||||||||||| ||||| ||||||| |||||||| ||||||||| Sbjct: 91549 caggtgttcgtgagggatttcgtgccgagcgcgctggcgttcctgatgaacggcgagccg 91490 Query: 118 gagattgtcaagaacttcctgctcaagaccgttttgttgcagggttgggagaagaaggtt 177 ||||| || | | |||||||||||||||| | || ||||||| |||||||||||||| Sbjct: 91489 gagatcgtgaggcacttcctgctcaagacgctcctgctgcagggctgggagaagaaggtc 91430 Query: 178 gatcggtttaagcttggtgagggggccatgcctgcaagctttaaagtgcttcatgacgat 237 |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||||| Sbjct: 91429 gatcggttcaagctcggggagggcgccatgccggccagcttcaaagtgctccatgactcc 91370 Query: 238 aagaagggtgttgatacccttcacgccgattttggtgagagcgcaattgggcgggttgca 297 |||||||| || || ||||| || || ||||| || |||||||| ||||| |||| || Sbjct: 91369 aagaagggcgtcgacaccctgcatgcggatttcggggagagcgccattggcagggtggct 91310 Query: 298 ccagtggattcggggttctggtggatcatactattgcgggcctacacaaagtccaccggg 357 || ||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 91309 cccgtggattcggggttctggtggatcatacttctacgggcatacaccaagtccaccggg 91250 Query: 358 gatttgactctggcagagaggccggaatgccagaaggcaatgaggctcattctgagcctg 417 ||| | || || || |||| ||||||||||||||||| ||||||||| || ||||||||| Sbjct: 91249 gatctcacgctcgcggagacgccggaatgccagaagggaatgaggctgatactgagcctg 91190 Query: 418 tgcttgtctgagggatttgataccttc 444 |||||||||||||| |||||||||||| Sbjct: 91189 tgcttgtctgaggggtttgataccttc 91163 Score = 42.1 bits (21), Expect = 1.5 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 11 accatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggt 62 ||||||||||| ||||||| || |||||||| ||||| ||||| |||||||| Sbjct: 91712 accatcgccgccttcgaccacgcctccgaggaggtcctcaactacgaccaggt 91660
>ref|XM_472554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1725 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 34 tccgaggaagtcctaaactatgaccaggtgtttgtgagagatttcgtgcccagcgccatg 93 ||||| || ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| || Sbjct: 403 tccgacgaggtcctcaactacgaccaggtgttcgtgagggatttcgtgccgagcgcgctg 462 Query: 94 gcgtttctgatgaatggcgagccggagattgtcaagaacttcctgctcaagaccgttttg 153 ||||| |||||||| || ||||||||||| || |||||||||||||||||||| | || Sbjct: 463 gcgttcctgatgaacggggagccggagatcgtgaagaacttcctgctcaagacgctgctg 522 Query: 154 ttgcagggttgggagaag 171 ||||||| ||||||||| Sbjct: 523 ctgcaggggtgggagaag 540 Score = 46.1 bits (23), Expect = 0.097 Identities = 68/83 (81%) Strand = Plus / Plus Query: 274 gagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatcatactattg 333 |||||||| || |||||||| || || ||||| || || |||||||||||||| || | Sbjct: 646 gagagcgccatcgggcgggtggcgccggtggactccggcttctggtggatcatcctcctc 705 Query: 334 cgggcctacacaaagtccaccgg 356 || || ||||| ||||||||||| Sbjct: 706 cgcgcgtacaccaagtccaccgg 728
>dbj|AK065562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030A21, full insert sequence Length = 2124 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 34 tccgaggaagtcctaaactatgaccaggtgtttgtgagagatttcgtgcccagcgccatg 93 ||||| || ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| || Sbjct: 604 tccgacgaggtcctcaactacgaccaggtgttcgtgagggatttcgtgccgagcgcgctg 663 Query: 94 gcgtttctgatgaatggcgagccggagattgtcaagaacttcctgctcaagaccgttttg 153 ||||| |||||||| || ||||||||||| || |||||||||||||||||||| | || Sbjct: 664 gcgttcctgatgaacggggagccggagatcgtgaagaacttcctgctcaagacgctgctg 723 Query: 154 ttgcagggttgggagaag 171 ||||||| ||||||||| Sbjct: 724 ctgcaggggtgggagaag 741 Score = 46.1 bits (23), Expect = 0.097 Identities = 68/83 (81%) Strand = Plus / Plus Query: 274 gagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatcatactattg 333 |||||||| || |||||||| || || ||||| || || |||||||||||||| || | Sbjct: 847 gagagcgccatcgggcgggtggcgccggtggactccggcttctggtggatcatcctcctc 906 Query: 334 cgggcctacacaaagtccaccgg 356 || || ||||| ||||||||||| Sbjct: 907 cgcgcgtacaccaagtccaccgg 929
