ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6k03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK109403.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D04, full insert sequence Length = 1212 Score = 795 bits (401), Expect = 0.0 Identities = 488/517 (94%) Strand = Plus / Plus Query: 50 ccgggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctaca 109 |||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct: 112 ccggcatggggcagccgccgtcggactcgccgctgctcgactcctccgagcaggtctaca 171 Query: 110 tctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggagg 169 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 172 tctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgccgatggagg 231 Query: 170 tgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtct 229 ||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||| Sbjct: 232 tgatggggctgatgctgggggagttcgtcgacgactacacggtcagggtggtcgacgtct 291 Query: 230 tcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccaga 289 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 292 tcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccatgtcttccaga 351 Query: 290 ccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtacc 349 ||||||||||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 352 ccaacatgctcgacatgctcaagcagaccgggaggccagaaatggtggtaggttggtacc 411 Query: 350 actcgcatcctggatttggttgctggctttcaggagttgacatcaatactcagcagagtt 409 | || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 attcccatcctggatttggttgctggctttcaggagttgacatcaatactcaacagagtt 471 Query: 410 ttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagagtgtcaagg 469 ||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 472 ttgaagctttaaaccccagggcagttgccgtcgtgatagatcccatccaaagtgtcaagg 531 Query: 470 ggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgcttggccagg 529 ||||||| |||||||||||||| || || |||||||||||||||||||||||||| |||| Sbjct: 532 ggaaagttgtcattgatgcatttcgccttattaaccctcagaccatgatgcttggtcagg 591 Query: 530 agccacggcagacaacatcgaatgttgggcacctaaa 566 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 592 agccacgacagacaacatcaaatgttgggcacctaaa 628
>dbj|AK112020.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B06, full insert sequence Length = 1142 Score = 795 bits (401), Expect = 0.0 Identities = 488/517 (94%) Strand = Plus / Plus Query: 50 ccgggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctaca 109 |||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct: 110 ccggcatggggcagccgccgtcggactcgccgctgctcgactcctccgagcaggtctaca 169 Query: 110 tctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggagg 169 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 170 tctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgccgatggagg 229 Query: 170 tgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtct 229 ||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||| Sbjct: 230 tgatggggctgatgctgggggagttcgtcgacgactacacggtcagggtggtcgacgtct 289 Query: 230 tcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccaga 289 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 290 tcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccatgtcttccaga 349 Query: 290 ccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtacc 349 ||||||||||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 350 ccaacatgctcgacatgctcaagcagaccgggaggccagaaatggtggtaggttggtacc 409 Query: 350 actcgcatcctggatttggttgctggctttcaggagttgacatcaatactcagcagagtt 409 | || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 410 attcccatcctggatttggttgctggctttcaggagttgacatcaatactcaacagagtt 469 Query: 410 ttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagagtgtcaagg 469 ||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 470 ttgaagctttaaaccccagggcagttgccgtcgtgatagatcccatccaaagtgtcaagg 529 Query: 470 ggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgcttggccagg 529 ||||||| |||||||||||||| || || |||||||||||||||||||||||||| |||| Sbjct: 530 ggaaagttgtcattgatgcatttcgccttattaaccctcagaccatgatgcttggtcagg 589 Query: 530 agccacggcagacaacatcgaatgttgggcacctaaa 566 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 590 agccacgacagacaacatcaaatgttgggcacctaaa 626
>dbj|AK111763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062E06, full insert sequence Length = 1115 Score = 795 bits (401), Expect = 0.0 Identities = 488/517 (94%) Strand = Plus / Plus Query: 50 ccgggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctaca 109 |||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct: 109 ccggcatggggcagccgccgtcggactcgccgctgctcgactcctccgagcaggtctaca 168 Query: 110 tctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggagg 169 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 169 tctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgccgatggagg 228 Query: 170 tgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtct 229 ||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||| Sbjct: 229 tgatggggctgatgctgggggagttcgtcgacgactacacggtcagggtggtcgacgtct 288 Query: 230 tcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccaga 289 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 289 tcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccatgtcttccaga 348 Query: 290 ccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtacc 349 ||||||||||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 349 ccaacatgctcgacatgctcaagcagaccgggaggccagaaatggtggtaggttggtacc 408 Query: 350 actcgcatcctggatttggttgctggctttcaggagttgacatcaatactcagcagagtt 409 | || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 409 attcccatcctggatttggttgctggctttcaggagttgacatcaatactcaacagagtt 468 Query: 410 ttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagagtgtcaagg 469 ||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 469 ttgaagctttaaaccccagggcagttgccgtcgtgatagatcccatccaaagtgtcaagg 528 Query: 470 ggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgcttggccagg 529 ||||||| |||||||||||||| || || |||||||||||||||||||||||||| |||| Sbjct: 529 ggaaagttgtcattgatgcatttcgccttattaaccctcagaccatgatgcttggtcagg 588 Query: 530 agccacggcagacaacatcgaatgttgggcacctaaa 566 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 589 agccacgacagacaacatcaaatgttgggcacctaaa 625
>ref|NM_188020.1| Oryza sativa (japonica cultivar-group), Ozsa8440 predicted mRNA Length = 924 Score = 743 bits (375), Expect = 0.0 Identities = 486/523 (92%) Strand = Plus / Plus Query: 52 gggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctacatc 111 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 34 gggatggggcagccgccgacggactcgccgctgctcgactcctccgagcaggtctacatc 93 Query: 112 tcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggaggtg 171 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 94 tcctccctcgccctcctcaagatgctcaagcacgggcgggccggcgtgccgatggaggtg 153 Query: 172 atgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtcttc 231 ||||| |||||||| || |||||||||||||||||||| ||||||||||| || |||||| Sbjct: 154 atggggctgatgctcggggagttcgtcgacgactacaccgtcagggtggtcgacgtcttc 213 Query: 232 gccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccagacc 291 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 214 gccatgccgcagagcgggacgggcgtcagcgtcgaggccgtcgaccacgtcttccagacc 273 Query: 292 aacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccac 351 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 274 aacatgctcgacatgctcaagcagaccgggagaccagaaatggtggtgggctggtatcac 333 Query: 352 tcgcatcctggatttggttgctggctttcaggagttgacatcaatactcagcagagtttt 411 || |||||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 334 tcccatcctggatttggatgttggctttcaggtgttgatatcaacactcagcagagtttt 393 Query: 412 gaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagagtgtcaagggg 471 ||||| ||||| |||||||| ||||| ||||||||||| || |||||||||||||||||| Sbjct: 394 gaagctttaaatcccagggctgttgcagttgtgatagacccaatccagagtgtcaagggg 453 Query: 472 aaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgcttggccaggag 531 || ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 454 aaggtggtcattgatgcatttcgtctcattaatcctcagaccatgatgcttggccaggaa 513 Query: 532 ccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 || || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 514 ccgcgacagacaacatcaaatgttgggcatctaaacaaaccat 556
>dbj|AK099455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022M19, full insert sequence Length = 1220 Score = 743 bits (375), Expect = 0.0 Identities = 486/523 (92%) Strand = Plus / Plus Query: 52 gggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctacatc 111 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gggatggggcagccgccgacggactcgccgctgctcgactcctccgagcaggtctacatc 179 Query: 112 tcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggaggtg 171 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 180 tcctccctcgccctcctcaagatgctcaagcacgggcgggccggcgtgccgatggaggtg 239 Query: 172 atgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtcttc 231 ||||| |||||||| || |||||||||||||||||||| ||||||||||| || |||||| Sbjct: 240 atggggctgatgctcggggagttcgtcgacgactacaccgtcagggtggtcgacgtcttc 299 Query: 232 gccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccagacc 291 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 300 gccatgccgcagagcgggacgggcgtcagcgtcgaggccgtcgaccacgtcttccagacc 359 Query: 292 aacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccac 351 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 360 aacatgctcgacatgctcaagcagaccgggagaccagaaatggtggtgggctggtatcac 419 Query: 352 tcgcatcctggatttggttgctggctttcaggagttgacatcaatactcagcagagtttt 411 || |||||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 420 tcccatcctggatttggatgttggctttcaggtgttgatatcaacactcagcagagtttt 479 Query: 412 gaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagagtgtcaagggg 471 ||||| ||||| |||||||| ||||| ||||||||||| || |||||||||||||||||| Sbjct: 480 gaagctttaaatcccagggctgttgcagttgtgatagacccaatccagagtgtcaagggg 539 Query: 472 aaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgcttggccaggag 531 || ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 540 aaggtggtcattgatgcatttcgtctcattaatcctcagaccatgatgcttggccaggaa 599 Query: 532 ccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 || || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 600 ccgcgacagacaacatcaaatgttgggcatctaaacaaaccat 642
>dbj|AB037152.1| Oryza sativa (japonica cultivar-group) OsRPN11 mRNA for 26S proteasome regulatory particle non-ATPase subunit11, complete cds Length = 1129 Score = 743 bits (375), Expect = 0.0 Identities = 486/523 (92%) Strand = Plus / Plus Query: 52 gggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctacatc 111 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 73 gggatggggcagccgccgacggactcgccgctgctcgactcctccgagcaggtctacatc 132 Query: 112 tcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggaggtg 171 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 133 tcctccctcgccctcctcaagatgctcaagcacgggcgggccggcgtgccgatggaggtg 192 Query: 172 atgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtcttc 231 ||||| |||||||| || |||||||||||||||||||| ||||||||||| || |||||| Sbjct: 193 atggggctgatgctcggggagttcgtcgacgactacaccgtcagggtggtcgacgtcttc 252 Query: 232 gccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccagacc 291 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 253 gccatgccgcagagcgggacgggcgtcagcgtcgaggccgtcgaccacgtcttccagacc 312 Query: 292 aacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccac 351 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 313 aacatgctcgacatgctcaagcagaccgggagaccagaaatggtggtgggctggtatcac 372 Query: 352 tcgcatcctggatttggttgctggctttcaggagttgacatcaatactcagcagagtttt 411 || |||||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 373 tcccatcctggatttggatgttggctttcaggtgttgatatcaacactcagcagagtttt 432 Query: 412 gaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagagtgtcaagggg 471 ||||| ||||| |||||||| ||||| ||||||||||| || |||||||||||||||||| Sbjct: 433 gaagctttaaatcccagggctgttgcagttgtgatagacccaatccagagtgtcaagggg 492 Query: 472 aaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgcttggccaggag 531 || ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 493 aaggtggtcattgatgcatttcgtctcattaatcctcagaccatgatgcttggccaggaa 552 Query: 532 ccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 || || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 553 ccgcgacagacaacatcaaatgttgggcatctaaacaaaccat 595
>gb|BT009132.1| Triticum aestivum clone wl1n.pk0036.c3:fis, full insert mRNA sequence Length = 1318 Score = 636 bits (321), Expect = e-179 Identities = 468/517 (90%) Strand = Plus / Plus Query: 50 ccgggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctaca 109 |||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 124 ccggcatggggcagccgccgacggactcgccgctgctcgattcctccgagcaggtctaca 183 Query: 110 tctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggagg 169 |||||||||| || || |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 184 tctcctccctagcgcttctcaagatgctcaagcacgggagggctggggtgcccatggagg 243 Query: 170 tgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtct 229 | |||||||| ||||| ||||||||||||||||||||||| |||||||| || || |||| Sbjct: 244 tcatgggcctcatgctcggcgagttcgtcgacgactacaccgtcagggtcgtcgacgtct 303 Query: 230 tcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccaga 289 |||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 304 tcgccatgccgcagagcgggactggtgtcagcgtcgaggccgtagaccacgtcttccaga 363 Query: 290 ccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtacc 349 | |||||||| |||||||| ||||||||||| || || |||||||| ||||| ||||| | Sbjct: 364 caaacatgcttgacatgcttaagcagaccggcaggccagaaatggttgtaggttggtatc 423 Query: 350 actcgcatcctggatttggttgctggctttcaggagttgacatcaatactcagcagagtt 409 |||| |||||||| || || |||||||| ||||| || || ||||||||||||||||||| Sbjct: 424 actcacatcctggcttcggatgctggctatcaggcgtcgatatcaatactcagcagagtt 483 Query: 410 ttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagagtgtcaagg 469 ||||||| || |||||||| || ||||||||||||||||| |||||||||||||| |||| Sbjct: 484 ttgaagctttgaaccccagagccgttgctgttgtgatagaccccatccagagtgtgaagg 543 Query: 470 ggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgcttggccagg 529 |||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 544 ggaaggtggttattgatgcattccgcctcattaatcctcagaccatgatgcttggccagg 603 Query: 530 agccacggcagacaacatcgaatgttgggcacctaaa 566 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 604 agccacgtcagacaacatcaaatgttgggcacctaaa 640
