Clone Name	bags6k12
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-tra...	226	1e-56
2	ref|XM_483423.1| Oryza sativa (japonica cultivar-group), mRNA	149	3e-33
3	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	149	3e-33
4	dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D...	149	3e-33
5	dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clon...	149	3e-33
6	gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete se...	113	1e-22
7	gb|AY104504.1| Zea mays PCO127462 mRNA sequence	109	2e-21
8	ref|NM_124233.2| Arabidopsis thaliana FK506 binding / calmodulin...	64	1e-07
9	emb|BX831626.1|CNS0A0YB Arabidopsis thaliana Full-length cDNA Co...	64	1e-07
10	dbj|AB015468.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	64	1e-07
11	gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence	56	3e-05
12	ref|NM_113429.3| Arabidopsis thaliana ROF1 (ROTAMASE FKBP 1); FK...	54	1e-04
13	dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	54	1e-04
14	gb|U57838.1|ATU57838 Arabidopsis thaliana FK506 binding protein ...	54	1e-04
15	gb|U49453.1|ATU49453 Arabidopsis thaliana FK506 binding protein ...	54	1e-04
16	gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete s...	44	0.11
17	gb|AC092265.3| Homo sapiens chromosome 1 clone RP4-656G21, compl...	42	0.43
18	emb|AL034412.2|HS99M1 Human DNA sequence from clone RP6-99M1 on ...	42	0.43
19	emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chr...	42	0.43
20	gb|AC016398.6| Homo sapiens chromosome 10 clone RP11-561G1, comp...	42	0.43
21	emb|Z74022.1|HSU90B3 Human DNA sequence from clone LL0XNC01-90B3...	42	0.43
22	gb|AC154052.1| Drosophila melanogaster clone BACR01B21, complete...	40	1.7
23	gb|BT016073.1| Drosophila melanogaster LP05312 full insert cDNA	40	1.7
24	gb|AC139107.3| Mus musculus BAC clone RP23-430L2 from chromosome...	40	1.7
25	emb|AJ252085.1|DME252085 Drosophila melanogaster Imp-a1 gene for...	40	1.7
26	ref|NM_079443.1| Drosophila melanogaster karyopherin 1 CG8548-RA...	40	1.7
27	gb|AC115748.8| Mus musculus chromosome 1, clone RP23-13N24, comp...	40	1.7
28	ref|XM_342179.2| PREDICTED: Rattus norvegicus Rho-guanine nucleo...	40	1.7
29	gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70...	40	1.7
30	gb|AF074957.1|AF074957 Drosophila melanogaster karyopherin alpha...	40	1.7
31	ref|XM_465763.1| Oryza sativa (japonica cultivar-group), mRNA	38	6.7
32	ref|NM_189404.1| Oryza sativa (japonica cultivar-group), predic...	38	6.7
33	ref|NM_198841.1| Homo sapiens chromosome 9 open reading frame 10...	38	6.7
34	gb|BC037551.1| Homo sapiens chromosome 9 open reading frame 10 o...	38	6.7
35	gb|BC046183.1| Homo sapiens chromosome 9 open reading frame 10 o...	38	6.7
36	gb|BC038803.1| Homo sapiens chromosome 9 open reading frame 10 o...	38	6.7
37	gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, co...	38	6.7
38	gb|BC107136.1| Homo sapiens chromosome 9 open reading frame 10 o...	38	6.7
39	gb|BC107135.1| Homo sapiens chromosome 9 open reading frame 10 o...	38	6.7
40	gb|BC080634.1| Homo sapiens chromosome 9 open reading frame 10 o...	38	6.7
41	gb|BC063650.1| Homo sapiens chromosome 9 open reading frame 10 o...	38	6.7
42	emb|AL583839.12| Human DNA sequence from clone RP11-165J3 on chr...	38	6.7
43	emb|AL353629.22| Human DNA sequence from clone RP11-30L4 on chro...	38	6.7
44	emb|AJ578026.1|BFI578026 Butyrivibrio fibrisolvens amyA gene for...	38	6.7
45	emb|BX323870.13| Zebrafish DNA sequence from clone DKEYP-70G1 in...	38	6.7
46	gb|AC008385.7| Homo sapiens chromosome 5 clone CTC-224D3, comple...	38	6.7
47	emb|CR602701.1| full-length cDNA clone CS0DI063YN04 of Placenta ...	38	6.7
48	dbj|AK056096.1| Homo sapiens cDNA FLJ31534 fis, clone NT2RI2000671	38	6.7
49	emb|CR593923.1| full-length cDNA clone CS0DM006YB16 of Fetal liv...	38	6.7
50	gb|CP000133.1| Rhizobium etli CFN 42, complete genome	38	6.7
51	gb|AC055731.22| Homo sapiens 3 BAC RP11-588D3 (Roswell Park Canc...	38	6.7
52	emb|BX255915.13| Zebrafish DNA sequence from clone CH211-245L1 i...	38	6.7
53	emb|BX323563.10| Zebrafish DNA sequence from clone DKEY-20J10 in...	38	6.7
54	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	38	6.7
55	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	38	6.7
56	dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D...	38	6.7
57	dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic D...	38	6.7
58	dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic D...	38	6.7
59	dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clon...	38	6.7
60	dbj|AK058564.1| Oryza sativa (japonica cultivar-group) cDNA clon...	38	6.7
61	emb|CR548630.7| Zebrafish DNA sequence from clone CH211-232B12 i...	38	6.7
62	dbj|AP002023.1| Homo sapiens genomic DNA, chromosome 4q22-q24, c...	38	6.7
63	dbj|AP002022.1| Homo sapiens genomic DNA, chromosome 4q22-q24, c...	38	6.7

