| Clone Name | bags6l02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY255673.1| Triticum aestivum methylmalonate semialdehyde dehydrogenase mRNA, partial cds; nuclear gene for mitochondrial product Length = 1415 Score = 1051 bits (530), Expect = 0.0 Identities = 601/622 (96%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 4 tttgttggttccaatacagcaggtatgcatatatattctagcagcatctgcgagtgggaa 63 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 331 tttgttggttccaatacagcaggtatgcatatatattctag-agcatctgcgagtgggaa 389 Query: 64 gcgtgttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcg 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 gcgtgttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcg 449 Query: 124 agnatgctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggtgca 183 || |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 450 ag-atgccacattgaatgcccttattgctgccggttttggtgcagctgggcaaaggtgca 508 Query: 184 tggcattgagcactgctgttttcgttggaggttcagaaccatgggaagatgaactagtca 243 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 509 tggcattgagcactgctgtttttgttggaggttcagaaccatgggaggatgaactagtca 568 Query: 244 aacgtgcaagcagtcttgtagttaattctggaacagctaatgatgcagaccttggtccag 303 ||||||||||||| |||||||||||| | |||||||||||||||||||| |||||||||| Sbjct: 569 aacgtgcaagcagccttgtagttaataccggaacagctaatgatgcagatcttggtccag 628 Query: 304 tgatcagtagacaggccaaggaccgcatctgcaagttagtccaaagtggtgttgacagtg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 629 tgatcagtagacaggccaaggaccgcatctgcaagttagtccaaagtggtgctgacagtg 688 Query: 364 gcgctcggattgtgctggatgggagggagattgtggttcctcaattcgaggatggcaact 423 | ||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 689 gtgctcgacttgtgctggatggaagggagattgtggttcctcaatttgaggatggcaact 748 Query: 424 ttgttggtccaactgtgttggctgatgttaaaagtgatatggagtgttacaaggaggaaa 483 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 749 ttattggtccaactgtgttggctgatgttaaaagtgatatggagtgttaccaggaggaaa 808 Query: 484 tttttggtccagttcttctcttgatgaaggcagagagcctagatgatgccatacaaattg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 tttttggtccagttcttctcttgatgaaggcagagagcctagatgatgccatacaaattg 868 Query: 544 tgaacagaaacaagtatggcaatggggcttccatctttaccacatctggtgtctcagcaa 603 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 869 taaacagaaacaagtatggcaatggggcttccatctttaccacgtctggtgtctcagcaa 928 Query: 604 ggaaatttcagacagacattga 625 ||||||||||||| |||||||| Sbjct: 929 ggaaatttcagacggacattga 950
>ref|XM_476941.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 646 bits (326), Expect = 0.0 Identities = 550/622 (88%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 4 tttgttggttccaatacagcaggtatgcatatatattctagcagcatctgcgagtgggaa 63 |||||||||||||||| ||| |||||||||||||||||||| |||||| || | ||||| Sbjct: 778 tttgttggttccaatatagctggtatgcatatatattctag-agcatcggcaaaggggaa 836 Query: 64 gcgtgttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcg 123 ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 837 gcgtgttcagtctaatatgggtgcaaagaatcatgcaattatccttcctgatgctgaccg 896 Query: 124 agnatgctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggtgca 183 || |||| ||| ||||||||||||||||||| ||||||||||| || ||||||||||| | Sbjct: 897 ag-atgccacactgaatgcccttattgctgctggttttggtgctgctgggcaaaggtgta 955 Query: 184 tggcattgagcactgctgttttcgttggaggttcagaaccatgggaagatgaactagtca 243 |||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct: 956 tggcattgagcactgctgtttttgttggaggttcagagccatgggaggatgagctagtca 1015 Query: 244 aacgtgcaagcagtcttgtagttaattctggaacagctaatgatgcagaccttggtccag 303 ||||||||||||| ||||| |||||||| |||| |||| |||||||||||||||||||| Sbjct: 1016 aacgtgcaagcagccttgtggttaattcaggaatggctagtgatgcagaccttggtccag 1075 Query: 304 tgatcagtagacaggccaaggaccgcatctgcaagttagtccaaagtggtgttgacagtg 363 ||||||| | |||||| ||||| || |||||||| ||| | |||||||||| ||| | || Sbjct: 1076 tgatcagcaaacaggctaaggaacgtatctgcaaattaatacaaagtggtgctgataatg 1135 Query: 364 gcgctcggattgtgctggatgggagggagattgtggttcctcaattcgaggatggcaact 423 | ||||| | |||| ||||| || || |||||||||||| | |||||| |||| || | Sbjct: 1136 gtgctcgtgtgctgcttgatggaagagatattgtggttcctaacttcgagaatggtaatt 1195 Query: 424 ttgttggtccaactgtgttggctgatgttaaaagtgatatggagtgttacaaggaggaaa 483 ||||||||||||| | | ||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1196 ttgttggtccaacactccttgctgatgttaaaagtgaaatggaatgttacaaggaggaga 1255 Query: 484 tttttggtccagttcttctcttgatgaaggcagagagcctagatgatgccatacaaattg 543 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 1256 tttttggtccagttcttctcttgatgaaggctgagagcctagatgatgctatccaaattg 1315 Query: 544 tgaacagaaacaagtatggcaatggggcttccatctttaccacatctggtgtctcagcaa 603 ||||||||||||| ||||||||||| || ||||| ||||| ||||||||||| || |||| Sbjct: 1316 tgaacagaaacaaatatggcaatggagcatccatatttacaacatctggtgtgtctgcaa 1375 Query: 604 ggaaatttcagacagacattga 625 |||||||||| ||||||||||| Sbjct: 1376 ggaaatttcaaacagacattga 1397
