ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6k03 |
|---|---|
| Clone Library Name | barley_pub |
>PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) Length = 308 Score = 327 bits (837), Expect = 2e-89 Identities = 160/173 (92%), Positives = 166/173 (95%) Frame = +1 Query: 55 MGQPGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFA 234 +G DSP LD+SEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRVVDVFA Sbjct: 14 LGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFA 73 Query: 235 MPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 414 MPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE Sbjct: 74 MPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 133 Query: 415 ALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNKP 573 ALN RAVAVV+DPIQSVKGKVVIDAFR INPQT+MLGQEPRQTTSN+GHLNKP Sbjct: 134 ALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKP 186
>PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (MAD1) Length = 310 Score = 309 bits (792), Expect = 3e-84 Identities = 153/174 (87%), Positives = 163/174 (93%), Gaps = 1/174 (0%) Frame = +1 Query: 55 MGQ-PGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVF 231 +GQ P TD+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRV+DVF Sbjct: 14 LGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVF 73 Query: 232 AMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSF 411 AMPQSGTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSF Sbjct: 74 AMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSF 133 Query: 412 EALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNKP 573 EAL+ RAVAVV+DPIQSVKGKVVIDAFRLIN M+LG EPRQTTSN+GHLNKP Sbjct: 134 EALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKP 187
>PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (26S proteasome-associated PAD1 homolog 1) Length = 310 Score = 309 bits (792), Expect = 3e-84 Identities = 153/174 (87%), Positives = 163/174 (93%), Gaps = 1/174 (0%) Frame = +1 Query: 55 MGQ-PGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVF 231 +GQ P TD+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRV+DVF Sbjct: 14 LGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVF 73 Query: 232 AMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSF 411 AMPQSGTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSF Sbjct: 74 AMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSF 133 Query: 412 EALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNKP 573 EAL+ RAVAVV+DPIQSVKGKVVIDAFRLIN M+LG EPRQTTSN+GHLNKP Sbjct: 134 EALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKP 187
>PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (26S proteasome regulatory complex subunit p37B) (Yippee-interacting protein 5) Length = 308 Score = 308 bits (790), Expect = 5e-84 Identities = 149/170 (87%), Positives = 162/170 (95%) Frame = +1 Query: 64 PGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQ 243 P TD+P++D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTV+V+DVFAMPQ Sbjct: 16 PPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQ 75 Query: 244 SGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALN 423 +GTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ Sbjct: 76 TGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 135 Query: 424 PRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNKP 573 RAVAVV+DPIQSVKGKVVIDAFRLINP ++LGQEPRQTTSN+GHL KP Sbjct: 136 ERAVAVVVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKP 185
>RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Protein pad1)| Length = 308 Score = 304 bits (779), Expect = 1e-82 Identities = 147/167 (88%), Positives = 157/167 (94%) Frame = +1 Query: 73 DSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGT 252 D PL+D+SE VYISSLALLKML+HGR G PMEVMGLMLGEFVDD+TVRVVDVFAMPQSGT Sbjct: 20 DQPLVDNSECVYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGT 79 Query: 253 GVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRA 432 GVSVEAVD VFQ NM+DMLKQTGRPEMVVGWYHSHPGFGCWLS VDINTQQSFE L PRA Sbjct: 80 GVSVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRA 139 Query: 433 VAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNKP 573 VAVV+DPIQSVKGKVVIDAFRLINP T+M+GQEPRQTTSN+GH+NKP Sbjct: 140 VAVVVDPIQSVKGKVVIDAFRLINPSTLMMGQEPRQTTSNLGHINKP 186
>PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) Length = 312 Score = 300 bits (767), Expect = 3e-81 Identities = 148/167 (88%), Positives = 155/167 (92%) Frame = +1 Query: 73 DSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGT 252 DS +D+SE VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTV V+DVFAMPQSGT Sbjct: 23 DSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGT 82 Query: 253 GVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRA 432 GVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ RA Sbjct: 83 GVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRA 142 Query: 433 VAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNKP 573 VAVV+DPIQSVKGKVVIDAFR INPQ+M L QEPRQTTSN+GHL KP Sbjct: 143 VAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKP 189
>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11| Length = 311 Score = 282 bits (722), Expect = 4e-76 Identities = 139/173 (80%), Positives = 153/173 (88%) Frame = +1 Query: 55 MGQPGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFA 234 +G T+ PL D+ E VYISSLALLKMLKH RAGVPMEVMGLMLG+FVD+YTV VVDVFA Sbjct: 16 IGAAATEMPLDDTKETVYISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVFA 75 Query: 235 MPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 414 MPQSGTGVSVEAVD VFQ M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD++TQ+SFE Sbjct: 76 MPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVDTQRSFE 135 Query: 415 ALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNKP 573 LN RAVAVV+DPIQSVKGKVVIDAFRLI+P T++ QEPRQTTSNVG LNKP Sbjct: 136 QLNSRAVAVVVDPIQSVKGKVVIDAFRLISPATVVRNQEPRQTTSNVGLLNKP 188
>RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MPR1 protein)| Length = 306 Score = 269 bits (688), Expect = 4e-72 Identities = 133/161 (82%), Positives = 143/161 (88%) Frame = +1 Query: 88 DSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVE 267 D+ E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFVDDYTV VVDVFAMPQSGTGVSVE Sbjct: 22 DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVE 81 Query: 268 AVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVI 447 AVD VFQ M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVV+ Sbjct: 82 AVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVV 141 Query: 448 DPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNK 570 DPIQSVKGKVVIDAFRLI+ ++ EPRQTTSN G LNK Sbjct: 142 DPIQSVKGKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNK 182
>RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11| Length = 306 Score = 268 bits (686), Expect = 6e-72 Identities = 132/161 (81%), Positives = 144/161 (89%) Frame = +1 Query: 88 DSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVE 267 D+ E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV VVDVFAMPQSGTGVSVE Sbjct: 22 DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVSVE 81 Query: 268 AVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVI 447 AVD VFQ M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVV+ Sbjct: 82 AVDDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVV 141 Query: 448 DPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNK 570 DPIQSVKGKVVIDAFRLI+ ++ QEPRQTTSN G +NK Sbjct: 142 DPIQSVKGKVVIDAFRLIDTGALINNQEPRQTTSNSGLMNK 182
>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III| Length = 319 Score = 249 bits (637), Expect = 3e-66 Identities = 120/167 (71%), Positives = 141/167 (84%), Gaps = 5/167 (2%) Frame = +1 Query: 88 DSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVE 267 D+SE V ISSLALLKML+H R+G+P+EVMGLMLG+FVDDYT+ V DVFAMPQSGT V+VE Sbjct: 24 DTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVE 83 Query: 268 AVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVI 447 +VD V+QT +D+LK GR E VVGWYHSHPGFGCWLS VD+NTQQSFEAL+PRAVAVV+ Sbjct: 84 SVDPVYQTKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVV 143 Query: 448 DPIQSVKGKVVIDAFRLINPQTMML-----GQEPRQTTSNVGHLNKP 573 DPIQSVKGKV++DAFR +NP + + EPRQTTSN+GHL KP Sbjct: 144 DPIQSVKGKVMLDAFRSVNPLNLQIRPLAPTAEPRQTTSNLGHLTKP 190
>CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (Dch5) (JAB1 homolog) Length = 327 Score = 131 bits (329), Expect = 2e-30 Identities = 66/136 (48%), Positives = 95/136 (69%), Gaps = 3/136 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEA 270 + + IS+LALLKM+ H R+G +EVMGLMLG+ V+D T+ V+D FA+P GT V+ +A Sbjct: 50 KDIKISALALLKMVMHARSGGTLEVMGLMLGK-VEDNTMIVMDAFALPVEGTETRVNAQA 108 Query: 271 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + + T ++ K+ GR E VGWYHSHPG+GCWLSG+D++TQ + VA+V+D Sbjct: 109 QAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVD 168 Query: 451 PIQSVK-GKVVIDAFR 495 P+++V GKV + AFR Sbjct: 169 PVRTVSAGKVCLGAFR 184
>CSN5_USTMA (Q4P804) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 406 Score = 126 bits (317), Expect = 4e-29 Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 4/137 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF-VDDYTVRVVDVFAMPQSGTGVSVEAV 273 ++V IS++AL+KM+ H R+G E+MGLM G+ V++ T+ V+D FA+P GT V A Sbjct: 59 QKVRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQ 118 Query: 274 DHVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVI 447 + ++ LD K+ GR E VVGWYHSHPG+GCWLSG+D+NTQ++ + VA+VI Sbjct: 119 NEAYEYMVQYLDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVI 178 Query: 448 DPIQSV-KGKVVIDAFR 495 DP +++ GKV I AFR Sbjct: 179 DPNRTISSGKVDIGAFR 195
>CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (SGN5) (Jun activation domain-binding protein 1) (Kip1 C-terminus-interacting protein 2) Length = 333 Score = 124 bits (312), Expect = 1e-28 Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +1 Query: 109 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 282 IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 56 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 114 Query: 283 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 462 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 115 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 174 Query: 463 VK-GKVVIDAFR 495 + GKV + AFR Sbjct: 175 ISAGKVNLGAFR 186
>CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (SGN5) (Jun activation domain-binding protein 1) Length = 333 Score = 124 bits (312), Expect = 1e-28 Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +1 Query: 109 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 282 IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 56 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 114 Query: 283 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 462 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 115 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 174 Query: 463 VK-GKVVIDAFR 495 + GKV + AFR Sbjct: 175 ISAGKVNLGAFR 186
>CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 332 Score = 124 bits (311), Expect = 2e-28 Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +1 Query: 109 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 282 +S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 55 VSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 113 Query: 283 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 462 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 114 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173 Query: 463 VK-GKVVIDAFR 495 + GKV + AFR Sbjct: 174 ISAGKVNLGAFR 185
>CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 334 Score = 124 bits (311), Expect = 2e-28 Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +1 Query: 109 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 282 +S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 57 VSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115 Query: 283 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 462 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175 Query: 463 VK-GKVVIDAFR 495 + GKV + AFR Sbjct: 176 ISAGKVNLGAFR 187
>CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 334 Score = 124 bits (310), Expect = 2e-28 Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +1 Query: 109 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 282 +S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 55 LSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 113 Query: 283 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 462 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 114 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173 Query: 463 VK-GKVVIDAFR 495 + GKV + AFR Sbjct: 174 ISAGKVNLGAFR 185
>CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 469 Score = 122 bits (305), Expect = 9e-28 Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 3/136 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEA 270 ++ YISSLAL KM H ++G +EVMG+M G+ + + ++ V+DV+ +P GT V+ +A Sbjct: 61 KKTYISSLALCKMSVHAKSGGAIEVMGMMTGKIIKN-SIIVMDVYPLPVEGTETRVNAQA 119 Query: 271 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + + L+ LKQ GR E +VGWYHSHPG+GCWLSG+D+ TQ + +A+VID Sbjct: 120 EGYEYMVQYLENLKQVGRDENIVGWYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVID 179 Query: 451 PIQSV-KGKVVIDAFR 495 P+++ +GKV I AFR Sbjct: 180 PMKTEDQGKVEIGAFR 195
>CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4.-.-)| (Signalosome subunit 5a) (Jun activation domain-binding homolog 2) Length = 358 Score = 121 bits (303), Expect = 2e-27 Identities = 67/136 (49%), Positives = 89/136 (65%), Gaps = 3/136 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 276 ++V IS+LALLKM+ H R+G +E+MGLM G+ D T+ V+D FA+P GT V A D Sbjct: 57 KRVKISALALLKMVVHARSGGTIEIMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQD 115 Query: 277 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 ++ K GR E VVGWYHSHPG+GCWLSG+D++TQ+ + +AVVID Sbjct: 116 DAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVID 175 Query: 451 PIQSVK-GKVVIDAFR 495 P ++V GKV I AFR Sbjct: 176 PTRTVSAGKVEIGAFR 191
>CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4.-.-)| (Signalosome subunit 5b) (Jun activation domain-binding homolog 1) Length = 357 Score = 120 bits (302), Expect = 2e-27 Identities = 66/136 (48%), Positives = 88/136 (64%), Gaps = 3/136 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 276 ++V+IS+LALLKM+ H R+G +E+MGLM G+ D T+ V+D FA+P GT V A Sbjct: 57 KRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGD-TIIVMDAFALPVEGTETRVNAQS 115 Query: 277 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 ++ K GR E VVGWYHSHPG+GCWLSG+D++TQ + +AVVID Sbjct: 116 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 175 Query: 451 PIQSVK-GKVVIDAFR 495 P ++V GKV I AFR Sbjct: 176 PTRTVSAGKVEIGAFR 191
>CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (JAB1 homolog) Length = 368 Score = 119 bits (297), Expect = 8e-27 Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 3/136 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEA 270 +Q+ IS++ALLKM H + G +E+MGL+ G +D + ++DVFA+P GT V+ +A Sbjct: 54 KQIKISAIALLKMTMHAKRGGNLEIMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQA 112 Query: 271 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + + T +M GR E VVGWYHSHPG+GCWLSG+D++TQ + VA+VID Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVID 172 Query: 451 PIQSVK-GKVVIDAFR 495 P++++ GKV I AFR Sbjct: 173 PLRTMSAGKVDIGAFR 188
>CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 336 Score = 117 bits (294), Expect = 2e-26 Identities = 61/136 (44%), Positives = 87/136 (63%), Gaps = 3/136 (2%) Frame = +1 Query: 103 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV 282 V ISS+A++KM+ H R+G +EVMG+M G +++ T+ + D + +P GT V A D Sbjct: 44 VRISSVAMIKMVMHARSGGNLEVMGMMQG-YIEGSTMVITDAYRLPVEGTETRVNAQDEA 102 Query: 283 --FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 + L + ++ R E V+GWYHSHPG+GCWLSG+D+ TQ + N VAVVIDP Sbjct: 103 NEYMVEYLRLCREENRLENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPD 162 Query: 457 QSV-KGKVVIDAFRLI 501 ++V + KV I AFR I Sbjct: 163 RTVSQNKVEIGAFRTI 178
>CSN5_EMENI (Q5BBF1) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 335 Score = 117 bits (292), Expect = 3e-26 Identities = 65/136 (47%), Positives = 86/136 (63%), Gaps = 3/136 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 276 + V IS++ALLKM+ H R+G +EVMGLM G + + T V D F +P GT V A D Sbjct: 49 KSVRISAVALLKMVMHARSGGSLEVMGLMQGYILPN-TFVVTDAFRLPVEGTETRVNAQD 107 Query: 277 HV--FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + + L ++ GR E VGWYHSHPG+GCWLSG+D++TQ + P VAVVID Sbjct: 108 EANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDMQQMSGP-FVAVVID 166 Query: 451 PIQSVK-GKVVIDAFR 495 P +++ GKV I AFR Sbjct: 167 PERTISAGKVDIGAFR 182
>CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 340 Score = 115 bits (288), Expect = 9e-26 Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 3/136 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 276 + V IS+ AL+KM H R+G +EVMGLM G D T V D F +P GT V A D Sbjct: 50 KHVRISATALIKMTMHARSGGNLEVMGLMQGYTQGD-TFIVTDAFRLPVEGTETRVNAQD 108 Query: 277 HV--FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + LD+ + GR E VVGWYHSHPG+GCWLSG+D++T+ + +AVVID Sbjct: 109 EANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVID 168 Query: 451 PIQSV-KGKVVIDAFR 495 P +++ GKV I AFR Sbjct: 169 PDRTINSGKVDIGAFR 184
>CSN5_YARLI (Q6C703) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 354 Score = 115 bits (288), Expect = 9e-26 Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 3/134 (2%) Frame = +1 Query: 103 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDH- 279 V +SS+AL+KM H R+G +EVMG+M G+ + + T V+D + +P GT V A Sbjct: 56 VLVSSIALVKMAMHARSGGAIEVMGMMTGKILPN-TFVVMDCYPLPVEGTETRVNAQQEG 114 Query: 280 -VFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 F L LK GR E +VGWYHSHPG+GCWLSG+D++TQ + +AVV+DP Sbjct: 115 IEFMVEYLQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPN 174 Query: 457 QSVK-GKVVIDAFR 495 +++ GKV I AFR Sbjct: 175 RTISAGKVEIGAFR 188
>CSN5_CRYNE (Q5KAB0) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 371 Score = 115 bits (287), Expect = 1e-25 Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 3/134 (2%) Frame = +1 Query: 103 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV 282 V IS++AL+KM+ H R+G E+MG+M G+ V D T ++DV A+P GT V A + Sbjct: 51 VKISAVALIKMVTHARSGGIYEIMGIMYGK-VRDGTFWIMDVAALPVQGTETRVNAGNEA 109 Query: 283 --FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 + N + G+ E++ GWYHSHPG+GCWLSG+D+NTQ + + N +AVVIDP Sbjct: 110 MEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPN 169 Query: 457 QSVK-GKVVIDAFR 495 ++V GKV I AFR Sbjct: 170 RTVSAGKVEIGAFR 183
>CSN5_ASPFU (Q4WZP2) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 334 Score = 112 bits (280), Expect = 7e-25 Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 3/136 (2%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 276 + + IS++AL+KM H R+G +EVMGLM G + + T V D F +P GT V A + Sbjct: 49 KSIRISAVALIKMTMHARSGGSLEVMGLMQGYILPE-TFVVTDAFRLPVEGTETRVNAQE 107 Query: 277 HV--FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + + L + GR E VGWYHSHPG+GCWLSG+D+ T Q + L VAVVID Sbjct: 108 EANEYMVSYLQSCRDAGRMENAVGWYHSHPGYGCWLSGIDVTT-QDMQQLGGPFVAVVID 166 Query: 451 PIQSVK-GKVVIDAFR 495 P +++ GKV I AFR Sbjct: 167 PERTISAGKVDIGAFR 182
>CSN5_CANAL (Q59PG6) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 213 Score = 108 bits (269), Expect = 1e-23 Identities = 54/140 (38%), Positives = 90/140 (64%), Gaps = 7/140 (5%) Frame = +1 Query: 106 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVF 285 YISSLAL+KM H + G +E+MG+++G+ + +++ V+D + +P GT V A + + Sbjct: 76 YISSLALMKMCTHAQTGGSIEIMGMLVGK-ISGHSIIVMDTYRLPVEGTETRVNAQNEAY 134 Query: 286 QTNMLDMLKQTGR------PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVI 447 T M++ L + + E +VGWYH HP +GCWL G+D++TQ + L +A+V+ Sbjct: 135 -TYMVEYLTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVV 193 Query: 448 DPIQSVK-GKVVIDAFRLIN 504 DP++++K GKV I AFR ++ Sbjct: 194 DPVKTLKQGKVEIGAFRNVS 213
>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 299 Score = 107 bits (268), Expect = 2e-23 Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 3/134 (2%) Frame = +1 Query: 103 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV 282 V IS++ALLKML+H G+P+EVMG + G+ V+ ++ ++D FA+P GT V A + Sbjct: 35 VKISAVALLKMLRHVSQGMPLEVMGYVQGK-VEGASLIILDSFALPVEGTETRVNAHEEA 93 Query: 283 --FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 + + K R E V+GWYHSHP +GCWLSGVD+ TQ+ + VAVV+DP Sbjct: 94 QEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPK 153 Query: 457 QSVKGKVV-IDAFR 495 +S++ V I AFR Sbjct: 154 RSLESPYVNIGAFR 167
>CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 420 Score = 99.4 bits (246), Expect = 7e-21 Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 3/158 (1%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 276 ++ +S+LA +K+L+H G MEV+G++LG +V D + VVD + +P GT V A Sbjct: 71 QKAALSALACMKILRHAFDGGDMEVLGMLLG-YVQDEMIVVVDSYRLPVEGTETRVNAQM 129 Query: 277 HVFQTNMLDMLKQTGRPE--MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 ++ + + +T PE +VGWYHSHPG+GCWLSG+D TQ + +A+V+D Sbjct: 130 ESYEYTVQYL--ETAVPEGLAIVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVD 187 Query: 451 PIQS-VKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGH 561 P +S G + I AFR + S GH Sbjct: 188 PKRSKASGVIDIGAFRTMPETADTRSVSSHSNASRYGH 225
>CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 373 Score = 93.6 bits (231), Expect = 4e-19 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 1/136 (0%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 276 ++ IS LA KML H G +EVMG+++G +D V V D +++P GT V A Sbjct: 64 QKCLISRLATTKMLSHAVDGGDIEVMGMLVGYTSNDMIV-VKDCYSLPVQGTETRVNAHM 122 Query: 277 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 ++ + + + + +VGWYHSHPG+GCWLS +DI TQ + +A+V+DP Sbjct: 123 ESYEYMVQYLDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPK 182 Query: 457 QSVKGKVV-IDAFRLI 501 +S+ G + I AFR + Sbjct: 183 KSLSGNTLDIGAFRTL 198
>CSN5_YEAST (Q12468) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 455 Score = 86.3 bits (212), Expect = 6e-17 Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 13/164 (7%) Frame = +1 Query: 61 QPGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMP 240 Q TD P S V IS L+ K+ + G +E+MG+++G + D V V+D F +P Sbjct: 75 QSSTDIP---SYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIV-VMDCFNLP 130 Query: 241 QSGTGVSVEA-----------VDHVFQTNML-DMLKQTGRPEMVVGWYHSHPGFGCWLSG 384 GT V A +D ++ N D G VVGW+HSHPG+ CWLS Sbjct: 131 VVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSN 190 Query: 385 VDINTQQSFEALNPRAVAVVIDPIQSVKGKVV-IDAFRLINPQT 513 +DI TQ + VA+V+DP++S++ K++ + AFR I ++ Sbjct: 191 IDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRTIESKS 234