>gb|AY104261.1| Zea mays PCO099067 mRNA sequence Length = 1282 Score = 636 bits (321), Expect = e-179 Identities = 468/517 (90%) Strand = Plus / Plus Query: 50 ccgggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctaca 109 |||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 100 ccggcatggggcagccgccgacggactcgccgctgctcgattcctccgagcaggtctaca 159 Query: 110 tctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggagg 169 |||||||||| || || |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 160 tctcctccctagcgcttctcaagatgctcaagcacgggagggctggggtgcccatggagg 219 Query: 170 tgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtct 229 | |||||||| ||||| ||||||||||| ||||||||||| |||||||| || || |||| Sbjct: 220 tcatgggcctcatgctcggcgagttcgttgacgactacaccgtcagggtcgtcgacgtct 279 Query: 230 tcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccaga 289 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 280 tcgccatgccgcagagcgggactggtgtcagcgtcgaggccgtcgaccacgtcttccaga 339 Query: 290 ccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtacc 349 | |||||||| |||||||| ||||||||||| || || |||||||| ||||| ||||| | Sbjct: 340 caaacatgcttgacatgcttaagcagaccggcaggccagaaatggttgtaggttggtatc 399 Query: 350 actcgcatcctggatttggttgctggctttcaggagttgacatcaatactcagcagagtt 409 |||| |||||||| || || |||||||| ||||| || || ||||||||||||||||||| Sbjct: 400 actcacatcctggcttcggatgctggctatcaggcgtcgatatcaatactcagcagagtt 459 Query: 410 ttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagagtgtcaagg 469 ||||||| || |||||||| || ||||||||||||||||| |||||||||||||| |||| Sbjct: 460 ttgaagctttgaaccccagagccgttgctgttgtgatagaccccatccagagtgtgaagg 519 Query: 470 ggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgcttggccagg 529 |||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 520 ggaaggtggttattgatgcattccgcctcattaatcctcagaccatgatgcttggccagg 579 Query: 530 agccacggcagacaacatcgaatgttgggcacctaaa 566 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 580 agccacgtcagacaacatcaaatgttgggcacctaaa 616
>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 Score = 301 bits (152), Expect = 1e-78 Identities = 170/176 (96%) Strand = Plus / Plus Query: 145 gggagggccggcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgac 204 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 102885 gggagggccggcgtgccgatggaggtgatggggctgatgctgggggagttcgtcgacgac 102944 Query: 205 tacacggtcagggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtc 264 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 102945 tacacggtcagggtggtcgacgtcttcgccatgccgcagagcgggaccggggtcagcgtc 103004 Query: 265 gaggccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgg 320 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103005 gaggccgtcgaccatgtcttccagaccaacatgctcgacatgctcaagcagaccgg 103060 Score = 240 bits (121), Expect = 4e-60 Identities = 154/165 (93%) Strand = Plus / Plus Query: 402 gcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagag 461 ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 105254 gcagagttttgaagctttaaaccccagggcagttgccgtcgtgatagatcccatccaaag 105313 Query: 462 tgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgct 521 ||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||| Sbjct: 105314 tgtcaaggggaaagttgtcattgatgcatttcgccttattaaccctcagaccatgatgct 105373 Query: 522 tggccaggagccacggcagacaacatcgaatgttgggcacctaaa 566 ||| ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 105374 tggtcaggagccacgacagacaacatcaaatgttgggcacctaaa 105418 Score = 153 bits (77), Expect = 8e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 50 ccgggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctaca 109 |||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct: 102720 ccggcatggggcagccgccgtcggactcgccgctgctcgactcctccgagcaggtctaca 102779 Query: 110 tctcctccctcgccctcctcaagatgctcaagcacgg 146 ||||||||||||||||||||||||||||||||||||| Sbjct: 102780 tctcctccctcgccctcctcaagatgctcaagcacgg 102816 Score = 123 bits (62), Expect = 7e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 328 gaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagtt 387 |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 103704 gaaatggtggtaggttggtaccattcccatcctggatttggttgctggctttcaggagtt 103763 Query: 388 gacatcaatactca 401 |||||||||||||| Sbjct: 103764 gacatcaatactca 103777
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 301 bits (152), Expect = 1e-78 Identities = 170/176 (96%) Strand = Plus / Plus Query: 145 gggagggccggcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgac 204 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 17726127 gggagggccggcgtgccgatggaggtgatggggctgatgctgggggagttcgtcgacgac 17726186 Query: 205 tacacggtcagggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtc 264 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 17726187 tacacggtcagggtggtcgacgtcttcgccatgccgcagagcgggaccggggtcagcgtc 17726246 Query: 265 gaggccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgg 320 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 17726247 gaggccgtcgaccatgtcttccagaccaacatgctcgacatgctcaagcagaccgg 17726302 Score = 240 bits (121), Expect = 4e-60 Identities = 154/165 (93%) Strand = Plus / Plus Query: 402 gcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagag 461 ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 17728496 gcagagttttgaagctttaaaccccagggcagttgccgtcgtgatagatcccatccaaag 17728555 Query: 462 tgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgct 521 ||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||| Sbjct: 17728556 tgtcaaggggaaagttgtcattgatgcatttcgccttattaaccctcagaccatgatgct 17728615 Query: 522 tggccaggagccacggcagacaacatcgaatgttgggcacctaaa 566 ||| ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 17728616 tggtcaggagccacgacagacaacatcaaatgttgggcacctaaa 17728660 Score = 153 bits (77), Expect = 8e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 50 ccgggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctaca 109 |||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct: 17725962 ccggcatggggcagccgccgtcggactcgccgctgctcgactcctccgagcaggtctaca 17726021 Query: 110 tctcctccctcgccctcctcaagatgctcaagcacgg 146 ||||||||||||||||||||||||||||||||||||| Sbjct: 17726022 tctcctccctcgccctcctcaagatgctcaagcacgg 17726058 Score = 123 bits (62), Expect = 7e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 328 gaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagtt 387 |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 17726946 gaaatggtggtaggttggtaccattcccatcctggatttggttgctggctttcaggagtt 17727005 Query: 388 gacatcaatactca 401 |||||||||||||| Sbjct: 17727006 gacatcaatactca 17727019
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 270 bits (136), Expect = 5e-69 Identities = 163/172 (94%) Strand = Plus / Plus Query: 149 gggccggcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactaca 208 ||||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||| Sbjct: 9165661 gggccggcgtgccgatggaggtgatggggctgatgctcggggagttcgtcgacgactaca 9165720 Query: 209 cggtcagggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgagg 268 | ||||||||||| || |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 9165721 ccgtcagggtggtcgacgtcttcgccatgccgcagagcgggacgggcgtcagcgtcgagg 9165780 Query: 269 ccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgg 320 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165781 ccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgg 9165832 Score = 232 bits (117), Expect = 1e-57 Identities = 159/173 (91%) Strand = Plus / Plus Query: 402 gcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagag 461 ||||||||||||||| ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 9167903 gcagagttttgaagctttaaatcccagggctgttgcagttgtgatagacccaatccagag 9167962 Query: 462 tgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgct 521 |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 9167963 tgtcaaggggaaggtggtcattgatgcatttcgtctcattaatcctcagaccatgatgct 9168022 Query: 522 tggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 ||||||||| || || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 9168023 tggccaggaaccgcgacagacaacatcaaatgttgggcatctaaacaaaccat 9168075 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Plus Query: 52 gggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctacatc 111 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9165487 gggatggggcagccgccgacggactcgccgctgctcgactcctccgagcaggtctacatc 9165546 Query: 112 tcctccctcgccctcctcaagatgctcaagcacgg 146 ||||||||||||||||||||||||||||||||||| Sbjct: 9165547 tcctccctcgccctcctcaagatgctcaagcacgg 9165581 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 322 agacctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttca 381 ||||| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||| Sbjct: 9167254 agaccagaaatggtggtgggctggtatcactcccatcctggatttggatgttggctttca 9167313 Query: 382 ggagttgacatcaatactcagcag 405 || ||||| ||||| ||||||||| Sbjct: 9167314 ggtgttgatatcaacactcagcag 9167337
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 270 bits (136), Expect = 5e-69 Identities = 163/172 (94%) Strand = Plus / Plus Query: 149 gggccggcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactaca 208 ||||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||| Sbjct: 66043 gggccggcgtgccgatggaggtgatggggctgatgctcggggagttcgtcgacgactaca 66102 Query: 209 cggtcagggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgagg 268 | ||||||||||| || |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 66103 ccgtcagggtggtcgacgtcttcgccatgccgcagagcgggacgggcgtcagcgtcgagg 66162 Query: 269 ccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgg 320 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66163 ccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgg 66214 Score = 232 bits (117), Expect = 1e-57 Identities = 159/173 (91%) Strand = Plus / Plus Query: 402 gcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatccagag 461 ||||||||||||||| ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 68285 gcagagttttgaagctttaaatcccagggctgttgcagttgtgatagacccaatccagag 68344 Query: 462 tgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgct 521 |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 68345 tgtcaaggggaaggtggtcattgatgcatttcgtctcattaatcctcagaccatgatgct 68404 Query: 522 tggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 ||||||||| || || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 68405 tggccaggaaccgcgacagacaacatcaaatgttgggcatctaaacaaaccat 68457 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Plus Query: 52 gggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtctacatc 111 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 65869 gggatggggcagccgccgacggactcgccgctgctcgactcctccgagcaggtctacatc 65928 Query: 112 tcctccctcgccctcctcaagatgctcaagcacgg 146 ||||||||||||||||||||||||||||||||||| Sbjct: 65929 tcctccctcgccctcctcaagatgctcaagcacgg 65963 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 322 agacctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttca 381 ||||| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||| Sbjct: 67636 agaccagaaatggtggtgggctggtatcactcccatcctggatttggatgttggctttca 67695 Query: 382 ggagttgacatcaatactcagcag 405 || ||||| ||||| ||||||||| Sbjct: 67696 ggtgttgatatcaacactcagcag 67719
>ref|NM_122261.2| Arabidopsis thaliana unknown protein AT5G23540 mRNA, complete cds Length = 1266 Score = 210 bits (106), Expect = 4e-51 Identities = 385/478 (80%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| |||||||| || ||||| |||||||||||||| |||||||| || || || Sbjct: 185 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacggaagagctggt 244 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 || || ||||| || ||||| ||||||| || ||||| || || || ||||| || ||| Sbjct: 245 gttcctatggaagtcatgggattgatgcttggagagtttgtggatgaatacactgttagg 304 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 || |||||||| || || ||||| ||||| || || || || || || || || || || Sbjct: 305 gttgtggatgtttttgcgatgcctcagagtggtactggtgttagtgttgaagctgttgat 364 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 || || |||||||| || |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 365 catgttttccagactaatatgctcgacatgcttaaacagaccggaagacctgagatggtg 424 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || || ||||| || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 425 gttggttggtatcattcacatcctggattcggctgctggctttctggggttgacattaat 484 Query: 397 actcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatc 456 ||||| |||||||||||||| || || | | || || || || ||| ||||||| || Sbjct: 485 actcaacagagttttgaagctttgaatcagcgagctgtagcagtggtggtagatccgatt 544 Query: 457 cagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatg 516 |||||||| || || || ||||| |||||||| ||||| ||| || || |||||||| Sbjct: 545 cagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatccacagaccatt 604 Query: 517 atgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 |||||||| ||||| || || || ||||||||||| |||||||| | |||||||||| Sbjct: 605 atgcttgggcaggaaccccgtcaaacaacatcgaaccttgggcacttgaacaaaccat 662
