ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags6l01 |
|---|---|
| Clone Library Name | barley_pub |
>HSP21_MAIZE (P24631) 17.5 kDa class II heat shock protein| Length = 161 Score = 37.4 bits (85), Expect(2) = 6e-07 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = +2 Query: 59 PTTPTRXKISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQVA 181 P KISAVCRDGVLTVTV+ TI+V+VA Sbjct: 121 PDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 161 Score = 33.5 bits (75), Expect(2) = 6e-07 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNAD 72 RRMGK RKFV+PDNAD Sbjct: 109 RRMGKFMRKFVLPDNAD 125
>HSP22_MAIZE (P24632) 17.8 kDa class II heat shock protein| Length = 164 Score = 35.0 bits (79), Expect(2) = 3e-06 Identities = 18/34 (52%), Positives = 23/34 (67%) Frame = +2 Query: 80 KISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQVA 181 K++AVCRDGVLTVTV+ TI+V+VA Sbjct: 131 KVAAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 164 Score = 33.5 bits (75), Expect(2) = 3e-06 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNAD 72 RRMGK RKFV+PDNAD Sbjct: 112 RRMGKFMRKFVLPDNAD 128
>HSP23_MAIZE (Q08275) 17.0 kDa class II heat shock protein (HSP 18)| Length = 154 Score = 34.7 bits (78), Expect(2) = 4e-06 Identities = 17/34 (50%), Positives = 23/34 (67%) Frame = +2 Query: 80 KISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQVA 181 K++AVCRDGVLTVTV+ TI+++VA Sbjct: 121 KVAAVCRDGVLTVTVEKLPPPEPKKPKTIEIKVA 154 Score = 33.5 bits (75), Expect(2) = 4e-06 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNAD 72 RRMGK RKFV+PDNAD Sbjct: 102 RRMGKFMRKFVLPDNAD 118
>HSP21_HELAN (P46516) 17.9 kDa class II heat shock protein| Length = 160 Score = 38.1 bits (87), Expect(2) = 2e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = +2 Query: 59 PTTPTRXKISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQVA 181 P KISA+C+DGVLTVTV+ TIQVQVA Sbjct: 120 PEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160 Score = 27.3 bits (59), Expect(2) = 2e-05 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNADT 75 RRMGK +KF +P++A+T Sbjct: 108 RRMGKFMKKFALPEDANT 125
>HSP21_SOYBN (P05477) 17.9 kDa class II heat shock protein| Length = 159 Score = 32.7 bits (73), Expect(2) = 4e-05 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = +2 Query: 59 PTTPTRXKISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQVA 181 P ISAVC+DGVL+VTV TIQV+VA Sbjct: 119 PENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA 159 Score = 32.0 bits (71), Expect(2) = 4e-05 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNADT 75 RR+GKL RKFV+P+NA+T Sbjct: 107 RRVGKLMRKFVLPENANT 124
>HSP21_ARATH (P29830) 17.6 kDa class II heat shock protein| Length = 155 Score = 34.7 bits (78), Expect(2) = 5e-05 Identities = 21/41 (51%), Positives = 21/41 (51%) Frame = +2 Query: 59 PTTPTRXKISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQVA 181 P KISAVC DGVL VTV TIQVQVA Sbjct: 115 PENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155 Score = 29.6 bits (65), Expect(2) = 5e-05 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNAD 72 RRMGK RKF +P+NAD Sbjct: 103 RRMGKFMRKFQLPENAD 119
>HSP21_IPONI (Q01544) 17.2 kDa class II heat shock protein| Length = 155 Score = 34.3 bits (77), Expect(2) = 5e-05 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +2 Query: 59 PTTPTRXKISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQV 178 P + KI+AVC+DGVLTVTV+ TI+V++ Sbjct: 115 PENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154 Score = 30.0 bits (66), Expect(2) = 5e-05 Identities = 12/17 (70%), Positives = 16/17 (94%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNAD 72 RR+GKL RKFV+P+NA+ Sbjct: 103 RRVGKLMRKFVLPENAN 119