>CSN5_CANGA (Q6FT36) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 465 Score = 83.2 bits (204), Expect = 5e-16 Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%) Frame = +1 Query: 73 DSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGT 252 +SPL + V +S LA K+L H G +EVMG++LG + + T + D F +P GT Sbjct: 66 NSPLF--YQNVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGN-TFVIFDCFELPVEGT 122 Query: 253 GVSV----EAVDHVFQTNMLDMLKQTGRPEM---VVGWYHSHPGFGCWLSGVDINTQQSF 411 V E+ +++ Q + + R E ++GWYHSHPG+ CWLS +D+ TQ Sbjct: 123 ETMVNAHMESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLN 182 Query: 412 EALNPRAVAVVIDPIQSVKG-KVVIDAFRLINPQTMMLGQEPRQTTSNVGHLNK 570 + +A+V+DP +S KV I +FR Q TT LNK Sbjct: 183 QQHQDPYLAIVVDPHKSKNDQKVRIGSFRTYQDQNDDTNFYELNTTVFDSELNK 236
>BRCC3_MOUSE (P46737) BRCA1/BRCA2-containing complex subunit 3| Length = 291 Score = 62.0 bits (149), Expect = 1e-09 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 33/176 (18%) Frame = +1 Query: 82 LLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDY------------------ 207 ++ + + V++ S A L L H + EVMGL +GE DD Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDIRSDSKFTYTGTEMRTVQE 64 Query: 208 ---TVRVVDVFAM--------PQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHS 354 T+R+V + ++ + +S E + T + + TGRP VVGWYHS Sbjct: 65 KMDTIRIVHIHSVIILRRSDKRKDRVEISPEQLSAA-STEAERLAELTGRPMRVVGWYHS 123 Query: 355 HPGFGCWLSGVDINTQQSFEALNPRAVAVV----IDPIQSVKGKVVIDAFRLINPQ 510 HP W S VD+ TQ ++ ++ V ++ I+ + G+V+ F+ I Q Sbjct: 124 HPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQ 179
>BRCC3_HUMAN (P46736) BRCA1/BRCA2-containing complex subunit 3| Length = 316 Score = 61.2 bits (147), Expect = 2e-09 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 33/176 (18%) Frame = +1 Query: 82 LLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDD--------YT--------- 210 ++ + + V++ S A L L H + EVMGL +GE DD YT Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAE 64 Query: 211 ----VRVVDVFAM--------PQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHS 354 VR+V + ++ + +S E + T + + TGRP VVGWYHS Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAA-STEAERLAELTGRPMRVVGWYHS 123 Query: 355 HPGFGCWLSGVDINTQQSFEALNPRAVAVV----IDPIQSVKGKVVIDAFRLINPQ 510 HP W S VD+ TQ ++ ++ V ++ I+ + G+V+ F+ I Q Sbjct: 124 HPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQ 179
>RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8| Length = 352 Score = 57.0 bits (136), Expect = 4e-08 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 7/140 (5%) Frame = +1 Query: 94 SEQVYISSLALLKMLKH-----GRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMP--QSGT 252 + V ++ L LL ++ H V+G++LG+ D VRV + FA+P + Sbjct: 13 NRSVSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQN-DGKNVRVSNSFAVPFEEDDK 71 Query: 253 GVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRA 432 SV +DH + +M DM K+ E ++GWYHS P L D++ + F+ P Sbjct: 72 DPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPK----LRASDLDINELFKRYTPNP 127 Query: 433 VAVVIDPIQSVKGKVVIDAF 492 + V++D +Q + V DA+ Sbjct: 128 LLVIVD-VQPKETGVPTDAY 146
>IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h) Length = 352 Score = 57.0 bits (136), Expect = 4e-08 Identities = 42/147 (28%), Positives = 81/147 (55%), Gaps = 2/147 (1%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEA 270 +QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T + Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94 Query: 271 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + +Q M+ L+ + VGWY S +G +++ +++Q S++ +V ++ D Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153 Query: 451 PIQSVKGKVVIDAFRLINPQTMMLGQE 531 PI++ +G + + A+RL P+ M + +E Sbjct: 154 PIKTAQGSLSLKAYRL-TPKLMEVCKE 179
>IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h) Length = 352 Score = 57.0 bits (136), Expect = 4e-08 Identities = 42/147 (28%), Positives = 81/147 (55%), Gaps = 2/147 (1%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEA 270 +QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T + Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94 Query: 271 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + +Q M+ L+ + VGWY S +G +++ +++Q S++ +V ++ D Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153 Query: 451 PIQSVKGKVVIDAFRLINPQTMMLGQE 531 PI++ +G + + A+RL P+ M + +E Sbjct: 154 PIKTAQGSLSLKAYRL-TPKLMEVCKE 179
>IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) Length = 352 Score = 57.0 bits (136), Expect = 4e-08 Identities = 42/147 (28%), Positives = 81/147 (55%), Gaps = 2/147 (1%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEA 270 +QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T + Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94 Query: 271 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 450 + +Q M+ L+ + VGWY S +G +++ +++Q S++ +V ++ D Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153 Query: 451 PIQSVKGKVVIDAFRLINPQTMMLGQE 531 PI++ +G + + A+RL P+ M + +E Sbjct: 154 PIKTAQGSLSLKAYRL-TPKLMEVCKE 179
>PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Proteasome subunit p39B) (Protein Mov34) Length = 337 Score = 54.3 bits (129), Expect = 2e-07 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 6/126 (4%) Frame = +1 Query: 91 SSEQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMP--QSGT 252 S +V + L LL ++ H G+ G V+G++LG + + V + FA+P + Sbjct: 6 SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDK 65 Query: 253 GVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRA 432 SV +DH + NM M K+ E VVGWYH+ P L DI + P + Sbjct: 66 DKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPK----LHQNDIAINELVRRYCPNS 121 Query: 433 VAVVID 450 V V+ID Sbjct: 122 VLVIID 127