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 99.6 bits (50), Expect = 7e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 58 caggtgtttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccg 117 |||||||| ||||| ||||||||||| ||||| ||||||| |||||||| || |||||| Sbjct: 112943 caggtgttcgtgagggatttcgtgccgagcgcgctggcgttcctgatgaacggggagccg 112884 Query: 118 gagattgtcaagaacttcctgctcaagaccgttttgttgcagggttgggagaag 171 ||||| || |||||||||||||||||||| | || ||||||| ||||||||| Sbjct: 112883 gagatcgtgaagaacttcctgctcaagacgctgctgctgcaggggtgggagaag 112830 Score = 46.1 bits (23), Expect = 0.097 Identities = 68/83 (81%) Strand = Plus / Minus Query: 274 gagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatcatactattg 333 |||||||| || |||||||| || || ||||| || || |||||||||||||| || | Sbjct: 112724 gagagcgccatcgggcgggtggcgccggtggactccggcttctggtggatcatcctcctc 112665 Query: 334 cgggcctacacaaagtccaccgg 356 || || ||||| ||||||||||| Sbjct: 112664 cgcgcgtacaccaagtccaccgg 112642
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 99.6 bits (50), Expect = 7e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 58 caggtgtttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccg 117 |||||||| ||||| ||||||||||| ||||| ||||||| |||||||| || |||||| Sbjct: 21463193 caggtgttcgtgagggatttcgtgccgagcgcgctggcgttcctgatgaacggggagccg 21463134 Query: 118 gagattgtcaagaacttcctgctcaagaccgttttgttgcagggttgggagaag 171 ||||| || |||||||||||||||||||| | || ||||||| ||||||||| Sbjct: 21463133 gagatcgtgaagaacttcctgctcaagacgctgctgctgcaggggtgggagaag 21463080 Score = 46.1 bits (23), Expect = 0.097 Identities = 68/83 (81%) Strand = Plus / Minus Query: 274 gagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatcatactattg 333 |||||||| || |||||||| || || ||||| || || |||||||||||||| || | Sbjct: 21462974 gagagcgccatcgggcgggtggcgccggtggactccggcttctggtggatcatcctcctc 21462915 Query: 334 cgggcctacacaaagtccaccgg 356 || || ||||| ||||||||||| Sbjct: 21462914 cgcgcgtacaccaagtccaccgg 21462892
>ref|NM_001036066.1| Arabidopsis thaliana beta-fructofuranosidase AT1G35580 transcript variant AT1G35580.3 mRNA, complete cds Length = 1854 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 35 ccgaggaagtcctaaactatgaccaggtgtttgtgagagatttcgtgcccagcgccatgg 94 |||| |||||| | |||||||| |||||||||||||| ||||| || || || || ||| Sbjct: 506 ccgatgaagtcttgaactatgatcaggtgtttgtgagggattttgtaccgagtgcgttgg 565 Query: 95 cgtttctgatgaatggcgagccgga 119 |||||||||||||||| || ||||| Sbjct: 566 cgtttctgatgaatggagaaccgga 590
>ref|NM_179419.1| Arabidopsis thaliana beta-fructofuranosidase AT1G35580 transcript variant AT1G35580.2 mRNA, complete cds Length = 2065 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 35 ccgaggaagtcctaaactatgaccaggtgtttgtgagagatttcgtgcccagcgccatgg 94 |||| |||||| | |||||||| |||||||||||||| ||||| || || || || ||| Sbjct: 494 ccgatgaagtcttgaactatgatcaggtgtttgtgagggattttgtaccgagtgcgttgg 553 Query: 95 cgtttctgatgaatggcgagccgga 119 |||||||||||||||| || ||||| Sbjct: 554 cgtttctgatgaatggagaaccgga 578
>ref|NM_103255.2| Arabidopsis thaliana beta-fructofuranosidase AT1G35580 transcript variant AT1G35580.1 mRNA, complete cds Length = 2066 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 35 ccgaggaagtcctaaactatgaccaggtgtttgtgagagatttcgtgcccagcgccatgg 94 |||| |||||| | |||||||| |||||||||||||| ||||| || || || || ||| Sbjct: 495 ccgatgaagtcttgaactatgatcaggtgtttgtgagggattttgtaccgagtgcgttgg 554 Query: 95 cgtttctgatgaatggcgagccgga 119 |||||||||||||||| || ||||| Sbjct: 555 cgtttctgatgaatggagaaccgga 579
