| Clone Name | bags7a20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063H10, full insert sequence Length = 1236 Score = 555 bits (280), Expect = e-155 Identities = 495/568 (87%), Gaps = 9/568 (1%) Strand = Plus / Plus Query: 60 agaactctctgagagtgaaatcagtgcttcatctgctttggttggactattagatggttt 119 |||||| | |||||||||| ||||||| || |||||||||||||||||||| |||||||| Sbjct: 398 agaactttgtgagagtgaagtcagtgcatcgtctgctttggttggactattggatggttt 457 Query: 120 gttgcaatctggagtttcagctgcaccaagaaaaaagatagaaatcagtgaacagaaaaa 179 ||||||||||||| ||||||||||| | |||||||||||||| | |||| |||||||| Sbjct: 458 gttgcaatctggaacttcagctgcacaacgaaaaaagatagaagttggtgagcagaaaaa 517 Query: 180 gaagaggatgaagtccgatacggatacaacaagattttcttctgcatctatgaggagcca 239 ||||||||||||||| ||||| ||||| ||| |||| || |||||||||||||||||||| Sbjct: 518 gaagaggatgaagtctgatacagatactacacgattctcctctgcatctatgaggagcca 577 Query: 240 acttgaccaagctgcaaaccttaaaggagagcaggttgcagcgagggtaaagtcggatga 299 ||||||||||||| ||||||| |||||||| ||||||||||| | ||| || || || || Sbjct: 578 acttgaccaagctacaaacctgaaaggagaacaggttgcagctaaggtcaaatcagacga 637 Query: 300 tgaaaaagacgagtggtttgtggtgaaggtcatacatttcgataaggaaacaaaagaatt 359 |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 638 agaaaaagatgaatggtttgtggtgaaggtgatacatttcgataaggaaacaaaagaata 697 Query: 360 tgaagtactggatgaggagcctggtgatgatgaagagagcgcccaaaagtttgagaggaa 419 ||| ||||| ||||||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 698 tgaggtacttgatgaggagccaggtgacgatgaagagagtgcccaaaa---------gaa 748 Query: 420 gtacaagttacctatgtcatatattattccatttccaaagaaaggagatccgtctagtgc 479 ||||||||| ||||||||| ||||||||||||||||||||| ||| ||||| || ||||| Sbjct: 749 gtacaagttgcctatgtcagatattattccatttccaaagagaggggatccttccagtgc 808 Query: 480 tcaggattttggacagggtcggcaagtcttagctgtttatcctggcacaacagcactata 539 | |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 809 cccagattttgggcagggtcgacaagtcttagctgtttatcctagcacaacagcactata 868 Query: 540 tagggccaccgtagcctctcatcgtaagaggaaatctgatgattacaatctcttatttga 599 ||| || || || |||||| ||||||||||||||||||| ||||| ||||| ||||| Sbjct: 869 tagagctactgttgcctctaatcgtaagaggaaatctgacgattatctactcttgtttga 928 Query: 600 tgatgacgaagaggatgggaatctacca 627 ||||||||| |||||||| ||||||||| Sbjct: 929 tgatgacgaggaggatggaaatctacca 956
>gb|BT018456.1| Zea mays clone EL01N0409A08.d mRNA sequence Length = 1170 Score = 438 bits (221), Expect = e-119 Identities = 445/521 (85%), Gaps = 9/521 (1%) Strand = Plus / Plus Query: 64 ctctctgagagtgaaatcagtgcttcatctgctttggttggactattagatggtttgttg 123 |||||||||| |||||||||||| ||| ||||| | ||||| ||||||||||||||||| Sbjct: 305 ctctctgagaatgaaatcagtgcctcaaatgcttcgattggattattagatggtttgttg 364 Query: 124 caatctggagtttcagctgcaccaagaaaaaagatagaaatcagtgaacagaaaaagaag 183 |||||||||| |||| |||||| || |||||||||||| | |||| |||||||||||| Sbjct: 365 caatctggagcttcaactgcacaaaagaaaaagatagaagttggtgagcagaaaaagaag 424 Query: 184 aggatgaagtccgatacggatacaacaagattttcttctgcatctatgaggagccaactt 243 ||||| ||||| ||||| ||| | || |||||||| ||||||||||||||| |||||| Sbjct: 425 aggatcaagtctgatacagattctgcacgattttctgctgcatctatgaggaatcaactt 484 Query: 244 gaccaagctgcaaaccttaaaggagagcaggttgcagcgagggtaaagtcggatgatgaa 303 ||||||||||||| ||||||||||||||||||||| || |||||||| || ||||| ||| Sbjct: 485 gaccaagctgcaagccttaaaggagagcaggttgctgctagggtaaaatcagatgacgaa 544 Query: 304 aaagacgagtggtttgtggtgaaggtcatacatttcgataaggaaacaaaagaatttgaa 363 ||||||||||||||||| ||||||||| | ||||||||||||| |||||||| | |||| Sbjct: 545 aaagacgagtggtttgtcgtgaaggtcctttatttcgataaggagacaaaagagtatgaa 604 Query: 364 gtactggatgaggagcctggtgatgatgaagagagcgcccaaaagtttgagaggaagtac 423 ||||| || || || || |||||||| ||||||||| | ||||| ||||||| Sbjct: 605 gtacttgacgaagaaccaggtgatgacgaagagagcactcaaaa---------gaagtac 655 Query: 424 aagttacctatgtcatatattattccatttccaaagaaaggagatccgtctagtgctcag 483 ||||| |||||||| || |||||||||||||| |||||||| ||||| || ||||| | Sbjct: 656 aagttgcctatgtcttacattattccatttccgaagaaaggggatccttcgagtgcccca 715 Query: 484 gattttggacagggtcggcaagtcttagctgtttatcctggcacaacagcactatatagg 543 |||||||| |||||||| ||||| ||||||||||||||||||||||||||| |||| || Sbjct: 716 gattttgggcagggtcgacaagttttagctgtttatcctggcacaacagcattatacaga 775 Query: 544 gccaccgtagcctctcatcgtaagaggaaatctgatgatta 584 || ||||||| ||||||||||||||||| ||||||||||| Sbjct: 776 gctcccgtagcttctcatcgtaagaggaagtctgatgatta 816