>gb|AY230845.1| Arabidopsis thaliana 26S proteasome subunit RPN11 (RPN11) mRNA, RPN11-2 allele, complete cds Length = 1199 Score = 210 bits (106), Expect = 4e-51 Identities = 385/478 (80%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| |||||||| || ||||| |||||||||||||| |||||||| || || || Sbjct: 148 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacggaagagctggt 207 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 || || ||||| || ||||| ||||||| || ||||| || || || ||||| || ||| Sbjct: 208 gttcctatggaagtcatgggattgatgcttggagagtttgtggatgagtacactgttagg 267 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 || |||||||| || || ||||| ||||| || || || || || || || || || || Sbjct: 268 gttgtggatgtttttgcgatgcctcagagtggtactggtgttagtgttgaagctgttgat 327 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 || || |||||||| || |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 328 catgttttccagactaatatgctcgacatgcttaaacagaccggaagacctgagatggtg 387 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || || ||||| || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 388 gttggttggtatcattcacatcctggattcggctgctggctttctggggttgacattaat 447 Query: 397 actcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatc 456 ||||| |||||||||||||| || || | | || || || || ||| ||||||| || Sbjct: 448 actcaacagagttttgaagctttgaatcagcgagctgtagcagtggtggtagatccgatt 507 Query: 457 cagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatg 516 |||||||| || || || ||||| |||||||| ||||| ||| || || |||||||| Sbjct: 508 cagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatccacagaccatt 567 Query: 517 atgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 |||||||| ||||| || || || ||||||||||| |||||||| | |||||||||| Sbjct: 568 atgcttgggcaggaaccccgtcaaacaacatcgaaccttgggcacttgaacaaaccat 625
>gb|AY230844.1| Arabidopsis thaliana 26S proteasome subunit RPN11a (RPN11a) mRNA, RPN11a-1 allele, complete cds Length = 1163 Score = 210 bits (106), Expect = 4e-51 Identities = 385/478 (80%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| |||||||| || ||||| |||||||||||||| |||||||| || || || Sbjct: 139 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacggaagagctggt 198 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 || || ||||| || ||||| ||||||| || ||||| || || || ||||| || ||| Sbjct: 199 gttcctatggaagtcatgggattgatgcttggagagtttgtggatgaatacactgttagg 258 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 || |||||||| || || ||||| ||||| || || || || || || || || || || Sbjct: 259 gttgtggatgtttttgcgatgcctcagagtggtactggtgttagtgttgaagctgttgat 318 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 || || |||||||| || |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 319 catgttttccagactaatatgctcgacatgcttaaacagaccggaagacctgagatggtg 378 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || || ||||| || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 379 gttggttggtatcattcacatcctggattcggctgctggctttctggggttgacattaat 438 Query: 397 actcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatc 456 ||||| |||||||||||||| || || | | || || || || ||| ||||||| || Sbjct: 439 actcaacagagttttgaagctttgaatcagcgagctgtagcagtggtggtagatccgatt 498 Query: 457 cagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatg 516 |||||||| || || || ||||| |||||||| ||||| ||| || || |||||||| Sbjct: 499 cagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatccacagaccatt 558 Query: 517 atgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 |||||||| ||||| || || || ||||||||||| |||||||| | |||||||||| Sbjct: 559 atgcttgggcaggaaccccgtcaaacaacatcgaaccttgggcacttgaacaaaccat 616
>gb|AY230843.1| Arabidopsis thaliana 26S proteasome subunit RPN11A (RPN11a) mRNA, RPN11a-1 allele, complete cds Length = 1235 Score = 210 bits (106), Expect = 4e-51 Identities = 385/478 (80%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| |||||||| || ||||| |||||||||||||| |||||||| || || || Sbjct: 172 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacggaagagctggt 231 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 || || ||||| || ||||| ||||||| || ||||| || || || ||||| || ||| Sbjct: 232 gttcctatggaagtcatgggattgatgcttggagagtttgtggatgaatacactgttagg 291 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 || |||||||| || || ||||| ||||| || || || || || || || || || || Sbjct: 292 gttgtggatgtttttgcgatgcctcagagtggtactggtgttagtgttgaagctgttgat 351 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 || || |||||||| || |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 352 catgttttccagactaatatgctcgacatgcttaaacagaccggaagacctgagatggtg 411 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || || ||||| || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 412 gttggttggtatcattcacatcctggattcggctgctggctttctggggttgacattaat 471 Query: 397 actcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatc 456 ||||| |||||||||||||| || || | | || || || || ||| ||||||| || Sbjct: 472 actcaacagagttttgaagctttgaatcagcgagctgtagcagtggtggtagatccgatt 531 Query: 457 cagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatg 516 |||||||| || || || ||||| |||||||| ||||| ||| || || |||||||| Sbjct: 532 cagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatccacagaccatt 591 Query: 517 atgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 |||||||| ||||| || || || ||||||||||| |||||||| | |||||||||| Sbjct: 592 atgcttgggcaggaaccccgtcaaacaacatcgaaccttgggcacttgaacaaaccat 649
>gb|AY091329.1| Arabidopsis thaliana putative 26S proteasome, non-ATPase regulatory subunit (At5g23540) mRNA, complete cds Length = 958 Score = 210 bits (106), Expect = 4e-51 Identities = 385/478 (80%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| |||||||| || ||||| |||||||||||||| |||||||| || || || Sbjct: 82 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacggaagagctggt 141 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 || || ||||| || ||||| ||||||| || ||||| || || || ||||| || ||| Sbjct: 142 gttcctatggaagtcatgggattgatgcttggagagtttgtggatgaatacactgttagg 201 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 || |||||||| || || ||||| ||||| || || || || || || || || || || Sbjct: 202 gttgtggatgtttttgcgatgcctcagagtggtactggtgttagtgttgaagctgttgat 261 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 || || |||||||| || |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 262 catgttttccagactaatatgctcgacatgcttaaacagaccggaagacctgagatggtg 321 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || || ||||| || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 322 gttggttggtatcattcacatcctggattcggctgctggctttctggggttgacattaat 381 Query: 397 actcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatc 456 ||||| |||||||||||||| || || | | || || || || ||| ||||||| || Sbjct: 382 actcaacagagttttgaagctttgaatcagcgagctgtagcagtggtggtagatccgatt 441 Query: 457 cagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatg 516 |||||||| || || || ||||| |||||||| ||||| ||| || || |||||||| Sbjct: 442 cagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatccacagaccatt 501 Query: 517 atgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 |||||||| ||||| || || || ||||||||||| |||||||| | |||||||||| Sbjct: 502 atgcttgggcaggaaccccgtcaaacaacatcgaaccttgggcacttgaacaaaccat 559
>gb|AY070073.1| Arabidopsis thaliana putative 26S proteasome, non-ATPase regulatory subunit (At5g23540) mRNA, complete cds Length = 1227 Score = 210 bits (106), Expect = 4e-51 Identities = 385/478 (80%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| |||||||| || ||||| |||||||||||||| |||||||| || || || Sbjct: 128 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacggaagagctggt 187 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 || || ||||| || ||||| ||||||| || ||||| || || || ||||| || ||| Sbjct: 188 gttcctatggaagtcatgggattgatgcttggagagtttgtggatgaatacactgttagg 247 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 || |||||||| || || ||||| ||||| || || || || || || || || || || Sbjct: 248 gttgtggatgtttttgcgatgcctcagagtggtactggtgttagtgttgaagctgttgat 307 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 || || |||||||| || |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 308 catgttttccagactaatatgctcgacatgcttaaacagaccggaagacctgagatggtg 367 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || || ||||| || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 368 gttggttggtatcattcacatcctggattcggctgctggctttctggggttgacattaat 427 Query: 397 actcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatc 456 ||||| |||||||||||||| || || | | || || || || ||| ||||||| || Sbjct: 428 actcaacagagttttgaagctttgaatcagcgagctgtagcagtggtggtagatccgatt 487 Query: 457 cagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatg 516 |||||||| || || || ||||| |||||||| ||||| ||| || || |||||||| Sbjct: 488 cagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatccacagaccatt 547 Query: 517 atgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 |||||||| ||||| || || || ||||||||||| |||||||| | |||||||||| Sbjct: 548 atgcttgggcaggaaccccgtcaaacaacatcgaaccttgggcacttgaacaaaccat 605
>emb|BX830953.1|CNS09YRU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 898 Score = 210 bits (106), Expect = 4e-51 Identities = 385/478 (80%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| |||||||| || ||||| |||||||||||||| |||||||| || || || Sbjct: 122 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacggaagagctggt 181 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 || || ||||| || ||||| ||||||| || ||||| || || || ||||| || ||| Sbjct: 182 gttcctatggaagtcatgggattgatgcttggagagtttgtggatgaatacactgttagg 241 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 || |||||||| || || ||||| ||||| || || || || || || || || || || Sbjct: 242 gttgtggatgtttttgcgatgcctcagagtggtactggtgttagtgttgaagctgttgat 301 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 || || |||||||| || |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 302 catgttttccagactaatatgctcgacatgcttaaacagaccggaagacctgagatggtg 361 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || || ||||| || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 362 gttggttggtatcattcacatcctggattcggctgctggctttctggggttgacattaat 421 Query: 397 actcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatc 456 ||||| |||||||||||||| || || | | || || || || ||| ||||||| || Sbjct: 422 actcaacagagttttgaagctttgaatcagcgagctgtagcagtggtggtagatccgatt 481 Query: 457 cagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatg 516 |||||||| || || || ||||| |||||||| ||||| ||| || || |||||||| Sbjct: 482 cagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatccacagaccatt 541 Query: 517 atgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 |||||||| ||||| || || || ||||||||||| |||||||| | |||||||||| Sbjct: 542 atgcttgggcaggaaccccgtcaaacaacatcgaaccttgggcacttgaacaaaccat 599
>gb|AY086277.1| Arabidopsis thaliana clone 23276 mRNA, complete sequence Length = 1185 Score = 202 bits (102), Expect = 9e-49 Identities = 384/478 (80%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| |||||||| || ||||| |||||||||||||| |||||||| || || || Sbjct: 188 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacggaagagctggt 247 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 || || ||||| || ||||| ||||||| || ||||| || || || ||||| || ||| Sbjct: 248 gttcctatggaagtcatgggattgatgcttggagagtttgtggatgagtacactgttagg 307 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 || |||||||| || || ||||| ||||| || || || || || || || || || || Sbjct: 308 gttgtggatgtttttgcgatgcctcagagtggtactggtgttagtgttgaagctgttgat 367 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 || || |||||||| || |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 368 catgttttccagactaatatgctcgacatgcttaaacagaccggaagacctgagatggtg 427 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || || ||||| || || ||||||||||| || ||||||||||| || |||||||| ||| Sbjct: 428 gttggttggtatcattcacatcctggattcggctgctggctttctggggttgacattaat 487 Query: 397 actcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgatagatcccatc 456 ||||| |||||||||||||| || || | | || || || || ||| ||||||| || Sbjct: 488 actcaacagagttttgaagctttgaatcagcgagctgtagcagtggtggtagatccgatt 547 Query: 457 cagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatg 516 |||||||| || || || ||||| |||||||| ||||| ||| || || |||||||| Sbjct: 548 cagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatccacagaccatt 607 Query: 517 atgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 |||||||| || || || || || ||||||||||| |||||||| | |||||||||| Sbjct: 608 atgcttgggcacgaaccccgtcaaacaacatcgaaccttgggcacttgaacaaaccat 665
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 194 bits (98), Expect = 2e-46 Identities = 203/238 (85%) Strand = Plus / Minus Query: 116 ccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggaggtgatgg 175 |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 29196476 ccctcgccctcctcaagatgctcaagcacgggcgagccggcgtgccgatggaggtgatgg 29196417 Query: 176 gcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtcttcgcca 235 | |||||||||||||||||||||||||| |||||||| | ||| | || || ||||||| Sbjct: 29196416 ggctgatgctgggcgagttcgtcgacgagtacacggtgacggtcgccgacgtgttcgcca 29196357 Query: 236 tgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccagaccaaca 295 ||||||||||||| ||||| || ||||| ||||| || ||||||| ||||||| | | | Sbjct: 29196356 tgccgcagagcggcaccggcgtgagcgtggaggcggtggaccacgcgttccagagcgaga 29196297 Query: 296 tgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactc 353 |||| || |||||| |||||| || | || || |||||||| || ||||||||||| Sbjct: 29196296 tgctggagatgctccggcagacggggcggccggagatggtggtggggtggtaccactc 29196239