>dbj|AK121280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H13, full insert sequence Length = 1945 Score = 646 bits (326), Expect = 0.0 Identities = 550/622 (88%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 4 tttgttggttccaatacagcaggtatgcatatatattctagcagcatctgcgagtgggaa 63 |||||||||||||||| ||| |||||||||||||||||||| |||||| || | ||||| Sbjct: 886 tttgttggttccaatatagctggtatgcatatatattctag-agcatcggcaaaggggaa 944 Query: 64 gcgtgttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcg 123 ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 945 gcgtgttcagtctaatatgggtgcaaagaatcatgcaattatccttcctgatgctgaccg 1004 Query: 124 agnatgctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggtgca 183 || |||| ||| ||||||||||||||||||| ||||||||||| || ||||||||||| | Sbjct: 1005 ag-atgccacactgaatgcccttattgctgctggttttggtgctgctgggcaaaggtgta 1063 Query: 184 tggcattgagcactgctgttttcgttggaggttcagaaccatgggaagatgaactagtca 243 |||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct: 1064 tggcattgagcactgctgtttttgttggaggttcagagccatgggaggatgagctagtca 1123 Query: 244 aacgtgcaagcagtcttgtagttaattctggaacagctaatgatgcagaccttggtccag 303 ||||||||||||| ||||| |||||||| |||| |||| |||||||||||||||||||| Sbjct: 1124 aacgtgcaagcagccttgtggttaattcaggaatggctagtgatgcagaccttggtccag 1183 Query: 304 tgatcagtagacaggccaaggaccgcatctgcaagttagtccaaagtggtgttgacagtg 363 ||||||| | |||||| ||||| || |||||||| ||| | |||||||||| ||| | || Sbjct: 1184 tgatcagcaaacaggctaaggaacgtatctgcaaattaatacaaagtggtgctgataatg 1243 Query: 364 gcgctcggattgtgctggatgggagggagattgtggttcctcaattcgaggatggcaact 423 | ||||| | |||| ||||| || || |||||||||||| | |||||| |||| || | Sbjct: 1244 gtgctcgtgtgctgcttgatggaagagatattgtggttcctaacttcgagaatggtaatt 1303 Query: 424 ttgttggtccaactgtgttggctgatgttaaaagtgatatggagtgttacaaggaggaaa 483 ||||||||||||| | | ||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1304 ttgttggtccaacactccttgctgatgttaaaagtgaaatggaatgttacaaggaggaga 1363 Query: 484 tttttggtccagttcttctcttgatgaaggcagagagcctagatgatgccatacaaattg 543 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 1364 tttttggtccagttcttctcttgatgaaggctgagagcctagatgatgctatccaaattg 1423 Query: 544 tgaacagaaacaagtatggcaatggggcttccatctttaccacatctggtgtctcagcaa 603 ||||||||||||| ||||||||||| || ||||| ||||| ||||||||||| || |||| Sbjct: 1424 tgaacagaaacaaatatggcaatggagcatccatatttacaacatctggtgtgtctgcaa 1483 Query: 604 ggaaatttcagacagacattga 625 |||||||||| ||||||||||| Sbjct: 1484 ggaaatttcaaacagacattga 1505
>dbj|AK065917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045P03, full insert sequence Length = 1132 Score = 646 bits (326), Expect = 0.0 Identities = 550/622 (88%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 4 tttgttggttccaatacagcaggtatgcatatatattctagcagcatctgcgagtgggaa 63 |||||||||||||||| ||| |||||||||||||||||||| |||||| || | ||||| Sbjct: 103 tttgttggttccaatatagctggtatgcatatatattctag-agcatcggcaaaggggaa 161 Query: 64 gcgtgttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcg 123 ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 162 gcgtgttcagtctaatatgggtgcaaagaatcatgcaattatccttcctgatgctgaccg 221 Query: 124 agnatgctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggtgca 183 || |||| ||| ||||||||||||||||||| ||||||||||| || ||||||||||| | Sbjct: 222 ag-atgccacactgaatgcccttattgctgctggttttggtgctgctgggcaaaggtgta 280 Query: 184 tggcattgagcactgctgttttcgttggaggttcagaaccatgggaagatgaactagtca 243 |||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct: 281 tggcattgagcactgctgtttttgttggaggttcagagccatgggaggatgagctagtca 340 Query: 244 aacgtgcaagcagtcttgtagttaattctggaacagctaatgatgcagaccttggtccag 303 ||||||||||||| ||||| |||||||| |||| |||| |||||||||||||||||||| Sbjct: 341 aacgtgcaagcagccttgtggttaattcaggaatggctagtgatgcagaccttggtccag 400 Query: 304 tgatcagtagacaggccaaggaccgcatctgcaagttagtccaaagtggtgttgacagtg 363 ||||||| | |||||| ||||| || |||||||| ||| | |||||||||| ||| | || Sbjct: 401 tgatcagcaaacaggctaaggaacgtatctgcaaattaatacaaagtggtgctgataatg 460 Query: 364 gcgctcggattgtgctggatgggagggagattgtggttcctcaattcgaggatggcaact 423 | ||||| | |||| ||||| || || |||||||||||| | |||||| |||| || | Sbjct: 461 gtgctcgtgtgctgcttgatggaagagatattgtggttcctaacttcgagaatggtaatt 520 Query: 424 ttgttggtccaactgtgttggctgatgttaaaagtgatatggagtgttacaaggaggaaa 483 ||||||||||||| | | ||||||||||||||||| ||||| |||||||||||||| | Sbjct: 521 ttgttggtccaacactccttgctgatgttaaaagtgaaatggaatgttacaaggaggaga 580 Query: 484 tttttggtccagttcttctcttgatgaaggcagagagcctagatgatgccatacaaattg 543 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 581 tttttggtccagttcttctcttgatgaaggctgagagcctagatgatgctatccaaattg 640 Query: 544 tgaacagaaacaagtatggcaatggggcttccatctttaccacatctggtgtctcagcaa 603 ||||||||||||| ||||||||||| || ||||| ||||| ||||||||||| || |||| Sbjct: 641 tgaacagaaacaaatatggcaatggagcatccatatttacaacatctggtgtgtctgcaa 700 Query: 604 ggaaatttcagacagacattga 625 |||||||||| ||||||||||| Sbjct: 701 ggaaatttcaaacagacattga 722
>gb|AY107696.1| Zea mays PCO061337 mRNA sequence Length = 1262 Score = 622 bits (314), Expect = e-175 Identities = 549/625 (87%), Gaps = 2/625 (0%) Strand = Plus / Plus Query: 1 tcttttgttggttccaatacagcaggtatgcatatatattctagcagcatctgcgagtgg 60 ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| || Sbjct: 57 tcttttgttggttccaatacagctggtatgcatatttattctag-agcatctgctgcagg 115 Query: 61 gaagcgtgttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctga 120 |||||||||||||| || ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 116 caagcgtgttcagtgcaatatgggagcaaagaatcatgcaattatccttcccgatgctga 175 Query: 121 tcgagnatgctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggt 180 | ||| |||||||||||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 176 tagag-atgctacattgaatgcccttattgctgctggatttggtgcagcagggcaaaggt 234 Query: 181 gcatggcattgagcactgctgttttcgttggaggttcagaaccatgggaagatgaactag 240 ||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||| ||| Sbjct: 235 gcatggcattgagcactgctgtttttgttggcggttcagaatcatgggaggatgaattag 294 Query: 241 tcaaacgtgcaagcagtcttgtagttaattctggaacagctaatgatgcagaccttggtc 300 ||||||||||||| | ||||| |||| ||| |||| | |||||||||||||||||||| Sbjct: 295 tcaaacgtgcaagtggccttgttgttagttcaggaatggttaatgatgcagaccttggtc 354 Query: 301 cagtgatcagtagacaggccaaggaccgcatctgcaagttagtccaaagtggtgttgaca 360 |||||||||| |||||| ||||| || ||||| || |||||||||||||||||||||| Sbjct: 355 cagtgatcagccgacaggnaaaggatcgtatctgtaaattagtccaaagtggtgttgaca 414 Query: 361 gtggcgctcggattgtgctggatgggagggagattgtggttcctcaattcgaggatggca 420 |||| ||||| || |||| ||||| || |||| |||||||||| | || ||||| | Sbjct: 415 gtggtgctcgtatattgcttgatggaagaaagatagtggttcctcgctatgaagatggaa 474 Query: 421 actttgttggtccaactgtgttggctgatgttaaaagtgatatggagtgttacaaggagg 480 | |||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||| Sbjct: 475 attttgttggcccaaccattctggctgatgttaaaagtgacatggagtgttacaaggagg 534 Query: 481 aaatttttggtccagttcttctcttgatgaaggcagagagcctagatgatgccatacaaa 540 |||| ||||||||||| |||||||| |||||||| |||||||||||||||||||| |||| Sbjct: 535 aaatatttggtccagtgcttctcttaatgaaggcggagagcctagatgatgccatccaaa 594 Query: 541 ttgtgaacagaaacaagtatggcaatggggcttccatctttaccacatctggtgtctcag 600 || | ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||| | Sbjct: 595 ttataaacagaaacaagtatggcaatggtgcttccatatttacaacatctggcgtctctg 654 Query: 601 caaggaaatttcagacagacattga 625 | ||||||||||| ||||||||||| Sbjct: 655 ccaggaaatttcaaacagacattga 679
