ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative... 321 2e-84
2gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno... 224 3e-55
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 224 3e-55
5gb|AY110159.1| Zea mays CL31053_1 mRNA sequence 206 7e-50
6gb|AY104869.1| Zea mays PCO090462 mRNA sequence 76 2e-10
7gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complet... 44 0.56
8gb|AY847290.1| Schistosoma japonicum inhibitor of apoptosis prot... 42 2.2
9gb|AY815175.1| Schistosoma japonicum SJCHGC09493 protein mRNA, c... 42 2.2
10ref|XM_535982.2| PREDICTED: Canis familiaris cardiac titin (TTN)... 42 2.2
11gb|AF508982.1| Homo sapiens Na+/Ca2+ exchanger isoform 3 (SLC8A3... 42 2.2
12emb|CR956416.5| Pig DNA sequence from clone PigI-464E6 on chromo... 42 2.2
13emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in l... 42 2.2
14gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete s... 42 2.2
15emb|BX324156.6| Zebrafish DNA sequence from clone CH211-215C3 in... 42 2.2
16emb|AL135747.4|CNS01DVE Human chromosome 14 DNA sequence BAC R-1... 42 2.2
17emb|AL160191.3|CNS01RGT Human chromosome 14 DNA sequence BAC R-4... 42 2.2
18gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromos... 42 2.2
19gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 8.8
20gb|AC008810.8| Homo sapiens chromosome 5 clone CTD-2096I23, comp... 40 8.8
21emb|CR380955.1| Candida glabrata strain CBS138 chromosome I comp... 40 8.8
22emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 40 8.8
23emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14,... 40 8.8
24gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.8
25gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 8.8
26gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 8.8
27dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 8.8
28emb|AL805950.11| Mouse DNA sequence from clone RP23-134I15 on ch... 40 8.8
29gb|M34390.1|PFAATUBII P.falciparum alpha-tubulin II gene, comple... 40 8.8 
>ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner
            envelope protein (OSJNBa0051D19.7), mRNA
          Length = 2967

 Score =  321 bits (162), Expect = 2e-84
 Identities = 297/342 (86%)
 Strand = Plus / Plus

                                                                        
Query: 17   cacaggtgaatttgatgaagaggaagtgtatgtaaagatgccagctgatctcatcataag 76
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | 
Sbjct: 2550 cacaggtgaatttgatgaagaggaagtgtatgtaaagatcccagctgatctcatcattaa 2609

                                                                        
Query: 77   tgctgagaaggccaggtcgattgttcaggacattgcgaaggttaggttggagaatgccct 136
            |||||||||||||| ||||||||| ||||||||||||||| |||||||||| || |||||
Sbjct: 2610 tgctgagaaggccaagtcgattgtccaggacattgcgaagattaggttggataacgccct 2669

                                                                        
Query: 137  tgttcaggctgttgctttgcttcggcagaagaagagagatggcgtgatctcatcactgaa 196
            ||| || ||||||||| |||||||||||||||||| |||||  ||| || ||||  ||||
Sbjct: 2670 tgtccaagctgttgctctgcttcggcagaagaagaaagatgaagtggtcgcatccttgaa 2729

                                                                        
Query: 197  cgacctgctcgcatgtgacgcggcggtgcctgcttcgaagcccttgtcatggcccactcc 256
            |||| |||| ||||| |||||||| |||||||||||||||||| | |||||||| ||  |
Sbjct: 2730 cgacttgcttgcatgcgacgcggctgtgcctgcttcgaagcccctatcatggcctacatc 2789

                                                                        
Query: 257  gcgagagcttgacgacctgtactgcgtgtacatgaagagcattccgaagcaggacaagct 316
              ||||||| || || |||||| || | ||||||||||||||||||||||  || |||||
Sbjct: 2790 aggagagctggatgatctgtacggcatttacatgaagagcattccgaagcctgaaaagct 2849