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 194 bits (98), Expect = 2e-46 Identities = 203/238 (85%) Strand = Plus / Minus Query: 116 ccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggaggtgatgg 175 |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 63763 ccctcgccctcctcaagatgctcaagcacgggcgagccggcgtgccgatggaggtgatgg 63704 Query: 176 gcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtcttcgcca 235 | |||||||||||||||||||||||||| |||||||| | ||| | || || ||||||| Sbjct: 63703 ggctgatgctgggcgagttcgtcgacgagtacacggtgacggtcgccgacgtgttcgcca 63644 Query: 236 tgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccagaccaaca 295 ||||||||||||| ||||| || ||||| ||||| || ||||||| ||||||| | | | Sbjct: 63643 tgccgcagagcggcaccggcgtgagcgtggaggcggtggaccacgcgttccagagcgaga 63584 Query: 296 tgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactc 353 |||| || |||||| |||||| || | || || |||||||| || ||||||||||| Sbjct: 63583 tgctggagatgctccggcagacggggcggccggagatggtggtggggtggtaccactc 63526
>dbj|AK112072.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G01, full insert sequence Length = 1137 Score = 194 bits (98), Expect = 2e-46 Identities = 203/238 (85%) Strand = Plus / Minus Query: 116 ccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggaggtgatgg 175 |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 799 ccctcgccctcctcaagatgctcaagcacgggcgagccggcgtgccgatggaggtgatgg 740 Query: 176 gcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtcttcgcca 235 | |||||||||||||||||||||||||| |||||||| | ||| | || || ||||||| Sbjct: 739 ggctgatgctgggcgagttcgtcgacgagtacacggtgacggtcgccgacgtgttcgcca 680 Query: 236 tgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccagaccaaca 295 ||||||||||||| ||||| || ||||| ||||| || ||||||| ||||||| | | | Sbjct: 679 tgccgcagagcggcaccggcgtgagcgtggaggcggtggaccacgcgttccagagcgaga 620 Query: 296 tgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactc 353 |||| || |||||| |||||| || | || || |||||||| || ||||||||||| Sbjct: 619 tgctggagatgctccggcagacggggcggccggagatggtggtggggtggtaccactc 562
>dbj|AK110999.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-E09, full insert sequence Length = 1274 Score = 194 bits (98), Expect = 2e-46 Identities = 203/238 (85%) Strand = Plus / Plus Query: 116 ccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggaggtgatgg 175 |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 239 ccctcgccctcctcaagatgctcaagcacgggcgagccggcgtgccgatggaggtgatgg 298 Query: 176 gcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtcttcgcca 235 | |||||||||||||||||||||||||| |||||||| | ||| | || || ||||||| Sbjct: 299 ggctgatgctgggcgagttcgtcgacgagtacacggtgacggtcgccgacgtgttcgcca 358 Query: 236 tgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttccagaccaaca 295 ||||||||||||| ||||| || ||||| ||||| || ||||||| ||||||| | | | Sbjct: 359 tgccgcagagcggcaccggcgtgagcgtggaggcggtggaccacgcgttccagagcgaga 418 Query: 296 tgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactc 353 |||| || |||||| |||||| || | || || |||||||| || ||||||||||| Sbjct: 419 tgctggagatgctccggcagacggggcggccggagatggtggtggggtggtaccactc 476
>gb|BT013130.1| Lycopersicon esculentum clone 114422R, mRNA sequence Length = 1181 Score = 188 bits (95), Expect = 1e-44 Identities = 389/487 (79%) Strand = Plus / Plus Query: 88 gactcctccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacggg 147 ||||| || ||||| ||||||||||| || || |||||||| |||||||| || |||||| Sbjct: 150 gactcttctgagcaagtctacatctcttctcttgccctcctaaagatgcttaaacacggg 209 Query: 148 agggccggcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactac 207 ||||| || || || |||||||||||||| ||||| | || || |||||||| || || Sbjct: 210 agggctggagttcctatggaggtgatgggattgatgttaggggatttcgtcgatgagtat 269 Query: 208 acggtcagggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgag 267 || || | || || ||||| || || ||||| ||||| || || || || || || || Sbjct: 270 acagtgcgtgtagttgatgtgtttgcaatgcctcagagtggtactggtgtgagtgttgaa 329 Query: 268 gccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacct 327 || || || || || || || ||||| ||||| |||||||||||||| || || |||||| Sbjct: 330 gctgttgatcatgtttttcaaaccaatatgcttgacatgctcaagcaaactgggagacct 389 Query: 328 gaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagtt 387 || ||||| || || ||||| ||||| |||||||||||||| ||||||||||| || ||| Sbjct: 390 gagatggttgttggttggtatcactcacatcctggatttggctgctggctttctggtgtt 449 Query: 388 gacatcaatactcagcagagttttgaagcgttaaaccccagggcagttgctgttgtgata 447 ||||||||||| ||||||||||||||||| | || | | ||||| ||||| ||| | Sbjct: 450 gacatcaatacacagcagagttttgaagcactgaatcaacgagcagtggctgtggtggtg 509 Query: 448 gatcccatccagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaaccct 507 ||||| || |||||||| || ||||| ||||| |||||||| || || | || || || Sbjct: 510 gatcctattcagagtgttaaagggaaggtggtaattgatgcctttcgcttgatcaatccc 569 Query: 508 cagaccatgatgcttggccaggagccacggcagacaacatcgaatgttgggcacctaaac 567 || || |||||||||||||| |||||||| ||||||||||| ||| | || || || ||| Sbjct: 570 caaactatgatgcttggccaagagccacgtcagacaacatcaaatctgggacatctgaac 629 Query: 568 aaaccat 574 ||||||| Sbjct: 630 aaaccat 636
>emb|AM260494.1| Platanus acerifolia partial mRNA for 26S proteasome subunit 11 (26S-11 gene) Length = 846 Score = 182 bits (92), Expect = 8e-43 Identities = 264/320 (82%), Gaps = 1/320 (0%) Strand = Plus / Plus Query: 256 gtcagcgtcgaggccgtcgaccacgtcttcc-agaccaacatgctcgacatgctcaagca 314 ||||| ||||||||||| || || ||||||| |||| || |||||||| ||||||||||| Sbjct: 7 gtcagtgtcgaggccgttgatcatgtcttcccagactaatatgctcgatatgctcaagca 66 Query: 315 gaccggaagacctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctg 374 || || ||||| || ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 67 aactggtagaccagagatggtggtaggatggtatcattcacatcctggatttggctgctg 126 Query: 375 gctttcaggagttgacatcaatactcagcagagttttgaagcgttaaaccccagggcagt 434 |||||| || || || || ||||| || ||||| |||||||| |||| | | || || Sbjct: 127 gctttcgggtgtggatattaatacacaacagagctttgaagctctaaatcaacgagctgt 186 Query: 435 tgctgttgtgatagatcccatccagagtgtcaaggggaaagtggtcattgatgcattccg 494 ||| | |||| | || || ||||||||||| || || || ||||| |||||||| ||||| Sbjct: 187 tgcagctgtggttgacccaatccagagtgtaaaaggaaaggtggttattgatgccttccg 246 Query: 495 tctcattaaccctcagaccatgatgcttggccaggagccacggcagacaacatcgaatgt 554 | |||||||| || |||||||||| |||||| |||||||||||||||||||| ||||| Sbjct: 247 attgattaacccacaaaccatgatgcctggccaagagccacggcagacaacatccaatgt 306 Query: 555 tgggcacctaaacaaaccat 574 |||||| || |||||||||| Sbjct: 307 tgggcatctgaacaaaccat 326
>ref|NM_135061.2| Drosophila melanogaster Rpn11 CG18174-RA (Rpn11), mRNA Length = 1242 Score = 178 bits (90), Expect = 1e-41 Identities = 255/310 (82%) Strand = Plus / Plus Query: 95 ccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccg 154 |||||||||| |||||||| ||| | ||||| ||||||||||| |||||||| |||||| Sbjct: 273 ccgagcaggtgtacatctcgtccttggccctgctcaagatgcttaagcacggacgggccg 332 Query: 155 gcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtca 214 |||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||| Sbjct: 333 gcgtgcccatggaggtgatgggtctgatgttgggcgaattcgtggacgactacacggtgc 392 Query: 215 gggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcg 274 ||| | ||||| |||||||||||||| | || || || || ||| |||||||| | Sbjct: 393 aggtcatcgatgtgttcgccatgccgcaaacgggtactggagtatccgtagaggccgtgg 452 Query: 275 accacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatgg 334 | | |||||| ||| | || ||| | |||||||| |||||||| || |||| ||||||| Sbjct: 453 atcccgtctttcaggcgaagatgttggacatgctgaagcagacgggtcgacccgaaatgg 512 Query: 335 tggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatca 394 | || |||||||| ||||||||||| || || || |||||||| || || || ||||||| Sbjct: 513 tcgtcggctggtatcactcgcatcccggtttcggctgctggctgtccggcgtggacatca 572 Query: 395 atactcagca 404 |||| ||||| Sbjct: 573 atacgcagca 582 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 448 gatcccatccagagtgtcaaggggaaagtggtcattgatgcattccg 494 |||||||| ||| ||||||||| ||||||||||| ||||| ||||| Sbjct: 626 gatcccattcagtctgtcaagggcaaagtggtcatcgatgccttccg 672
>gb|AY070977.1| Drosophila melanogaster RE07468 full length cDNA Length = 1249 Score = 178 bits (90), Expect = 1e-41 Identities = 255/310 (82%) Strand = Plus / Plus Query: 95 ccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccg 154 |||||||||| |||||||| ||| | ||||| ||||||||||| |||||||| |||||| Sbjct: 273 ccgagcaggtgtacatctcgtccttggccctgctcaagatgcttaagcacggacgggccg 332 Query: 155 gcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtca 214 |||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||| Sbjct: 333 gcgtgcccatggaggtgatgggtctgatgttgggcgaattcgtggacgactacacggtgc 392 Query: 215 gggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcg 274 ||| | ||||| |||||||||||||| | || || || || ||| |||||||| | Sbjct: 393 aggtcatcgatgtgttcgccatgccgcaaacgggtactggagtatccgtagaggccgtgg 452 Query: 275 accacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatgg 334 | | |||||| ||| | || ||| | |||||||| |||||||| || |||| ||||||| Sbjct: 453 atcccgtctttcaggcgaagatgttggacatgctgaagcagacgggtcgacccgaaatgg 512 Query: 335 tggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatca 394 | || |||||||| ||||||||||| || || || |||||||| || || || ||||||| Sbjct: 513 tcgtcggctggtatcactcgcatcccggtttcggctgctggctgtccggcgtggacatca 572 Query: 395 atactcagca 404 |||| ||||| Sbjct: 573 atacgcagca 582 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 448 gatcccatccagagtgtcaaggggaaagtggtcattgatgcattccg 494 |||||||| ||| ||||||||| ||||||||||| ||||| ||||| Sbjct: 626 gatcccattcagtctgtcaagggcaaagtggtcatcgatgccttccg 672
>gb|AC008233.3|AC008233 Drosophila melanogaster, chromosome 2L, region 25C-25C, BAC clone BACR13M11, complete sequence Length = 162387 Score = 178 bits (90), Expect = 1e-41 Identities = 255/310 (82%) Strand = Plus / Minus Query: 95 ccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccg 154 |||||||||| |||||||| ||| | ||||| ||||||||||| |||||||| |||||| Sbjct: 115777 ccgagcaggtgtacatctcgtccttggccctgctcaagatgcttaagcacggacgggccg 115718 Query: 155 gcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtca 214 |||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||| Sbjct: 115717 gcgtgcccatggaggtgatgggtctgatgttgggcgaattcgtggacgactacacggtgc 115658 Query: 215 gggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcg 274 ||| | ||||| |||||||||||||| | || || || || ||| |||||||| | Sbjct: 115657 aggtcatcgatgtgttcgccatgccgcaaacgggtactggagtatccgtagaggccgtgg 115598 Query: 275 accacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatgg 334 | | |||||| ||| | || ||| | |||||||| |||||||| || |||| ||||||| Sbjct: 115597 atcccgtctttcaggcgaagatgttggacatgctgaagcagacgggtcgacccgaaatgg 115538 Query: 335 tggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatca 394 | || |||||||| ||||||||||| || || || |||||||| || || || ||||||| Sbjct: 115537 tcgtcggctggtatcactcgcatcccggtttcggctgctggctgtccggcgtggacatca 115478 Query: 395 atactcagca 404 |||| ||||| Sbjct: 115477 atacgcagca 115468 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 448 gatcccatccagagtgtcaaggggaaagtggtcattgatgcattccg 494 |||||||| ||| ||||||||| ||||||||||| ||||| ||||| Sbjct: 115424 gatcccattcagtctgtcaagggcaaagtggtcatcgatgccttccg 115378
>gb|AF145313.1|AF145313 Drosophila melanogaster 26S proteasome regulatory complex subunit p37B mRNA, complete cds Length = 927 Score = 178 bits (90), Expect = 1e-41 Identities = 255/310 (82%) Strand = Plus / Plus Query: 95 ccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccg 154 |||||||||| |||||||| ||| | ||||| ||||||||||| |||||||| |||||| Sbjct: 77 ccgagcaggtgtacatctcgtccttggccctgctcaagatgcttaagcacggacgggccg 136 Query: 155 gcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtca 214 |||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||| Sbjct: 137 gcgtgcccatggaggtgatgggtctgatgttgggcgaattcgtggacgactacacggtgc 196 Query: 215 gggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcg 274 ||| | ||||| |||||||||||||| | || || || || ||| |||||||| | Sbjct: 197 aggtcatcgatgtgttcgccatgccgcaaacgggtactggagtatccgtagaggccgtgg 256 Query: 275 accacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatgg 334 | | |||||| ||| | || ||| | |||||||| |||||||| || |||| ||||||| Sbjct: 257 atcccgtctttcaggcgaagatgttggacatgctgaagcagacgggtcgacccgaaatgg 316 Query: 335 tggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatca 394 | || |||||||| ||||||||||| || || || |||||||| || || || ||||||| Sbjct: 317 tcgtcggctggtatcactcgcatcccggtttcggctgctggctgtccggcgtggacatca 376 Query: 395 atactcagca 404 |||| ||||| Sbjct: 377 atacgcagca 386 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 448 gatcccatccagagtgtcaaggggaaagtggtcattgatgcattccg 494 |||||||| ||| ||||||||| ||||||||||| ||||| ||||| Sbjct: 430 gatcccattcagtctgtcaagggcaaagtggtcatcgatgccttccg 476
>gb|AE003608.5| Drosophila melanogaster chromosome 2L, section 17 of 83 of the complete sequence Length = 174887 Score = 178 bits (90), Expect = 1e-41 Identities = 255/310 (82%) Strand = Plus / Minus Query: 95 ccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccg 154 |||||||||| |||||||| ||| | ||||| ||||||||||| |||||||| |||||| Sbjct: 118050 ccgagcaggtgtacatctcgtccttggccctgctcaagatgcttaagcacggacgggccg 117991 Query: 155 gcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtca 214 |||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||| Sbjct: 117990 gcgtgcccatggaggtgatgggtctgatgttgggcgaattcgtggacgactacacggtgc 117931 Query: 215 gggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcg 274 ||| | ||||| |||||||||||||| | || || || || ||| |||||||| | Sbjct: 117930 aggtcatcgatgtgttcgccatgccgcaaacgggtactggagtatccgtagaggccgtgg 117871 Query: 275 accacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatgg 334 | | |||||| ||| | || ||| | |||||||| |||||||| || |||| ||||||| Sbjct: 117870 atcccgtctttcaggcgaagatgttggacatgctgaagcagacgggtcgacccgaaatgg 117811 Query: 335 tggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatca 394 | || |||||||| ||||||||||| || || || |||||||| || || || ||||||| Sbjct: 117810 tcgtcggctggtatcactcgcatcccggtttcggctgctggctgtccggcgtggacatca 117751 Query: 395 atactcagca 404 |||| ||||| Sbjct: 117750 atacgcagca 117741 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 448 gatcccatccagagtgtcaaggggaaagtggtcattgatgcattccg 494 |||||||| ||| ||||||||| ||||||||||| ||||| ||||| Sbjct: 117697 gatcccattcagtctgtcaagggcaaagtggtcatcgatgccttccg 117651