>gb|AY106324.1| Zea mays PCO133117 mRNA sequence Length = 711 Score = 228 bits (115), Expect = 2e-56 Identities = 225/263 (85%), Gaps = 9/263 (3%) Strand = Plus / Plus Query: 322 gtgaaggtcatacatttcgataaggaaacaaaagaatttgaagtactggatgaggagcct 381 |||||||||||||||||||||||||| |||||||| | ||||||||| || || || || Sbjct: 21 gtgaaggtcatacatttcgataaggagacaaaagagtatgaagtacttgacgaagaacca 80 Query: 382 ggtgatgatgaagagagcgcccaaaagtttgagaggaagtacaagttacctatgtcatat 441 |||||||| ||||||||| | |||||| ||||||||||| |||||||| || Sbjct: 81 ggtgatgacgaagagagcactcaaaag---------aagtacaagttgcctatgtcttac 131 Query: 442 attattccatttccaaagaaaggagatccgtctagtgctcaggattttggacagggtcgg 501 |||||||||||||| |||||||| ||||| || ||||| | ||||||||| |||||||| Sbjct: 132 attattccatttccgaagaaaggggatccttcgagtgccccggattttgggcagggtcga 191 Query: 502 caagtcttagctgtttatcctggcacaacagcactatatagggccaccgtagcctctcat 561 ||||| ||||||||||||||||||||||||||| |||| || || |||||||| |||||| Sbjct: 192 caagttttagctgtttatcctggcacaacagcattatacagagctaccgtagcttctcat 251 Query: 562 cgtaagaggaaatctgatgatta 584 ||||||||||| ||||||||||| Sbjct: 252 cgtaagaggaagtctgatgatta 274
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Minus Query: 415 aggaagtacaagttacctatgtcatatattattccatttccaaagaaaggagatccgtct 474 |||||||||||||| ||||||||| ||||||||||||||||||||| ||| ||||| || Sbjct: 11221580 aggaagtacaagttgcctatgtcagatattattccatttccaaagagaggggatccttcc 11221521 Query: 475 agtgctcaggattttggacagggtcggcaagtcttagctgtttatcctggcacaacagca 534 ||||| | |||||||| |||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 11221520 agtgccccagattttgggcagggtcgacaagtcttagctgtttatcctagcacaacagca 11221461 Query: 535 ctatatagggccaccgtagcctctcatcgtaag 567 |||||||| || || || |||||| |||||||| Sbjct: 11221460 ctatatagagctactgttgcctctaatcgtaag 11221428 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 167 gtgaacagaaaaagaagaggatgaagtccgatacggatacaacaagattttcttctgcat 226 |||| ||||||||||||||||||||||| ||||| ||||| ||| |||| || ||||||| Sbjct: 11226167 gtgagcagaaaaagaagaggatgaagtctgatacagatactacacgattctcctctgcat 11226108 Query: 227 ctatgaggagccaacttgaccaagctgcaaaccttaaaggagagcaggtt 276 |||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 11226107 ctatgaggagccaacttgaccaagctacaaacctgaaaggagaacaggtt 11226058 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 81 cagtgcttcatctgctttggttggactattagatggtttgttgcaatctggagtttcagc 140 |||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 11226340 cagtgcatcgtctgctttggttggactattggatggtttgttgcaatctggaacttcagc 11226281 Query: 141 tgcaccaagaaaaaagatag 160 ||||| | |||||||||||| Sbjct: 11226280 tgcacaacgaaaaaagatag 11226261 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 271 caggttgcagcgagggtaaagtcggatgatgaaaaagacgagtggtttgtggtgaaggtc 330 ||||||||||| | ||| || || || || |||||||| || ||||||||||||||||| Sbjct: 11224828 caggttgcagctaaggtcaaatcagacgaagaaaaagatgaatggtttgtggtgaaggtg 11224769 Query: 331 atacatttcgataaggaaacaaaaga 356 |||||||||||||||||||||||||| Sbjct: 11224768 atacatttcgataaggaaacaaaaga 11224743 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 364 gtactggatgaggagcctggtgatgatgaagagagcgcccaaaagtttgaga 415 ||||| ||||||||||| ||||| ||||||||||| |||||||||| ||||| Sbjct: 11223710 gtacttgatgaggagccaggtgacgatgaagagagtgcccaaaagtatgaga 11223659 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 589 ctcttatttgatgatgacgaagaggatgggaatctacca 627 ||||| |||||||||||||| |||||||| ||||||||| Sbjct: 11218124 ctcttgtttgatgatgacgaggaggatggaaatctacca 11218086
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Minus Query: 415 aggaagtacaagttacctatgtcatatattattccatttccaaagaaaggagatccgtct 474 |||||||||||||| ||||||||| ||||||||||||||||||||| ||| ||||| || Sbjct: 11221251 aggaagtacaagttgcctatgtcagatattattccatttccaaagagaggggatccttcc 11221192 Query: 475 agtgctcaggattttggacagggtcggcaagtcttagctgtttatcctggcacaacagca 534 ||||| | |||||||| |||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 11221191 agtgccccagattttgggcagggtcgacaagtcttagctgtttatcctagcacaacagca 11221132 Query: 535 ctatatagggccaccgtagcctctcatcgtaag 567 |||||||| || || || |||||| |||||||| Sbjct: 11221131 ctatatagagctactgttgcctctaatcgtaag 11221099 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 167 gtgaacagaaaaagaagaggatgaagtccgatacggatacaacaagattttcttctgcat 226 |||| ||||||||||||||||||||||| ||||| ||||| ||| |||| || ||||||| Sbjct: 11225838 gtgagcagaaaaagaagaggatgaagtctgatacagatactacacgattctcctctgcat 11225779 Query: 227 ctatgaggagccaacttgaccaagctgcaaaccttaaaggagagcaggtt 276 |||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 11225778 ctatgaggagccaacttgaccaagctacaaacctgaaaggagaacaggtt 11225729 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 81 cagtgcttcatctgctttggttggactattagatggtttgttgcaatctggagtttcagc 140 |||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 11226011 cagtgcatcgtctgctttggttggactattggatggtttgttgcaatctggaacttcagc 11225952 Query: 141 tgcaccaagaaaaaagatag 160 ||||| | |||||||||||| Sbjct: 11225951 tgcacaacgaaaaaagatag 11225932 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 271 caggttgcagcgagggtaaagtcggatgatgaaaaagacgagtggtttgtggtgaaggtc 330 ||||||||||| | ||| || || || || |||||||| || ||||||||||||||||| Sbjct: 11224499 caggttgcagctaaggtcaaatcagacgaagaaaaagatgaatggtttgtggtgaaggtg 11224440 Query: 331 atacatttcgataaggaaacaaaaga 356 |||||||||||||||||||||||||| Sbjct: 11224439 atacatttcgataaggaaacaaaaga 11224414 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 364 gtactggatgaggagcctggtgatgatgaagagagcgcccaaaagtttgaga 415 ||||| ||||||||||| ||||| ||||||||||| |||||||||| ||||| Sbjct: 11223381 gtacttgatgaggagccaggtgacgatgaagagagtgcccaaaagtatgaga 11223330 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 589 ctcttatttgatgatgacgaagaggatgggaatctacca 627 ||||| |||||||||||||| |||||||| ||||||||| Sbjct: 11217795 ctcttgtttgatgatgacgaggaggatggaaatctacca 11217757
>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 108805 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 415 aggaagtacaagttacctatgtcatatattattccatttccaaagaaaggagatccgtct 474 |||||||||||||| ||||||||| ||||||||||||||||||||| ||| ||||| || Sbjct: 35078 aggaagtacaagttgcctatgtcagatattattccatttccaaagagaggggatccttcc 35137 Query: 475 agtgctcaggattttggacagggtcggcaagtcttagctgtttatcctggcacaacagca 534 ||||| | |||||||| |||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 35138 agtgccccagattttgggcagggtcgacaagtcttagctgtttatcctagcacaacagca 35197 Query: 535 ctatatagggccaccgtagcctctcatcgtaag 567 |||||||| || || || |||||| |||||||| Sbjct: 35198 ctatatagagctactgttgcctctaatcgtaag 35230 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 167 gtgaacagaaaaagaagaggatgaagtccgatacggatacaacaagattttcttctgcat 226 |||| ||||||||||||||||||||||| ||||| ||||| ||| |||| || ||||||| Sbjct: 30491 gtgagcagaaaaagaagaggatgaagtctgatacagatactacacgattctcctctgcat 30550 Query: 227 ctatgaggagccaacttgaccaagctgcaaaccttaaaggagagcaggtt 276 |||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 30551 ctatgaggagccaacttgaccaagctacaaacctgaaaggagaacaggtt 30600 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 81 cagtgcttcatctgctttggttggactattagatggtttgttgcaatctggagtttcagc 140 |||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 30318 cagtgcatcgtctgctttggttggactattggatggtttgttgcaatctggaacttcagc 30377 Query: 141 tgcaccaagaaaaaagatag 160 ||||| | |||||||||||| Sbjct: 30378 tgcacaacgaaaaaagatag 30397 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 271 caggttgcagcgagggtaaagtcggatgatgaaaaagacgagtggtttgtggtgaaggtc 330 ||||||||||| | ||| || || || || |||||||| || ||||||||||||||||| Sbjct: 31830 caggttgcagctaaggtcaaatcagacgaagaaaaagatgaatggtttgtggtgaaggtg 31889 Query: 331 atacatttcgataaggaaacaaaaga 356 |||||||||||||||||||||||||| Sbjct: 31890 atacatttcgataaggaaacaaaaga 31915 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 364 gtactggatgaggagcctggtgatgatgaagagagcgcccaaaagtttgaga 415 ||||| ||||||||||| ||||| ||||||||||| |||||||||| ||||| Sbjct: 32948 gtacttgatgaggagccaggtgacgatgaagagagtgcccaaaagtatgaga 32999 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 589 ctcttatttgatgatgacgaagaggatgggaatctacca 627 ||||| |||||||||||||| |||||||| ||||||||| Sbjct: 38534 ctcttgtttgatgatgacgaggaggatggaaatctacca 38572
>gb|AY106544.1| Zea mays PCO119134 mRNA sequence Length = 521 Score = 137 bits (69), Expect = 5e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 64 ctctctgagagtgaaatcagtgcttcatctgctttggttggactattagatggtttgttg 123 |||||||||| |||||||||||| ||| ||||||| ||||| ||||||||||||||||| Sbjct: 370 ctctctgagaatgaaatcagtgcctcaaatgctttgattggattattagatggtttgttg 429 Query: 124 caatctggagtttcagctgcaccaagaaaaaagatagaaatcagtgaacagaaaaagaag 183 |||||||||| |||| |||||| || |||||||||||| | |||| |||||||||||| Sbjct: 430 caatctggagcttcaactgcacaaaagaaaaagatagaagttggtgagcagaaaaagaag 489 Query: 184 aggatgaagtccgatac 200 ||||| ||||| ||||| Sbjct: 490 aggatcaagtctgatac 506