>gb|AF045770.1|AF045770 Oryza sativa methylmalonate semi-aldehyde dehydrogenase (MMSDH1) mRNA, complete cds Length = 1864 Score = 618 bits (312), Expect = e-174 Identities = 547/622 (87%), Gaps = 5/622 (0%) Strand = Plus / Plus Query: 4 tttgttggttccaatacagcaggtatgcatatatattctagcagcatctgcgagtgggaa 63 |||||||||||||||| ||| |||||||||||||||||||| |||||| || | ||||| Sbjct: 879 tttgttggttccaatatagctggtatgcatatatattctag-agcatcggcaaaggggaa 937 Query: 64 gcgtgttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcg 123 ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 938 gcgtgttcagtctaatatgggtgcaaagaatcatgcaattatccttcctgatgctgaccg 997 Query: 124 agnatgctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggtgca 183 || |||| ||| ||||||||||||||||||| ||||||||||| |||||||||||||| | Sbjct: 998 ag-atgccacactgaatgcccttattgctgctggttttggtgctgccgggcaaaggtgta 1056 Query: 184 tggcattgagcactgctgttttcgttggaggttcagaaccatgggaagatgaactagtca 243 |||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct: 1057 tggcattgagcactgctgtttttgttggaggttcagagccatgggaggatgagctagtca 1116 Query: 244 aacgtgcaagcagtcttgtagttaattctggaacagctaatgatgcagaccttggtccag 303 ||||||||||||| ||||| |||||||| |||| |||| |||||||||||||||||||| Sbjct: 1117 aacgtgcaagcagccttgtggttaattcaggaatggctagtgatgcagaccttggtccag 1176 Query: 304 tgatcagtagacaggccaaggaccgcatctgcaagttagtccaaagtggtgttgacagtg 363 ||||||| | |||||| ||||| || |||||||| ||| | |||||||||| ||| | || Sbjct: 1177 tgatcagcaaacaggctaaggaacgtatctgcaaattaatacaaagtggtgctgataatg 1236 Query: 364 gcgctcggattgtgctggatgggagggagattgtggttcctcaattcgaggatggcaact 423 | ||||| | |||| ||||| || || |||||||||||| | |||||| |||| || | Sbjct: 1237 gtgctcgtgtgctgcttgatggaagagatattgtggttcctaacttcgagaatggtaatt 1296 Query: 424 ttgttggtccaactgtgttggctgatgttaaaagtgatatggagtgttacaaggaggaaa 483 ||||||||||||| | | ||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1297 ttgttggtccaacactccttgctgatgttaaaagtgaaatggaatgttacaaggaggaga 1356 Query: 484 tttttggtccagttcttctcttgatgaaggcagagagcctagatgatgccatacaaattg 543 |||||||||||| |||||||||||||||| ||||||||| ||||||| || ||||||| Sbjct: 1357 tttttggtccag---ttctcttgatgaaggctgagagcctaaatgatgctatccaaattg 1413 Query: 544 tgaacagaaacaagtatggcaatggggcttccatctttaccacatctggtgtctcagcaa 603 ||||||||||||| ||||||||||| || ||||| ||||| ||||||||||| || |||| Sbjct: 1414 tgaacagaaacaaatatggcaatggagcatccatatttacaacatctggtgtgtctgcaa 1473 Query: 604 ggaaatttcagacagacattga 625 |||||||||| ||||||||||| Sbjct: 1474 ggaaatttcaaacagacattga 1495
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 204 bits (103), Expect = 3e-49 Identities = 146/159 (91%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 69 ttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcgagnat 128 |||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| || Sbjct: 4770082 ttcagtctaatatgggtgcaaagaatcatgcaattatccttcctgatgctgaccgag-at 4770140 Query: 129 gctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggtgcatggca 188 || ||| ||||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 4770141 gccacactgaatgcccttattgctgctggttttggtgctgctgggcaaaggtgtatggca 4770200 Query: 189 ttgagcactgctgttttcgttggaggttcagaaccatgg 227 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 4770201 ttgagcactgctgtttttgttggaggttcagagccatgg 4770239 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 226 gggaagatgaactagtcaaacgtgcaagcagtcttgtagttaattctggaacagctaatg 285 |||| ||||| |||||||||||||||||||| ||||| |||||||| |||| |||| || Sbjct: 4770322 gggaggatgagctagtcaaacgtgcaagcagccttgtggttaattcaggaatggctagtg 4770381 Query: 286 atgcagaccttggtccagtgatcag 310 ||||||||||||||||||||||||| Sbjct: 4770382 atgcagaccttggtccagtgatcag 4770406 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 558 tatggcaatggggcttccatctttaccacatctggtgtctcagcaaggaaatttcagaca 617 ||||||||||| || ||||| ||||| ||||||||||| || |||||||||||||| ||| Sbjct: 4772568 tatggcaatggagcatccatatttacaacatctggtgtgtctgcaaggaaatttcaaaca 4772627 Query: 618 gacattga 625 |||||||| Sbjct: 4772628 gacattga 4772635 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 511 aggcagagagcctagatgatgccatacaaattgtgaacagaaacaagta 559 |||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 4772423 aggctgagagcctagatgatgctatccaaattgtgaacagaaacaagta 4772471 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 475 aggaggaaatttttggtccagttcttctcttgatgaagg 513 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 4772313 aggaggagatttttggtccagttcttctcttgatgaagg 4772351 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 398 ggttcctcaattcgaggatggcaactttgttggtccaactgtgttggctgatgttaaaag 457 ||||||| | |||||| |||| || |||||||||||||| | | |||||||||||||| Sbjct: 4771329 ggttcctaacttcgagaatggtaattttgttggtccaacactccttgctgatgttaaaag 4771388 Query: 458 tgatatggagtgttacaagg 477 ||| ||||| |||||||||| Sbjct: 4771389 tgaaatggaatgttacaagg 4771408 Score = 50.1 bits (25), Expect = 0.009 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 25 ggtatgcatatatattctagcagcatctgcgagtgggaagcgtgttcag 73 |||||||||||||||||||| |||||| || | ||||||||||||||| Sbjct: 4769935 ggtatgcatatatattctag-agcatcggcaaaggggaagcgtgttcag 4769982