>ref|XM_752595.1| Ustilago maydis 521 hypothetical protein (UM01541.1) partial mRNA Length = 864 Score = 155 bits (78), Expect = 2e-34 Identities = 222/270 (82%) Strand = Plus / Plus Query: 102 ggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcc 161 |||||||||||| || ||||| ||| ||||||||||||||||||| | || || || || Sbjct: 66 ggtctacatctcatcgctcgcgctcatcaagatgctcaagcacggtcgagcaggtgtacc 125 Query: 162 catggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggt 221 |||||||||||||| || ||||| ||| |||| ||||||||||||| ||| |||| | Sbjct: 126 gatggaggtgatgggactcatgctcggctcgttcatcgacgactacactgtctcggtgat 185 Query: 222 ggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgt 281 || || ||||||||||| ||| ||| ||||| || || || |||||||||| || Sbjct: 186 tgacgttttcgccatgcctcagtccggaaccggtgtgtcggtagaagccgtcgaccctgt 245 Query: 282 cttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtagg 341 ||||| || || ||||||||||||||||||||||||||| | || || |||||||| || Sbjct: 246 tttccaaacaaaaatgctcgacatgctcaagcagaccggacgtcccgagatggtggtggg 305 Query: 342 ctggtaccactcgcatcctggatttggttg 371 ||||||||| |||||||| ||||||||||| Sbjct: 306 ctggtaccattcgcatcccggatttggttg 335
>emb|AJ249917.1|SDO249917 Aphrocallistes vastus mRNA for putative multidrug resistance protein (pohl gene) Length = 1068 Score = 149 bits (75), Expect = 1e-32 Identities = 252/311 (81%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| ||||| ||||| ||||| || || || ||||| || ||||| ||||| || Sbjct: 125 gagcaggtgtacatatcctcactcgcactgctgaaaatgctgaaacacggtagggctggg 184 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 ||||| |||||||| ||||| |||||| | || || ||||| ||||||||||| |||| Sbjct: 185 gtgccaatggaggtcatggggctgatgttaggagatttcgttgacgactacaccgtcaaa 244 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 ||| | ||||||||||| ||||| || || || |||||||| ||||| || || ||| Sbjct: 245 gtgatcgatgtcttcgcgatgcctcaatcaggcacgggggtcagtgtcgaagcggtggac 304 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 | ||||||||| | || ||||| |||||||| |||||||| ||| | |||||||||||| Sbjct: 305 cccgtcttccaagcgaagatgctagacatgctgaagcagacgggacggcctgaaatggtg 364 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || |||||||||||||| ||||||||||| || || ||||| || || || || ||||| Sbjct: 365 gtcggctggtaccactcacatcctggattcgggtgttggctctccggggtggatatcaac 424 Query: 397 actcagcagag 407 || |||||||| Sbjct: 425 acccagcagag 435
>emb|AJ245813.1|AVA245813 Aphrocallistes vastus mRNA for potential multidrug resistance protein (POHL gene) Length = 1068 Score = 149 bits (75), Expect = 1e-32 Identities = 252/311 (81%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggc 156 |||||||| ||||| ||||| ||||| || || || ||||| || ||||| ||||| || Sbjct: 125 gagcaggtgtacatatcctcactcgcactgctgaaaatgctgaaacacggtagggctggg 184 Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 ||||| |||||||| ||||| |||||| | || || ||||| ||||||||||| |||| Sbjct: 185 gtgccaatggaggtcatggggctgatgttaggagatttcgttgacgactacaccgtcaaa 244 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 ||| | ||||||||||| ||||| || || || |||||||| ||||| || || ||| Sbjct: 245 gtgatcgatgtcttcgcgatgcctcaatcaggcacgggggtcagtgtcgaagcggtggac 304 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 | ||||||||| | || ||||| |||||||| |||||||| ||| | |||||||||||| Sbjct: 305 cccgtcttccaagcgaagatgctagacatgctgaagcagacgggacggcctgaaatggtg 364 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaat 396 || |||||||||||||| ||||||||||| || || ||||| || || || || ||||| Sbjct: 365 gtcggctggtaccactcacatcctggattcgggtgttggctctccggggtggatatcaac 424 Query: 397 actcagcagag 407 || |||||||| Sbjct: 425 acccagcagag 435
>ref|XM_380957.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG00781.1) partial mRNA Length = 1014 Score = 139 bits (70), Expect = 1e-29 Identities = 226/278 (81%) Strand = Plus / Plus Query: 103 gtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgccc 162 ||||||||||||||||||||||||||||| ||||| ||||| | || || |||||| Sbjct: 100 gtctacatctcctccctcgccctcctcaaaatgcttcgacacggccgcgcaggtgtgccc 159 Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtg 222 ||||| || ||||| |||||||||||||||||||| ||||||| || |||| ||| || Sbjct: 160 atggaagtcatgggtctgatgctgggcgagttcgtggacgactttaccgtcaaggttatg 219 Query: 223 gatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtc 282 ||||| || |||||||| ||||| || ||||| || || |||||||||||||| | || Sbjct: 220 gatgtgtttgccatgccccagagtggtaccggtgttagtgtcgaggccgtcgatcctgtt 279 Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggc 342 |||||||| || ||| | || ||||| ||||| |||||||| || ||| || || Sbjct: 280 ttccagacgaagatgatggatatgcttcgacagacaggaagacccgagtcggttgtcgga 339 Query: 343 tggtaccactcgcatcctggatttggttgctggctttc 380 ||||||||||||||||| || || |||||||||||||| Sbjct: 340 tggtaccactcgcatcccggtttcggttgctggctttc 377
>ref|XM_959273.1| Neurospora crassa OR74A hypothetical protein (NCU00823.1) partial mRNA Length = 1263 Score = 131 bits (66), Expect = 3e-27 Identities = 225/278 (80%) Strand = Plus / Plus Query: 103 gtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgccc 162 |||||||| |||||||| ||||||||||||||| | ||||| | || || |||||| Sbjct: 346 gtctacatttcctccctagccctcctcaagatgttgcgccacggtcgcgctggtgtgccc 405 Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtg 222 ||||| || ||||||||||||||||||||||| ||||| |||| || || | || || Sbjct: 406 atggaagtcatgggcctgatgctgggcgagtttgtcgatgactttaccgttcgcgtcgtc 465 Query: 223 gatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtc 282 ||||| || |||||||| || ||||| || || ||||| || ||||| ||||||| |||| Sbjct: 466 gatgtgtttgccatgccccaaagcggtactggtgtcagtgtagaggctgtcgaccccgtc 525 Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggc 342 ||||||| |||||| | |||||||||| ||| || ||||| || || || || ||| Sbjct: 526 ttccagatgaacatgatggacatgctcaggcaaacgggaaggcccgaggccgtcgttggc 585 Query: 343 tggtaccactcgcatcctggatttggttgctggctttc 380 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 586 tggtaccactcgcatcccggttttggctgctggctttc 623 Score = 44.1 bits (22), Expect = 0.50 Identities = 70/86 (81%) Strand = Plus / Plus Query: 463 gtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgctt 522 |||||||| || || || |||||||| ||||||||||| ||||| ||| | | ||||| Sbjct: 706 gtcaagggcaaggttgtgattgatgctttccgtctcatcaacccccagtcgctcatgctg 765 Query: 523 ggccaggagccacggcagacaacatc 548 || |||||||| || ||||| ||||| Sbjct: 766 ggtcaggagccccgccagacgacatc 791
>ref|XM_325002.1| Neurospora crassa OR74A hypothetical protein (NCU00823.1) partial mRNA Length = 1263 Score = 131 bits (66), Expect = 3e-27 Identities = 225/278 (80%) Strand = Plus / Plus Query: 103 gtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgccc 162 |||||||| |||||||| ||||||||||||||| | ||||| | || || |||||| Sbjct: 346 gtctacatttcctccctagccctcctcaagatgttgcgccacggtcgcgctggtgtgccc 405 Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtg 222 ||||| || ||||||||||||||||||||||| ||||| |||| || || | || || Sbjct: 406 atggaagtcatgggcctgatgctgggcgagtttgtcgatgactttaccgttcgcgtcgtc 465 Query: 223 gatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtc 282 ||||| || |||||||| || ||||| || || ||||| || ||||| ||||||| |||| Sbjct: 466 gatgtgtttgccatgccccaaagcggtactggtgtcagtgtagaggctgtcgaccccgtc 525 Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggc 342 ||||||| |||||| | |||||||||| ||| || ||||| || || || || ||| Sbjct: 526 ttccagatgaacatgatggacatgctcaggcaaacgggaaggcccgaggccgtcgttggc 585 Query: 343 tggtaccactcgcatcctggatttggttgctggctttc 380 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 586 tggtaccactcgcatcccggttttggctgctggctttc 623 Score = 44.1 bits (22), Expect = 0.50 Identities = 70/86 (81%) Strand = Plus / Plus Query: 463 gtcaaggggaaagtggtcattgatgcattccgtctcattaaccctcagaccatgatgctt 522 |||||||| || || || |||||||| ||||||||||| ||||| ||| | | ||||| Sbjct: 706 gtcaagggcaaggttgtgattgatgctttccgtctcatcaacccccagtcgctcatgctg 765 Query: 523 ggccaggagccacggcagacaacatc 548 || |||||||| || ||||| ||||| Sbjct: 766 ggtcaggagccccgccagacgacatc 791
>ref|NM_062311.2| Caenorhabditis elegans proteasome Regulatory Particle, Non-ATPase-like family member (rpn-11) (rpn-11) mRNA, complete cds Length = 1108 Score = 127 bits (64), Expect = 4e-26 Identities = 223/276 (80%) Strand = Plus / Plus Query: 130 aagatgctcaagcacgggagggccggcgtgcccatggaggtgatgggcctgatgctgggc 189 ||||||||||| ||||| || ||||| || |||||||| |||||||| |||||||| || Sbjct: 137 aagatgctcaaacacggaagagccggagttcccatggaagtgatggggctgatgcttgga 196 Query: 190 gagttcgtcgacgactacacggtcagggtggtggatgtcttcgccatgccgcagagcggg 249 || ||||||||||||||||| |||| ||| | || || ||||| ||||| ||| || Sbjct: 197 gaattcgtcgacgactacaccgtcaatgtgatcgacgttttcgctatgccacagtctgga 256 Query: 250 accggggtcagcgtcgaggccgtcgaccacgtcttccagaccaacatgctcgacatgctc 309 ||||| ||| ||||| || ||||| | || |||||| | || ||||||||||||||| Sbjct: 257 accggagtctcagtcgaagcggtcgatccagtattccaggcgaagatgctcgacatgctc 316 Query: 310 aagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctggatttggt 369 || |||||||||||||| || ||||| || || |||||||| || ||||| ||||| || Sbjct: 317 aaacagaccggaagacccgagatggtcgtcggatggtaccattcccatccaggattcgga 376 Query: 370 tgctggctttcaggagttgacatcaatactcagcag 405 || ||||| || || || |||||||| ||||||||| Sbjct: 377 tgttggctctccggcgtcgacatcaacactcagcag 412
>gb|BT018364.1| Zea mays clone EL01N0311E01.c mRNA sequence Length = 603 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 484 gatgcattccgtctcattaaccctcagaccatgatgcttggccaggagccacggcagaca 543 ||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 8 gatgcattccgcctaattaatcctcagaccatgatgcttggtcaggagccacggcagacg 67 Query: 544 acatcgaatgttgggcacctaaa 566 ||||| ||||||||||||||||| Sbjct: 68 acatcaaatgttgggcacctaaa 90
>ref|XM_961333.1| PREDICTED: Tribolium castaneum similar to CG18174-PA, transcript variant 1 (LOC657072), mRNA Length = 936 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Plus Query: 160 cccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtg 219 |||||||| || |||||||||||| |||| || ||||| || |||||||| || |||||| Sbjct: 151 cccatggaagtcatgggcctgatgttgggtgaattcgttgatgactacaccgtgagggtg 210 Query: 220 gtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccac 279 | || || ||||| ||||| |||| |||||| |||||||| || |||||||| |||| | Sbjct: 211 atcgacgtgttcgcgatgccccagaccgggactggggtcagtgtggaggccgtggacccc 270 Query: 280 gtcttccagaccaacatgctcgacatg 306 ||||||||| |||| ||||| |||||| Sbjct: 271 gtcttccaggccaaaatgctggacatg 297
>emb|AJ249916.1|GCY249916 Geodia cydonium mRNA for putative multidrug resistance protein (pohl gene) Length = 1011 Score = 101 bits (51), Expect = 2e-18 Identities = 246/311 (79%) Strand = Plus / Plus Query: 103 gtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgccc 162 |||||||| || ||||||||||| ||||||||| | ||||| || | || ||||| ||| Sbjct: 110 gtctacatatcttccctcgcccttctcaagatgttgaagcatggccgtgcgggcgtcccc 169 Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtg 222 ||||| |||||||| || ||| |||| ||||| || || ||||| || || | ||| | Sbjct: 170 atggaagtgatggggctcatgttgggggagtttgtggatgactataccgtgactgtgatt 229 Query: 223 gatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtc 282 |||||||| |||||||| |||||||| || || || || || ||||| || || | || Sbjct: 230 gatgtctttgccatgccacagagcggaactggtgtgagtgtggaggcagttgatccggta 289 Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggc 342 || ||| |||| ||| | |||||| | |||||||| || | || || ||||| || || Sbjct: 290 tttcaggccaaaatgttggacatgttgaagcagacggggcgtcccgagatggtagttggg 349 Query: 343 tggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaatactcag 402 ||||||||||| || ||||||||||| |||||||| || ||||||||||| || ||||| Sbjct: 350 tggtaccactcccaccctggatttggatgctggctgtccggagttgacataaacactcaa 409 Query: 403 cagagttttga 413 ||||| ||||| Sbjct: 410 cagagctttga 420
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 130 aagatgctcaagcacgggagggccggcgtgcccatggaggtgatgggcctgatgctgggc 189 |||||||| || ||| | ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 730339 aagatgctgaaacacagcagggcgggcgtgcccatggaggtgatggggctgatgctgggg 730398 Query: 190 gagttcgtcgacgactacacggtcagggtggtggatgtcttcgccatgccgcag 243 || || || || || |||||||||| |||||||| || || |||||||||||| Sbjct: 730399 gactttgtggatgagtacacggtcaatgtggtggacgtgtttgccatgccgcag 730452 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 331 atggtggtaggctggtaccactcgcatcctggatttggttgctggct 377 ||||| || ||||||||||||||||| || || ||||| |||||||| Sbjct: 730540 atggtagttggctggtaccactcgcacccgggttttgggtgctggct 730586
>ref|NM_211733.1| Eremothecium gossypii AGR006Wp (AGR006W), mRNA Length = 936 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 130 aagatgctcaagcacgggagggccggcgtgcccatggaggtgatgggcctgatgctgggc 189 |||||||| || ||| | ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 121 aagatgctgaaacacagcagggcgggcgtgcccatggaggtgatggggctgatgctgggg 180 Query: 190 gagttcgtcgacgactacacggtcagggtggtggatgtcttcgccatgccgcag 243 || || || || || |||||||||| |||||||| || || |||||||||||| Sbjct: 181 gactttgtggatgagtacacggtcaatgtggtggacgtgtttgccatgccgcag 234 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 331 atggtggtaggctggtaccactcgcatcctggatttggttgctggct 377 ||||| || ||||||||||||||||| || || ||||| |||||||| Sbjct: 322 atggtagttggctggtaccactcgcacccgggttttgggtgctggct 368
