ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7b10 |
|---|---|
| Clone Library Name | barley_pub |
>Y3846_ARATH (Q8LB17) Protein At3g58460| Length = 403 Score = 246 bits (628), Expect = 3e-65 Identities = 109/161 (67%), Positives = 137/161 (85%) Frame = +2 Query: 62 MRPNIVTEAGISTRLNQWWSSTPFITSGVTIICAAIYXVCLLIGYDSYAEICFLPSAVAS 241 MRPNIVTEAG+ TR+ QWW++ PF+TS V ++C IY +CLL GYD++ E+CFLPSA+ S Sbjct: 1 MRPNIVTEAGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIIS 60 Query: 242 HFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLLATTNAIFHLI 421 FQVYRFYT+++FHGSLLHVLFNM+ VP+G+ELERIMGSVRLL+L LLATTNA+ HL+ Sbjct: 61 RFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLL 120 Query: 422 VAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSGV 544 +A L YNP Y +L++EC+IGFSG++FSMIVIETSLSGV Sbjct: 121 IASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGV 161
>Y3761_ARATH (Q8RXW0) Protein At3g17611| Length = 334 Score = 56.6 bits (135), Expect = 4e-08 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%) Frame = +2 Query: 206 AEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMF 385 +E+ F P + H + R + S +H + H+++NM++ + G +LE MGS ++F Sbjct: 61 SEVWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVF 120 Query: 386 LLATTNAIFHLIVA----FLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETS 532 L + L++A L DY+ Y+ +E ++GFSGV+F+M V+ S Sbjct: 121 TLIGMSQGVTLLLAKSLLLLFDYDRAYY-----NEYAVGFSGVLFAMKVVLNS 168
>GLPG_HAEIN (P44783) Protein glpG homolog| Length = 192 Score = 51.2 bits (121), Expect = 2e-06 Identities = 35/128 (27%), Positives = 56/128 (43%) Frame = +2 Query: 134 ITSGVTIICAAIYXVCLLIGYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNM 313 IT +T +C IY L D + P+ +V+R+ + L H S LH+LFN+ Sbjct: 11 ITLILTALCVLIYLAQQLGFEDDIMYLMHYPAYEEQDSEVWRYISHTLVHLSNLHILFNL 70 Query: 314 LTFVPLGTELERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGF 493 F G +ER GSV+LL L + + Y +Y+ G Sbjct: 71 SWFFIFGGMIERTFGSVKLLMLYVVASAITG---------------YVQNYVSGPAFFGL 115 Query: 494 SGVIFSMI 517 SGV+++++ Sbjct: 116 SGVVYAVL 123
>GLPG_ECOLI (P09391) Protein glpG| Length = 276 Score = 47.0 bits (110), Expect = 4e-05 Identities = 24/87 (27%), Positives = 45/87 (51%) Frame = +2 Query: 134 ITSGVTIICAAIYXVCLLIGYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNM 313 +T + I C ++ ++G P F+ +R++T L H SL+H+LFN+ Sbjct: 96 VTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNL 155 Query: 314 LTFVPLGTELERIMGSVRLLFLMFLLA 394 L + LG +E+ +GS +L+ + + A Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITLISA 182
>RBD2_YARLI (Q6CDV6) Rhomboid protein 2 (EC 3.4.21.-)| Length = 297 Score = 43.5 bits (101), Expect = 4e-04 Identities = 26/99 (26%), Positives = 49/99 (49%) Frame = +2 Query: 221 LPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLLATT 400 L S ++F++ R L H + H+L N++ P+ ++ ER+ G+VR ++ +LA Sbjct: 47 LRSTALTNFELNRISFYPLVHATWFHLLLNLVALQPIVSQFERVNGTVRTGIVLNILAVV 106 Query: 401 NAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMI 517 AI +++ + + DE +G S IFS + Sbjct: 107 TAIPWCLLS----------IGFFPDEAVLGSSAWIFSFM 135