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 204 bits (103), Expect = 3e-49 Identities = 146/159 (91%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 69 ttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcgagnat 128 |||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| || Sbjct: 87992 ttcagtctaatatgggtgcaaagaatcatgcaattatccttcctgatgctgaccgag-at 88050 Query: 129 gctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggtgcatggca 188 || ||| ||||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 88051 gccacactgaatgcccttattgctgctggttttggtgctgctgggcaaaggtgtatggca 88110 Query: 189 ttgagcactgctgttttcgttggaggttcagaaccatgg 227 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 88111 ttgagcactgctgtttttgttggaggttcagagccatgg 88149 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 226 gggaagatgaactagtcaaacgtgcaagcagtcttgtagttaattctggaacagctaatg 285 |||| ||||| |||||||||||||||||||| ||||| |||||||| |||| |||| || Sbjct: 88232 gggaggatgagctagtcaaacgtgcaagcagccttgtggttaattcaggaatggctagtg 88291 Query: 286 atgcagaccttggtccagtgatcag 310 ||||||||||||||||||||||||| Sbjct: 88292 atgcagaccttggtccagtgatcag 88316 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 558 tatggcaatggggcttccatctttaccacatctggtgtctcagcaaggaaatttcagaca 617 ||||||||||| || ||||| ||||| ||||||||||| || |||||||||||||| ||| Sbjct: 90478 tatggcaatggagcatccatatttacaacatctggtgtgtctgcaaggaaatttcaaaca 90537 Query: 618 gacattga 625 |||||||| Sbjct: 90538 gacattga 90545 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 511 aggcagagagcctagatgatgccatacaaattgtgaacagaaacaagta 559 |||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90333 aggctgagagcctagatgatgctatccaaattgtgaacagaaacaagta 90381 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 475 aggaggaaatttttggtccagttcttctcttgatgaagg 513 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 90223 aggaggagatttttggtccagttcttctcttgatgaagg 90261 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 398 ggttcctcaattcgaggatggcaactttgttggtccaactgtgttggctgatgttaaaag 457 ||||||| | |||||| |||| || |||||||||||||| | | |||||||||||||| Sbjct: 89239 ggttcctaacttcgagaatggtaattttgttggtccaacactccttgctgatgttaaaag 89298 Query: 458 tgatatggagtgttacaagg 477 ||| ||||| |||||||||| Sbjct: 89299 tgaaatggaatgttacaagg 89318 Score = 50.1 bits (25), Expect = 0.009 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 25 ggtatgcatatatattctagcagcatctgcgagtgggaagcgtgttcag 73 |||||||||||||||||||| |||||| || | ||||||||||||||| Sbjct: 87845 ggtatgcatatatattctag-agcatcggcaaaggggaagcgtgttcag 87892
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002L09 Length = 146343 Score = 204 bits (103), Expect = 3e-49 Identities = 146/159 (91%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 69 ttcagtgtaacatgggtgcaaagaatcatgccattatccttcctgatgctgatcgagnat 128 |||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| || Sbjct: 44595 ttcagtctaatatgggtgcaaagaatcatgcaattatccttcctgatgctgaccgag-at 44653 Query: 129 gctacattgaatgcccttattgctgccggttttggtgcagccgggcaaaggtgcatggca 188 || ||| ||||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 44654 gccacactgaatgcccttattgctgctggttttggtgctgctgggcaaaggtgtatggca 44713 Query: 189 ttgagcactgctgttttcgttggaggttcagaaccatgg 227 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 44714 ttgagcactgctgtttttgttggaggttcagagccatgg 44752 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 226 gggaagatgaactagtcaaacgtgcaagcagtcttgtagttaattctggaacagctaatg 285 |||| ||||| |||||||||||||||||||| ||||| |||||||| |||| |||| || Sbjct: 44835 gggaggatgagctagtcaaacgtgcaagcagccttgtggttaattcaggaatggctagtg 44894 Query: 286 atgcagaccttggtccagtgatcag 310 ||||||||||||||||||||||||| Sbjct: 44895 atgcagaccttggtccagtgatcag 44919 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 558 tatggcaatggggcttccatctttaccacatctggtgtctcagcaaggaaatttcagaca 617 ||||||||||| || ||||| ||||| ||||||||||| || |||||||||||||| ||| Sbjct: 47081 tatggcaatggagcatccatatttacaacatctggtgtgtctgcaaggaaatttcaaaca 47140 Query: 618 gacattga 625 |||||||| Sbjct: 47141 gacattga 47148 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 511 aggcagagagcctagatgatgccatacaaattgtgaacagaaacaagta 559 |||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 46936 aggctgagagcctagatgatgctatccaaattgtgaacagaaacaagta 46984 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 475 aggaggaaatttttggtccagttcttctcttgatgaagg 513 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 46826 aggaggagatttttggtccagttcttctcttgatgaagg 46864 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 398 ggttcctcaattcgaggatggcaactttgttggtccaactgtgttggctgatgttaaaag 457 ||||||| | |||||| |||| || |||||||||||||| | | |||||||||||||| Sbjct: 45842 ggttcctaacttcgagaatggtaattttgttggtccaacactccttgctgatgttaaaag 45901 Query: 458 tgatatggagtgttacaagg 477 ||| ||||| |||||||||| Sbjct: 45902 tgaaatggaatgttacaagg 45921 Score = 50.1 bits (25), Expect = 0.009 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 25 ggtatgcatatatattctagcagcatctgcgagtgggaagcgtgttcag 73 |||||||||||||||||||| |||||| || | ||||||||||||||| Sbjct: 44448 ggtatgcatatatattctag-agcatcggcaaaggggaagcgtgttcag 44495
>gb|AC144564.12| Medicago truncatula clone mth2-17n4, complete sequence Length = 130660 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 148 ttgctgccggttttggtgcagccgggcaaaggtgcatggcattgagcactgctgttttcg 207 ||||||| |||||||| || || ||||||||||||||||| | ||||| | |||||||| Sbjct: 158 ttgctgctggttttggagctgctgggcaaaggtgcatggctctcagcacagttgttttcg 99 Query: 208 ttggaggttcagaaccatgg 227 | ||||||||| || ||||| Sbjct: 98 tgggaggttcacaagcatgg 79