---

>emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-trans isomerase, FK506
          Length = 2027

 Score =  226 bits (114), Expect = 1e-56
 Identities = 126/131 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
           ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 426 gaaaggggaaaatgctcttttcaccattcctcctgaattggcttatggcgaatctggttc 485

                                                                       
Query: 61  acctccaactattccggccaatgccacgctgcagttcgatgttnnnctgctttcttggac 120
           |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||
Sbjct: 486 acctccaactattccggccaatgccacgctgcagttcgatgttgagctgctttcttggac 545

                      
Query: 121 cagtgtcaggg 131
           |||||||||||
Sbjct: 546 cagtgtcaggg 556

---

>ref|XM_483423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2100

 Score =  149 bits (75), Expect = 3e-33
 Identities = 114/128 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
           |||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 443 gaaaggcgaaaatgctgttttcaccattcctcctgatttggcctatggtgaatctggttc 502

                                                                       
Query: 61  acctccaactattccggccaatgccacgctgcagttcgatgttnnnctgctttcttggac 120
           ||||||||||||||| |||| |||||| |||||||| ||||||    |||||||||||||
Sbjct: 503 acctccaactattccagccagtgccacactgcagtttgatgttgagttgctttcttggac 562

                   
Query: 121 cagtgtca 128
            |||||||
Sbjct: 563 aagtgtca 570

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  149 bits (75), Expect = 3e-33
 Identities = 114/128 (89%)
 Strand = Plus / Plus

                                                                            
Query: 1        gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
                |||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 26133162 gaaaggcgaaaatgctgttttcaccattcctcctgatttggcctatggtgaatctggttc 26133221

                                                                            
Query: 61       acctccaactattccggccaatgccacgctgcagttcgatgttnnnctgctttcttggac 120
                ||||||||||||||| |||| |||||| |||||||| ||||||    |||||||||||||
Sbjct: 26133222 acctccaactattccagccagtgccacactgcagtttgatgttgagttgctttcttggac 26133281

                        
Query: 121      cagtgtca 128
                 |||||||
Sbjct: 26133282 aagtgtca 26133289

---

>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score =  149 bits (75), Expect = 3e-33
 Identities = 114/128 (89%)
 Strand = Plus / Plus

                                                                         
Query: 1     gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
             |||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 77093 gaaaggcgaaaatgctgttttcaccattcctcctgatttggcctatggtgaatctggttc 77152