>RBD2_SCHPO (O74926) Rhomboid protein 2 (EC 3.4.21.-)| Length = 248 Score = 41.6 bits (96), Expect = 0.001 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%) Frame = +2 Query: 248 QVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLLATT-NAIFHLIV 424 Q+Y T V H S+LH++FN ++ +P ++ E+ G++ + + + T I HLIV Sbjct: 52 QLYEIITYVTLHLSMLHIVFNFVSLLPAMSQFEKKQGTLACILVTVIPYTLFPGIMHLIV 111 Query: 425 AFLVDYNPLYHVSYLVDECSI-GFSGVIFSMI 517 YH D SI G SG F+ I Sbjct: 112 ---------YHFFLRKDYVSIAGLSGWAFAFI 134
>CYB_PHYME (Q35522) Cytochrome b| Length = 383 Score = 33.5 bits (75), Expect = 0.40 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +2 Query: 341 LERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIV 520 +E IM V +LM A F IV ++ + LY+ SY+ ++ SGVI +++ Sbjct: 64 VEHIMRDVNNGWLMRYTHANGASFFFIVVYVHIFRGLYYGSYITPREALWCSGVIIFILM 123 Query: 521 IETSLSG 541 + T+ G Sbjct: 124 MATAFMG 130
>CYB_VICFA (P05718) Cytochrome b| Length = 392 Score = 32.3 bits (72), Expect = 0.89 Identities = 29/117 (24%), Positives = 46/117 (39%) Frame = +2 Query: 191 GYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRL 370 G+ S A IC + V F + V + FN +E +M V Sbjct: 37 GFGSLAGICLVIQIVTGVFLAMHYTPHV-------DLAFN---------SVEHVMRDVEG 80 Query: 371 LFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSG 541 +L+ + A LIV L + LYH SY + GV+ +++I T+ +G Sbjct: 81 GWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPREFVRCLGVVIFLLMIVTAFTG 137
>CYB_PEA (Q9ZZT8) Cytochrome b| Length = 392 Score = 32.3 bits (72), Expect = 0.89 Identities = 29/117 (24%), Positives = 46/117 (39%) Frame = +2 Query: 191 GYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRL 370 G+ S A IC + V F + V + FN +E +M V Sbjct: 37 GFGSLAGICLVIQIVTGVFLAMHYTPHV-------DLAFN---------SVEHVMRDVEG 80 Query: 371 LFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSG 541 +L+ + A LIV L + LYH SY + GV+ +++I T+ +G Sbjct: 81 GWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPREFVRCLGVVIFLLMIVTAFTG 137
>RBD2_GIBZE (Q4I4A4) Rhomboid protein 2 (EC 3.4.21.-)| Length = 267 Score = 31.6 bits (70), Expect = 1.5 Identities = 33/156 (21%), Positives = 66/156 (42%) Frame = +2 Query: 62 MRPNIVTEAGISTRLNQWWSSTPFITSGVTIICAAIYXVCLLIGYDSYAEICFLPSAVAS 241 MRP + + R + + P T + + A+ L ++ +P + S Sbjct: 1 MRPRLQNFNALRAR--SYLTRLPLFTRLIVLAIIALSIASLQSVWNLREWGALIPEEI-S 57 Query: 242 HFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLLATTNAIFHLI 421 YR T L H +++H + N+L PL E G++ L L F T+ Sbjct: 58 ITNAYRLSTFPLIHLNVIHAILNLLALTPLMERFETEHGTLTSLALFFGPLTSIP----A 113 Query: 422 VAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIET 529 VA+++ ++ ++ V +G S +F+++ +E+ Sbjct: 114 VAYVLIERCIFRANHGV----LGASMWVFTLLAMES 145