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 147 attgctgccggttttggtgcagccgggcaaaggtgcatggcattgagcactgctgttttc 206 |||||||| ||||||||||| || || |||||||||||||| | ||||| | |||||| Sbjct: 64189 attgctgcgggttttggtgctgctggacaaaggtgcatggctctcagcacagttgttttt 64248 Query: 207 gttggaggttcagaaccatgg 227 ||||||| ||| |||||||| Sbjct: 64249 gttggagactcaaaaccatgg 64269 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 475 aggaggaaatttttggtccagttcttct 502 ||||||| |||||||||||||||||||| Sbjct: 65968 aggaggagatttttggtccagttcttct 65995 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 591 ggtgtctcagcaaggaaatttcagacagacattga 625 ||||| || |||||||||||||||||||| ||||| Sbjct: 66343 ggtgtgtctgcaaggaaatttcagacagagattga 66377
>ref|NM_126989.1| Arabidopsis thaliana ALDH6B2; aldehyde dehydrogenase/ oxidoreductase AT2G14170 (ALDH6B2) mRNA, complete cds Length = 2195 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 462 atggagtgttacaaggaggaaatttttggtccagttctt 500 ||||||||||||||||||||||| ||||| || |||||| Sbjct: 1453 atggagtgttacaaggaggaaatatttggccctgttctt 1491
>ref|XM_522903.1| PREDICTED: Pan troglodytes similar to aldehyde dehydrogenase 6A1 precursor; mitochondrial acylating methylmalonate-semialdehyde dehydrogenase (LOC467506), mRNA Length = 1779 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1408 tgttacaaagaggagatttttggtccagttctt 1440
>gb|BC044808.1| Homo sapiens chromosome 14 open reading frame 45, mRNA (cDNA clone IMAGE:4823236) Length = 3070 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 2299 tgttacaaagaggagatttttggtccagttctt 2267
>gb|BC004909.1| Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA clone MGC:4657 IMAGE:3530715), complete cds Length = 1854 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1268 tgttacaaagaggagatttttggtccagttctt 1300
>ref|NM_025057.1| Homo sapiens chromosome 14 open reading frame 45 (C14orf45), mRNA Length = 2157 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1395 tgttacaaagaggagatttttggtccagttctt 1363
>ref|XM_547901.2| PREDICTED: Canis familiaris similar to aldehyde dehydrogenase family 6, subfamily A1 (LOC490779), mRNA Length = 2165 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1239 tgttacaaagaggagatttttggtccagttctt 1271
>gb|AC123898.40| Medicago truncatula clone mth2-31m6, complete sequence Length = 152299 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 475 aggaggaaatttttggtccagttcttctc 503 |||||||||||||||| |||||||||||| Sbjct: 127054 aggaggaaatttttggcccagttcttctc 127082 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Plus Query: 147 attgctgccggttttggtgcagccgggcaaaggtgcatggcattgagcactgctgttttc 206 |||||||| ||||||||||| || || |||||||| ||||| | || || | |||||| Sbjct: 125831 attgctgcaggttttggtgctgctggacaaaggtgtatggctctaagtacagttgttttt 125890 Query: 207 gttggaggttcagaaccatgg 227 |||||||| ||| |||||||| Sbjct: 125891 gttggaggctcaaaaccatgg 125911 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 tgatgcagaccttggtccagt 304 ||||||||||||||||||||| Sbjct: 126223 tgatgcagaccttggtccagt 126243
>ref|NM_005589.2| Homo sapiens aldehyde dehydrogenase 6 family, member A1 (ALDH6A1), nuclear gene encoding mitochondrial protein, mRNA Length = 2183 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1336 tgttacaaagaggagatttttggtccagttctt 1368
>emb|AJ249994.1|HSA249994 Homo sapiens mRNA for methylmalonate semialdehyde dehydrogenase (MMSDH gene) Length = 1760 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1267 tgttacaaagaggagatttttggtccagttctt 1299
>emb|AL834487.1|HSM805595 Homo sapiens mRNA; cDNA DKFZp434O1830 (from clone DKFZp434O1830) Length = 2399 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1637 tgttacaaagaggagatttttggtccagttctt 1605
>emb|CR613362.1| full-length cDNA clone CS0DJ002YF01 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1566 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 513 tgttacaaagaggagatttttggtccagttctt 545
>dbj|AB168673.1| Macaca fascicularis testis cDNA clone: QtsA-14062, similar to human chromosome 14 open reading frame 45 (C14orf45), mRNA, RefSeq: NM_025057.1 Length = 2415 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1634 tgttacaaagaggagatttttggtccagttctt 1602
>dbj|AB168336.1| Macaca fascicularis testis cDNA clone: QtsA-11302, similar to human chromosome 14 open reading frame 45 (C14orf45), mRNA, RefSeq: NM_025057.1 Length = 2650 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1884 tgttacaaagaggagatttttggtccagttctt 1852
>gb|AC148971.3| Medicago truncatula chromosome 2 BAC clone mth2-79e23, complete sequence Length = 108394 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 147 attgctgccggttttggtgcagccgggcaaaggtgcatggcattgagcactgctgttttc 206 |||||||| ||||||||||| || || |||||||| ||||| | || || | |||||| Sbjct: 99658 attgctgcaggttttggtgctgctggacaaaggtgtatggctctaagtacagttgttttt 99599 Query: 207 gttggaggttcagaaccatgg 227 |||||||| ||| |||||||| Sbjct: 99598 gttggaggctcaaaaccatgg 99578 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 475 aggaggaaatttttggtccagttcttctc 503 |||||||||||||||| |||||||||||| Sbjct: 98435 aggaggaaatttttggcccagttcttctc 98407 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 tgatgcagaccttggtccagt 304 ||||||||||||||||||||| Sbjct: 99266 tgatgcagaccttggtccagt 99246
>dbj|AK223244.1| Homo sapiens mRNA for aldehyde dehydrogenase 6A1 precursor variant, clone: STM03756 Length = 1712 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1248 tgttacaaagaggagatttttggtccagttctt 1280