                                                                         
Query: 61    acctccaactattccggccaatgccacgctgcagttcgatgttnnnctgctttcttggac 120
             ||||||||||||||| |||| |||||| |||||||| ||||||    |||||||||||||
Sbjct: 77153 acctccaactattccagccagtgccacactgcagtttgatgttgagttgctttcttggac 77212

                     
Query: 121   cagtgtca 128
              |||||||
Sbjct: 77213 aagtgtca 77220

---

>dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121G16, full
           insert sequence
          Length = 2100

 Score =  149 bits (75), Expect = 3e-33
 Identities = 114/128 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
           |||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 443 gaaaggcgaaaatgctgttttcaccattcctcctgatttggcctatggtgaatctggttc 502

                                                                       
Query: 61  acctccaactattccggccaatgccacgctgcagttcgatgttnnnctgctttcttggac 120
           ||||||||||||||| |||| |||||| |||||||| ||||||    |||||||||||||
Sbjct: 503 acctccaactattccagccagtgccacactgcagtttgatgttgagttgctttcttggac 562

                   
Query: 121 cagtgtca 128
            |||||||
Sbjct: 563 aagtgtca 570

---

>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence
          Length = 137052

 Score =  113 bits (57), Expect = 1e-22
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1     gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
             |||||| |||||||| |||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 40458 gaaaggtgaaaatgctcttttcaccattccacctgagttagcttatggtgaatctggttc 40517

                                                                         
Query: 61    acctccaactattccggccaatgccacgctgcagttcgatgttnnnctgctttcttggac 120
              ||||||||||||||  | ||||| || ||||| || ||||||   ||||| ||||||||
Sbjct: 40518 tcctccaactattcctcctaatgctactctgcaatttgatgttgagctgctgtcttggac 40577

                   
Query: 121   cagtgt 126
              |||||
Sbjct: 40578 tagtgt 40583

---

>gb|AY104504.1| Zea mays PCO127462 mRNA sequence
          Length = 2108

 Score =  109 bits (55), Expect = 2e-21
 Identities = 109/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
           |||||| ||||||||  |||| ||||||||||| ||  |||||||||| | |||||||||
Sbjct: 473 gaaaggagaaaatgctatttttaccattcctccagagctggcttatggagcatctggttc 532

                                                                       
Query: 61  acctccaactattccggccaatgccacgctgcagttcgatgttnnnctgctttcttggac 120
           |||||||||||| ||  ||||||| || |||||||| ||||||   |||||||| |||||
Sbjct: 533 acctccaactatcccacccaatgcaaccctgcagtttgatgttgagctgctttcatggac 592

                   
Query: 121 cagtgtca 128
           ||||||||
Sbjct: 593 cagtgtca 600

---

>ref|NM_124233.2| Arabidopsis thaliana FK506 binding / calmodulin binding /
           peptidyl-prolyl cis-trans isomerase AT5G48570 mRNA,
           complete cds
          Length = 2130

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
           |||||| ||||||||  |||||||||||||||||||  |||| ||||||||| | |||||
Sbjct: 528 gaaaggtgaaaatgctattttcaccattcctcctgagctggcatatggtgaaaccggttc 587

                       
Query: 61  acctccaactat 72
           ||| || |||||
Sbjct: 588 accgccgactat 599

---

>emb|BX831626.1|CNS0A0YB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH1ZC07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1890

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
           |||||| ||||||||  |||||||||||||||||||  |||| ||||||||| | |||||
Sbjct: 398 gaaaggtgaaaatgctattttcaccattcctcctgagctggcatatggtgaaaccggttc 457

                       
Query: 61  acctccaactat 72
           ||| || |||||
Sbjct: 458 accgccgactat 469

---

>dbj|AB015468.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15N18
          Length = 66084

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1     gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
             |||||| ||||||||  |||||||||||||||||||  |||| ||||||||| | |||||
Sbjct: 14137 gaaaggtgaaaatgctattttcaccattcctcctgagctggcatatggtgaaaccggttc 14078