>ref|XM_744382.1| Aspergillus fumigatus Af293 proteasome regulatory particle subunit RpnK (Afu2g03400) partial mRNA Length = 1008 Score = 87.7 bits (44), Expect = 4e-14 Identities = 179/224 (79%) Strand = Plus / Plus Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 ||||| ||||| || ||||||||||||||||| || |||||||| || ||||| || | Sbjct: 157 gtgcctatggaagtcatgggcctgatgctgggagaattcgtcgatgaatacacagttcgt 216 Query: 217 gtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgac 276 ||||| ||||| || |||||||| |||||||| || || ||||| || |||||||| ||| Sbjct: 217 gtggttgatgtttttgccatgccccagagcggtactggtgtcagtgttgaggccgtggac 276 Query: 277 cacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtg 336 | ||| || |||||||| ||| | || ||||| ||| || ||| | || |||| || Sbjct: 277 cccgtttttcagaccaagatgatggagatgcttcggcaaactggacggccggaaacagtc 336 Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttc 380 || || ||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 337 gttggatggtatcactcccatcctggttttggctgctggctttc 380 Score = 40.1 bits (20), Expect = 7.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 523 ggccaggagccacggcagacaacatcgaatgttgggcacctaaacaaaccat 574 ||||||||||| |||||||| ||||| ||| | || ||||| ||||| |||| Sbjct: 523 ggccaggagccccggcagacgacatctaatttgggtcacctgaacaagccat 574
>gb|AF195189.1|AF195189 Drosophila melanogaster yippee interacting protein 5 (yip5) mRNA, partial cds Length = 824 Score = 87.7 bits (44), Expect = 4e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 265 gaggccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccggaaga 324 |||||||| || | |||||||||| |||| ||| | |||||||| |||||||| || || Sbjct: 11 gaggccgtggatcccgtcttccaggccaagatgttggacatgctgaagcagacgggtcga 70 Query: 325 cctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcagga 384 || |||||||| || |||||||| ||||||||||| || || || |||||||| || || Sbjct: 71 cccgaaatggtcgtcggctggtatcactcgcatcccggtttcggctgctggctgtccggc 130 Query: 385 gttgacatcaatactcagca 404 || ||||||||||| ||||| Sbjct: 131 gtggacatcaatacgcagca 150 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 462 tgtcaaggggaaagtggtcattgatgcattccg 494 ||||||||| ||||||||||| ||||| ||||| Sbjct: 208 tgtcaagggcaaagtggtcatcgatgccttccg 240
>dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT48M22, TM0118c, complete sequence Length = 91116 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 322 agacctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttca 381 |||||||| |||||||| ||||||||||| || |||||||||||||| || ||||| || Sbjct: 70551 agacctgagatggtggttggctggtaccattcacatcctggatttggatgttggctgtct 70492 Query: 382 ggagttgacatcaatactcagcag 405 || |||||||||||||| |||||| Sbjct: 70491 ggtgttgacatcaatacacagcag 70468 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 85 ctcgactcctccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcac 144 ||||| ||||||||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 71037 ctcgattcctccgagcaggtctacatctcttcgctcgcacttctcaagatgctcaagcac 70978 Query: 145 gg 146 || Sbjct: 70977 gg 70976 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 446 tagatcccatccagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaacc 505 ||||||| || |||||||| || || |||||||| |||||||| || || | || || | Sbjct: 68054 tagatccaatacagagtgttaaaggaaaagtggtgattgatgcttttcgattgatcaatc 67995 Query: 506 ctcagaccatgatgcttggccaggagccacggcagacaacatcgaatgttgggcacctaa 565 | ||||| ||||||||||| || || ||| ||||||||||||| ||| | ||||| || | Sbjct: 67994 cccagacaatgatgcttggtcaagaaccaaggcagacaacatccaatttggggcatctta 67935 Query: 566 acaaaccat 574 ||||||||| Sbjct: 67934 acaaaccat 67926 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtg 222 |||||||||||||| |||||| |||| |||||||| || || ||||| || | || || Sbjct: 70857 atggaggtgatgggtctgatgttgggggagttcgtggatgagtacactgttcgtgttgtt 70798 Query: 223 gatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtc 282 |||||||| || ||||||||||| || || || || || || || || || || || || Sbjct: 70797 gatgtctttgcaatgccgcagagtggaactggtgttagtgttgaagctgttgatcatgtt 70738 Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaag 323 |||||||| || ||||| |||||||| ||||| || ||||| Sbjct: 70737 ttccagactaatatgcttgacatgcttaagcaaactggaag 70697
>gb|AF077534.2| Caenorhabditis elegans cosmid K07D4, complete sequence Length = 44334 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 295 atgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcg 354 ||||||||||||||||| |||||||||||||| || ||||| || || |||||||| || Sbjct: 38980 atgctcgacatgctcaaacagaccggaagacccgagatggtcgtcggatggtaccattcc 38921 Query: 355 catcctggatttggttgctggctttcaggagttgacatcaatactcagcag 405 ||||| ||||| || || ||||| || || || |||||||| ||||||||| Sbjct: 38920 catccaggattcggatgttggctctccggcgtcgacatcaacactcagcag 38870 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 130 aagatgctcaagcacgggagggccggcgtgcccatggaggtgatgggcctgatgctgggc 189 ||||||||||| ||||| || ||||| || |||||||| |||||||| |||||||| || Sbjct: 39203 aagatgctcaaacacggaagagccggagttcccatggaagtgatggggctgatgcttgga 39144 Query: 190 gagttcgtcgacgactacacggtca 214 || ||||||||||||||||| |||| Sbjct: 39143 gaattcgtcgacgactacaccgtca 39119
>emb|CT032525.1| Platynereis dumerilii EST IB0AAA36DF08EM1 Length = 889 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 ||||||||||| ||||| ||||| || || |||||||| ||||||||||| || |||||| Sbjct: 360 gacatgctcaaacagactggaaggccggagatggtggtgggctggtaccattcccatcct 419 Query: 361 ggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 || || || |||||| | ||||| || || ||||| || || |||||||||||||| Sbjct: 420 gggttcggctgctggttgtcaggcgtagatatcaacacccaacagagttttgaagc 475 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 451 cccatccagagtgtcaaggggaaagtggtcattgatgcattccg 494 ||||||||||||||||| || || || || |||||||||||||| Sbjct: 510 cccatccagagtgtcaaaggaaaggttgtgattgatgcattccg 553
>emb|CT032524.1| Platynereis dumerilii EST IB0AAA36DF08FM1 Length = 883 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 ||||||||||| ||||| ||||| || || |||||||| ||||||||||| || |||||| Sbjct: 776 gacatgctcaaacagactggaaggccggagatggtggtgggctggtaccattcccatcct 717 Query: 361 ggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 || || || |||||| | ||||| || || ||||| || || |||||||||||||| Sbjct: 716 gggttcggctgctggttgtcaggcgtagatatcaacacccaacagagttttgaagc 661 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 451 cccatccagagtgtcaaggggaaagtggtcattgatgcattccg 494 ||||||||||||||||| || || || || |||||||||||||| Sbjct: 626 cccatccagagtgtcaaaggaaaggttgtgattgatgcattccg 583
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170, complete sequence Length = 101172 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 85 ctcgactcctccgagcaggtctacatctcctccctcgccctcctcaagatgctcaa 140 ||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 37554 ctcgattcctccgagcaggtttacatctcctccctcgcccttctcaaaatgctcaa 37499
>ref|XM_369606.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG05858.4) partial mRNA Length = 1008 Score = 77.8 bits (39), Expect = 4e-11 Identities = 132/163 (80%) Strand = Plus / Plus Query: 115 tccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggaggtgatg 174 ||||| |||||||| |||||||| |||||| | ||||| ||||||||||| || ||| Sbjct: 97 tcccttgccctcctaaagatgctgcggcacggccgcgccggtgtgcccatggaagtcatg 156 Query: 175 ggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtggatgtcttcgcc 234 || || |||||||||||||| ||||| |||| ||| || | || || ||||| || ||| Sbjct: 157 ggacttatgctgggcgagtttgtcgatgacttcacagtacgcgtcgttgatgtttttgcc 216 Query: 235 atgccgcagagcgggaccggggtcagcgtcgaggccgtcgacc 277 ||||| || ||||| || || ||||| |||||||| ||||||| Sbjct: 217 atgccacaaagcggtactggagtcagtgtcgaggcagtcgacc 259
>gb|DQ440392.1| Aedes aegypti clone AET-5254 26S proteasome regulatory complex subunit RPN11 mRNA, complete cds Length = 936 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 328 gaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagtt 387 ||||||||||| || ||||| ||||||||||| || |||||||||||||| ||||| || Sbjct: 319 gaaatggtggtcggatggtatcactcgcatccgggctttggttgctggctctcaggtgtg 378 Query: 388 gacatcaatactcagcag 405 || ||||| ||||||||| Sbjct: 379 gatatcaacactcagcag 396 Score = 60.0 bits (30), Expect = 8e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 95 ccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccg 154 |||||||||||||||| ||||| || || || || |||||||| || ||||| | || | Sbjct: 86 ccgagcaggtctacatttcctcgctggcactgctgaagatgcttaaacacggtcgcgctg 145 Query: 155 gcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggt 212 | || ||||||||||| ||||| |||||| |||| || || || || ||||||||||| Sbjct: 146 gagttcccatggaggttatgggactgatgttgggggaatttgtggatgactacacggt 203
>gb|BC045094.1| Xenopus laevis 26S proteasome-associated pad1 homolog, mRNA (cDNA clone MGC:53911 IMAGE:5569802), complete cds Length = 1227 Score = 75.8 bits (38), Expect = 1e-10 Identities = 251/322 (77%) Strand = Plus / Plus Query: 95 ccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccg 154 |||| ||||| || ||||||||||| || | || |||||||| || |||||| | || | Sbjct: 126 ccgaacaggtttatatctcctccctggctttgcttaagatgctaaaacacgggcgagctg 185 Query: 155 gcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtca 214 | || || ||||| || ||||| ||||||||||| ||||| || || || ||||| |||| Sbjct: 186 gtgtcccaatggaagtcatgggactgatgctgggagagtttgtggatgattacacagtca 245 Query: 215 gggtggtggatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcg 274 |||| | ||||| || || ||||||||| || || || || || || ||||| || | Sbjct: 246 gggtcattgatgtttttgctatgccgcagtctggaactggtgttagtgtggaggctgtgg 305 Query: 275 accacgtcttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatgg 334 | | ||| |||||| | || ||| | || ||| | || ||||| ||||| |||||||||| Sbjct: 306 atcccgttttccaggctaaaatgttggatatgttaaaacagactggaaggcctgaaatgg 365 Query: 335 tggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatca 394 | || || ||||| ||| || ||||| ||||| ||||||||||| || |||||||| | Sbjct: 366 tagtcggttggtatcacagccaccctggctttggctgctggctttctggcgttgacatta 425 Query: 395 atactcagcagagttttgaagc 416 |||| |||||||| |||||||| Sbjct: 426 atacccagcagagctttgaagc 447
>gb|AY022700.1| Oryza sativa microsatellite MRG5025 containing (CCG)X8, genomic sequence Length = 224 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 50 ccgggatggggcagccggggaccgactcgccgctgctcgactcctccgagcaggtct 106 |||| |||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 57 ccggcatggggcagccgccgtcggactcgccgctgctcgactcctccgagcaggtct 1
>emb|BX031535.1|CNS08WHV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA47AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1005 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 106 tacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatg 165 ||||||||||| ||||| ||| | |||||||| || ||||| | ||||| ||||| ||| Sbjct: 987 tacatctcctcgctcgctctcttgaagatgctgaaacacggccgtgccggagtgccgatg 928 Query: 166 gaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 || ||||||||||||||| |||| || ||||| |||||||| Sbjct: 927 gaagtgatgggcctgatgttgggtgaattcgtggacgacta 887 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 |||||||||||||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct: 792 gacatgctcaagcaaaccggtcggccggagatggtggtcggatggtaccactcccatccg 733 Query: 361 ggatttggttgctggct 377 || ||||| |||||||| Sbjct: 732 ggctttggatgctggct 716
>emb|BX031534.1|CNS08WHU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1061 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 106 tacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatg 165 ||||||||||| ||||| ||| | |||||||| || ||||| | ||||| ||||| ||| Sbjct: 315 tacatctcctcgctcgctctcttgaagatgctgaaacacggccgtgccggagtgccgatg 374 Query: 166 gaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 || ||||||||||||||| |||| || ||||| |||||||| Sbjct: 375 gaagtgatgggcctgatgttgggtgaattcgtggacgacta 415 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 |||||||||||||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct: 510 gacatgctcaagcaaaccggtcggccggagatggtggtcggatggtaccactcccatccg 569 Query: 361 ggatttggttgctggct 377 || ||||| |||||||| Sbjct: 570 ggctttggatgctggct 586
>emb|BX008172.1|CNS08EGW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 965 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 106 tacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatg 165 ||||||||||| ||||| ||| | |||||||| || ||||| | ||||| ||||| ||| Sbjct: 294 tacatctcctcgctcgctctcttgaagatgctgaaacacggccgtgccggagtgccgatg 353 Query: 166 gaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 || ||||||||||||||| |||| || ||||| |||||||| Sbjct: 354 gaagtgatgggcctgatgttgggtgaattcgtggacgacta 394 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 |||||||||||||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct: 489 gacatgctcaagcaaaccggtcggccggagatggtggtcggatggtaccactcccatccg 548 Query: 361 ggatttggttgctggct 377 || ||||| |||||||| Sbjct: 549 ggctttggatgctggct 565
>ref|XM_314713.2| Anopheles gambiae str. PEST ENSANGP00000013055 (ENSANGG00000010566), mRNA Length = 1404 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 106 tacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatg 165 ||||||||||| ||||| ||| | |||||||| || ||||| | ||||| ||||| ||| Sbjct: 311 tacatctcctcgctcgctctcttgaagatgctgaaacacggccgtgccggagtgccgatg 370 Query: 166 gaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 || ||||||||||||||| |||| || ||||| |||||||| Sbjct: 371 gaagtgatgggcctgatgttgggtgaattcgtggacgacta 411 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 |||||||||||||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct: 506 gacatgctcaagcaaaccggtcggccggagatggtggtcggatggtaccactcccatccg 565 Query: 361 ggatttggttgctggct 377 || ||||| |||||||| Sbjct: 566 ggctttggatgctggct 582