>PDR13_ORYSA (Q8S628) Pleiotropic drug resistance protein 13| Length = 1441 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/151 (15%), Positives = 62/151 (41%), Gaps = 16/151 (10%) Frame = +2 Query: 137 TSGVTIICAAIYXVCLLIGYDSYAEI---------CFLPSAVASHFQVYRFYTSVLFHG- 286 T + ++ A+Y CL +G ++ + + + A+ + + + + ++HG Sbjct: 1211 TEDILLLMGALYAACLFLGVNNASSVQPVVSVERTVYYRERAANMYSSFPYAAAQVYHGL 1270 Query: 287 ------SLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNP 448 ++ ++F ++T+ + E I V L MFL T + ++ V P Sbjct: 1271 VEIPYIAVQTLIFGLITYFMVNYE-RNIRKLVLYLIYMFLTFTYFTFYGMVA---VGLTP 1326 Query: 449 LYHVSYLVDECSIGFSGVIFSMIVIETSLSG 541 H++ +V ++ ++ ++ + G Sbjct: 1327 TQHMASVVSSAFYSLWNLLSGFLIPQSRIPG 1357
>MSC2_YEAST (Q03455) Probable zinc transporter MSC2 (Meiotic sister chromatid| recombination protein 2) Length = 724 Score = 30.8 bits (68), Expect = 2.6 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = +2 Query: 197 DSYAEICFLPSAVASHFQVYRFYTSVLFHGS--LLHVLFNMLTFVPLGTELERIMGSVRL 370 D + FLP+ VAS F ++ Y + + + S +VLF + F+ + T + + S + Sbjct: 56 DHAIRLIFLPTFVASSFNLFAHYFNFINYSSRRKYYVLFTAIYFLSILTAIFHPIQSTCI 115 Query: 371 LFLMFLLATT 400 L+ L TT Sbjct: 116 TLLIIKLLTT 125
>CYB_CHOCR (P48875) Cytochrome b| Length = 381 Score = 30.8 bits (68), Expect = 2.6 Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 5/111 (4%) Frame = +2 Query: 224 PSAVASHFQV-YRFYTSVLFHGSLLHVLFNMLTFVP----LGTELERIMGSVRLLFLMFL 388 P+ + H+ + F +S+ +L +F + + P +E IM V +L+ Sbjct: 20 PTPINIHYAWNFGFLSSICLIVQILTGIFLAMHYTPHVDLAFASVEHIMRDVNYGWLLRY 79 Query: 389 LATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSG 541 + T A IV ++ + LY SY+ + GV+ +++I T+ G Sbjct: 80 IHTNGASMFFIVVYIHIFRGLYFGSYIKPRHWVWVIGVLILLLMILTAFIG 130
>RBD2_ASHGO (Q755H8) Rhomboid protein 2 (EC 3.4.21.-)| Length = 261 Score = 30.4 bits (67), Expect = 3.4 Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Frame = +2 Query: 134 ITSGVTIICAAIYXVCLLIGYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNM 313 +T+G+++ +Y + + + +I P A+ Q+ R L H S+ H+L N+ Sbjct: 17 LTAGLSVFLTLVYVLNWVFPINE--KILLDPGALRK-LQLTRLSLYPLAHLSIFHLLLNL 73 Query: 314 LT-FVPLGTELERIMGSVRLLFLMFLLATTNAIFHLIVAFLV 436 ++ FVPL + E G+V + LLA + + +V L+ Sbjct: 74 MSLFVPL-SMFEASHGTVFTGITLNLLAIVTGVVYCLVGMLL 114
>RHOM_DROME (P20350) Protein rhomboid (EC 3.4.21.105) (Protein veinlet)| Length = 355 Score = 30.4 bits (67), Expect = 3.4 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +2 Query: 248 QVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRL 370 QV+RF++ + H + H+ FN++ + G LE + G+ R+ Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARI 189
>CYB_MAIZE (P04165) Cytochrome b| Length = 388 Score = 30.4 bits (67), Expect = 3.4 Identities = 20/67 (29%), Positives = 31/67 (46%) Frame = +2 Query: 341 LERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIV 520 +E IM V +L+ + A LIV L + LYH SY + GV+ +++ Sbjct: 71 VEHIMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPREFVWCLGVVIFLLM 130 Query: 521 IETSLSG 541 I T+ G Sbjct: 131 IVTAFIG 137