                         
Query: 61    acctccaactat 72
             ||| || |||||
Sbjct: 14077 accgccgactat 14066

---

>gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence
          Length = 2264

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggttc 60
           |||||| ||||||||  |||||||||||||||||||  ||||||| || ||   ||||||
Sbjct: 521 gaaaggtgaaaatgctattttcaccattcctcctgagctggcttacggagagagtggttc 580

                       
Query: 61  acctccaactat 72
            |||||||||||
Sbjct: 581 tcctccaactat 592

---

>ref|NM_113429.3| Arabidopsis thaliana ROF1 (ROTAMASE FKBP 1); FK506 binding /
           calmodulin binding / peptidyl-prolyl cis-trans isomerase
           AT3G25230 (ROF1) mRNA, complete cds
          Length = 1974

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 44  tatggtgaatctggttcacctccaactattccggccaatgccacgctgcagttcgatgt 102
           ||||| ||||||||||| || ||||||||||| || ||||| ||||| ||||| |||||
Sbjct: 408 tatggggaatctggttccccgccaactattcctgcgaatgctacgcttcagtttgatgt 466

---

>dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12
          Length = 81542

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 44    tatggtgaatctggttcacctccaactattccggccaatgccacgctgcagttcgatgt 102
             ||||| ||||||||||| || ||||||||||| || ||||| ||||| ||||| |||||
Sbjct: 57802 tatggggaatctggttccccgccaactattcctgcgaatgctacgcttcagtttgatgt 57860

---

>gb|U57838.1|ATU57838 Arabidopsis thaliana FK506 binding protein FKBP62 (ROF1) gene,
            complete cds
          Length = 4029

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 44   tatggtgaatctggttcacctccaactattccggccaatgccacgctgcagttcgatgt 102
            ||||| ||||||||||| || ||||||||||| || ||||| ||||| ||||| |||||
Sbjct: 1116 tatggggaatctggttccccgccaactattcctgcgaatgctacgcttcagtttgatgt 1174

---

>gb|U49453.1|ATU49453 Arabidopsis thaliana FK506 binding protein FKBP62 (ROF1) mRNA,
           complete cds
          Length = 1934

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 44  tatggtgaatctggttcacctccaactattccggccaatgccacgctgcagttcgatgt 102
           ||||| ||||||||||| || ||||||||||| || ||||| ||||| ||||| |||||
Sbjct: 359 tatggggaatctggttccccgccaactattcctgcgaatgctacgcttcagtttgatgt 417

---

>gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete sequence
          Length = 128458

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2      aaaggggaaaatgcccttttcaccattcctcctgaattggcttatggtgaatctggtt 59
              ||||| ||||| ||||||||||||||||| || || || |||| || | |||||||||
Sbjct: 126305 aaaggtgaaaaggcccttttcaccattccacccgagttagcttgtgataaatctggtt 126362

---

>gb|AC092265.3| Homo sapiens chromosome 1 clone RP4-656G21, complete sequence
          Length = 129231

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    tgcccttttcaccattcctcc 33
             |||||||||||||||||||||
Sbjct: 32689 tgcccttttcaccattcctcc 32709

---

>emb|AL034412.2|HS99M1 Human DNA sequence from clone RP6-99M1 on chromosome Xp11.1-11.4
             Contains a novel pseudogene (GL004), complete sequence
          Length = 107049

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 7     ggaaaatgcccttttcaccattcct 31
             |||||||||||||||| ||||||||
Sbjct: 59634 ggaaaatgcccttttctccattcct 59610

---

>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the
             genes for H2b histone family member A, two H2a, two H4 and
             an H2b histone family member, a serine/threonine protein
             kinase pseudogene, a novel pseudogene, a novel gene
             (4930500C15Rik), the gene for a novel KRAB box and C2H2
             Zinc Finger containing protein, a ribosomal protein L21
             (RPL21) pseudogene, a TU mitochondrial translation
             elongation factor (tufa) pseudogene, the 5' end of the
             gene for a novel protein similar to nuclear envelope pore
             membrane protein POM121 and four CpG islands, complete
             sequence
          Length = 182817