>gb|AY142662.1| Arabidopsis thaliana putative invertase (At1g35580) mRNA, complete cds Length = 1687 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 35 ccgaggaagtcctaaactatgaccaggtgtttgtgagagatttcgtgcccagcgccatgg 94 |||| |||||| | |||||||| |||||||||||||| ||||| || || || || ||| Sbjct: 341 ccgatgaagtcttgaactatgatcaggtgtttgtgagggattttgtaccgagtgcgttgg 400 Query: 95 cgtttctgatgaatggcgagccgga 119 |||||||||||||||| || ||||| Sbjct: 401 cgtttctgatgaatggagaaccgga 425
>gb|AY065247.1| Arabidopsis thaliana putative invertase (At1g35580) mRNA, complete cds Length = 2004 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 35 ccgaggaagtcctaaactatgaccaggtgtttgtgagagatttcgtgcccagcgccatgg 94 |||| |||||| | |||||||| |||||||||||||| ||||| || || || || ||| Sbjct: 494 ccgatgaagtcttgaactatgatcaggtgtttgtgagggattttgtaccgagtgcgttgg 553 Query: 95 cgtttctgatgaatggcgagccgga 119 |||||||||||||||| || ||||| Sbjct: 554 cgtttctgatgaatggagaaccgga 578
>emb|AM230708.2| Arabidopsis thaliana mRNA for putative invertase (At1g35580 gene), from root tissue, ecotype Col-0 Length = 1822 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 35 ccgaggaagtcctaaactatgaccaggtgtttgtgagagatttcgtgcccagcgccatgg 94 |||| |||||| | |||||||| |||||||||||||| ||||| || || || || ||| Sbjct: 341 ccgatgaagtcttgaactatgatcaggtgtttgtgagggattttgtaccgagtgcgttgg 400 Query: 95 cgtttctgatgaatggcgagccgga 119 |||||||||||||||| || ||||| Sbjct: 401 cgtttctgatgaatggagaaccgga 425
>ref|NM_202796.1| Arabidopsis thaliana beta-fructofuranosidase AT4G09510 transcript variant AT4G09510.2 mRNA, complete cds Length = 1943 Score = 60.0 bits (30), Expect = 6e-06 Identities = 115/142 (80%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 6 ttggtaccatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggtgt 64 |||||||||| || |||| |||| ||| |||||||| ||| | |||||||| ||||||| Sbjct: 487 ttggtaccattgcagcttatgaccatgcctccgaggaggtcttgaactatgatcaggtgt 546 Query: 65 ttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattg 124 |||| | || || || || || || ||||||||||||||||||| ||||| || || | Sbjct: 547 ttgtacgtgactttgtaccaagtgcattggcgtttctgatgaatggagagcccgatatag 606 Query: 125 tcaagaacttcctgctcaagac 146 | || |||||| |||||||||| Sbjct: 607 tgaaaaacttcttgctcaagac 628 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 777 gcaccggtggattcaggattctggtggatcatact 811
>ref|NM_117019.3| Arabidopsis thaliana beta-fructofuranosidase AT4G09510 transcript variant AT4G09510.1 mRNA, complete cds Length = 2009 Score = 60.0 bits (30), Expect = 6e-06 Identities = 151/190 (79%), Gaps = 1/190 (0%) Strand = Plus / Plus Query: 6 ttggtaccatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggtgt 64 |||||||||| || |||| |||| ||| |||||||| ||| | |||||||| ||||||| Sbjct: 542 ttggtaccattgcagcttatgaccatgcctccgaggaggtcttgaactatgatcaggtgt 601 Query: 65 ttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattg 124 |||| | || || || || || || ||||||||||||||||||| ||||| || || | Sbjct: 602 ttgtacgtgactttgtaccaagtgcattggcgtttctgatgaatggagagcccgatatag 661 Query: 125 tcaagaacttcctgctcaagaccgttttgttgcagggttgggagaagaaggttgatcggt 184 | || |||||| |||||||||| || | | || ||||||||||| |||||| |||| Sbjct: 662 tgaaaaacttcttgctcaagacacttcagcttcaaggttgggagaaacgggttgaccggt 721 Query: 185 ttaagcttgg 194 | |||||||| Sbjct: 722 tcaagcttgg 731 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 832 gcaccggtggattcaggattctggtggatcatact 866