                                                      
Query: 317  gtcgaggttgcagtatttactcgacatcagcgccgagaaggc 358
            ||| |||||||||||| | || | ||| |||| |||||||||
Sbjct: 2850 gtcaaggttgcagtatctgcttggcataagcgacgagaaggc 2891
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>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score =  224 bits (113), Expect = 3e-55
 Identities = 149/161 (92%)
 Strand = Plus / Plus

                                                                         
Query: 17    cacaggtgaatttgatgaagaggaagtgtatgtaaagatgccagctgatctcatcataag 76
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | 
Sbjct: 57631 cacaggtgaatttgatgaagaggaagtgtatgtaaagatcccagctgatctcatcattaa 57690

                                                                         
Query: 77    tgctgagaaggccaggtcgattgttcaggacattgcgaaggttaggttggagaatgccct 136
             |||||||||||||| ||||||||| ||||||||||||||| |||||||||| || |||||
Sbjct: 57691 tgctgagaaggccaagtcgattgtccaggacattgcgaagattaggttggataacgccct 57750

                                                      
Query: 137   tgttcaggctgttgctttgcttcggcagaagaagagagatg 177
             ||| || ||||||||| |||||||||||||||||| |||||
Sbjct: 57751 tgtccaagctgttgctctgcttcggcagaagaagaaagatg 57791



 Score =  115 bits (58), Expect = 2e-22
 Identities = 139/166 (83%)
 Strand = Plus / Plus

                                                                         
Query: 193   tgaacgacctgctcgcatgtgacgcggcggtgcctgcttcgaagcccttgtcatggccca 252
             |||||||| |||| ||||| |||||||| |||||||||||||||||| | |||||||| |
Sbjct: 58090 tgaacgacttgcttgcatgcgacgcggctgtgcctgcttcgaagcccctatcatggccta 58149

                                                                         
Query: 253   ctccgcgagagcttgacgacctgtactgcgtgtacatgaagagcattccgaagcaggaca 312
             |  |  ||||||| || || |||||| || | ||||||||||||||||||||||  || |
Sbjct: 58150 catcaggagagctggatgatctgtacggcatttacatgaagagcattccgaagcctgaaa 58209

                                                           
Query: 313   agctgtcgaggttgcagtatttactcgacatcagcgccgagaaggc 358
             ||||||| |||||||||||| | || | ||| |||| |||||||||
Sbjct: 58210 agctgtcaaggttgcagtatctgcttggcataagcgacgagaaggc 58255



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 461   ttttttgttaggtagccagcagagtcgagctcctgccagacgcggtgctgtggcgccaa 519
             ||||||||||||||||||||||||| |||  ||| ||| ||  ||||||||||||||||
Sbjct: 58352 ttttttgttaggtagccagcagagttgaggacctaccatacttggtgctgtggcgccaa 58410
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  224 bits (113), Expect = 3e-55
 Identities = 149/161 (92%)
 Strand = Plus / Minus

                                                                            
Query: 17       cacaggtgaatttgatgaagaggaagtgtatgtaaagatgccagctgatctcatcataag 76
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | 
Sbjct: 18155497 cacaggtgaatttgatgaagaggaagtgtatgtaaagatcccagctgatctcatcattaa 18155438

                                                                            
Query: 77       tgctgagaaggccaggtcgattgttcaggacattgcgaaggttaggttggagaatgccct 136
                |||||||||||||| ||||||||| ||||||||||||||| |||||||||| || |||||
Sbjct: 18155437 tgctgagaaggccaagtcgattgtccaggacattgcgaagattaggttggataacgccct 18155378

                                                         
Query: 137      tgttcaggctgttgctttgcttcggcagaagaagagagatg 177
                ||| || ||||||||| |||||||||||||||||| |||||
Sbjct: 18155377 tgtccaagctgttgctctgcttcggcagaagaagaaagatg 18155337



 Score =  115 bits (58), Expect = 2e-22
 Identities = 139/166 (83%)
 Strand = Plus / Minus