>MYSM1_CHICK (Q5F3F2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 832 Score = 53.9 bits (128), Expect = 3e-07 Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 1/122 (0%) Frame = +1 Query: 100 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVD 276 QV +SS ALL M H + EV+GL+ G + + D V V TG+ E +D Sbjct: 578 QVKVSSEALLIMDLHSHVSMA-EVIGLLGGRYSEADKVVEVCAAEPCNSLSTGLQCE-MD 635 Query: 277 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 V QT + L G V+GWYHSHP F S DI+TQ +++ R A+ I I Sbjct: 636 PVSQTQASETLAARGYS--VIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIGMI 693 Query: 457 QS 462 S Sbjct: 694 VS 695
>PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog) Length = 324 Score = 53.5 bits (127), Expect = 4e-07 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 9/127 (7%) Frame = +1 Query: 97 EQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVVDV---FAMP--QSG 249 ++V + L LL ++ H G+ G V+G++LG + +V+DV FA+P + Sbjct: 7 QKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS----WQKKVLDVSNSFAVPFDEDD 62 Query: 250 TGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPR 429 SV +DH + NM M K+ E +VGWYH+ P L DI + + P Sbjct: 63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPN 118 Query: 430 AVAVVID 450 +V V+ID Sbjct: 119 SVLVIID 125
>PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein) Length = 321 Score = 53.5 bits (127), Expect = 4e-07 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 9/127 (7%) Frame = +1 Query: 97 EQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVVDV---FAMP--QSG 249 ++V + L LL ++ H G+ G V+G++LG + +V+DV FA+P + Sbjct: 7 QKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS----WQKKVLDVSNSFAVPFDEDD 62 Query: 250 TGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPR 429 SV +DH + NM M K+ E +VGWYH+ P L DI + + P Sbjct: 63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPN 118 Query: 430 AVAVVID 450 +V V+ID Sbjct: 119 SVLVIID 125
>RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8| Length = 324 Score = 51.2 bits (121), Expect = 2e-06 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 5/123 (4%) Frame = +1 Query: 97 EQVYISSLALLKML---KHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 261 +QV + L LL + G V+G++LG+ D V V + +A+P + S Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGD-VVNVANSYAIPFEEDEKNAS 73 Query: 262 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 441 V +DH F +M +M K+ E +VGWYH+ P L D+ + P V V Sbjct: 74 VWFLDHNFMESMNEMFKKINANEKLVGWYHTGP----QLRPSDLEINNLLKKYIPNPVLV 129 Query: 442 VID 450 +ID Sbjct: 130 IID 132
>RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8| Length = 326 Score = 51.2 bits (121), Expect = 2e-06 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%) Frame = +1 Query: 97 EQVYISSLALLKMLKH-GRAGVP--MEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 261 EQV ++ L LL +L H R P +G++LG+ T++V + FA+P + Sbjct: 6 EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGS-TIKVTNSFALPFEEDEKNPD 64 Query: 262 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 360 V +DH + NM DM K+ E ++GWYHS P Sbjct: 65 VWFLDHNYIENMNDMCKKINAKEKMIGWYHSGP 97
>IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h) Length = 337 Score = 51.2 bits (121), Expect = 2e-06 Identities = 37/132 (28%), Positives = 61/132 (46%) Frame = +1 Query: 103 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV 282 V I LA+LK++KH + P V G +LG V + V + F P +EA Sbjct: 25 VQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGS-VLEVTNCFPFPVRDDDEEIEADGAN 83 Query: 283 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 462 +Q M+ L++ VGWY S G + + I T +++ R V ++ DP ++ Sbjct: 84 YQLEMMRCLREVNVDNNTVGWYQS-TVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKA 142 Query: 463 VKGKVVIDAFRL 498 G + + A +L Sbjct: 143 DLGVLALKALKL 154
>MYSM1_HUMAN (Q5VVJ2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 828 Score = 50.8 bits (120), Expect = 3e-06 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 1/122 (0%) Frame = +1 Query: 100 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVD 276 QV ++S ALL M H + EV+GL+ G + + D V V TG+ E +D Sbjct: 576 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE-MD 633 Query: 277 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 V QT + L G V+GWYHSHP F S DI+TQ +++ R A I I Sbjct: 634 PVSQTQASETLAVRGFS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI 691 Query: 457 QS 462 S Sbjct: 692 VS 693
>RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8| Length = 337 Score = 49.7 bits (117), Expect = 6e-06 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVPME---VMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 261 E+V I+ L LL L H E +G++LG+ + T+RV + FA+P + Sbjct: 5 EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGD-ANSSTIRVTNSFALPFEEDEKNSD 63 Query: 262 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 360 V +DH + NM +M K+ E ++GWYHS P Sbjct: 64 VWFLDHNYIENMNEMCKKINAKEKLIGWYHSGP 96
>MYSM1_MOUSE (Q69Z66) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 819 Score = 49.3 bits (116), Expect = 8e-06 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 1/122 (0%) Frame = +1 Query: 100 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVD 276 QV +++ ALL M H + EV+GL+ G + + D + V TG+ E +D Sbjct: 567 QVKVAAEALLIMNLHAHVSMA-EVIGLLGGRYSEADKVLEVCAAEPCNSLSTGLQCE-MD 624 Query: 277 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 V QT + L G V+GWYHSHP F S DI+TQ +++ R A I I Sbjct: 625 PVSQTQASETLALRGYS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI 682 Query: 457 QS 462 S Sbjct: 683 VS 684
>RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8| Length = 329 Score = 47.0 bits (110), Expect = 4e-05 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 5/93 (5%) Frame = +1 Query: 97 EQVYISSLALLKMLKH-GRAGVP--MEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 261 + V I+ L LL +L H R P +G++LG+ + T+RV + FA+P + Sbjct: 6 DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTN-TIRVTNSFALPFEEDEKNSD 64 Query: 262 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 360 V +DH + +M +M K+ E ++GWYHS P Sbjct: 65 VWFLDHNYIESMNEMCKKINAKEKLIGWYHSGP 97
>STALP_MOUSE (Q76N33) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) (AMSH family protein) (AMSH-FP) Length = 436 Score = 46.6 bits (109), Expect = 5e-05 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +1 Query: 163 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 339 +E G++ G+ +++T+ V V VE V+ +F Q + + Sbjct: 291 IETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFNV-------QDQHGLLTL 343 Query: 340 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 504 GW H+HP +LS VD++T S++ + P A+A+V P G FRL N Sbjct: 344 GWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTN 393
>STALP_HUMAN (Q96FJ0) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) Length = 436 Score = 45.8 bits (107), Expect = 9e-05 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +1 Query: 163 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 339 +E G++ G+ +++T+ V V +E V+ +F Q + + Sbjct: 291 IETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNV-------QDQHDLLTL 343 Query: 340 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 504 GW H+HP +LS VD++T S++ + P A+A+V P G FRL N Sbjct: 344 GWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTN 393
>STALP_PONPY (Q5R558) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) Length = 436 Score = 43.9 bits (102), Expect = 3e-04 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Frame = +1 Query: 163 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 339 +E G++ G+ +++T+ V V VE V+ +F Q + + Sbjct: 291 IETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDVENVEELFNV-------QDQHDLLTL 343 Query: 340 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 504 GW H+HP +LS VD++T S++ + A+A+V P G FRL N Sbjct: 344 GWIHTHPTQTAFLSSVDLHTHCSYQLMLSEAIAIVCSPKHKDTG-----IFRLTN 393
>PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulatory subunit 7| (26S proteasome regulatory subunit rpn8) (MOV34 protein) Length = 308 Score = 43.5 bits (101), Expect = 4e-04 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 5/123 (4%) Frame = +1 Query: 97 EQVYISSLALLKMLKHGRAGVP---MEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 261 E+V + L LL ++ H V+G++LG V V + +A+P + S Sbjct: 15 EKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRG-VVDVTNSYAVPFEEDDKDPS 73 Query: 262 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 441 + +DH + +M M K+ E VVGWY + P L D++ F P V V Sbjct: 74 IWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPK----LRENDLDVHALFNGYVPNPVLV 129 Query: 442 VID 450 +ID Sbjct: 130 IID 132
>STABP_XENLA (Q63ZM7) STAM-binding protein-like (EC 3.1.2.15)| Length = 416 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Frame = +1 Query: 163 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 339 +E G++ G+ + +++TV V V + E+ + +F L Q + + + Sbjct: 271 VETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELF-------LIQDQQGLITL 323 Query: 340 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 453 GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 324 GWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 361
>STABP_HUMAN (O95630) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 43.1 bits (100), Expect = 6e-04 Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%) Frame = +1 Query: 79 PLLDSSEQVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFV-DDYTVRVVDVFAMPQSG 249 P +D V + + L+ A +E G++ G+ + +++T+ V + Sbjct: 249 PTIDGLRHVVVPGRLCPQFLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGS 308 Query: 250 TGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPR 429 + E + +F L Q + + +GW H+HP +LS VD++T S++ + P Sbjct: 309 DYCNTENEEELF-------LIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPE 361 Query: 430 AVAVVIDP 453 +VA+V P Sbjct: 362 SVAIVCSP 369
>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 357 Score = 42.4 bits (98), Expect = 0.001 Identities = 30/86 (34%), Positives = 47/86 (54%) Frame = +1 Query: 169 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 348 V+G +LG VD ++V V + F++P + + V AVD F NM ++ K+ E+++GWY Sbjct: 116 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 173 Query: 349 HSHPGFGCWLSGVDINTQQSFEALNP 426 + G V I+ S EA NP Sbjct: 174 AT--GHDITEHSVLIHEYYSREAPNP 197
>STABP_BRARE (Q6TH47) STAM-binding protein-like (EC 3.1.2.15)| Length = 418 Score = 42.0 bits (97), Expect = 0.001 Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 3/129 (2%) Frame = +1 Query: 76 SPLLDSSEQVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVVDVFAMPQSG 249 S L++ Q+++ + + LK +E G++ G+ + + V V Q G Sbjct: 242 SALVNGLRQLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKN-AFTVTHVIVPKQCG 300 Query: 250 TGVSVEAVDHVFQTNMLDM-LKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNP 426 D+ N ++ L Q + +GW H+HP +LS VD++T S++ + P Sbjct: 301 ------GPDYCDTENEEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLP 354 Query: 427 RAVAVVIDP 453 ++A+V P Sbjct: 355 ESIAIVCSP 363