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    tctggttcacctccaactatt 73
             |||||||||||||||||||||
Sbjct: 71654 tctggttcacctccaactatt 71674

---

>gb|AC016398.6| Homo sapiens chromosome 10 clone RP11-561G1, complete sequence
          Length = 158817

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    cccttttcaccattcctcctg 35
             |||||||||||||||||||||
Sbjct: 16480 cccttttcaccattcctcctg 16500

---

>emb|Z74022.1|HSU90B3 Human DNA sequence from clone LL0XNC01-90B3 on chromosome Xp11,
           complete sequence
          Length = 35609

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 7   ggaaaatgcccttttcaccattcct 31
           |||||||||||||||| ||||||||
Sbjct: 136 ggaaaatgcccttttctccattcct 160

---

>gb|AC154052.1| Drosophila melanogaster clone BACR01B21, complete sequence
          Length = 167163

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    aatgccacgctgcagttcga 99
             ||||||||||||||||||||
Sbjct: 77212 aatgccacgctgcagttcga 77193

---

>gb|BT016073.1| Drosophila melanogaster LP05312 full insert cDNA
          Length = 2327

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  aatgccacgctgcagttcga 99
           ||||||||||||||||||||
Sbjct: 551 aatgccacgctgcagttcga 570

---

>gb|AC139107.3| Mus musculus BAC clone RP23-430L2 from chromosome 8, complete sequence
          Length = 192627

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aaggggaaaatgcccttttc 22
              ||||||||||||||||||||
Sbjct: 111637 aaggggaaaatgcccttttc 111656

---

>emb|AJ252085.1|DME252085 Drosophila melanogaster Imp-a1 gene for Importin-alpha1, exons 1-6
          Length = 3480

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aatgccacgctgcagttcga 99
            ||||||||||||||||||||
Sbjct: 1353 aatgccacgctgcagttcga 1372

---

>ref|NM_079443.1| Drosophila melanogaster karyopherin 1 CG8548-RA (Kap-alpha1), mRNA
          Length = 2307

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  aatgccacgctgcagttcga 99
           ||||||||||||||||||||
Sbjct: 548 aatgccacgctgcagttcga 567

---

>gb|AC115748.8| Mus musculus chromosome 1, clone RP23-13N24, complete sequence
          Length = 202092

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      aaaatgcccttttcaccatt 28
              ||||||||||||||||||||
Sbjct: 127725 aaaatgcccttttcaccatt 127744

---

>ref|XM_342179.2| PREDICTED: Rattus norvegicus Rho-guanine nucleotide exchange factor
            (predicted) (Rgnef_predicted), mRNA
          Length = 8097

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   atgccacgctgcagttcgat 100
            ||||||||||||||||||||
Sbjct: 2459 atgccacgctgcagttcgat 2478

---

>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete
             sequence
          Length = 234263

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    aatgccacgctgcagttcga 99
             ||||||||||||||||||||
Sbjct: 14779 aatgccacgctgcagttcga 14798

---

>gb|AF074957.1|AF074957 Drosophila melanogaster karyopherin alpha 1 mRNA, partial cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  aatgccacgctgcagttcga 99
           ||||||||||||||||||||
Sbjct: 451 aatgccacgctgcagttcga 470

---

>ref|XM_465763.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2341

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 80  aatgccacgctgcagttcgatgt 102
           ||||||||||||||||| |||||
Sbjct: 629 aatgccacgctgcagtttgatgt 651

---

>ref|NM_189404.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 594

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  ccggccaatgccacgctgc 92
           |||||||||||||||||||
Sbjct: 194 ccggccaatgccacgctgc 212

---

>ref|NM_198841.1| Homo sapiens chromosome 9 open reading frame 10 opposite strand
            (C9orf10OS), mRNA
          Length = 2764

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 6    gggaaaatgcccttttcaccattcctc 32
            |||||||||| || |||||||||||||
Sbjct: 1722 gggaaaatgctctattcaccattcctc 1748

