ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7b18 |
|---|---|
| Clone Library Name | barley_pub |
>ERG1_PANGI (O48651) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 539 Score = 274 bits (700), Expect = 9e-74 Identities = 128/153 (83%), Positives = 144/153 (94%) Frame = +1 Query: 13 EKFHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEE 192 EKFHSDVAGRSFHNGRF+QRMREKAASLPNV++EQGTVTSL+E+ G+VKGVQYK K G+E Sbjct: 162 EKFHSDVAGRSFHNGRFVQRMREKAASLPNVRMEQGTVTSLVEKKGSVKGVQYKTKDGQE 221 Query: 193 LKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPIL 372 L A+APLTIVCDGCFSNLRR+LC+PKVEVPSCFVGL+LEN LPH NHGHVILA+PSPIL Sbjct: 222 LSAFAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLILENIDLPHINHGHVILADPSPIL 281 Query: 373 FYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 FY ISSTE+RCLVDVPGQKVP I++GE+ANYLK Sbjct: 282 FYKISSTEIRCLVDVPGQKVPCISNGELANYLK 314
>ERG11_ARATH (O65404) Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene| epoxidase 1,1) (SE 1,1) Length = 516 Score = 171 bits (432), Expect = 1e-42 Identities = 83/151 (54%), Positives = 110/151 (72%) Frame = +1 Query: 19 FHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELK 198 F D + RSFHNGRF+QR+R+KA+SLPNV+LE+GTV SL+EE G +KGV YK +GEE Sbjct: 137 FPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETT 196 Query: 199 AYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFY 378 A APLT+VCDGC+SNLRR+L EV S VG + +NCQL +I++ PS + Y Sbjct: 197 ALAPLTVVCDGCYSNLRRSLNDNNAEVLSYQVGFISKNCQLEEPEKLKLIMSKPSFTMLY 256 Query: 379 PISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 ISST+VRC+ +V +PSI++GEMA ++K Sbjct: 257 QISSTDVRCVFEVLPNNIPSISNGEMATFVK 287
>ERG11_BRANA (O65727) Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene| epoxidase 1,1) (SE 1,1) Length = 506 Score = 167 bits (424), Expect = 1e-41 Identities = 82/151 (54%), Positives = 111/151 (73%) Frame = +1 Query: 19 FHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELK 198 F + GR+F+NGRF+QR+R+KA+SLP VQLE+GTV SL+EE G +KGV YK +GEE Sbjct: 138 FPYEPTGRAFYNGRFVQRLRQKASSLPTVQLEEGTVKSLIEEKGVIKGVTYKNSAGEETT 197 Query: 199 AYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFY 378 A+APLT+VCDGC+SNLRR++ EV S VG V +NCQL +I++ PS + Y Sbjct: 198 AFAPLTVVCDGCYSNLRRSVNDNNAEVISYQVGYVSKNCQLEDPEKLKLIMSKPSFTMLY 257 Query: 379 PISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 ISST+VRC++++ +PSI++GEMA YLK Sbjct: 258 QISSTDVRCVMEIFPGNIPSISNGEMAVYLK 288
>ERG12_BRANA (O65726) Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene| epoxidase 1,2) (SE 1,2) Length = 518 Score = 166 bits (420), Expect = 3e-41 Identities = 77/151 (50%), Positives = 111/151 (73%) Frame = +1 Query: 19 FHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELK 198 F + +GR FHNGRF+QR+R+KA+SLPNV+LE+GTV SL+EE G VKGV YK SGEE Sbjct: 139 FPYEPSGRFFHNGRFVQRLRQKASSLPNVRLEEGTVRSLIEEKGVVKGVTYKNSSGEETT 198 Query: 199 AYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFY 378 ++APLT+VCDGC SNLRR+L EV + +G + NC+L + H+I+A PS + Y Sbjct: 199 SFAPLTVVCDGCHSNLRRSLNDNNAEVTAYEIGYISRNCRLEQPDKLHLIMAKPSFAMLY 258 Query: 379 PISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 +SST+VRC ++ + +PS+++GEM ++++ Sbjct: 259 QVSSTDVRCNFELLSKNLPSVSNGEMTSFVR 289