>dbj|AK222687.1| Homo sapiens mRNA for aldehyde dehydrogenase 6A1 precursor variant, clone: CBR04189 Length = 2028 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1274 tgttacaaagaggagatttttggtccagttctt 1306
>ref|NM_175811.2| Bos taurus aldehyde dehydrogenase 6 family, member A1 (ALDH6A1), mRNA Length = 1687 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||||||||| |||||||| ||||||||| Sbjct: 1285 tgttacaaggaggagatttttggcccagttctt 1317
>ref|NM_031057.1| Rattus norvegicus aldehyde dehydrogenase family 6, subfamily A1 (Aldh6a1), mRNA Length = 2059 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1318 tgttacaaagaggagatttttggtccagttctt 1350
>gb|AF148855.1|AF148855 Homo sapiens methylmalonate-semialdehyde dehydrogenase (MMSDH) gene, complete cds Length = 6791 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 6038 tgttacaaagaggagatttttggtccagttctt 6070
>gb|AC005484.2|AC005484 Homo sapiens PAC clone RP5-847O8 from 14q24.3, complete sequence Length = 131943 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 75742 tgttacaaagaggagatttttggtccagttctt 75774
>gb|AF159889.1|AF159889 Homo sapiens methylmalonate semialdehyde dehydrogenase (MMSDH) mRNA, complete cds Length = 1738 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1237 tgttacaaagaggagatttttggtccagttctt 1269
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 473 caaggaggaaatttttggtccagtt 497 ||||||||||||||||||||||||| Sbjct: 574333 caaggaggaaatttttggtccagtt 574357
>dbj|AK026842.1| Homo sapiens cDNA: FLJ23189 fis, clone LNG12061 Length = 2157 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1395 tgttacaaagaggagatttttggtccagttctt 1363
>gb|AF148505.1|AF148505 Homo sapiens methylmalonate-semialdehyde dehydrogenase (MMSDH) mRNA, complete cds Length = 1780 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1279 tgttacaaagaggagatttttggtccagttctt 1311
>gb|BC032371.1| Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA clone MGC:40271 IMAGE:5163797), complete cds Length = 2104 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1336 tgttacaaagaggagatttttggtccagttctt 1368
>gb|M93401.1|RATMSADHA Rattus norvegicus methylmalonate semialdehyde dehydrogenase gene, complete cds Length = 2059 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 1318 tgttacaaagaggagatttttggtccagttctt 1350
>gb|M93405.1|HUMMSADHA Human methylmalonate semialdehyde dehydrogenase gene, complete cds Length = 1423 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| |||||||||||||||||| Sbjct: 922 tgttacaaagaggagatttttggtccagttctt 954
>gb|L08643.1|BOVMMSA Bos taurus methylmalonate semialdehyde dehydrogenase mRNA, complete cds Length = 1687 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||||||||| |||||||| ||||||||| Sbjct: 1285 tgttacaaggaggagatttttggcccagttctt 1317
>ref|XM_631303.1| Dictyostelium discoideum methylmalonate-semialdehyde dehydrogenase (acylating) (DDB0231483), partial mRNA Length = 1587 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagtt 497 |||||||| |||||||| |||||||||||| Sbjct: 1210 tgttacaaagaggaaatctttggtccagtt 1239
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 475 aggaggaaatttttggtccagt 496 |||||||||||||||||||||| Sbjct: 1966492 aggaggaaatttttggtccagt 1966471
>gb|AC003953.1| Homo sapiens chromosome 9, P1 clone 8660 (LBNL H105), complete sequence Length = 75871 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tacagcaggtatgcatatata 38 ||||||||||||||||||||| Sbjct: 46611 tacagcaggtatgcatatata 46631
>gb|BC033440.1| Mus musculus aldehyde dehydrogenase family 6, subfamily A1, mRNA (cDNA clone MGC:28587 IMAGE:4212084), complete cds Length = 3377 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1271 tgttacaaagaggagatatttggtccagttctt 1303
>ref|NM_131685.2| Danio rerio ATPase, Na+/K+ transporting, alpha 3b polypeptide (atp1a3b), mRNA Length = 4801 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 ggaaatttcagacagacattg 624 ||||||||||||||||||||| Sbjct: 517 ggaaatttcagacagacattg 537
>gb|AC110564.7| Mus musculus chromosome 12, clone RP23-292A16, complete sequence Length = 211576 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 22111 tgttacaaagaggagatatttggtccagttctt 22079
>gb|AC120402.10| Mus musculus chromosome 12, clone RP24-354N2, complete sequence Length = 122843 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 104512 tgttacaaagaggagatatttggtccagttctt 104480
>emb|BX908756.12| Zebrafish DNA sequence from clone CH211-190D13 in linkage group 1, complete sequence Length = 134952 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 tgtctcagcaaggaaatttca 613 ||||||||||||||||||||| Sbjct: 126230 tgtctcagcaaggaaatttca 126210
>gb|BC031148.1| Mus musculus aldehyde dehydrogenase family 6, subfamily A1, mRNA (cDNA clone MGC:37325 IMAGE:4975560), complete cds Length = 3478 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1373 tgttacaaagaggagatatttggtccagttctt 1405
>emb|AL391475.7| Human DNA sequence from clone RP11-33G16 on chromosome 9 Contains a novel gene, complete sequence Length = 163058 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tacagcaggtatgcatatata 38 ||||||||||||||||||||| Sbjct: 54903 tacagcaggtatgcatatata 54923
>emb|AL137860.22| Human DNA sequence from clone RP4-633N17 on chromosome 1p34.1-34.3 Contains the 3' end of the SLC9A1 gene for solute carrier family 9 (sodium/hydrogen exchanger), isoform 1 (antiporter, Na+/H+, amiloride sensitive) and a CpG island, complete sequence Length = 121010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 tgatgaaggcagagagcctag 525 ||||||||||||||||||||| Sbjct: 20863 tgatgaaggcagagagcctag 20843
>gb|BC098527.1| Danio rerio ATPase, Na+/K+ transporting, alpha 3b polypeptide, mRNA (cDNA clone MGC:109873 IMAGE:3815587), complete cds Length = 4801 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 ggaaatttcagacagacattg 624 ||||||||||||||||||||| Sbjct: 517 ggaaatttcagacagacattg 537