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 357 atttgaagtactggatgaggagcctggtgatgatgaagagagc 399 |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 24549 atttgaagtactagatgaggagcctggtgatgatgaagagagc 24591
>ref|NM_113661.3| Arabidopsis thaliana unknown protein AT3G27460 mRNA, complete cds Length = 1322 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 313 tggtttgtggtgaaggtcatacatttcgataaggaaacaaaagaatttgaagtactggat 372 |||||||||||||| || || || ||||| | |||||||||||| |||||||||| ||| Sbjct: 710 tggtttgtggtgaaagttattcacttcgacagagaaacaaaagaagttgaagtacttgat 769 Query: 373 gaggagcctggtgatgatgaaga 395 || || || || ||||||||||| Sbjct: 770 gaagaaccaggagatgatgaaga 792
>ref|NM_123419.2| Arabidopsis thaliana unknown protein AT5G40550 mRNA, complete cds Length = 1283 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 313 tggtttgtggtgaaggtcatacatttcgataaggaaacaaaagaatttgaagtactggat 372 ||||||||||| || || || || ||||||| |||||||||||| |||||||||| ||| Sbjct: 634 tggtttgtggttaaagttattcacttcgatagagaaacaaaagaagttgaagtacttgat 693 Query: 373 gaggagcctggtgatgatgaaga 395 || || || || ||||||||||| Sbjct: 694 gaagaaccaggagatgatgaaga 716 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 505 gtcttagctgtttatcctggcacaacagcact 536 ||||||||||| ||||| || ||||||||||| Sbjct: 820 gtcttagctgtatatcccgggacaacagcact 851
>gb|AY122985.1| Arabidopsis thaliana unknown protein (At3g27460) mRNA, complete cds Length = 844 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 313 tggtttgtggtgaaggtcatacatttcgataaggaaacaaaagaatttgaagtactggat 372 |||||||||||||| || || || ||||| | |||||||||||| |||||||||| ||| Sbjct: 445 tggtttgtggtgaaagttattcacttcgacagagaaacaaaagaagttgaagtacttgat 504 Query: 373 gaggagcctggtgatgatgaaga 395 || || || || ||||||||||| Sbjct: 505 gaagaaccaggagatgatgaaga 527
>gb|AY080609.1| Arabidopsis thaliana unknown protein (At3g27460) mRNA, complete cds Length = 1355 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 313 tggtttgtggtgaaggtcatacatttcgataaggaaacaaaagaatttgaagtactggat 372 |||||||||||||| || || || ||||| | |||||||||||| |||||||||| ||| Sbjct: 715 tggtttgtggtgaaagttattcacttcgacagagaaacaaaagaagttgaagtacttgat 774 Query: 373 gaggagcctggtgatgatgaaga 395 || || || || ||||||||||| Sbjct: 775 gaagaaccaggagatgatgaaga 797
>gb|BT024494.1| Arabidopsis thaliana At5g40550 mRNA, complete cds Length = 822 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 313 tggtttgtggtgaaggtcatacatttcgataaggaaacaaaagaatttgaagtactggat 372 ||||||||||| || || || || ||||||| |||||||||||| |||||||||| ||| Sbjct: 454 tggtttgtggttaaagttattcacttcgatagagaaacaaaagaagttgaagtacttgat 513 Query: 373 gaggagcctggtgatgatgaaga 395 || || || || ||||||||||| Sbjct: 514 gaagaaccaggagatgatgaaga 536 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 505 gtcttagctgtttatcctggcacaacagcact 536 ||||||||||| ||||| || ||||||||||| Sbjct: 640 gtcttagctgtatatcccgggacaacagcact 671
>gb|BT022070.1| Arabidopsis thaliana unknown protein (At5g40550) mRNA, complete cds Length = 1181 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 313 tggtttgtggtgaaggtcatacatttcgataaggaaacaaaagaatttgaagtactggat 372 ||||||||||| || || || || ||||||| |||||||||||| |||||||||| ||| Sbjct: 671 tggtttgtggttaaagttattcacttcgatagagaaacaaaagaagttgaagtacttgat 730 Query: 373 gaggagcctggtgatgatgaaga 395 || || || || ||||||||||| Sbjct: 731 gaagaaccaggagatgatgaaga 753 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 505 gtcttagctgtttatcctggcacaacagcact 536 ||||||||||| ||||| || ||||||||||| Sbjct: 857 gtcttagctgtatatcccgggacaacagcact 888
>emb|BX120001.10| Zebrafish DNA sequence from clone CH211-217J8 in linkage group 16, complete sequence Length = 211279 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 76 gaaatcagtgcttcatctgctttgg 100 ||||||||||||||||||||||||| Sbjct: 73779 gaaatcagtgcttcatctgctttgg 73803
>gb|U53337.2| Caenorhabditis elegans cosmid R02E12, complete sequence Length = 39151 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 338 tcgataaggaaacaaaagaatt 359 |||||||||||||||||||||| Sbjct: 724 tcgataaggaaacaaaagaatt 703
>ref|XM_780100.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 (LOC580019), mRNA Length = 1621 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 369 ggatgaggagcctggtgatgatgaagagag 398 |||||||||| |||||||||||||||||| Sbjct: 34 ggatgaggagggtggtgatgatgaagagag 5
>gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, complete sequence Length = 152183 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 agatagaaatcagtgaacaga 175 ||||||||||||||||||||| Sbjct: 148607 agatagaaatcagtgaacaga 148627
>gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, complete sequence Length = 177269 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 aaggaaacaaaagaatttgaa 363 ||||||||||||||||||||| Sbjct: 30227 aaggaaacaaaagaatttgaa 30207
>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence Length = 161996 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gtggattttatgtgcaagcaa 58 ||||||||||||||||||||| Sbjct: 114948 gtggattttatgtgcaagcaa 114928
>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence Length = 167597 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 aaggaaacaaaagaatttgaa 363 ||||||||||||||||||||| Sbjct: 68397 aaggaaacaaaagaatttgaa 68417
>emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chromosome 13 Contains part of the GPC6 gene for glypican 6 and the 3' end of a novel gene, complete sequence Length = 150021 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 gctgcaccaagaaaaaagatagaaa 163 ||||||| ||||||||||||||||| Sbjct: 109240 gctgcactaagaaaaaagatagaaa 109264
>gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, complete sequence Length = 150125 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 agatagaaatcagtgaacaga 175 ||||||||||||||||||||| Sbjct: 82573 agatagaaatcagtgaacaga 82553
>gb|AC021850.8|AC021850 Homo sapiens BAC clone RP11-389E17 from 4, complete sequence Length = 206966 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 aagaaaaaagatagaaatcagtgaacagaaaaagaag 183 ||||||||||| ||||| |||||| ||||||||||| Sbjct: 108126 aagaaaaaagaaagaaaaaagtgaaaagaaaaagaag 108162
>gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, complete sequence Length = 208801 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 tttcagctgcaccaagaaaaa 154 ||||||||||||||||||||| Sbjct: 63241 tttcagctgcaccaagaaaaa 63261
>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete sequence Length = 307443 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 gtggattttatgtgcaagcaa 58 ||||||||||||||||||||| Sbjct: 247697 gtggattttatgtgcaagcaa 247717
>gb|BC077199.1| Xenopus laevis hypothetical LOC496372, mRNA (cDNA clone MGC:78932 IMAGE:4202853), complete cds Length = 1128 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 ctgtttatcctggcacaacagcact 536 |||||||||||||||| |||||||| Sbjct: 702 ctgtttatcctggcaccacagcact 726
>gb|U59223.1|PHU59223 Plexaura homomalla 8(R)-lipoxygenase mRNA, complete cds Length = 2401 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 gaggagcctggtgatgatgaa 393 ||||||||||||||||||||| Sbjct: 234 gaggagcctggtgatgatgaa 254
>emb|AL627125.8| Mouse DNA sequence from clone RP23-466N19 on chromosome 4, complete sequence Length = 179068 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 agaaatcagtgaacagaaaaa 179 ||||||||||||||||||||| Sbjct: 146417 agaaatcagtgaacagaaaaa 146437
>ref|NM_120969.2| Arabidopsis thaliana ANAC082; transcription factor AT5G09330 (ANAC082) mRNA, complete cds Length = 1728 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 tatttgatgatgacgaagag 612 |||||||||||||||||||| Sbjct: 818 tatttgatgatgacgaagag 837
>ref|NM_121792.3| Arabidopsis thaliana calcium:sodium antiporter/ cation:cation antiporter AT5G17860 mRNA, complete cds Length = 1987 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 caagattttcttctgcatct 228 |||||||||||||||||||| Sbjct: 291 caagattttcttctgcatct 310
>gb|BT020263.1| Arabidopsis thaliana At5g09330 gene, complete cds Length = 2026 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 tatttgatgatgacgaagag 612 |||||||||||||||||||| Sbjct: 1208 tatttgatgatgacgaagag 1227
>gb|AC145089.7| Mus musculus chromosome 3, clone RP23-268K12, complete sequence Length = 167657 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tgaacagaaaaagaagagga 187 |||||||||||||||||||| Sbjct: 157735 tgaacagaaaaagaagagga 157716
>ref|NM_001033950.1| Strongylocentrotus purpuratus egg permeability glycoprotein (ABCB1), mRNA Length = 3990 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 2076 tgatgatgacgaagaggatg 2095
>gb|AC124107.8| Mus musculus chromosome 5, clone RP24-317M4, complete sequence Length = 194641 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 aagttacctatgtcatatattatt 447 ||||||| |||||||||||||||| Sbjct: 111516 aagttacttatgtcatatattatt 111493
>ref|XM_459173.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D17237g) partial mRNA Length = 2100 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 321 tgatgatgacgaagaggatg 340
>gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13A15, complete sequence Length = 213181 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cagaaaaagaagaggatgaa 191 |||||||||||||||||||| Sbjct: 35612 cagaaaaagaagaggatgaa 35631
>ref|NM_001040465.1| Gallus gallus Dicer1, Dcr-1 homolog (Drosophila) (DICER1), mRNA Length = 6152 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 4272 tgatgatgacgaagaggatg 4291
>gb|AC087841.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-415I19, complete sequence Length = 198053 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cagaaaaagaagaggatgaa 191 |||||||||||||||||||| Sbjct: 194001 cagaaaaagaagaggatgaa 194020
>ref|XM_457407.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B10659g) partial mRNA Length = 1086 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 459 tgatgatgacgaagaggatg 440
>ref|XM_716947.1| Candida albicans SC5314 hypothetical protein (CaO19_11453), mRNA Length = 744 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 606 tgatgatgacgaagaggatg 625 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 588 tgatgatgacgaagaggatg 607
>ref|XM_716786.1| Candida albicans SC5314 hypothetical protein (CaO19_3970), mRNA Length = 744 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 606 tgatgatgacgaagaggatg 625 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 588 tgatgatgacgaagaggatg 607
>gb|BT013976.1| Lycopersicon esculentum clone 133021F, mRNA sequence Length = 1181 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 350 caaaagaatttgaagtactggatgaggagcctggtgatga 389 |||||||||||||||| | ||||||||||| || ||||| Sbjct: 583 caaaagaatttgaagttttagatgaggagccgggagatga 622 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cagaaaaagaagaggatgaa 191 |||||||||||||||||||| Sbjct: 405 cagaaaaagaagaggatgaa 424
>gb|AY701853.1| Strongylocentrotus purpuratus egg permeability glycoprotein (ABCB1) mRNA, complete cds Length = 3990 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 2076 tgatgatgacgaagaggatg 2095
>ref|XM_743920.1| Aspergillus fumigatus Af293 metalloreductase (Afu7g04970) partial mRNA Length = 1902 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gatgatgaagagagcgccca 404 |||||||||||||||||||| Sbjct: 912 gatgatgaagagagcgccca 893
>gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosome 3, complete sequence Length = 201277 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tgaacagaaaaagaagagga 187 |||||||||||||||||||| Sbjct: 98418 tgaacagaaaaagaagagga 98399
>emb|AL032664.1|CEY91F4A Caenorhabditis elegans YAC Y91F4A, complete sequence Length = 5454 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tgaacagaaaaagaagagga 187 |||||||||||||||||||| Sbjct: 3741 tgaacagaaaaagaagagga 3760 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tgaacagaaaaagaagagga 187 |||||||||||||||||||| Sbjct: 1403 tgaacagaaaaagaagagga 1384
>gb|AC117187.3| Mus musculus BAC clone RP23-41M4 from 1, complete sequence Length = 138404 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 ggcaagtcttagctgtttat 519 |||||||||||||||||||| Sbjct: 123103 ggcaagtcttagctgtttat 123084
>emb|CR727366.2|CNS0GO6K Tetraodon nigroviridis full-length cDNA Length = 1356 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 gatgatgacgaagaggatgg 617 |||||||||||||||||||| Sbjct: 210 gatgatgacgaagaggatgg 229
>gb|AC091507.2| Sus scrofa clone RP44-397B10, complete sequence Length = 174031 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agaaaaagaagaggatgaag 192 |||||||||||||||||||| Sbjct: 118074 agaaaaagaagaggatgaag 118093
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 aacagaaaaagaagaggatg 189 |||||||||||||||||||| Sbjct: 3201387 aacagaaaaagaagaggatg 3201368
>gb|AC110176.8| Mus musculus, clone RP23-304C24, complete sequence Length = 234714 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 aaggaaacaaaagaatttgaagta 366 ||||||||||||||| |||||||| Sbjct: 156414 aaggaaacaaaagaagttgaagta 156391
>emb|AL161744.7| Human DNA sequence from clone RP5-846F13 on chromosome 1p21.1-22.1 Contains part of the gene for a novel protein and the 5' end of a novel gene (FLJ38225), complete sequence Length = 87187 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aagatagaaatcagtgaaca 173 |||||||||||||||||||| Sbjct: 85808 aagatagaaatcagtgaaca 85789