>gb|DQ138370.1| Manihot esculenta neutral/alkaline invertase (nINV1) mRNA, complete cds Length = 2082 Score = 60.0 bits (30), Expect = 6e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 52 tatgaccaggtgtttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggc 111 ||||| ||||| ||||| ||||||| || || || ||| |||| |||||||||||||| Sbjct: 566 tatgatcaggtttttgtacgagattttgtacctagtgccctggcttttctgatgaatggt 625 Query: 112 gagccggagattgtcaagaacttcct 137 ||||| ||||| || ||||||||||| Sbjct: 626 gagcctgagatagttaagaacttcct 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 265 gattttggtgagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatc 324 |||||||||||||| |||||||| | || || || || || || || |||||||||||| Sbjct: 779 gattttggtgagagtgcaattggaagagtagctcctgttgactctggtttctggtggatc 838 Query: 325 atactattgcgggcctacacaaagtccaccggggatttgactctggcagaga 376 || || ||||| || || || ||||| || ||||||||| |||| ||||||| Sbjct: 839 attctgttgcgtgcatataccaagtctactggggatttgtctcttgcagaga 890 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 178 gatcggtttaagcttggtgagggggccatgcctgcaagctttaaagtgcttcatga 233 ||||| || ||||||||||| ||||| ||||| || ||||||||||| |||||||| Sbjct: 692 gatcgattcaagcttggtgaaggggcaatgccagctagctttaaagttcttcatga 747
>emb|BX826649.1|CNS0A3ZG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB50ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1902 Score = 60.0 bits (30), Expect = 6e-06 Identities = 115/142 (80%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 6 ttggtaccatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggtgt 64 |||||||||| || |||| |||| ||| |||||||| ||| | |||||||| ||||||| Sbjct: 451 ttggtaccattgcagcttatgaccatgcctccgaggaggtcttgaactatgatcaggtgt 510 Query: 65 ttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattg 124 |||| | || || || || || || ||||||||||||||||||| ||||| || || | Sbjct: 511 ttgtacgtgactttgtaccaagtgcattggcgtttctgatgaatggagagcccgatatag 570 Query: 125 tcaagaacttcctgctcaagac 146 | || |||||| |||||||||| Sbjct: 571 tgaaaaacttcttgctcaagac 592 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 741 gcaccggtggattcaggattctggtggatcatact 775
>emb|BX826630.1|CNS0A46P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1833 Score = 60.0 bits (30), Expect = 6e-06 Identities = 151/190 (79%), Gaps = 1/190 (0%) Strand = Plus / Plus Query: 6 ttggtaccatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggtgt 64 |||||||||| || |||| |||| ||| |||||||| ||| | |||||||| ||||||| Sbjct: 389 ttggtaccattgcagcttatgaccatgcctccgaggaggtcttgaactatgatcaggtgt 448 Query: 65 ttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattg 124 |||| | || || || || || || ||||||||||||||||||| ||||| || || | Sbjct: 449 ttgtacgtgactttgtaccaagtgcattggcgtttctgatgaatggagagcccgatatag 508 Query: 125 tcaagaacttcctgctcaagaccgttttgttgcagggttgggagaagaaggttgatcggt 184 | || |||||| |||||||||| || | | || ||||||||||| |||||| |||| Sbjct: 509 tgaaaaacttcttgctcaagacacttcagcttcaaggttgggagaaacgggttgaccggt 568 Query: 185 ttaagcttgg 194 | |||||||| Sbjct: 569 tcaagcttgg 578 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 679 gcaccggtggattcaggattctggtggatcatact 713
>emb|BX827892.1|CNS0A2G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2007 Score = 60.0 bits (30), Expect = 6e-06 Identities = 115/142 (80%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 6 ttggtaccatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggtgt 64 |||||||||| || |||| |||| ||| |||||||| ||| | |||||||| ||||||| Sbjct: 544 ttggtaccattgcagcttatgaccatgcctccgaggaggtcttgaactatgatcaggtgt 603 Query: 65 ttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattg 124 |||| | || || || || || || ||||||||||||||||||| ||||| || || | Sbjct: 604 ttgtacgtgactttgtaccaagtgcattggcgtttctgatgaatggagagcccgatatag 663 Query: 125 tcaagaacttcctgctcaagac 146 | || |||||| |||||||||| Sbjct: 664 tgaaaaacttcttgctcaagac 685 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 834 gcaccggtggattcaggattctggtggatcatact 868