                                                                            
Query: 193      tgaacgacctgctcgcatgtgacgcggcggtgcctgcttcgaagcccttgtcatggccca 252
                |||||||| |||| ||||| |||||||| |||||||||||||||||| | |||||||| |
Sbjct: 18155038 tgaacgacttgcttgcatgcgacgcggctgtgcctgcttcgaagcccctatcatggccta 18154979

                                                                            
Query: 253      ctccgcgagagcttgacgacctgtactgcgtgtacatgaagagcattccgaagcaggaca 312
                |  |  ||||||| || || |||||| || | ||||||||||||||||||||||  || |
Sbjct: 18154978 catcaggagagctggatgatctgtacggcatttacatgaagagcattccgaagcctgaaa 18154919

                                                              
Query: 313      agctgtcgaggttgcagtatttactcgacatcagcgccgagaaggc 358
                ||||||| |||||||||||| | || | ||| |||| |||||||||
Sbjct: 18154918 agctgtcaaggttgcagtatctgcttggcataagcgacgagaaggc 18154873



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 461      ttttttgttaggtagccagcagagtcgagctcctgccagacgcggtgctgtggcgccaa 519
                ||||||||||||||||||||||||| |||  ||| ||| ||  ||||||||||||||||
Sbjct: 18154776 ttttttgttaggtagccagcagagttgaggacctaccatacttggtgctgtggcgccaa 18154718
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  224 bits (113), Expect = 3e-55
 Identities = 149/161 (92%)
 Strand = Plus / Minus

                                                                            
Query: 17       cacaggtgaatttgatgaagaggaagtgtatgtaaagatgccagctgatctcatcataag 76
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | 
Sbjct: 18164750 cacaggtgaatttgatgaagaggaagtgtatgtaaagatcccagctgatctcatcattaa 18164691

                                                                            
Query: 77       tgctgagaaggccaggtcgattgttcaggacattgcgaaggttaggttggagaatgccct 136
                |||||||||||||| ||||||||| ||||||||||||||| |||||||||| || |||||
Sbjct: 18164690 tgctgagaaggccaagtcgattgtccaggacattgcgaagattaggttggataacgccct 18164631

                                                         
Query: 137      tgttcaggctgttgctttgcttcggcagaagaagagagatg 177
                ||| || ||||||||| |||||||||||||||||| |||||
Sbjct: 18164630 tgtccaagctgttgctctgcttcggcagaagaagaaagatg 18164590



 Score =  115 bits (58), Expect = 2e-22
 Identities = 139/166 (83%)
 Strand = Plus / Minus

                                                                            
Query: 193      tgaacgacctgctcgcatgtgacgcggcggtgcctgcttcgaagcccttgtcatggccca 252
                |||||||| |||| ||||| |||||||| |||||||||||||||||| | |||||||| |
Sbjct: 18164291 tgaacgacttgcttgcatgcgacgcggctgtgcctgcttcgaagcccctatcatggccta 18164232

                                                                            
Query: 253      ctccgcgagagcttgacgacctgtactgcgtgtacatgaagagcattccgaagcaggaca 312
                |  |  ||||||| || || |||||| || | ||||||||||||||||||||||  || |
Sbjct: 18164231 catcaggagagctggatgatctgtacggcatttacatgaagagcattccgaagcctgaaa 18164172

                                                              
Query: 313      agctgtcgaggttgcagtatttactcgacatcagcgccgagaaggc 358
                ||||||| |||||||||||| | || | ||| |||| |||||||||
Sbjct: 18164171 agctgtcaaggttgcagtatctgcttggcataagcgacgagaaggc 18164126



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 461      ttttttgttaggtagccagcagagtcgagctcctgccagacgcggtgctgtggcgccaa 519
                ||||||||||||||||||||||||| |||  ||| ||| ||  ||||||||||||||||
Sbjct: 18164029 ttttttgttaggtagccagcagagttgaggacctaccatacttggtgctgtggcgccaa 18163971
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>gb|AY110159.1| Zea mays CL31053_1 mRNA sequence
          Length = 1344