>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 361 Score = 41.2 bits (95), Expect = 0.002 Identities = 29/86 (33%), Positives = 47/86 (54%) Frame = +1 Query: 169 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 348 V+G +LG VD ++V V + F++P + + V AVD F NM ++ K+ E+++GWY Sbjct: 120 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 177 Query: 349 HSHPGFGCWLSGVDINTQQSFEALNP 426 + G V I+ S E+ NP Sbjct: 178 AT--GHDITEHSVLIHEYYSRESPNP 201
>STABP_RAT (Q8R424) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +1 Query: 331 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 453 + +GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 329 LTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 369
>STABP_MOUSE (Q9CQ26) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +1 Query: 331 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 453 + +GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 329 LTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 369
>IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f) Length = 293 Score = 38.5 bits (88), Expect = 0.014 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +1 Query: 169 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 348 V+G +LG + D TV + + +A+P + + V AVD + NML + E +VGWY Sbjct: 52 VIGTLLGSILPDGTVDIRNSYAVPHNESSDQV-AVDIDYHHNMLASHLKVNSKETIVGWY 110 Query: 349 HSHPG 363 + G Sbjct: 111 STGAG 115
>ARGD_METJA (Q58131) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 398 Score = 30.8 bits (68), Expect = 2.9 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +1 Query: 253 GVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRA 432 G + ++ + F L L T +P+ G+Y PGF ++ DI + EA+ + Sbjct: 128 GGEIISMYNAFHGRTLTTLAATPKPKYQDGFYPLPPGFK-YVPFNDIEALK--EAITDKT 184 Query: 433 VAVVIDPIQSVKGKVVID 486 A++I+P+Q G V D Sbjct: 185 AAIMIEPVQGEGGIHVAD 202
>PPAC_STRR6 (P65756) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 311 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +1 Query: 70 TDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDD 204 T SPL E V +S + +M K VP E+ GLML + D Sbjct: 107 TASPLYMRLEPVGSASSIVYRMFKEHGVAVPKEIAGLMLSGLISD 151
>PPAC_STRPN (P65755) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 311 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +1 Query: 70 TDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDD 204 T SPL E V +S + +M K VP E+ GLML + D Sbjct: 107 TASPLYMRLEPVGSASSIVYRMFKEHGVAVPKEIAGLMLSGLISD 151
>DNAA_NEIMB (Q9JXS7) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 3.7 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +1 Query: 277 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 457 QSVKGK 474 Q +KGK Sbjct: 288 QFIKGK 293
>DNAA_NEIMA (Q9JW45) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 3.7 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +1 Query: 277 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 457 QSVKGK 474 Q +KGK Sbjct: 288 QFIKGK 293
>DNAA_NEIG1 (Q5FAJ2) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 3.7 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +1 Query: 277 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 456 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 457 QSVKGK 474 Q +KGK Sbjct: 288 QFIKGK 293
>RM19_DROME (Q9VHN6) 39S ribosomal protein L19, mitochondrial precursor (L19mt)| Length = 306 Score = 30.0 bits (66), Expect = 4.9 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -3 Query: 65 GCPIPVAPLKIXLEPLPWLQ 6 G P+PV +K+ L P PWL+ Sbjct: 203 GAPVPVNDIKVVLRPRPWLE 222
>PPAC_LISMO (Q8Y757) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 308 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 70 TDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDD 204 T PL +E V ++ LLKM + V V GLML + D Sbjct: 105 TSDPLYYRAEPVGCTTTILLKMFRENEVEVSKTVAGLMLSAIISD 149
>PPAC_LISMF (Q71ZM2) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 308 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 70 TDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDD 204 T PL +E V ++ LLKM + V V GLML + D Sbjct: 105 TSDPLYYRAEPVGCTTTILLKMFRENEVEVSKTVAGLMLSAIISD 149
>PPAC_LISIN (Q92BR1) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 308 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 70 TDSPLLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDD 204 T PL +E V ++ LLKM + V V GLML + D Sbjct: 105 TSDPLYYRAEPVGCTTTILLKMFRENEVEVSKTVAGLMLSAIISD 149
>SEB1_CAEEL (Q09460) Calcitonin receptor-like protein seb-1| Length = 546 Score = 29.6 bits (65), Expect = 6.4 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +3 Query: 444 DRSHPECQGESGH*CI-PSH*PSDHDAWPGATADNIECWAP 563 + S+P C+ H + P P+D W AT D + CW P Sbjct: 46 EESYPLCKKMLDHNNLFPERDPNDTRIWCNATYDTVLCWPP 86
>HPS6_RAT (Q7M733) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye| protein homolog) (Ruby-eye-like protein) (Ru) Length = 809 Score = 29.3 bits (64), Expect = 8.3 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 9/111 (8%) Frame = -3 Query: 569 LFRCPTFDVVCRGSWPSIMV*GLMRRNASMTTFP-----LTLWMGS----ITTATALGFN 417 L CP+F ++ ++ + TT+P L +W S I A +LG + Sbjct: 185 LHHCPSFGLIASRKELFLV--------PTSTTWPGVAHVLLIWSPSKGKVIVAAPSLGLS 236 Query: 416 ASKLC*VLMSTPESQQPNPGCEWYQPTTISGLPVCLSMSSMLVWKTWSTAS 264 SK S P G W T + GLP LS L TW+ +S Sbjct: 237 HSK----------SLNPKQGDTWDFRTLLRGLPGFLSPREPLAVHTWAPSS 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,171,100 Number of Sequences: 219361 Number of extensions: 1477829 Number of successful extensions: 4717 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 4532 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4687 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