>gb|AY089010.1| Arabidopsis thaliana clone 156092 mRNA, complete sequence Length = 1944 Score = 60.0 bits (30), Expect = 6e-06 Identities = 115/142 (80%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 6 ttggtaccatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggtgt 64 |||||||||| || |||| |||| ||| |||||||| ||| | |||||||| ||||||| Sbjct: 476 ttggtaccattgcagcttatgaccatgcctccgaggaggtcttgaactatgatcaggtgt 535 Query: 65 ttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattg 124 |||| | || || || || || || ||||||||||||||||||| ||||| || || | Sbjct: 536 ttgtacgtgactttgtaccaagtgcattggcgtttctgatgaatggagagcccgatatag 595 Query: 125 tcaagaacttcctgctcaagac 146 | || |||||| |||||||||| Sbjct: 596 tgaaaaacttcttgctcaagac 617 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 766 gcaccggtggattcaggattctggtggatcatact 800
>dbj|AK176880.1| Arabidopsis thaliana mRNA for neutral invertase like protein, complete cds, clone: RAFL25-43-P12 Length = 2022 Score = 60.0 bits (30), Expect = 6e-06 Identities = 151/190 (79%), Gaps = 1/190 (0%) Strand = Plus / Plus Query: 6 ttggtaccatcgccgctttcgacc-tgcatccgaggaagtcctaaactatgaccaggtgt 64 |||||||||| || |||| |||| ||| |||||||| ||| | |||||||| ||||||| Sbjct: 522 ttggtaccattgcagcttatgaccatgcctccgaggaggtcttgaactatgatcaggtgt 581 Query: 65 ttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccggagattg 124 |||| | || || || || || || ||||||||||||||||||| ||||| || || | Sbjct: 582 ttgtacgtgactttgtaccaagtgcattggcgtttctgatgaatggagagcccgatatag 641 Query: 125 tcaagaacttcctgctcaagaccgttttgttgcagggttgggagaagaaggttgatcggt 184 | || |||||| |||||||||| || | | || ||||||||||| |||||| |||| Sbjct: 642 tgaaaaacttcttgctcaagacacttcagcttcaaggttgggagaaacgggttgaccggt 701 Query: 185 ttaagcttgg 194 | |||||||| Sbjct: 702 tcaagcttgg 711 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 812 gcaccggtggattcaggattctggtggatcatact 846
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 265 gattttggtgagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatc 324 |||||||||||||| ||||||||| |||| || |||||||| || || || |||||||| Sbjct: 90108 gattttggtgagagtgcaattgggagggtggctccagtggactctggattttggtggatt 90049 Query: 325 atactattgcgggcctacacaaagt 349 || ||| | ||||| || ||||||| Sbjct: 90048 attctactccgggcatatacaaagt 90024 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 397 atgaggctcattctgagcctgtgcttgtctgagggatttgataccttc 444 |||||||| || |||| ||| ||||| ||||||||||||||||||||| Sbjct: 89976 atgaggctgatactgaacctatgcttatctgagggatttgataccttc 89929
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 265 gattttggtgagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatc 324 |||||||||||||| ||||||||| |||| || |||||||| || || || |||||||| Sbjct: 3722436 gattttggtgagagtgcaattgggagggtggctccagtggactctggattttggtggatt 3722377 Query: 325 atactattgcgggcctacacaaagt 349 || ||| | ||||| || ||||||| Sbjct: 3722376 attctactccgggcatatacaaagt 3722352 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 397 atgaggctcattctgagcctgtgcttgtctgagggatttgataccttc 444 |||||||| || |||| ||| ||||| ||||||||||||||||||||| Sbjct: 3722304 atgaggctgatactgaacctatgcttatctgagggatttgataccttc 3722257