>VCL_THECC (Q43358) Vicilin precursor| Length = 525 Score = 30.4 bits (67), Expect = 3.4 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = -1 Query: 418 EMENCISRCKKEHQEQETD*SHNSLQLSPQGYKGQHVE*HMKQRAMK--QNRCVESVHLK 245 E E C RC++E++EQ+ LQ Q +G+ E QR + Q +C E + Sbjct: 58 EQEQCEQRCEREYKEQQRQ-QEEELQRQYQQCQGRCQEQQQGQREQQQCQRKCWEQYKEQ 116 Query: 244 MRG 236 RG Sbjct: 117 ERG 119
>PSARL_MOUSE (Q5XJY4) Presenilins-associated rhomboid-like protein,| mitochondrial precursor (EC 3.4.21.105) (Mitochondrial intramembrane-cleaving protease PARL) [Contains: P-beta (Pbeta)] Length = 377 Score = 30.0 bits (66), Expect = 4.4 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 4/149 (2%) Frame = +2 Query: 83 EAGISTRLNQWWSSTPFITSGVTIICAAIYXVCLLIGYDSYAE--ICFLPSAVASHFQVY 256 E + +N+WW+S VT I AA V L S I + S AS Sbjct: 146 EGNLRKEINKWWNSLSDGQRTVTGIIAANALVFCLWRVPSLQRTMIRYFTSNPASKVLCS 205 Query: 257 RFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLLA--TTNAIFHLIVAF 430 S H SL H+ NM + + I+G + + ++L A +N + ++ Sbjct: 206 PMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFV-AVYLSAGVISNFVSYVCKVA 264 Query: 431 LVDYNPLYHVSYLVDECSIGFSGVIFSMI 517 Y P S+G SG I +++ Sbjct: 265 TGRYGP-----------SLGASGAIMTVL 282
>CYB_OENBE (P09843) Cytochrome b| Length = 394 Score = 30.0 bits (66), Expect = 4.4 Identities = 28/117 (23%), Positives = 45/117 (38%) Frame = +2 Query: 191 GYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRL 370 G+ S A IC + V F + V + FN +E IM V Sbjct: 38 GFGSLAGICLVIQIVTGVFLAMHYTPHV-------DLAFN---------SVEHIMRDVEG 81 Query: 371 LFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSG 541 +L+ + A IV +L + LY+ SY + GV+ +++I T+ G Sbjct: 82 GWLLRYMHANGASMFFIVVYLHTFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIG 138
>CYB_SACDO (Q35819) Cytochrome b| Length = 385 Score = 29.6 bits (65), Expect = 5.8 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +2 Query: 335 TELERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSM 514 + +E IM V +++ L A F +V F+ LY+ SY ++ GVI + Sbjct: 63 SSVEHIMRDVHSGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFI 122 Query: 515 IVIETSLSG 541 + I T+ G Sbjct: 123 LTIATAFLG 131
>PRDM4_HUMAN (Q9UKN5) PR domain zinc finger protein 4 (PR domain-containing| protein 4) Length = 801 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Frame = -1 Query: 409 NCISRCKKEHQEQETD*SHNSLQLSPQGYKGQHVE*HMKQRAMKQNRCVES------VHL 248 NC C + + SH L QG+ G H H K+R K + C ++ +H+ Sbjct: 548 NCGKECNSYTEFKAHLTSHIHNHLPTQGHSGSHGPSHSKERKWKCSMCPQAFISPSKLHV 607 Query: 247 KMRGH 233 GH Sbjct: 608 HFMGH 612
>NTNG1_HUMAN (Q9Y2I2) Netrin G1 precursor (Laminet-1)| Length = 539 Score = 29.3 bits (64), Expect = 7.6 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = +3 Query: 168 YXWCAC*LDMTPMPRYASCLLQWPRIFKCTDSTHLFCFMALCFMCYSTC 314 + + AC + T M +Y L P I C D FC M +MC + C Sbjct: 45 WDYMACQPESTDMTKYLKVKLDPPDI-TCGDPPETFCAMGNPYMCNNEC 92