>ERG13_ARATH (O65403) Squalene monooxygenase 2 (EC 1.14.99.7) (Squalene| epoxidase 2) (SE 2) Length = 516 Score = 164 bits (414), Expect = 1e-40 Identities = 80/153 (52%), Positives = 107/153 (69%) Frame = +1 Query: 13 EKFHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEE 192 + F + GR NGR +QR+R+KAASL NVQLE+GTV SL+EE G VKGV YK +GEE Sbjct: 132 KSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGVTYKNSAGEE 191 Query: 193 LKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPIL 372 + A+APLT+VCDGC+SNLRR+L EV S VG V +N +L + H+I + P + Sbjct: 192 ITAFAPLTVVCDGCYSNLRRSLVDNTEEVLSYMVGYVTKNSRLEDPHSLHLIFSKPLVCV 251 Query: 373 FYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 Y I+S EVRC+ +VP +PSI++GEM+ +LK Sbjct: 252 IYQITSDEVRCVAEVPADSIPSISNGEMSTFLK 284
>ERG12_ARATH (O65402) Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene| epoxidase 1,2) (SE 1,2) Length = 517 Score = 162 bits (410), Expect = 4e-40 Identities = 83/152 (54%), Positives = 107/152 (70%), Gaps = 1/152 (0%) Frame = +1 Query: 19 FHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELK 198 F + + RSFHNGRF+Q++R KA SL NV+LE+GTV SLLEE G VKGV YK K GEE Sbjct: 137 FSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGVTYKNKEGEETT 196 Query: 199 AYAPLTIVCDGCFSNLRRALCSP-KVEVPSCFVGLVLENCQLPHANHGHVILANPSPILF 375 A APLT+VCDGC+SNLRR+L E+ S VG + +NC+L H+IL+ PS + Sbjct: 197 ALAPLTVVCDGCYSNLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLILSKPSFTMV 256 Query: 376 YPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 Y ISST+VRC +V + PSIA+GEM+ ++K Sbjct: 257 YQISSTDVRCGFEVLPENFPSIANGEMSTFMK 288
>ERG1_HUMAN (Q14534) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 574 Score = 130 bits (326), Expect = 2e-30 Identities = 67/132 (50%), Positives = 90/132 (68%), Gaps = 1/132 (0%) Frame = +1 Query: 34 AGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELKA-YAP 210 +GR+FH+GRFI +R+ A + PN + +G V LLEE+ V GVQYK K ++K +AP Sbjct: 220 SGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKELHAP 279 Query: 211 LTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFYPISS 390 LT+V DG FS R++L S KV V S FVG +++N ANH +ILANPSP+L Y ISS Sbjct: 280 LTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYRISS 339 Query: 391 TEVRCLVDVPGQ 426 +E R LVD+ G+ Sbjct: 340 SETRVLVDIRGE 351
>ERG1_MOUSE (P52019) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 572 Score = 120 bits (300), Expect = 2e-27 Identities = 62/132 (46%), Positives = 88/132 (66%), Gaps = 1/132 (0%) Frame = +1 Query: 34 AGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIK-SGEELKAYAP 210 +G +FH+GRFI +R+ A + PNV+ +G V LLEE+ V GVQYK K +G+ + +AP Sbjct: 218 SGIAFHHGRFIMSLRKAAMAEPNVKFIEGVVLQLLEEDDAVIGVQYKDKETGDTKELHAP 277 Query: 211 LTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFYPISS 390 LT+V DG FS R++L S KV V S FVG ++++ N ++L NPSP+L Y ISS Sbjct: 278 LTVVADGLFSKFRKSLISSKVSVSSHFVGFLMKDAPQFKPNFAELVLVNPSPVLIYQISS 337 Query: 391 TEVRCLVDVPGQ 426 +E R LVD+ G+ Sbjct: 338 SETRVLVDIRGE 349
>ERG1_RAT (P52020) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 573 Score = 115 bits (289), Expect = 4e-26 Identities = 60/132 (45%), Positives = 87/132 (65%), Gaps = 1/132 (0%) Frame = +1 Query: 34 AGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIK-SGEELKAYAP 210 +G +FH+G+FI +R+ A + PNV+ +G V LLEE+ V GVQYK K +G+ + +AP Sbjct: 219 SGVAFHHGKFIMSLRKAAMAEPNVKFIEGVVLRLLEEDDAVIGVQYKDKETGDTKELHAP 278 Query: 211 LTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFYPISS 390 LT+V DG FS R+ L S KV V S FVG ++++ AN ++L +PSP+L Y IS Sbjct: 279 LTVVADGLFSKFRKNLISNKVSVSSHFVGFIMKDAPQFKANFAELVLVDPSPVLIYQISP 338 Query: 391 TEVRCLVDVPGQ 426 +E R LVD+ G+ Sbjct: 339 SETRVLVDIRGE 350
>ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99.7) (Squalene| epoxidase) (SE) Length = 457 Score = 110 bits (276), Expect = 1e-24 Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 3/136 (2%) Frame = +1 Query: 37 GRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLL--EENGTVKGVQYKIKSGEELKAY-A 207 G FH GRF+ +R+ S PNV + + TV LL E + GV K E Y A Sbjct: 101 GIGFHYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEVITGVVTSSKKSESPVEYKA 160 Query: 208 PLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFYPIS 387 PLTIVCDGCFS R+A ++V F+GL+L N GHVIL+ +P++ YPIS Sbjct: 161 PLTIVCDGCFSKFRKAFIDHPIQVTDHFLGLILTNPDYIAPGRGHVILSKVAPMVLYPIS 220 Query: 388 STEVRCLVDVPGQKVP 435 STE R L++ PG+ +P Sbjct: 221 STEARILINYPGKNLP 236
>ERG1_CANAL (Q92206) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 496 Score = 98.2 bits (243), Expect = 9e-21 Identities = 60/155 (38%), Positives = 82/155 (52%), Gaps = 4/155 (2%) Frame = +1 Query: 19 FHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENG---TVKGVQYKIKSGE 189 F V G +FH+G F+ +R+ PNV + TVT +L + TV GVQ K SG Sbjct: 129 FDERVRGAAFHHGDFLMNLRQICRDEPNVTAVEATVTKILRDPSDPNTVIGVQTKQPSGT 188 Query: 190 ELKAYAPLTIVCDGCFSNLRRALCSPKVE-VPSCFVGLVLENCQLPHANHGHVILANPSP 366 + +A LTI CDG +S R+ L V + S F+GL L+N +LP GHV+L +P Sbjct: 189 -VDYHAKLTISCDGIYSKFRKELSPTNVPTIGSYFIGLYLKNAELPAKGKGHVLLGGHAP 247 Query: 367 ILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 L Y +S TE R L K PS A+ + YL+ Sbjct: 248 ALIYSVSPTETRVLCVYVSSKPPSAANDAVYKYLR 282
>ERG1_CANGA (O13306) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 489 Score = 83.2 bits (204), Expect = 3e-16 Identities = 54/132 (40%), Positives = 70/132 (53%), Gaps = 3/132 (2%) Frame = +1 Query: 52 NGRFIQRMREKAASLPNVQLEQGTVTSLLEEN-GTVKGVQYKIKSGEELKAYAPLTIVCD 228 +GRF+ +R A+ PNV QG V +L++ V G + + S ++ A LT VCD Sbjct: 143 HGRFLNNLRNICAAEPNVTRLQGNVVEILKDKKNEVVGAKVDVDSRGKVDFKAHLTFVCD 202 Query: 229 GCFSNLRRALCSPKVE-VPSCFVGLVLENCQLPHANHGHVILANP-SPILFYPISSTEVR 402 G FS RR L V V S FVG+ L + +PH HGHVIL + PIL Y IS E R Sbjct: 203 GIFSRFRRELHPDHVPTVNSSFVGMSLYHAHMPHDMHGHVILGDKHMPILVYQISPEETR 262 Query: 403 CLVDVPGQKVPS 438 L KVP+ Sbjct: 263 ILCAYNAPKVPT 274
>ERG1_YEAST (P32476) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 496 Score = 79.7 bits (195), Expect = 3e-15 Identities = 54/137 (39%), Positives = 71/137 (51%), Gaps = 3/137 (2%) Frame = +1 Query: 37 GRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLL-EENGTVKGVQYKIKSGEELKAYAPL 213 G +F +GRF+ +R A PNV QG +L +E V G + I +++ A L Sbjct: 145 GVAFVHGRFLNNLRNITAQEPNVTRVQGNCIEILKDEKNEVVGAKVDIDGRGKVEFKAHL 204 Query: 214 TIVCDGCFSNLRRALCSPKVE-VPSCFVGLVLENCQLPHANHGHVIL-ANPSPILFYPIS 387 T +CDG FS R+ L V V S FVG+ L N + P HGHVIL ++ PIL Y IS Sbjct: 205 TFICDGIFSRFRKELHPDHVPTVGSSFVGMSLFNAKNPAPMHGHVILGSDHMPILVYQIS 264 Query: 388 STEVRCLVDVPGQKVPS 438 E R L KVP+ Sbjct: 265 PEETRILCAYNSPKVPA 281
>ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 497 Score = 77.4 bits (189), Expect = 2e-14 Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Frame = +1 Query: 37 GRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGT-VKGVQYKIKSGEELKAYAPL 213 G F +GRF+Q +R A+ V QG V S+L + V G + + ++ A + Sbjct: 146 GVGFVHGRFLQNLRAICAAEDRVTRLQGNVISILRNDSKEVIGAKVDVPGRGKVDFKAHM 205 Query: 214 TIVCDGCFSNLRRALCSPKV-EVPSCFVGLVLENCQLPHANHGHVILANP-SPILFYPIS 387 T VCDG FS R+ L + +V S FVGL L + LP +HGHVIL + P++ Y IS Sbjct: 206 TFVCDGIFSRFRKELSTTNTSKVWSSFVGLSLHHADLPTKHHGHVILGSEHMPVIAYQIS 265 Query: 388 STEVRCL 408 STE R L Sbjct: 266 STETRIL 272
>GIDA_BACTN (Q8A2N7) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 628 Score = 34.3 bits (77), Expect = 0.16 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +1 Query: 58 RFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGV 165 +FI REK + PN+ + Q TV LL ENG V G+ Sbjct: 101 KFIWSWREKLENTPNLHIWQDTVCELLVENGEVVGL 136
>GIDA_BACFR (Q650H5) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 625 Score = 32.3 bits (72), Expect = 0.63 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = +1 Query: 58 RFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELKAYAPLTIVCDGCF 237 +FI RE ++PN+ + Q TV ++ ENG V G +K+ ++ +A ++ G F Sbjct: 101 KFIWAWREILENIPNLHIWQDTVKEIIVENGEVVG----LKTFWDVTFHARCIVLTAGTF 156 Query: 238 SN 243 N Sbjct: 157 LN 158
>GIDA_BACFN (Q5LIY5) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 625 Score = 32.3 bits (72), Expect = 0.63 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = +1 Query: 58 RFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELKAYAPLTIVCDGCF 237 +FI RE ++PN+ + Q TV ++ ENG V G +K+ ++ +A ++ G F Sbjct: 101 KFIWAWREILENIPNLHIWQDTVKEIIVENGEVVG----LKTFWDVTFHARCIVLTAGTF 156 Query: 238 SN 243 N Sbjct: 157 LN 158
>GIDA_MYCPN (P75221) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 612 Score = 32.0 bits (71), Expect = 0.82 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +1 Query: 76 REKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELKAYAPLTIVCDGCF 237 R++ PN++L G +LE NG VKGV + G EL + A IV G + Sbjct: 105 RQQIDQTPNIELIAGEAVDILESNGKVKGV--VLADGSELASDA--VIVTTGTY 154
>GIDA_CAMJR (Q5HTS6) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 619 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/56 (35%), Positives = 28/56 (50%) Frame = +1 Query: 76 REKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELKAYAPLTIVCDGCFSN 243 R K LPN+++ Q + L+ EN VKGV K+ E +A I+ G F N Sbjct: 104 RNKLLKLPNLEISQEQASVLIVENDEVKGV----KTNLENIYFAKKVILTTGTFLN 155
>GIDA_CAMJE (Q9PNA7) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 619 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/56 (35%), Positives = 28/56 (50%) Frame = +1 Query: 76 REKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELKAYAPLTIVCDGCFSN 243 R K LPN+++ Q + L+ EN VKGV K+ E +A I+ G F N Sbjct: 104 RNKLLKLPNLEISQEQASVLIVENDEVKGV----KTNLENIYFAKKVILTTGTFLN 155
>GIDA_THEMA (Q9WYA1) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 30.8 bits (68), Expect = 1.8 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +1 Query: 61 FIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGV 165 + + M+ K + PN+ L G V +L E G VKGV Sbjct: 109 YSRTMKRKLETNPNIVLRHGIVERILTEKGRVKGV 143