---

>gb|BC037551.1| Homo sapiens chromosome 9 open reading frame 10 opposite strand,
           mRNA (cDNA clone IMAGE:5214118), partial cds
          Length = 1770

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 686 gggaaaatgctctattcaccattcctc 712

---

>gb|BC046183.1| Homo sapiens chromosome 9 open reading frame 10 opposite strand,
           mRNA (cDNA clone IMAGE:5226128), partial cds
          Length = 1822

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 753 gggaaaatgctctattcaccattcctc 779

---

>gb|BC038803.1| Homo sapiens chromosome 9 open reading frame 10 opposite strand,
           mRNA (cDNA clone IMAGE:5526893), partial cds
          Length = 1923

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 866 gggaaaatgctctattcaccattcctc 892

---

>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence
          Length = 216331

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 1     gaaaggggaaaatgcccttttca 23
             |||||||||||||||| ||||||
Sbjct: 49347 gaaaggggaaaatgccattttca 49325

---

>gb|BC107136.1| Homo sapiens chromosome 9 open reading frame 10 opposite strand,
           mRNA (cDNA clone IMAGE:40025901)
          Length = 1432

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 794 gggaaaatgctctattcaccattcctc 820

---

>gb|BC107135.1| Homo sapiens chromosome 9 open reading frame 10 opposite strand,
           mRNA (cDNA clone IMAGE:40025893)
          Length = 1553

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 915 gggaaaatgctctattcaccattcctc 941

---

>gb|BC080634.1| Homo sapiens chromosome 9 open reading frame 10 opposite strand,
           mRNA (cDNA clone IMAGE:6563304)
          Length = 1844

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 784 gggaaaatgctctattcaccattcctc 810

---

>gb|BC063650.1| Homo sapiens chromosome 9 open reading frame 10 opposite strand,
           mRNA (cDNA clone IMAGE:4803436)
          Length = 1751

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 686 gggaaaatgctctattcaccattcctc 712

---

>emb|AL583839.12| Human DNA sequence from clone RP11-165J3 on chromosome 9 Contains the 3'
              end of the PRKWNK2 gene for protein kinase, lysine
              deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13), three
              novel genes, the 3' end of a novel gene and a CpG island,
              complete sequence
          Length = 140718

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 6      gggaaaatgcccttttcaccattcctc 32
              |||||||||| || |||||||||||||
Sbjct: 139799 gggaaaatgctctattcaccattcctc 139773

---

>emb|AL353629.22| Human DNA sequence from clone RP11-30L4 on chromosome 9q22.1-22.33
            Contains the 5' end of a novel gene, two novel genes, the
            C9orf10 gene for chromosome 9 open reading frame 10, the
            5' end of the PHF2 gene for PHD finger protein 2 and
            three CpG islands, complete sequence
          Length = 170845

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 6    gggaaaatgcccttttcaccattcctc 32
            |||||||||| || |||||||||||||
Sbjct: 1081 gggaaaatgctctattcaccattcctc 1055

---

>emb|AJ578026.1|BFI578026 Butyrivibrio fibrisolvens amyA gene for putative alpha-amylase
          Length = 4214

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 27   ttcctcctgaattggctta 45
            |||||||||||||||||||
Sbjct: 3026 ttcctcctgaattggctta 3008

---

>emb|BX323870.13| Zebrafish DNA sequence from clone DKEYP-70G1 in linkage group 5, complete
              sequence
          Length = 187646

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 61     acctccaactattccggccaatg 83
              |||||||||||||||||| ||||
Sbjct: 109111 acctccaactattccggcaaatg 109133

---

>gb|AC008385.7| Homo sapiens chromosome 5 clone CTC-224D3, complete sequence
          Length = 151712

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     aaaatgcccttttcaccat 27
             |||||||||||||||||||
Sbjct: 19429 aaaatgcccttttcaccat 19447

---

>emb|CR602701.1| full-length cDNA clone CS0DI063YN04 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1846

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 836 gggaaaatgctctattcaccattcctc 862