>gb|AC158912.3| Mus musculus chromosome 5, clone RP23-131C17, complete sequence Length = 182161 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 aagttacctatgtcatatattatt 447 ||||||| |||||||||||||||| Sbjct: 162554 aagttacttatgtcatatattatt 162531
>gb|AC167968.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940121D9, complete sequence Length = 108830 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 gatgatgacgaagaggatgg 617 |||||||||||||||||||| Sbjct: 6236 gatgatgacgaagaggatgg 6217
>ref|XM_786036.1| PREDICTED: Strongylocentrotus purpuratus similar to ATP-binding cassette, sub-family B (MDR/TAP), member 1 (LOC586248), partial mRNA Length = 1011 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 618 tgatgatgacgaagaggatg 637
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 1327430 tgatgatgacgaagaggatg 1327449
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 826000 tgatgatgacgaagaggatg 825981
>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project) Length = 103534 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 tatttgatgatgacgaagag 612 |||||||||||||||||||| Sbjct: 34336 tatttgatgatgacgaagag 34317
>emb|CR931802.8| Zebrafish DNA sequence from clone CH211-223A10 in linkage group 13, complete sequence Length = 136909 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 117000 tgatgatgacgaagaggatg 117019
>emb|CR628389.9| Zebrafish DNA sequence from clone DKEYP-81A1 in linkage group 21, complete sequence Length = 197111 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cagaaaaagaagaggatgaa 191 |||||||||||||||||||| Sbjct: 50820 cagaaaaagaagaggatgaa 50839
>gb|AC105933.2| Homo sapiens chromosome 3 clone RP11-454I5, complete sequence Length = 175370 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 aaacaaaagaatttgaagta 366 |||||||||||||||||||| Sbjct: 96331 aaacaaaagaatttgaagta 96312
>gb|AY142021.1| Arabidopsis thaliana At5g17860/MVA3_210 mRNA, complete cds Length = 1713 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 caagattttcttctgcatct 228 |||||||||||||||||||| Sbjct: 261 caagattttcttctgcatct 280
>emb|BX511261.12| Zebrafish DNA sequence from clone DKEYP-59G7 in linkage group 1, complete sequence Length = 185266 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 aagcaagagaactctctgag 72 |||||||||||||||||||| Sbjct: 56564 aagcaagagaactctctgag 56545
>emb|BX842685.6| Zebrafish DNA sequence from clone DKEY-28C10 in linkage group 5, complete sequence Length = 133388 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ttagatggtttgttgcaatc 128 |||||||||||||||||||| Sbjct: 93817 ttagatggtttgttgcaatc 93798
>emb|BX323077.15| Zebrafish DNA sequence from clone DKEYP-110E4 in linkage group 14, complete sequence Length = 195732 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tacaacaagattttcttctg 223 |||||||||||||||||||| Sbjct: 128646 tacaacaagattttcttctg 128627
>dbj|AB253768.1| Gallus gallus Dicer mRNA for Dicer protein, complete cds Length = 6152 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tgatgatgacgaagaggatg 616 |||||||||||||||||||| Sbjct: 4272 tgatgatgacgaagaggatg 4291
>gb|AC099337.2| Homo sapiens chromosome 1 clone RP11-365M20, complete sequence Length = 179350 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 aagaaaaaagatagaaatcagtga 170 |||||||||||||| ||||||||| Sbjct: 87096 aagaaaaaagataggaatcagtga 87073
>gb|AC105460.4| Homo sapiens BAC clone RP11-297P16 from 4, complete sequence Length = 185755 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aaaagatagaaatcagtgaa 171 |||||||||||||||||||| Sbjct: 137922 aaaagatagaaatcagtgaa 137941
>gb|AC005885.1| Homo sapiens 12q24.2 PAC RPCI5-1135M4 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 84780 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 taaggaaacaaaagaatttgaagt 365 |||||||||||||| ||||||||| Sbjct: 53449 taaggaaacaaaagcatttgaagt 53472
>gb|AF462830.1|AF462830 Arabidopsis thaliana AT5g17860/MVA3_210 mRNA, complete cds Length = 1871 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 caagattttcttctgcatct 228 |||||||||||||||||||| Sbjct: 291 caagattttcttctgcatct 310
>gb|AC008839.7| Homo sapiens chromosome 5 clone CTD-2152D10, complete sequence Length = 104412 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 accaagaaaaaagatagaaa 163 |||||||||||||||||||| Sbjct: 55060 accaagaaaaaagatagaaa 55041