>emb|CR857453.1| Pongo pygmaeus mRNA; cDNA DKFZp469N105 (from clone DKFZp469N105) Length = 4585 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| ||||||||||| |||||| Sbjct: 1257 tgttacaaagaggagatttttggtccggttctt 1289
>dbj|AK128924.1| Mus musculus cDNA fis, clone TRACH3001119, highly similar to Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor (EC 1.2.1.27) Length = 3357 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1280 tgttacaaagaggagatatttggtccagttctt 1312
>dbj|AK147146.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920188E21 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 3395 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1302 tgttacaaagaggagatatttggtccagttctt 1334
>dbj|AK155814.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730225O04 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 3373 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1299 tgttacaaagaggagatatttggtccagttctt 1331
>dbj|AK169915.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630004C22 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 3365 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1288 tgttacaaagaggagatatttggtccagttctt 1320
>dbj|AK171896.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830018D16 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 3383 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1291 tgttacaaagaggagatatttggtccagttctt 1323
>dbj|AK171581.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730313A18 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 2266 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1302 tgttacaaagaggagatatttggtccagttctt 1334
>dbj|AK170305.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630044D15 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 2265 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1301 tgttacaaagaggagatatttggtccagttctt 1333
>gb|AY008374.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 6 (atp1a3b) mRNA, complete cds Length = 3309 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 ggaaatttcagacagacattg 624 ||||||||||||||||||||| Sbjct: 175 ggaaatttcagacagacattg 195
>dbj|AK082790.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330018G24 product:METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE (EC 1.2.1.27), full insert sequence Length = 3393 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1302 tgttacaaagaggagatatttggtccagttctt 1334
>dbj|AK033587.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130015C07 product:METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE (EC 1.2.1.27) homolog [Mus musculus], full insert sequence Length = 3258 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1275 tgttacaaagaggagatatttggtccagttctt 1307
>gb|AF297860.1|AF297860 Mus musculus methylmalonate-semialdehyde dehydrogenase mRNA, complete cds Length = 3357 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1248 tgttacaaagaggagatatttggtccagttctt 1280
>gb|AF269901.1|AF269901 Staphylococcus epidermidis strain SR1 clone step.1029g12 genomic sequence Length = 3180 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaaatttttggtccagttctt 500 ||||||||||||||||||||| Sbjct: 770 gaaatttttggtccagttctt 790
>dbj|AK219229.1| Mus musculus cDNA, clone:Y2G0147M22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054045, based on BLAT search Length = 259 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 123 tgttacaaagaggagatatttggtccagttctt 155
>dbj|AK215618.1| Mus musculus cDNA, clone:Y2G0135K01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054045, based on BLAT search Length = 255 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 119 tgttacaaagaggagatatttggtccagttctt 151
>dbj|AK205140.1| Mus musculus cDNA, clone:Y1G0150M07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054045, based on BLAT search Length = 379 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 243 tgttacaaagaggagatatttggtccagttctt 275
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaaatttttggtccagttctt 500 ||||||||||||||||||||| Sbjct: 2107724 gaaatttttggtccagttctt 2107744
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaaatttttggtccagttctt 500 ||||||||||||||||||||| Sbjct: 2112968 gaaatttttggtccagttctt 2112988
>ref|NM_134042.1| Mus musculus aldehyde dehydrogenase family 6, subfamily A1 (Aldh6a1), mRNA Length = 3357 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 tgttacaaggaggaaatttttggtccagttctt 500 |||||||| ||||| || ||||||||||||||| Sbjct: 1248 tgttacaaagaggagatatttggtccagttctt 1280
>dbj|AB062885.1| Carassius auratus mRNA for Na,K-ATPase alpha subunit 3, complete cds Length = 4543 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 ggaaatttcagacagacattg 624 ||||||||||||||||||||| Sbjct: 302 ggaaatttcagacagacattg 322
>gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 map MAP_LOC, complete sequence Length = 200238 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 tgatgttaaaagtgatatggagtg 469 ||||||||||||||||||| |||| Sbjct: 79670 tgatgttaaaagtgatatgtagtg 79647
>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence Length = 196427 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gttggaggttcagaaccatg 226 |||||||||||||||||||| Sbjct: 44125 gttggaggttcagaaccatg 44144
>ref|XM_448923.1| Candida glabrata CBS138, CAGL0L03454g partial mRNA Length = 3267 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ttctagcagcatctgcgagt 58 |||||||||||||||||||| Sbjct: 3124 ttctagcagcatctgcgagt 3105