>FA10_TROCA (Q4QXT9) Coagulation factor X precursor (EC 3.4.21.6) [Contains:| Factor X light chain; Factor X heavy chain; Activated factor Xa heavy chain] Length = 483 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 10 GEKFHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVK 159 G+ +S VAG F GR I+ ++ ASLP+ Q + ++EN V+ Sbjct: 158 GDDGYSCVAGGDFSCGRNIKARNKREASLPDFQTDFSDDYDAIDENNFVE 207
>YURR_BACSU (O32159) Hypothetical oxidoreductase yurR (EC 1.-.-.-)| Length = 372 Score = 29.6 bits (65), Expect = 4.1 Identities = 25/71 (35%), Positives = 34/71 (47%) Frame = +1 Query: 31 VAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELKAYAP 210 ++G + NGR + R AA + +G SLL ENGTV GVQ K + A Sbjct: 145 ISGAARVNGRALCRSLLSAAEKRGATVIKGNA-SLLFENGTVTGVQTDTK-----QFAAD 198 Query: 211 LTIVCDGCFSN 243 IV G ++N Sbjct: 199 AVIVTAGAWAN 209
>ARAG_BACHD (Q9K7C3) L-arabinose transport ATP-binding protein araG (EC| 3.6.3.17) Length = 517 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +1 Query: 82 KAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSG 186 KA + N+++EQG + +L+ ENG K K+ SG Sbjct: 21 KALNNVNLKVEQGEIHALVGENGAGKSTLMKVLSG 55
>SMC4_XENLA (P50532) Structural maintenance of chromosome 4| (Chromosome-associated protein C) (Chromosome assembly protein XCAP-C) Length = 1290 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = +1 Query: 4 ARGEKFHSDVAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEEN 147 A+ EK D S + ++ M+EK +L +V+ + +T +EEN Sbjct: 333 AQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIEEN 380
>GIDA_GEOSL (Q746Q4) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 627 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +1 Query: 70 RMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKI 177 RM+ ++ L+QG VT L+ E+G V+GV K+ Sbjct: 110 RMKHVMEEQEHLSLKQGEVTGLVVEDGRVRGVVTKV 145
>DHA2_STAAW (Q8NW54) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 340 HVILANPSPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 H I++NP I Y S V V +PG K P + + +M +K Sbjct: 215 HTIMSNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMK 258
>DHA2_STAAS (Q6G8L8) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 340 HVILANPSPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 H I++NP I Y S V V +PG K P + + +M +K Sbjct: 215 HTIMSNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMK 258
>DHA2_STAAR (Q6GFZ8) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 340 HVILANPSPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 H I++NP I Y S V V +PG K P + + +M +K Sbjct: 215 HTIMSNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMK 258
>DHA2_STAAN (Q99TF4) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 340 HVILANPSPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 H I++NP I Y S V V +PG K P + + +M +K Sbjct: 215 HTIMSNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMK 258
>DHA2_STAAM (Q931P7) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 340 HVILANPSPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 H I++NP I Y S V V +PG K P + + +M +K Sbjct: 215 HTIMSNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMK 258
>DHA2_STAAC (Q5HF65) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 340 HVILANPSPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLK 471 H I++NP I Y S V V +PG K P + + +M +K Sbjct: 215 HTIMSNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMK 258