>CYB_WHEAT (P07747) Cytochrome b| Length = 398 Score = 29.3 bits (64), Expect = 7.6 Identities = 28/117 (23%), Positives = 45/117 (38%) Frame = +2 Query: 191 GYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRL 370 G+ S A IC + V F + V + FN +E IM V Sbjct: 37 GFGSLAGICLVIQIVTGVFLAMHYTPHV-------DLAFN---------SVEHIMRDVEG 80 Query: 371 LFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSG 541 +L+ + A IV +L + LY+ SY + GV+ +++I T+ G Sbjct: 81 GWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIG 137
>CYB_SOLTU (P29757) Cytochrome b| Length = 392 Score = 29.3 bits (64), Expect = 7.6 Identities = 28/117 (23%), Positives = 45/117 (38%) Frame = +2 Query: 191 GYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRL 370 G+ S A IC + V F + V + FN +E IM V Sbjct: 36 GFGSLAGICLVIQIVTGVFLAMHYTPHV-------DLAFN---------SVEHIMRDVEG 79 Query: 371 LFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSG 541 +L+ + A IV +L + LY+ SY + GV+ +++I T+ G Sbjct: 80 GWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIG 136
>CYB_YEAST (P00163) Cytochrome b| Length = 385 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +2 Query: 335 TELERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSM 514 + +E IM V +++ L A F +V F+ LY+ SY ++ GVI + Sbjct: 63 SSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFI 122 Query: 515 IVIETSLSG 541 + I T+ G Sbjct: 123 LTIATAFLG 131
>CYB_RHORU (P23134) Cytochrome b| Length = 405 Score = 29.3 bits (64), Expect = 7.6 Identities = 17/67 (25%), Positives = 33/67 (49%) Frame = +2 Query: 341 LERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIV 520 +ERIM V +LM + A IV ++ + LY+ SY + + G++ +++ Sbjct: 77 VERIMRDVNYGWLMRYMHANGASMFFIVVYVHMFRGLYYGSYKPPREVLWWLGLVILLLM 136 Query: 521 IETSLSG 541 + T+ G Sbjct: 137 MATAFMG 143
>3BHS7_MOUSE (Q9EQC1) 3 beta-hydroxysteroid dehydrogenase type 7 (3| beta-hydroxysteroid dehydrogenase type VII) (3Beta-HSD VII) (3-beta-hydroxy-delta(5)-C27 steroid oxidoreductase) (EC 1.1.1.-) (C(27) 3beta-HSD) Length = 369 Score = 29.3 bits (64), Expect = 7.6 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = +2 Query: 305 FNMLTFVPLGTELERIMGSVRLL--FLMFLLATTNAIFHLIVAFLVDYNPL 451 FNM P G R++G+ LL +L+ LLAT NA+ ++ LV Y PL Sbjct: 271 FNMEFLSPCGL---RLIGAHPLLPYWLLVLLATLNALLQWLLRPLVLYTPL 318
>CYB_ORYSA (P14833) Cytochrome b| Length = 397 Score = 29.3 bits (64), Expect = 7.6 Identities = 28/117 (23%), Positives = 45/117 (38%) Frame = +2 Query: 191 GYDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRL 370 G+ S A IC + V F + V + FN +E IM V Sbjct: 37 GFGSLAGICLVIQIVTGVFLAMHYTPHV-------DLAFN---------SVEHIMRDVEG 80 Query: 371 LFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSG 541 +L+ + A IV +L + LY+ SY + GV+ +++I T+ G Sbjct: 81 GWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIG 137
>MBI2_YEAST (P03873) Cytochrome b mRNA maturase bI2| Length = 423 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +2 Query: 335 TELERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSM 514 + +E IM V +++ L A F +V F+ LY+ SY ++ GVI + Sbjct: 63 SSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFI 122 Query: 515 IVIETSLSG 541 + I T+ G Sbjct: 123 LTIATAFLG 131