---

>dbj|AK056096.1| Homo sapiens cDNA FLJ31534 fis, clone NT2RI2000671
          Length = 2764

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 6    gggaaaatgcccttttcaccattcctc 32
            |||||||||| || |||||||||||||
Sbjct: 1722 gggaaaatgctctattcaccattcctc 1748

---

>emb|CR593923.1| full-length cDNA clone CS0DM006YB16 of Fetal liver of Homo sapiens
           (human)
          Length = 1735

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   gggaaaatgcccttttcaccattcctc 32
           |||||||||| || |||||||||||||
Sbjct: 717 gggaaaatgctctattcaccattcctc 743

---

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 75      cggccaatgccacgctgca 93
               |||||||||||||||||||
Sbjct: 2595109 cggccaatgccacgctgca 2595091

---

>gb|AC055731.22| Homo sapiens 3 BAC RP11-588D3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152537

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 2      aaaggggaaaatgcccttttcac 24
              ||||||||||| |||||||||||
Sbjct: 141914 aaaggggaaaaagcccttttcac 141892

---

>emb|BX255915.13| Zebrafish DNA sequence from clone CH211-245L1 in linkage group 5,
              complete sequence
          Length = 157382

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     ccaactattccggccaatg 83
              |||||||||||||||||||
Sbjct: 144914 ccaactattccggccaatg 144896

---

>emb|BX323563.10| Zebrafish DNA sequence from clone DKEY-20J10 in linkage group 5,
             complete sequence
          Length = 97393

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    acctccaactattccggccaatg 83
             |||||||||||||||||| ||||
Sbjct: 24616 acctccaactattccggcaaatg 24594

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 80       aatgccacgctgcagttcgatgt 102
                ||||||||||||||||| |||||
Sbjct: 17259079 aatgccacgctgcagtttgatgt 17259057

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 74       ccggccaatgccacgctgc 92
                |||||||||||||||||||
Sbjct: 42606667 ccggccaatgccacgctgc 42606649

---

>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 74     ccggccaatgccacgctgc 92
              |||||||||||||||||||
Sbjct: 127550 ccggccaatgccacgctgc 127532

---

>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0579G08
          Length = 164452

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 80    aatgccacgctgcagttcgatgt 102
             ||||||||||||||||| |||||
Sbjct: 31762 aatgccacgctgcagtttgatgt 31740

---

>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0048K16
          Length = 159891

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 80     aatgccacgctgcagttcgatgt 102
              ||||||||||||||||| |||||
Sbjct: 129846 aatgccacgctgcagtttgatgt 129824

---

>dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H01, full
           insert sequence
          Length = 2341

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 80  aatgccacgctgcagttcgatgt 102
           ||||||||||||||||| |||||
Sbjct: 629 aatgccacgctgcagtttgatgt 651

---

>dbj|AK058564.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E01, full
           insert sequence
          Length = 741

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  ccggccaatgccacgctgc 92
           |||||||||||||||||||
Sbjct: 220 ccggccaatgccacgctgc 238

---

>emb|CR548630.7| Zebrafish DNA sequence from clone CH211-232B12 in linkage group 11,
              complete sequence
          Length = 117408

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 61     acctccaactattccggcc 79
              |||||||||||||||||||
Sbjct: 103370 acctccaactattccggcc 103388

---

>dbj|AP002023.1| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2006D20, complete
             sequence
          Length = 126253

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    ccttttcaccattcctcct 34
             |||||||||||||||||||
Sbjct: 92568 ccttttcaccattcctcct 92586

---

>dbj|AP002022.1| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2198J12, complete
              sequence
          Length = 173933

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     ccttttcaccattcctcct 34
              |||||||||||||||||||
Sbjct: 123217 ccttttcaccattcctcct 123199


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,032,418
Number of Sequences: 3902068
Number of extensions: 1032418
Number of successful extensions: 72732
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72547
Number of HSP's gapped (non-prelim): 185
length of query: 140
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 119
effective length of database: 17,151,101,840
effective search space: 2040981118960
effective search space used: 2040981118960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)

---