 Score =  206 bits (104), Expect = 7e-50
 Identities = 194/224 (86%)
 Strand = Plus / Minus

                                                                       
Query: 30  gatgaagaggaagtgtatgtaaagatgccagctgatctcatcataagtgctgagaaggcc 89
           |||||||||||| ||||||| ||||| |||||||||||||| |||||| |||||||||||
Sbjct: 732 gatgaagaggaaatgtatgtgaagattccagctgatctcataataagttctgagaaggcc 673

                                                                       
Query: 90  aggtcgattgttcaggacattgcgaaggttaggttggagaatgcccttgttcaggctgtt 149
           | ||| ||||| ||||| ||||| |||||||||||||||||  ||||||| |||||| ||
Sbjct: 672 aagtcaattgtacaggatattgcaaaggttaggttggagaactcccttgtccaggctatt 613

                                                                       
Query: 150 gctttgcttcggcagaagaagagagatggcgtgatctcatcactgaacgacctgctcgca 209
           || |||||||||||||||||||||||||  ||| | ||||| ||||| ||| ||||||||
Sbjct: 612 gcgttgcttcggcagaagaagagagatgatgtgctttcatctctgaatgacatgctcgca 553

                                                       
Query: 210 tgtgacgcggcggtgcctgcttcgaagcccttgtcatggcccac 253
           ||||| || ||||| ||||| ||    |||||||||||||||||
Sbjct: 552 tgtgatgctgcggtccctgcatcacgacccttgtcatggcccac 509
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>gb|AY104869.1| Zea mays PCO090462 mRNA sequence
          Length = 805

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                       
Query: 64  atctcatcataagtgctgagaaggccaggtcgattgttcaggacattgcgaaggttaggt 123
           ||||||| |||||| |||||||||||| ||| ||||||||| | ||| | || || ||||
Sbjct: 424 atctcattataagttctgagaaggccaagtcaattgttcagtatattacaaaagtcaggt 483

                                                             
Query: 124 tggagaatgcccttgttcaggctgttgctttgcttcggcagaagaagaga 173
           |||||||  |||||||||||||| |||  || |||| ||||||| |||||
Sbjct: 484 tggagaactcccttgttcaggcttttgtctttcttctgcagaaggagaga 533
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>gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complete sequence
          Length = 158901

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 116    ggttaggttggagaatgcccttgttc 141
              ||||| ||||||||||||||||||||
Sbjct: 121075 ggttatgttggagaatgcccttgttc 121050
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>gb|AY847290.1| Schistosoma japonicum inhibitor of apoptosis protein (Sj314C10) mRNA,
            complete cds
          Length = 1631

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   tttgatgaagaggaagtgtat 47
            |||||||||||||||||||||
Sbjct: 1076 tttgatgaagaggaagtgtat 1096
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>gb|AY815175.1| Schistosoma japonicum SJCHGC09493 protein mRNA, complete cds
          Length = 1595

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   tttgatgaagaggaagtgtat 47
            |||||||||||||||||||||
Sbjct: 1064 tttgatgaagaggaagtgtat 1084
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>ref|XM_535982.2| PREDICTED: Canis familiaris cardiac titin (TTN), mRNA
          Length = 36258

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 595   caccacaaggtgacagttttctgctgcattctttcaa 631
             ||||| |||||||||||||||| || |||| ||||||
Sbjct: 28949 caccagaaggtgacagttttcttctccattgtttcaa 28913
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>gb|AF508982.1| Homo sapiens Na+/Ca2+ exchanger isoform 3 (SLC8A3) gene, promoter region
              and complete cds
          Length = 145118

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 605    tgacagttttctgctgcattc 625
              |||||||||||||||||||||
Sbjct: 129053 tgacagttttctgctgcattc 129073
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>emb|CR956416.5| Pig DNA sequence from clone PigI-464E6 on chromosome 7, complete
             sequence
          Length = 141597