>emb|Z70686.1|CER10H10 Caenorhabditis elegans Cosmid R10H10, complete sequence Length = 35056 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 aaatttcagacagacattga 625 |||||||||||||||||||| Sbjct: 11253 aaatttcagacagacattga 11272
>gb|AC044849.12| Homo sapiens chromosome 8, clone RP11-489E7, complete sequence Length = 149301 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 gttcttctcttgatgaaggcagag 518 ||||||||| |||||||||||||| Sbjct: 5775 gttcttctcatgatgaaggcagag 5752
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 474 aaggaggaaatttttggtccagttcttc 501 ||||||||||||||||| || ||||||| Sbjct: 1493309 aaggaggaaatttttggccctgttcttc 1493336
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ttctagcagcatctgcgagt 58 |||||||||||||||||||| Sbjct: 391746 ttctagcagcatctgcgagt 391765
>emb|AL133522.1|SPAC922 S.pombe chromosome I cosmid c922 Length = 19999 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 aaggaggaaatttttggtccagtt 497 ||||||||||||||||| |||||| Sbjct: 16768 aaggaggaaatttttggaccagtt 16745
>gb|AC182634.3| Gallus gallus BAC clone CH261-141O9 from chromosome 1, complete sequence Length = 187635 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccagttcttctcttgatgaa 511 |||||||||||||||||||| Sbjct: 108601 ccagttcttctcttgatgaa 108582
>gb|AC025444.6| Homo sapiens chromosome 5 clone CTD-2045B17, complete sequence Length = 26137 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tgaaggcagagagcctagat 527 |||||||||||||||||||| Sbjct: 15227 tgaaggcagagagcctagat 15246
>gb|AC116333.2| Homo sapiens chromosome 5 clone CTD-2242E19, complete sequence Length = 112119 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tgaaggcagagagcctagat 527 |||||||||||||||||||| Sbjct: 62201 tgaaggcagagagcctagat 62182
>gb|AC093916.2| Homo sapiens BAC clone RP11-789C2 from 4, complete sequence Length = 162632 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 aagttagtccaaagtggtgt 355 |||||||||||||||||||| Sbjct: 60843 aagttagtccaaagtggtgt 60862
>gb|AC064800.8| Homo sapiens chromosome 18, clone CTD-2001I24, complete sequence Length = 131409 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ggattgtgctggatgggagggaga 393 |||||||| ||||||||||||||| Sbjct: 108669 ggattgtgatggatgggagggaga 108692
>gb|AC091165.15| Homo sapiens chromosome 8, clone RP11-366G13, complete sequence Length = 188456 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gttcttctcttgatgaaggcagag 518 ||||||||| |||||||||||||| Sbjct: 57930 gttcttctcatgatgaaggcagag 57953
>gb|AC093048.1| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39D12, complete sequence Length = 184021 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 aaattgtgaacagaaacaag 557 |||||||||||||||||||| Sbjct: 25095 aaattgtgaacagaaacaag 25114
>ref|NM_001020438.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC922.07c), partial mRNA Length = 1491 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 aaggaggaaatttttggtccagtt 497 ||||||||||||||||| |||||| Sbjct: 1180 aaggaggaaatttttggaccagtt 1203
>gb|AC131254.5| Homo sapiens chromosome 8, clone RP11-94H18, complete sequence Length = 153000 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 gttcttctcttgatgaaggcagag 518 ||||||||| |||||||||||||| Sbjct: 150223 gttcttctcatgatgaaggcagag 150200
>gb|AF188002.1|AF188002 Mus musculus muscle creatine kinase (Mck) gene, promoter region Length = 3357 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gttggaggttcagaaccatg 226 |||||||||||||||||||| Sbjct: 2647 gttggaggttcagaaccatg 2628
>emb|BX322536.4| Zebrafish DNA sequence from clone DKEY-174K12 in linkage group 5, complete sequence Length = 93492 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ttgtgctggatgggagggag 392 |||||||||||||||||||| Sbjct: 40620 ttgtgctggatgggagggag 40639
>gb|M13642.1|MUSCKM1 Mouse muscle-specific form of creatine kinase (MCK) gene, exon 1 and 5' flanking region Length = 1059 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gttggaggttcagaaccatg 226 |||||||||||||||||||| Sbjct: 37 gttggaggttcagaaccatg 18
>emb|BX322604.9| Zebrafish DNA sequence from clone DKEY-10N19 in linkage group 5, complete sequence Length = 175983 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ttgtgctggatgggagggag 392 |||||||||||||||||||| Sbjct: 7006 ttgtgctggatgggagggag 6987
>gb|AC011662.1|AC011662 Drosophila melanogaster, chromosome 2L, region 36D-, BAC clones BACR01G10 and BACR05I08, complete sequence Length = 294942 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 aaattgtgaacagaaacaag 557 |||||||||||||||||||| Sbjct: 286825 aaattgtgaacagaaacaag 286844
>gb|AE003657.3| Drosophila melanogaster chromosome 2L, section 66 of 83 of the complete sequence Length = 265254 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 aaattgtgaacagaaacaag 557 |||||||||||||||||||| Sbjct: 198207 aaattgtgaacagaaacaag 198226
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ttgctgccggttttggtgca 167 |||||||||||||||||||| Sbjct: 4347025 ttgctgccggttttggtgca 4347006
>gb|AC005444.1|AC005444 Drosophila melanogaster, chromosome 2R, region 36D3-36D3, P1 clone DS06379, complete sequence Length = 77685 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 aaattgtgaacagaaacaag 557 |||||||||||||||||||| Sbjct: 25504 aaattgtgaacagaaacaag 25523
>gb|M21390.1|MUSMCKA Mouse muscle creatine kinase (MCK) gene, 5' flank Length = 4101 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gttggaggttcagaaccatg 226 |||||||||||||||||||| Sbjct: 653 gttggaggttcagaaccatg 634 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,645,248 Number of Sequences: 3902068 Number of extensions: 5645248 Number of successful extensions: 100113 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99730 Number of HSP's gapped (non-prelim): 356 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)