>dbj|AK070884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068M15, full insert sequence Length = 2321 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 265 gattttggtgagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatc 324 |||||||||||||| ||||||||| |||| || |||||||| || || || |||||||| Sbjct: 891 gattttggtgagagtgcaattgggagggtggctccagtggactctggattttggtggatt 950 Query: 325 atactattgcgggcctacacaaagt 349 || ||| | ||||| || ||||||| Sbjct: 951 attctactccgggcatatacaaagt 975 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 397 atgaggctcattctgagcctgtgcttgtctgagggatttgataccttc 444 |||||||| || |||| ||| ||||| ||||||||||||||||||||| Sbjct: 1023 atgaggctgatactgaacctatgcttatctgagggatttgataccttc 1070
>dbj|D21823.1|LILLIM17 Lilium longiflorum LIM17 mRNA, partial cds, clone:plim17 Length = 2119 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 aactatgaccaggtgtttgtgagagatttcgtgcccagcgccatggcgtttctgatgaat 108 |||||| | ||||||||||| ||||||||| | || || | |||| ||||||||||| Sbjct: 525 aactataatcaggtgtttgtaagagatttcttccctagtggattggcatttctgatgaaa 584 Query: 109 ggcgagccggagattgtcaagaacttcct 137 || |||||||| || |||||||||||||| Sbjct: 585 ggggagccggaaatcgtcaagaacttcct 613
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 265 gattttggtgagagcgcaattgggcgggttgcaccagtggattcggggttctggtggatc 324 |||||||||||||| ||||||||| |||| || |||||||| || || || |||||||| Sbjct: 3731130 gattttggtgagagtgcaattgggagggtggctccagtggactctggattttggtggatt 3731071 Query: 325 atactattgcgggcctacacaaagt 349 || ||| | ||||| || ||||||| Sbjct: 3731070 attctactccgggcatatacaaagt 3731046 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 397 atgaggctcattctgagcctgtgcttgtctgagggatttgataccttc 444 |||||||| || |||| ||| ||||| ||||||||||||||||||||| Sbjct: 3730998 atgaggctgatactgaacctatgcttatctgagggatttgataccttc 3730951
>ref|NM_001036713.1| Arabidopsis thaliana beta-fructofuranosidase AT4G34860 transcript variant AT4G34860.2 mRNA, complete cds Length = 2618 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 382 gaatgccagaaggcaatgaggctcattctgagcctgtgcttgtctgagggatttgatacc 441 ||||||||||||| || |||| || || |||||||| |||||||||||||||||||| Sbjct: 1037 gaatgccagaagggtattcggctgatacttagcctgtgtctgtctgagggatttgatacc 1096 Query: 442 ttc 444 ||| Sbjct: 1097 ttc 1099 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 aactatgaccaggtgtttgtgagagattt 77 |||||||| |||||||| ||||||||||| Sbjct: 704 aactatgatcaggtgttcgtgagagattt 732
>ref|NM_119652.2| Arabidopsis thaliana beta-fructofuranosidase AT4G34860 transcript variant AT4G34860.1 mRNA, complete cds Length = 2737 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 382 gaatgccagaaggcaatgaggctcattctgagcctgtgcttgtctgagggatttgatacc 441 ||||||||||||| || |||| || || |||||||| |||||||||||||||||||| Sbjct: 1156 gaatgccagaagggtattcggctgatacttagcctgtgtctgtctgagggatttgatacc 1215 Query: 442 ttc 444 ||| Sbjct: 1216 ttc 1218 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 aactatgaccaggtgtttgtgagagattt 77 |||||||| |||||||| ||||||||||| Sbjct: 823 aactatgatcaggtgttcgtgagagattt 851
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 382 gaatgccagaaggcaatgaggctcattctgagcctgtgcttgtctgagggatttgatacc 441 ||||||||||||| || |||| || || |||||||| |||||||||||||||||||| Sbjct: 65958 gaatgccagaagggtattcggctgatacttagcctgtgtctgtctgagggatttgatacc 65899 Query: 442 ttc 444 ||| Sbjct: 65898 ttc 65896
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 54.0 bits (27), Expect = 4e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 92 tggcgtttctgatgaatggcgagccggagattgtcaagaacttcctgctcaagaccgttt 151 ||||||||||||||||||| ||||| || || || || |||||| |||||||||| || Sbjct: 40424 tggcgtttctgatgaatggagagcccgatatagtgaaaaacttcttgctcaagacacttc 40365 Query: 152 tgttgcagggttgggagaagaaggttgatcggtttaagcttgg 194 | | || ||||||||||| |||||| ||||| |||||||| Sbjct: 40364 agcttcaaggttgggagaaacgggttgaccggttcaagcttgg 40322 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 40221 gcaccggtggattcaggattctggtggatcatact 40187