>HSP21_PEA (P19242) 17.1 kDa class II heat shock protein| Length = 152 Score = 30.0 bits (66), Expect(2) = 0.001 Identities = 12/17 (70%), Positives = 16/17 (94%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNAD 72 RR+GKL RKFV+P+NA+ Sbjct: 100 RRIGKLMRKFVLPENAN 116 Score = 29.6 bits (65), Expect(2) = 0.001 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = +2 Query: 83 ISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQVA 181 ISA+ +DGVLTVTV+ TIQV+VA Sbjct: 120 ISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152
>HSP22_IPONI (Q01545) 18.8 kDa class II heat shock protein| Length = 167 Score = 28.5 bits (62), Expect(2) = 0.063 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +1 Query: 22 RRMGKLXRKFVVPDNAD 72 RR+GK RKFV+P+NA+ Sbjct: 115 RRVGKFMRKFVLPENAN 131 Score = 25.0 bits (53), Expect(2) = 0.063 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +2 Query: 83 ISAVCRDGVLTVTVDXXXXXXXXXXXTIQVQVA 181 I+AV +DGVL VTV+ T++V+VA Sbjct: 135 INAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167
>YKKB_CAEEL (P61228) Hypothetical protein C02F5.13| Length = 210 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -2 Query: 82 LLPCRRCRGPRTCAXACPC 26 +LPC C GPRT + PC Sbjct: 120 VLPCIECHGPRTFTKSTPC 138
>HDRA_METJA (P60200) CoB--CoM heterodisulfide reductase iron-sulfur subunit A| (EC 1.8.98.1) Length = 657 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -2 Query: 64 CRGPRTCAXACPCGAXXRRY 5 C+G +CA ACP GA RY Sbjct: 616 CKGCGSCAGACPSGAMQLRY 635
>HDRA1_METKA (Q8TYP4) CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1| (EC 1.8.98.1) Length = 669 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -2 Query: 64 CRGPRTCAXACPCGAXXRRY 5 C+G CA ACP GA RY Sbjct: 626 CQGCGQCAAACPSGAMQLRY 645
>HDRA2_METKA (P96801) CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2| (EC 1.8.98.1) Length = 656 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -2 Query: 64 CRGPRTCAXACPCGAXXRRY 5 C+G TCA ACP GA + + Sbjct: 619 CKGCGTCAAACPSGAMEQNH 638
>CBIO1_STRCO (Q9KXJ6) Putative cobalt import ATP-binding protein cbiO 1| Length = 563 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -2 Query: 298 RISGNSLPNHRSDDHYPLSFDPACRQRTSLW 206 R++G +P+H PL PA R TS W Sbjct: 269 RLAGREIPDHTPPPSAPLPAPPAPRPVTSRW 299
>TAGAP_MOUSE (Q8K2L9) T-cell activation Rho GTPase-activating protein (T-cell| activation GTPase-activating protein) Length = 714 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -1 Query: 293 LRKLTP*SSIRRSLPTQLRSGVQAKDLSLVRSSNPSLRRP 174 +RKL+P S SL +L+ + + LS++ N +L RP Sbjct: 64 MRKLSPSSDFSGSLEPELKVSLFDQPLSIICGENDTLPRP 103
>IP3KC_RAT (Q80ZG2) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase C) (IP3K-C) Length = 678 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 257 SLPTQLRSGVQAKDLSLVRSSNPSLRRPGPG 165 +LP + R G++A L R P L+RPGPG Sbjct: 17 ALPAEARMGLEA--LRGGRRRQPGLQRPGPG 45
>IP3KC_MOUSE (Q7TS72) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase C) (IP3K-C) Length = 678 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 257 SLPTQLRSGVQAKDLSLVRSSNPSLRRPGPG 165 +LP + R G++A L R P L+RPGPG Sbjct: 17 ALPAEARMGLEA--LRGGRRRQPGLQRPGPG 45
>MCRA_METBF (P07962) Methyl-coenzyme M reductase alpha subunit (EC 2.8.4.1)| (Coenzyme-B sulfoethylthiotransferase alpha) Length = 569 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -2 Query: 112 EHAVAANGGDLLPCRRCRGP 53 +HA + G++LP RR RGP Sbjct: 269 KHAALVSMGEMLPARRARGP 288 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,434,552 Number of Sequences: 219361 Number of extensions: 666353 Number of successful extensions: 2018 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1945 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2017 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