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 322 agacctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttca 381 |||||||| |||||||| || ||||| || || ||||||||||| || ||||||||||| Sbjct: 17410 agacctgagatggtggttggttggtatcattcacatcctggattcggctgctggctttct 17469 Query: 382 ggagttgacatcaatactca 401 || |||||||| |||||||| Sbjct: 17470 ggggttgacattaatactca 17489 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 446 tagatcccatccagagtgtcaaggggaaagtggtcattgatgcattccgtctcattaacc 505 ||||||| || |||||||| || || || ||||| |||||||| ||||| ||| || | Sbjct: 17715 tagatccgattcagagtgtgaaaggaaaggtggtgattgatgcgttccgctccataaatc 17774 Query: 506 ctcagaccatgatgcttggccaggagccacggcagacaacatcgaatgttgggcacctaa 565 | |||||||| |||||||| ||||| || || || ||||||||||| |||||||| | | Sbjct: 17775 cacagaccattatgcttgggcaggaaccccgtcaaacaacatcgaaccttgggcacttga 17834 Query: 566 acaaaccat 574 ||||||||| Sbjct: 17835 acaaaccat 17843 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 97 gagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgg 146 |||||||| |||||||| || ||||| |||||||||||||| |||||||| Sbjct: 16904 gagcaggtttacatctcttctctcgctctcctcaagatgcttaagcacgg 16953 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaag 323 |||||||| || |||||||||||||| || ||||||||||| Sbjct: 17280 ttccagactaatatgctcgacatgcttaaacagaccggaag 17320
>emb|CT025430.2| Xenopus tropicalis finished cDNA, clone TGas117j07 Length = 1734 Score = 67.9 bits (34), Expect = 3e-08 Identities = 199/254 (78%) Strand = Plus / Plus Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtg 222 ||||| || ||||| ||||||||||| ||||| || || || ||||| |||||||| | Sbjct: 216 atggaagtcatgggactgatgctgggagagtttgtggatgattacacagtcagggttatt 275 Query: 223 gatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtc 282 |||||||| || ||||| ||| ||| || || || || || ||||| || || | ||| Sbjct: 276 gatgtctttgctatgccacagtccggaactggtgttagtgtggaggctgtggatcccgtt 335 Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggc 342 |||||| | || ||| | || ||| | || ||||| ||||| |||||||||||||| || Sbjct: 336 ttccaggctaaaatgttggatatgttaaaacagactggaaggcctgaaatggtggtcggt 395 Query: 343 tggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaatactcag 402 ||||| ||| || ||||| ||||| |||||||| || || |||||||| ||||| ||| Sbjct: 396 tggtatcacagccaccctggctttggctgctggctctccggcgttgacattaatacccag 455 Query: 403 cagagttttgaagc 416 ||||| || ||||| Sbjct: 456 cagagcttcgaagc 469
>ref|XM_566594.1| Cryptococcus neoformans var. neoformans JEC21 multidrug resistance protein (CNA02100) partial mRNA Length = 933 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 262 gtcgaggccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgga 321 |||||| |||| ||||| |||||||| ||||| ||||| |||||||| || |||||||| Sbjct: 256 gtcgagtccgtggaccatgtcttccaaaccaaaatgctggacatgctgaaacagaccggg 315 Query: 322 agacctgaaatggtggtaggctggta 347 | ||||||||||| || |||||||| Sbjct: 316 cggcctgaaatggttgtcggctggta 341 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 130 aagatgctcaagcacgggagggccggcgtgcccatggaggtgatgggcctgatgctgggc 189 ||||||||||| || || |||| ||||| || |||||||| ||||| |||||||| ||| Sbjct: 124 aagatgctcaaacatggtcgggcgggcgttccaatggaggttatgggtctgatgctaggc 183 Query: 190 ga 191 || Sbjct: 184 ga 185
>gb|BC091596.1| Xenopus tropicalis MGC97603 protein, mRNA (cDNA clone MGC:97603 IMAGE:6978091), complete cds Length = 1717 Score = 67.9 bits (34), Expect = 3e-08 Identities = 199/254 (78%) Strand = Plus / Plus Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtg 222 ||||| || ||||| ||||||||||| ||||| || || || ||||| |||||||| | Sbjct: 184 atggaagtcatgggactgatgctgggagagtttgtggatgattacacagtcagggttatt 243 Query: 223 gatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtc 282 |||||||| || ||||| ||| ||| || || || || || ||||| || || | ||| Sbjct: 244 gatgtctttgctatgccacagtccggaactggtgttagtgtggaggctgtggatcccgtt 303 Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggc 342 |||||| | || ||| | || ||| | || ||||| ||||| |||||||||||||| || Sbjct: 304 ttccaggctaaaatgttggatatgttaaaacagactggaaggcctgaaatggtggtcggt 363 Query: 343 tggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaatactcag 402 ||||| ||| || ||||| ||||| |||||||| || || |||||||| ||||| ||| Sbjct: 364 tggtatcacagccaccctggctttggctgctggctctccggcgttgacattaatacccag 423 Query: 403 cagagttttgaagc 416 ||||| || ||||| Sbjct: 424 cagagcttcgaagc 437
>ref|NM_001030465.1| Xenopus tropicalis MGC97603 protein (MGC97603), mRNA Length = 1717 Score = 67.9 bits (34), Expect = 3e-08 Identities = 199/254 (78%) Strand = Plus / Plus Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggtggtg 222 ||||| || ||||| ||||||||||| ||||| || || || ||||| |||||||| | Sbjct: 184 atggaagtcatgggactgatgctgggagagtttgtggatgattacacagtcagggttatt 243 Query: 223 gatgtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtc 282 |||||||| || ||||| ||| ||| || || || || || ||||| || || | ||| Sbjct: 244 gatgtctttgctatgccacagtccggaactggtgttagtgtggaggctgtggatcccgtt 303 Query: 283 ttccagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggc 342 |||||| | || ||| | || ||| | || ||||| ||||| |||||||||||||| || Sbjct: 304 ttccaggctaaaatgttggatatgttaaaacagactggaaggcctgaaatggtggtcggt 363 Query: 343 tggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaatactcag 402 ||||| ||| || ||||| ||||| |||||||| || || |||||||| ||||| ||| Sbjct: 364 tggtatcacagccaccctggctttggctgctggctctccggcgttgacattaatacccag 423 Query: 403 cagagttttgaagc 416 ||||| || ||||| Sbjct: 424 cagagcttcgaagc 437
>gb|BC073436.1| Xenopus laevis MGC80929 protein, mRNA (cDNA clone MGC:80929 IMAGE:5516050), complete cds Length = 1219 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 313 cagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctggatttggttgc 372 ||||||||||| || ||||||||||| || ||||| ||| || ||||| ||||| ||| Sbjct: 345 cagaccggaaggcccgaaatggtggtcggttggtatcacagccaccctggctttggctgc 404 Query: 373 tggctttcaggagttgacatcaatactcagcagagttttgaagc 416 |||||||| || ||||| || ||||| |||||||| || ||||| Sbjct: 405 tggctttccggcgttgatattaatacccagcagagcttcgaagc 448 Score = 44.1 bits (22), Expect = 0.50 Identities = 88/110 (80%) Strand = Plus / Plus Query: 109 atctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatggag 168 ||||||||||| || | || |||||||| || |||||| | || || || || ||||| Sbjct: 141 atctcctccctggctttgcttaagatgctaaaacacgggcgagctggtgtcccaatggaa 200 Query: 169 gtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagggt 218 || ||||| ||||||||||| ||||| || || || ||||| |||||||| Sbjct: 201 gtcatggggctgatgctgggagagtttgtggatgattacacagtcagggt 250
>ref|XM_615793.2| PREDICTED: Bos taurus similar to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11) (MAD1) (LOC535683), mRNA Length = 1272 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 310 aagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctggatttggt 369 |||||||| ||||| ||||| ||||| || || ||||| ||| || ||||| |||||| Sbjct: 328 aagcagacaggaaggcctgagatggttgttggttggtatcacagtcaccctggctttggt 387 Query: 370 tgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 388 tgttggctttctggtgtggatatcaacactcagcagagctttgaagc 434
>ref|XM_852348.1| PREDICTED: Canis familiaris similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, transcript variant 4 (LOC478765), mRNA Length = 1331 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 310 aagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctggatttggt 369 |||||||| ||||| ||||| ||||| || || ||||| ||| || ||||| |||||| Sbjct: 366 aagcagacaggaaggcctgagatggttgttggttggtatcacagtcaccctggttttggt 425 Query: 370 tgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 426 tgttggctttctggtgtggatatcaacactcagcagagctttgaagc 472
>ref|XM_535931.2| PREDICTED: Canis familiaris similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, transcript variant 2 (LOC478765), mRNA Length = 1356 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 310 aagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctggatttggt 369 |||||||| ||||| ||||| ||||| || || ||||| ||| || ||||| |||||| Sbjct: 391 aagcagacaggaaggcctgagatggttgttggttggtatcacagtcaccctggttttggt 450 Query: 370 tgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 451 tgttggctttctggtgtggatatcaacactcagcagagctttgaagc 497
>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2 Length = 180915 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 340 ggctggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaatact 399 ||||||||||| || ||||| || |||||||||||||| || ||||| || || |||||| Sbjct: 117349 ggctggtaccattctcatccaggttttggttgctggctgtctggagtagatattaatact 117290 Query: 400 cagcagagttttgaa 414 ||||| | ||||||| Sbjct: 117289 cagcaaaattttgaa 117275
>gb|AY610219.1| Sus scrofa clone Clu_9918.scr.msk.p1.Contig2, mRNA sequence Length = 1442 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 310 aagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctggatttggt 369 |||||||| ||||| ||||| ||||| || || ||||| ||| || ||||| |||||| Sbjct: 472 aagcagacaggaaggcctgagatggttgttggttggtatcacagtcaccctggctttggt 531 Query: 370 tgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 532 tgttggctttctggtgtggatatcaacactcagcagagctttgaagc 578
>gb|AY812783.1| Schistosoma japonicum SJCHGC06520 protein mRNA, complete cds Length = 1005 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 304 atgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctgga 363 |||||||| || || ||| | ||||| ||||| || || ||||| ||||| ||||||||| Sbjct: 336 atgctcaaacaaacgggacgtcctgagatggttgtcggatggtatcactcacatcctgga 395 Query: 364 tttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 |||||||||||| | || || || || || ||||| || || ||||||||||| Sbjct: 396 tttggttgctggttatcgggtgtagatatgaatacacaacaaagttttgaagc 448 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 430 gcagttgctgttgtgatagatcccatccagagtgtcaaggggaaagtggtcattgatgca 489 ||||| |||||||| | ||||| || |||||||| || || ||||| |||||||||||| Sbjct: 462 gcagtagctgttgttgttgatcctatacagagtgtgaaaggcaaagttgtcattgatgca 521 Query: 490 tt 491 || Sbjct: 522 tt 523
>emb|CR675316.2|CNS0FK1M Tetraodon nigroviridis full-length cDNA Length = 1106 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 ||||||||||||||||| || ||||| || |||||||| || ||||||||| || || Sbjct: 386 gacatgctcaagcagactggcagaccagagatggtggtgggatggtaccacagtcacccc 445 Query: 361 ggatttggttgctggctttcaggagttgacatcaatactcagcagagttttga 413 || || || |||||| | || || || |||||||| || |||||||||||||| Sbjct: 446 gggttcggctgctggttgtctggcgtggacatcaacacgcagcagagttttga 498 Score = 46.1 bits (23), Expect = 0.13 Identities = 86/107 (80%) Strand = Plus / Plus Query: 106 tacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatg 165 ||||||||||| || ||||| || |||||||| ||||| ||| | || || || || ||| Sbjct: 191 tacatctcctctctggccctacttaagatgctgaagcatgggcgtgctggtgtaccaatg 250 Query: 166 gaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggt 212 || || ||||| |||||||||| || || || || ||||||||||| Sbjct: 251 gaagttatgggtttgatgctgggagaatttgttgatgactacacggt 297
>gb|AC140547.18| Medicago truncatula clone mth2-17p16, complete sequence Length = 123189 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 322 agacctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttca 381 |||||||| ||||| || || |||||||| || |||||||||||||| || ||| | || Sbjct: 47248 agacctgagatggttgttggttggtaccattcacatcctggatttggctgttggttgtct 47307 Query: 382 ggagttgacatcaatac 398 || |||||||||||||| Sbjct: 47308 ggtgttgacatcaatac 47324 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 94 tccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgg 146 ||||| || |||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 46261 tccgaacaagtctacatctcctccctcgctcttctcaagatgcttaaacacgg 46313
>emb|BX056616.1|CNS09FUK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC36AB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 817 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 |||||||||||||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct: 485 gacatgctcaagcacaccggtcggccggagatggtggtcggatggtaccactcccatccg 544 Query: 361 ggatttggttgctggct 377 || ||||| |||||||| Sbjct: 545 ggctttggatgctggct 561 Score = 58.0 bits (29), Expect = 3e-05 Identities = 84/101 (83%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 106 tacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatg 165 ||||||||||| ||||| ||| | |||||||| || ||||| | || || ||||| ||| Sbjct: 291 tacatctcctcgctcgctctcttgaagatgctgaaacacggccgtgc-ggagtgccgatg 349 Query: 166 gaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 || ||||||||||||||| |||| || ||||| |||||||| Sbjct: 350 gaagtgatgggcctgatgttgggtgaattcgtggacgacta 390
>emb|BX057197.1|CNS09GAP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC37AB09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 620 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 |||||||||||||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct: 473 gacatgctcaagcaaaccggtcggccggagatggtggtcggatggtaccactcccatccg 532 Query: 361 ggatttggttgctggct 377 || ||||| |||||||| Sbjct: 533 ggctttggatgctggct 549 Score = 58.0 bits (29), Expect = 3e-05 Identities = 84/101 (83%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 106 tacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatg 165 ||||||||||| ||||| ||| | |||||||| || ||||| | || || ||||| ||| Sbjct: 279 tacatctcctcgctcgctctcttgaagatgctgaaacacggccgtgc-ggagtgccgatg 337 Query: 166 gaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 || ||||||||||||||| |||| || ||||| |||||||| Sbjct: 338 gaagtgatgggcctgatgttgggtgaattcgtggacgacta 378
>emb|BX008173.1|CNS08EGX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 965 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 |||||||||||||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct: 772 gacatgctcaagcaaaccggtcggccggagatggtggtcggatggtaccactcccatccg 713 Query: 361 ggatttggttgctggct 377 || ||||| |||||||| Sbjct: 712 ggctttggatgctggct 696 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 151 gccggcgtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 ||||| ||||| ||||| ||||||||||||||| |||| || ||||| |||||||| Sbjct: 922 gccggagtgccgatggaagtgatgggcctgatgttgggtgaattcgtggacgacta 867