>emb|AL079347.1|ATF11I11 Arabidopsis thaliana DNA chromosome 4, BAC clone F11I11 (ESSA project) Length = 103150 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 382 gaatgccagaaggcaatgaggctcattctgagcctgtgcttgtctgagggatttgatacc 441 ||||||||||||| || |||| || || |||||||| |||||||||||||||||||| Sbjct: 36500 gaatgccagaagggtattcggctgatacttagcctgtgtctgtctgagggatttgatacc 36441 Query: 442 ttc 444 ||| Sbjct: 36440 ttc 36438
>gb|AY050417.1| Arabidopsis thaliana AT4g34860/F11I11_100 mRNA, complete cds Length = 2330 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 382 gaatgccagaaggcaatgaggctcattctgagcctgtgcttgtctgagggatttgatacc 441 ||||||||||||| || |||| || || |||||||| |||||||||||||||||||| Sbjct: 1156 gaatgccagaagggtattcggctgatacttagcctgtgtctgtctgagggatttgatacc 1215 Query: 442 ttc 444 ||| Sbjct: 1216 ttc 1218 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 aactatgaccaggtgtttgtgagagattt 77 |||||||| |||||||| ||||||||||| Sbjct: 823 aactatgatcaggtgttcgtgagagattt 851
>gb|BT002695.1| Arabidopsis thaliana At4g34860/F11I11_100 gene, complete cds Length = 1716 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 382 gaatgccagaaggcaatgaggctcattctgagcctgtgcttgtctgagggatttgatacc 441 ||||||||||||| || |||| || || |||||||| |||||||||||||||||||| Sbjct: 751 gaatgccagaagggtattcggctgatacttagcctgtgtctgtctgagggatttgatacc 810 Query: 442 ttc 444 ||| Sbjct: 811 ttc 813 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 aactatgaccaggtgtttgtgagagattt 77 |||||||| |||||||| ||||||||||| Sbjct: 418 aactatgatcaggtgttcgtgagagattt 446
>gb|AC006567.1|AC006567 Arabidopsis thaliana BAC T15G18 from chromosome IV, near 25 cM, complete sequence Length = 113800 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 92 tggcgtttctgatgaatggcgagccggagattgtcaagaacttcctgctcaagac 146 ||||||||||||||||||| ||||| || || || || |||||| |||||||||| Sbjct: 28882 tggcgtttctgatgaatggagagcccgatatagtgaaaaacttcttgctcaagac 28936 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatact 329 ||||| |||||||| || ||||||||||||||||| Sbjct: 29085 gcaccggtggattcaggattctggtggatcatact 29119
>gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana BAC F15O4 from chromosome I, complete sequence Length = 158096 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 59 aggtgtttgtgagagatttcgtgcccagcgccatggcgtttctgatgaatggcgagccgg 118 ||||||||||||| ||||| || || || || ||||||||||||||||||| || |||| Sbjct: 95112 aggtgtttgtgagggattttgtaccgagtgcgttggcgtttctgatgaatggagaaccgg 95171 Query: 119 a 119 | Sbjct: 95172 a 95172
>gb|BT013625.1| Lycopersicon esculentum clone 132427R, mRNA sequence Length = 1956 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 304 gattcggggttctggtggatcatactattgcgggcctacacaaagtccaccgggga 359 ||||| |||||||||||||| |||||| | || || ||||||||||| || ||||| Sbjct: 808 gattcagggttctggtggattatactacttcgtgcatacacaaagtctacagggga 863
>gb|BT013509.1| Lycopersicon esculentum clone 132200F, mRNA sequence Length = 2095 Score = 46.1 bits (23), Expect = 0.097 Identities = 50/59 (84%) Strand = Plus / Plus Query: 49 aactatgaccaggtgtttgtgagagatttcgtgcccagcgccatggcgtttctgatgaa 107 |||||||| ||||||||||| |||||||| || || || || |||| ||||||||||| Sbjct: 594 aactatgatcaggtgtttgtcagagattttgttccaagtgcactggcttttctgatgaa 652