>MBI3_YEAST (Q9ZZW7) Cytochrome b mRNA maturase bI3| Length = 517 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +2 Query: 335 TELERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSM 514 + +E IM V +++ L A F +V F+ LY+ SY ++ GVI + Sbjct: 63 SSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFI 122 Query: 515 IVIETSLSG 541 + I T+ G Sbjct: 123 LTIATAFLG 131
>MBI4_YEAST (P03879) Intron-encoded RNA maturase bI4 precursor (RNA maturase| SCbI4) [Contains: Truncated, nonfunctional cytochrome b; RNA maturase bI4 (EC 3.1.-.-)] Length = 638 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +2 Query: 335 TELERIMGSVRLLFLMFLLATTNAIFHLIVAFLVDYNPLYHVSYLVDECSIGFSGVIFSM 514 + +E IM V +++ L A F +V F+ LY+ SY ++ GVI + Sbjct: 63 SSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFI 122 Query: 515 IVIETSLSG 541 + I T+ G Sbjct: 123 LTIATAFLG 131
>ROM2_CAEEL (P34356) Rhomboid-related protein 2 (EC 3.4.21.105)| Length = 435 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/57 (26%), Positives = 31/57 (54%) Frame = +2 Query: 248 QVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLLATTNAIFHL 418 +++R +T L + + H++FN+L + +G LE ++ R+ L F+ +I L Sbjct: 168 ELWRLFTYCLINVGIFHIIFNILIQLAIGVPLE-LVHRWRIYILYFMGVLFGSILSL 223
>MNN10_YEAST (P50108) Probable alpha-1,6-mannosyltransferase MNN10 (EC 2.4.1.-)| (Mannan polymerase II complex MNN10 subunit) (M-Pol II subunit MNN10) (Bud emergence delay protein 1) Length = 393 Score = 28.9 bits (63), Expect = 9.9 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 384 SFLQRLMQFSISSLPSWWITILYTMSHILW 473 SFL + ++S L WW +LY H++W Sbjct: 270 SFLIKNSEWSKLLLDMWWDPVLYEQKHMVW 299
>YCF4_PORPU (P51220) Photosystem I assembly protein ycf4| Length = 186 Score = 28.9 bits (63), Expect = 9.9 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +2 Query: 107 NQWWSSTPFITS-GVTIICAAIYXVCLLIGYDSYAEICFLPSAVASHFQVYRFYTSV 274 N WW+ST FI + G + + Y L+ + + E+ F+P + V FY SV Sbjct: 23 NYWWASTIFIGALGFLLAGLSSYFQTDLLPFANSTELVFIPQGI-----VMTFYGSV 74
>NTNG1_MOUSE (Q8R4G0) Netrin G1 precursor (Laminet-1)| Length = 539 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = +3 Query: 168 YXWCAC*LDMTPMPRYASCLLQWPRIFKCTDSTHLFCFMALCFMCYSTC 314 + + AC + T M +Y L P I C D FC M +MC + C Sbjct: 45 WDYTACQPESTDMTKYLKVKLDPPDI-TCGDPPESFCAMGNPYMCNNEC 92
>RBD2_NEUCR (Q7S4V5) Rhomboid protein 2 (EC 3.4.21.-)| Length = 276 Score = 28.9 bits (63), Expect = 9.9 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +2 Query: 251 VYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMF 385 +YR T H ++ H + N++ F PL E G++ + L F Sbjct: 71 LYRINTFPFIHLNIFHTILNIVAFTPLLERFEHEHGTLTSVALFF 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,717,922 Number of Sequences: 219361 Number of extensions: 1514817 Number of successful extensions: 3888 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3788 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3886 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