>ref|XM_681654.1| PREDICTED: Danio rerio similar to phospholipase D3 (predicted) (LOC558442), mRNA Length = 2821 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tacaacaagattttcttctg 223 |||||||||||||||||||| Sbjct: 905 tacaacaagattttcttctg 886
>emb|BX247866.12| Zebrafish DNA sequence from clone DKEY-216J12 in linkage group 1, complete sequence Length = 197473 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aagcaagagaactctctgag 72 |||||||||||||||||||| Sbjct: 82811 aagcaagagaactctctgag 82830
>gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone RP23-326L17, complete sequence Length = 218905 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 aaatcagtgaacagaaaaag 180 |||||||||||||||||||| Sbjct: 138243 aaatcagtgaacagaaaaag 138224
>emb|BX831091.1|CNS0A0PM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1728 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 caagattttcttctgcatct 228 |||||||||||||||||||| Sbjct: 254 caagattttcttctgcatct 273
>emb|BX832883.1|CNS0A0FX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1769 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 caagattttcttctgcatct 228 |||||||||||||||||||| Sbjct: 244 caagattttcttctgcatct 263
>gb|AC084447.1|AC084447 Caenorhabditis briggsae cosmid CB019G12, complete sequence Length = 88839 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 tcgataaggaaacaaaagaa 357 |||||||||||||||||||| Sbjct: 24760 tcgataaggaaacaaaagaa 24741
>gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, complete sequence Length = 199704 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 aaatcagtgaacagaaaaag 180 |||||||||||||||||||| Sbjct: 83848 aaatcagtgaacagaaaaag 83829
>gb|AC171014.3| Gallus gallus BAC clone CH261-89A18 from chromosome ul, complete sequence Length = 181265 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 aatcagtgaacagaaaaagaagag 185 |||||||| ||||||||||||||| Sbjct: 108830 aatcagtgcacagaaaaagaagag 108807
>dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7 Length = 40548 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 caagattttcttctgcatct 228 |||||||||||||||||||| Sbjct: 4639 caagattttcttctgcatct 4620
>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13 Length = 85992 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 505 gtcttagctgtttatcctggcacaacagcact 536 ||||||||||| ||||| || ||||||||||| Sbjct: 17481 gtcttagctgtatatcccgggacaacagcact 17512
>ref|XM_555939.1| Anopheles gambiae str. PEST ENSANGP00000025534 (ENSANGG00000025031), partial mRNA Length = 579 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gttgatgccatgatggctag 32 |||||||||||||||||||| Sbjct: 232 gttgatgccatgatggctag 251
>emb|BX663517.21| Zebrafish DNA sequence from clone CH211-145E12 in linkage group 22, complete sequence Length = 83851 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ttagatggtttgttgcaatc 128 |||||||||||||||||||| Sbjct: 56988 ttagatggtttgttgcaatc 56969
>emb|BX908390.7| Zebrafish DNA sequence from clone CH211-113C15 in linkage group 18, complete sequence Length = 31676 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ttagatggtttgttgcaatc 128 |||||||||||||||||||| Sbjct: 24057 ttagatggtttgttgcaatc 24076
>emb|BX255963.11| Zebrafish DNA sequence from clone CH211-195D17 in linkage group 20, complete sequence Length = 103956 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ttagatggtttgttgcaatc 128 |||||||||||||||||||| Sbjct: 52238 ttagatggtttgttgcaatc 52219
>emb|CT485607.8| Mouse DNA sequence from clone RP23-157B3 on chromosome 9, complete sequence Length = 197959 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aaatcagtgaacagaaaaag 180 |||||||||||||||||||| Sbjct: 38659 aaatcagtgaacagaaaaag 38678
>emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, complete sequence Length = 195316 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ttagatggtttgttgcaatc 128 |||||||||||||||||||| Sbjct: 112071 ttagatggtttgttgcaatc 112052
>emb|AL663104.17| Mouse DNA sequence from clone RP23-207H18 on chromosome X, complete sequence Length = 211462 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 aaaaagaagaggatgaagtc 194 |||||||||||||||||||| Sbjct: 77475 aaaaagaagaggatgaagtc 77456 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,402,177 Number of Sequences: 3902068 Number of extensions: 7402177 Number of successful extensions: 161370 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 161043 Number of HSP's gapped (non-prelim): 326 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)