>FRDS_YEAST (P32614) Fumarate reductase (NADH) (EC 1.3.1.6) (NADH-dependent| fumarate reductase) (FAD-dependent oxidoreductase FRDS) Length = 470 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/58 (25%), Positives = 30/58 (51%) Frame = +1 Query: 64 IQRMREKAASLPNVQLEQGTVTSLLEENGTVKGVQYKIKSGEELKAYAPLTIVCDGCF 237 ++++ E L + L+ V + E++G++ V Y+ K+GE+ A + C G F Sbjct: 144 LKKLAETKPELVKINLDS-KVVDIHEKDGSISAVVYEDKNGEKHMVSANDVVFCSGGF 200
>GIDA_CHLCV (Q824M2) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 611 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 73 MREKAASLPNVQLEQGTVTSLLEENGTVKGVQYK 174 M+ S P + + QGTV SLL+ ++GV K Sbjct: 109 MKRLLESTPGLHIMQGTVESLLDNENVIQGVTTK 142
>PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene 1 protein) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a) Length = 788 Score = 28.9 bits (63), Expect = 6.9 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Frame = +1 Query: 256 LCSPKVEVPSCFVGLVLENCQLPHANHG------HVILANPSPILFYPISSTEVRCLVDV 417 LC P ++ VL N + P NH + A P + P+ T R L D Sbjct: 617 LCQPLLDA-------VLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLEDD 669 Query: 418 PGQKVPSIASGEMA 459 Q +PS+ GE+A Sbjct: 670 ERQSIPSVLQGEVA 683
>ZN683_HUMAN (Q8IZ20) Zinc finger protein 683| Length = 509 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3 Query: 216 NCVRWLLFELKACPL-LSKG*STVLLCRACLGELSTSSCEPWPCYLG 353 +C WL CPL L+ G S +L ACL +L + C P P LG Sbjct: 41 SCASWL------CPLPLAPGRSALL---ACLQDLDLNLCTPQPAPLG 78
>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 4391 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = +2 Query: 74 CVKKLHHCPMSNWSKEQLHLCLKKMVQLRVCNTRSSQVKN 193 C+ HC S+WS+ QLH ++ + N S+ N Sbjct: 926 CMGVSRHCTSSSWSRAQLHGASEEPGHFSLTNAASTHTTN 965
>GIDA_GLUOX (Q5FS12) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 618 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +1 Query: 73 MREKAASLPNVQLEQGTVTSLLEENGTVKGV 165 +++ A+ PN+ + +G L+EENG + GV Sbjct: 105 IQDLLAATPNLTILEGAAGDLIEENGRITGV 135
>GUAA_NITOC (Q3JDG3) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 524 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 61 FIQRMREKAASLPNVQ-LEQGTV-TSLLEENGTVKGVQYKIKS 183 FI+ E+AA LPN Q L QGT+ ++E G G IKS Sbjct: 314 FIEVFEEEAAKLPNAQWLAQGTIYPDVIESAGGKTGKAQVIKS 356
>GIDA_CHLAB (Q5L6Z0) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 611 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 73 MREKAASLPNVQLEQGTVTSLLEENGTVKGVQYK 174 M+ S P + + QGTV SLL+ ++GV K Sbjct: 109 MKRLLESSPGLHIMQGTVESLLDNENVIQGVTTK 142
>CAH14_MOUSE (Q9WVT6) Carbonic anhydrase 14 precursor (EC 4.2.1.1) (Carbonic| anhydrase XIV) (Carbonate dehydratase XIV) (CA-XIV) Length = 337 Score = 28.5 bits (62), Expect = 9.1 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -3 Query: 451 HHLLWRAPSGQGHLPNSEPRC 389 HH + P GQ H P S P C Sbjct: 20 HHWTYEGPHGQDHWPTSYPEC 40 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,988,199 Number of Sequences: 219361 Number of extensions: 1657648 Number of successful extensions: 4892 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4743 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4878 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