>ref|NM_105858.1| Arabidopsis thaliana beta-fructofuranosidase AT1G72000 mRNA, complete cds Length = 1500 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 187 aagcttggtgagggggccatgcctgcaagctttaaagt 224 ||||||||||| || || ||||| |||||||||||||| Sbjct: 343 aagcttggtgacggcgcaatgccagcaagctttaaagt 380 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 tttctgatgaatggcgagccggagattgtcaagaactt 134 |||||||||||||| ||||| || ||||| |||||||| Sbjct: 253 tttctgatgaatggagagcctgaaattgtgaagaactt 290
>gb|DQ487286.1| Viscum album subsp. album neutral invertase 2 mRNA, partial cds Length = 888 Score = 44.1 bits (22), Expect = 0.38 Identities = 55/66 (83%) Strand = Plus / Plus Query: 295 gcaccagtggattcggggttctggtggatcatactattgcgggcctacacaaagtccacc 354 ||||| || ||||| |||||||||||||| || || |||| || ||||||||||| || Sbjct: 5 gcacctgttgattctgggttctggtggataattcttctgcgcgcttacacaaagtctact 64 Query: 355 ggggat 360 |||||| Sbjct: 65 ggggat 70
>gb|DQ487285.1| Viscum album subsp. album neutral invertase mRNA, partial cds Length = 888 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 292 gttgcaccagtggattcggggttctggtggatcatact 329 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 2 gttgcacctgttgattctgggttttggtggatcatact 39
>gb|BT011836.1| Arabidopsis thaliana At1g72000 mRNA sequence Length = 1497 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 187 aagcttggtgagggggccatgcctgcaagctttaaagt 224 ||||||||||| || || ||||| |||||||||||||| Sbjct: 340 aagcttggtgacggcgcaatgccagcaagctttaaagt 377 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 tttctgatgaatggcgagccggagattgtcaagaactt 134 |||||||||||||| ||||| || ||||| |||||||| Sbjct: 250 tttctgatgaatggagagcctgaaattgtgaagaactt 287
>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete sequence Length = 216106 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 412 agcctgtgcttgtctgagggat 433 |||||||||||||||||||||| Sbjct: 2475 agcctgtgcttgtctgagggat 2496
>gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17M19 genomic sequence, complete sequence Length = 80413 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 187 aagcttggtgagggggccatgcctgcaagctttaaagt 224 ||||||||||| || || ||||| |||||||||||||| Sbjct: 76149 aagcttggtgacggcgcaatgccagcaagctttaaagt 76186 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 tttctgatgaatggcgagccggagattgtcaagaactt 134 |||||||||||||| ||||| || ||||| |||||||| Sbjct: 76059 tttctgatgaatggagagcctgaaattgtgaagaactt 76096
>gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28P5 genomic sequence, complete sequence Length = 38629 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 97 tttctgatgaatggcgagccggagattgtcaagaactt 134 |||||||||||||| ||||| || ||||| |||||||| Sbjct: 37689 tttctgatgaatggagagcctgaaattgtgaagaactt 37652 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 187 aagcttggtgagggggccatgcctgcaagctttaaagt 224 ||||||||||| || || ||||| |||||||||||||| Sbjct: 37599 aagcttggtgacggcgcaatgccagcaagctttaaagt 37562
>gb|AC100269.7| Mus musculus chromosome 5, clone RP23-67B9, complete sequence Length = 237273 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 atgaggctcattctgagcctg 417 ||||||||||||||||||||| Sbjct: 210848 atgaggctcattctgagcctg 210868
>gb|AC115007.6| Mus musculus chromosome 5, clone RP24-188P11, complete sequence Length = 155084 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 atgaggctcattctgagcctg 417 ||||||||||||||||||||| Sbjct: 98593 atgaggctcattctgagcctg 98613 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,034,316 Number of Sequences: 3902068 Number of extensions: 3034316 Number of successful extensions: 48677 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48491 Number of HSP's gapped (non-prelim): 178 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