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 446   atgggaagagaacactttttt 466
             |||||||||||||||||||||
Sbjct: 26849 atgggaagagaacactttttt 26869
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>emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in linkage group 5,
             complete sequence
          Length = 184144

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    aggtgaatttgatgaagagga 40
             |||||||||||||||||||||
Sbjct: 88327 aggtgaatttgatgaagagga 88347
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>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence
          Length = 125707

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 542   gcatggttttgcatgatcctgacat 566
             ||||||||||| |||||||||||||
Sbjct: 48816 gcatggttttgaatgatcctgacat 48840
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>emb|BX324156.6| Zebrafish DNA sequence from clone CH211-215C3 in linkage group 1,
              complete sequence
          Length = 214471

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 610    gttttctgctgcattctttca 630
              |||||||||||||||||||||
Sbjct: 196861 gttttctgctgcattctttca 196841
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>emb|AL135747.4|CNS01DVE Human chromosome 14 DNA sequence BAC R-1023I22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173275

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 605   tgacagttttctgctgcattc 625
             |||||||||||||||||||||
Sbjct: 17509 tgacagttttctgctgcattc 17529
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>emb|AL160191.3|CNS01RGT Human chromosome 14 DNA sequence BAC R-486O13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206256

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 605    tgacagttttctgctgcattc 625
              |||||||||||||||||||||
Sbjct: 203529 tgacagttttctgctgcattc 203549
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>gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromosome ul, complete
              sequence
          Length = 218983

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 520    tagctgctgttttgtagctag 540
              |||||||||||||||||||||
Sbjct: 214878 tagctgctgttttgtagctag 214858
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 299     tccgaagcaggacaagctgt 318
               ||||||||||||||||||||
Sbjct: 2936289 tccgaagcaggacaagctgt 2936270
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>gb|AC008810.8| Homo sapiens chromosome 5 clone CTD-2096I23, complete sequence
          Length = 157325

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 601   aaggtgacagttttctgctgcatt 624
             ||||||| ||||||||||||||||
Sbjct: 79500 aaggtgatagttttctgctgcatt 79523
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>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence
          Length = 1089401

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     caggtgaatttgatgaagaggaag 42
              ||||||||||||||||| ||||||
Sbjct: 740076 caggtgaatttgatgaaaaggaag 740099
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>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4
          Length = 272698

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    atcataagtgctgagaaggc 88
             ||||||||||||||||||||
Sbjct: 96662 atcataagtgctgagaaggc 96681
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>emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14, complete sequence
          Length = 127482

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gaatgcccttgttcaggctg 147
             ||||||||||||||||||||
Sbjct: 94122 gaatgcccttgttcaggctg 94103
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 299     tccgaagcaggacaagctgt 318
               ||||||||||||||||||||
Sbjct: 3249239 tccgaagcaggacaagctgt 3249258
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    atgtgacgcggcggtgcctg 228
              ||||||||||||||||||||
Sbjct: 634292 atgtgacgcggcggtgcctg 634311
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 23      tgaatttgatgaagaggaag 42
               ||||||||||||||||||||
Sbjct: 1291319 tgaatttgatgaagaggaag 1291300
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>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139,
             complete sequence
          Length = 106089

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gaagaagagagatggcgtga 183
             ||||||||||||||||||||
Sbjct: 18905 gaagaagagagatggcgtga 18924
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>emb|AL805950.11| Mouse DNA sequence from clone RP23-134I15 on chromosome 2, complete
             sequence
          Length = 237337

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ggcagaagaagagagatggc 179
             ||||||||||||||||||||
Sbjct: 85565 ggcagaagaagagagatggc 85584
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>gb|M34390.1|PFAATUBII P.falciparum alpha-tubulin II gene, complete cds
          Length = 3706

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   atcataagtgctgagaaggc 88
            ||||||||||||||||||||
Sbjct: 1901 atcataagtgctgagaaggc 1920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,227,310
Number of Sequences: 3902068
Number of extensions: 6227310
Number of successful extensions: 119574
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119311
Number of HSP's gapped (non-prelim): 258
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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