>ref|NM_001031256.1| Gallus gallus proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 (PSMD14), mRNA Length = 5247 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 304 atgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctgga 363 ||||| || ||||| ||||||||||| ||||| || || ||||| ||| |||||||| Sbjct: 469 atgctgaaacagacaggaagacctgagatggttgttggttggtatcacagtcatcctggc 528 Query: 364 tttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| || ||| | || || || || ||||||||||||||||| |||||||| Sbjct: 529 tttggctgttggttgtctggtgtagatatcaatactcagcagagctttgaagc 581
>emb|AJ720599.1| Gallus gallus mRNA for hypothetical protein, clone 20p24 Length = 5247 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 304 atgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctgga 363 ||||| || ||||| ||||||||||| ||||| || || ||||| ||| |||||||| Sbjct: 469 atgctgaaacagacaggaagacctgagatggttgttggttggtatcacagtcatcctggc 528 Query: 364 tttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| || ||| | || || || || ||||||||||||||||| |||||||| Sbjct: 529 tttggctgttggttgtctggtgtagatatcaatactcagcagagctttgaagc 581
>gb|AC145022.28| Medicago truncatula clone mth2-8m24, complete sequence Length = 108548 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 94 tccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgg 146 ||||| || |||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 5041 tccgaacaagtctacatctcctccctcgctcttctcaagatgcttaaacacgg 5093
>emb|CR387677.1| Gallus gallus finished cDNA, clone ChEST73p15 Length = 1446 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 304 atgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctgga 363 ||||| || ||||| ||||||||||| ||||| || || ||||| ||| |||||||| Sbjct: 474 atgctgaaacagacaggaagacctgagatggttgttggttggtatcacagtcatcctggc 533 Query: 364 tttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| || ||| | || || || || ||||||||||||||||| |||||||| Sbjct: 534 tttggctgttggttgtctggtgtagatatcaatactcagcagagctttgaagc 586
>ref|XM_515855.1| PREDICTED: Pan troglodytes similar to 26S proteasome-associated pad1 homolog (LOC459686), mRNA Length = 906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 319 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 377
>ref|NM_005805.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 (PSMD14), mRNA Length = 1278 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 659 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 717
>emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in linkage group 11, complete sequence Length = 263287 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 157 gtgcccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggtcagg 216 ||||||||||| || ||||| ||||||||||| ||||| || ||||| ||||| || | Sbjct: 252585 gtgcccatggaagtcatgggtctgatgctgggagagtttgtggacgattacacagtacgc 252526 Query: 217 gtggtggatgtcttcgccatgccgcag 243 ||| | ||||| || |||||||||||| Sbjct: 252525 gtgattgatgtgtttgccatgccgcag 252499 Score = 44.1 bits (22), Expect = 0.50 Identities = 70/86 (81%) Strand = Plus / Minus Query: 325 cctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcagga 384 ||||| |||||||| |||||||||||| || ||||| || || |||||| | ||||| Sbjct: 251077 cctgagatggtggtgggctggtaccacagtcaccctggtttcggctgctggttgtcaggt 251018 Query: 385 gttgacatcaatactcagcagagttt 410 || ||||| || || ||||||||||| Sbjct: 251017 gtggacattaacacacagcagagttt 250992 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 433 gttgctgttgtgatagatcccatccagagtgtcaaggg 470 ||||| |||||| | |||||||||||||| |||||||| Sbjct: 250969 gttgccgttgtggtcgatcccatccagagcgtcaaggg 250932 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 100 caggtctacatctcctccctcgccctcctcaag 132 ||||| ||||||||||||||||| || |||||| Sbjct: 254063 caggtgtacatctcctccctcgctctgctcaag 254031
>emb|CR712625.2|CNS0GCT9 Tetraodon nigroviridis full-length cDNA Length = 1106 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccac 351 ||||||||||||||||| || ||||| || |||||||| || ||||||||| Sbjct: 386 gacatgctcaagcagactggcagaccagagatggtggtgggatggtaccac 436 Score = 46.1 bits (23), Expect = 0.13 Identities = 86/107 (80%) Strand = Plus / Plus Query: 106 tacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgcccatg 165 ||||||||||| || ||||| || |||||||| ||||| ||| | || || || || ||| Sbjct: 191 tacatctcctctctggccctacttaagatgctgaagcatgggcgtgctggtgtaccaatg 250 Query: 166 gaggtgatgggcctgatgctgggcgagttcgtcgacgactacacggt 212 || || ||||| |||||||||| || || || || ||||||||||| Sbjct: 251 gaagttatgggtttgatgctgggagaatttgttgatgactacacggt 297
>ref|XM_759673.1| Theileria parva strain Muguga proteasome regulatory subunit (TP02_0201) partial mRNA Length = 1115 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 343 tggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaatactcag 402 ||||| ||||| ||||| || ||||| |||||| |||||||| ||| | ||||||||| Sbjct: 516 tggtatcactcacatccgggctttggatgctggttttcaggaactgatgtgaatactcag 575 Query: 403 cagagttttga 413 ||||||||||| Sbjct: 576 cagagttttga 586
>ref|XM_947427.1| Theileria annulata strain Ankara proteasome regulatory subunit (TA11850) partial mRNA Length = 939 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 343 tggtaccactcgcatcctggatttggttgctggctttcaggagttgacatcaatactcag 402 ||||||||||| ||||| || ||||| || ||| |||||||| ||| | ||||||||| Sbjct: 340 tggtaccactcacatccaggctttggatgttggttttcaggaactgatgtgaatactcag 399 Query: 403 cagagttttga 413 ||||||||||| Sbjct: 400 cagagttttga 410
>gb|BC097427.1| Rattus norvegicus similar to T-Brain-1, mRNA (cDNA clone IMAGE:7455230), complete cds Length = 1535 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || |||||||| ||||||||||| |||||||| Sbjct: 627 cctggctttggctgttggctttctggtgtggacatcaacactcagcagagctttgaagc 685
>gb|BC066336.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, mRNA (cDNA clone MGC:87397 IMAGE:5296432), complete cds Length = 1278 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 659 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 717
>emb|CR615752.1| full-length cDNA clone CS0DI002YC21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1492 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 617 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 675
>emb|CR617325.1| full-length cDNA clone CS0DF011YP17 of Fetal brain of Homo sapiens (human) Length = 1527 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 668 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 726
>emb|CR606475.1| full-length cDNA clone CS0DM002YB05 of Fetal liver of Homo sapiens (human) Length = 1481 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 617 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 675
>emb|CR595585.1| full-length cDNA clone CS0DI058YD16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1522 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 644 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 702
>dbj|AK055128.1| Homo sapiens cDNA FLJ30566 fis, clone BRAWH2005068, highly similar to Human 26S proteasome-associated pad1 homolog (POH1) mRNA Length = 1951 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 1050 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 1108
>gb|AC009299.5| Homo sapiens BAC clone RP11-26B22 from 2, complete sequence Length = 169697 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 167819 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 167877
>gb|U86782.1|HSU86782 Human 26S proteasome-associated pad1 homolog (POH1) mRNA, complete cds Length = 1132 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| |||||||| |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 545 cctggctttggttgttggctttctggtgtggatatcaacactcagcagagctttgaagc 603
>ref|XM_505906.1| Yarrowia lipolytica CLIB122, YALI0F26411g predicted mRNA Length = 939 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 160 cccatggaggtgatgggcctgatgctgggcgagttcgtcgacgactacac 209 |||||||| |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 151 cccatggaagtgatgggacttatgctgggagagtttgtggacgactacac 200
>ref|NM_208154.1| Eremothecium gossypii ABL146Cp (ABL146C), mRNA Length = 1263 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 340 ggctggtaccactcgcatcctggatttggttgctggct 377 |||||||||||||||||||| |||| ||| |||||||| Sbjct: 451 ggctggtaccactcgcatccgggatatggatgctggct 488
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 340 ggctggtaccactcgcatcctggatttggttgctggct 377 |||||||||||||||||||| |||| ||| |||||||| Sbjct: 124127 ggctggtaccactcgcatccgggatatggatgctggct 124090
>gb|DQ214693.1| Taeniopygia guttata clone 0061P0025H01 26S proteasome-associated pad1-like variant 2-like mRNA, complete sequence Length = 1419 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 304 atgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctgga 363 ||||| || ||||| ||||||||||| ||||| || || ||||| || |||||||| Sbjct: 446 atgctgaaacagacgggaagacctgagatggtagttggttggtatcatagtcatcctggc 505 Query: 364 tttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| || ||| | || || || || ||||||||||||||||| |||||||| Sbjct: 506 tttggctgttggttgtctggtgtagatatcaatactcagcagagctttgaagc 558
>gb|DQ214692.1| Taeniopygia guttata clone 0061P0016E01 26S proteasome-associated pad1-like variant 2-like mRNA, complete sequence Length = 1424 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 304 atgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctgga 363 ||||| || ||||| ||||||||||| ||||| || || ||||| || |||||||| Sbjct: 450 atgctgaaacagacgggaagacctgagatggtagttggttggtatcatagtcatcctggc 509 Query: 364 tttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| || ||| | || || || || ||||||||||||||||| |||||||| Sbjct: 510 tttggctgttggttgtctggtgtagatatcaatactcagcagagctttgaagc 562
>gb|DQ214691.1| Taeniopygia guttata clone 0061P0006D06 26S proteasome-associated pad1-like variant 1-like mRNA, complete sequence Length = 1463 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 304 atgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcctgga 363 ||||| || ||||| ||||||||||| ||||| || || ||||| || |||||||| Sbjct: 482 atgctgaaacagacgggaagacctgagatggtagttggttggtatcatagtcatcctggc 541 Query: 364 tttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| || ||| | || || || || ||||||||||||||||| |||||||| Sbjct: 542 tttggctgttggttgtctggtgtagatatcaatactcagcagagctttgaagc 594
>emb|CR719774.2|CNS0GIBO Tetraodon nigroviridis full-length cDNA Length = 1237 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 296 tggaggtgatgggcctgatgctggg 320
>emb|CR702360.2|CNS0G4W4 Tetraodon nigroviridis full-length cDNA Length = 1270 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 338 tggaggtgatgggcctgatgctggg 362
>emb|CR702327.2|CNS0G4V7 Tetraodon nigroviridis full-length cDNA Length = 1303 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 360 tggaggtgatgggcctgatgctggg 384
>emb|CR698457.2|CNS0G1VP Tetraodon nigroviridis full-length cDNA Length = 1114 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 177 tggaggtgatgggcctgatgctggg 201
>emb|CR698218.2|CNS0G1P2 Tetraodon nigroviridis full-length cDNA Length = 1292 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 356 tggaggtgatgggcctgatgctggg 380
>emb|CR696910.2|CNS0G0OQ Tetraodon nigroviridis full-length cDNA Length = 1282 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 347 tggaggtgatgggcctgatgctggg 371
>emb|CR692972.2|CNS0FXNC Tetraodon nigroviridis full-length cDNA Length = 1287 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 360 tggaggtgatgggcctgatgctggg 384
>emb|CR691509.2|CNS0FWIP Tetraodon nigroviridis full-length cDNA Length = 1295 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 353 tggaggtgatgggcctgatgctggg 377
>emb|CR690951.2|CNS0FW37 Tetraodon nigroviridis full-length cDNA Length = 1294 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 354 tggaggtgatgggcctgatgctggg 378
>emb|CR689076.1|CNS0FUN4 Tetraodon nigroviridis full-length cDNA Length = 1293 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 353 tggaggtgatgggcctgatgctggg 377
>emb|CR688795.2|CNS0FUFB Tetraodon nigroviridis full-length cDNA Length = 1098 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 156 tggaggtgatgggcctgatgctggg 180
>emb|CR686556.1|CNS0FSP4 Tetraodon nigroviridis full-length cDNA Length = 1270 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 347 tggaggtgatgggcctgatgctggg 371
>emb|CR685176.2|CNS0FRMS Tetraodon nigroviridis full-length cDNA Length = 1270 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 347 tggaggtgatgggcctgatgctggg 371
>emb|CR684478.2|CNS0FR3E Tetraodon nigroviridis full-length cDNA Length = 1299 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 360 tggaggtgatgggcctgatgctggg 384
>emb|CR682368.2|CNS0FPGS Tetraodon nigroviridis full-length cDNA Length = 1298 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 359 tggaggtgatgggcctgatgctggg 383
>emb|CR679559.2|CNS0FNAR Tetraodon nigroviridis full-length cDNA Length = 1232 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 305 tggaggtgatgggcctgatgctggg 329
>emb|CR678444.2|CNS0FMFV Tetraodon nigroviridis full-length cDNA Length = 1301 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 361 tggaggtgatgggcctgatgctggg 385
>emb|CR676746.1|CNS0FL52 Tetraodon nigroviridis full-length cDNA Length = 1268 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 338 tggaggtgatgggcctgatgctggg 362
>emb|CR676595.2|CNS0FL0V Tetraodon nigroviridis full-length cDNA Length = 1303 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 359 tggaggtgatgggcctgatgctggg 383
>emb|CR675180.1|CNS0FJXU Tetraodon nigroviridis full-length cDNA Length = 1264 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 341 tggaggtgatgggcctgatgctggg 365
>emb|CR674318.2|CNS0FJ9W Tetraodon nigroviridis full-length cDNA Length = 1305 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 361 tggaggtgatgggcctgatgctggg 385
>emb|CR674265.2|CNS0FJ8F Tetraodon nigroviridis full-length cDNA Length = 1281 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 347 tggaggtgatgggcctgatgctggg 371
>emb|CR672566.1|CNS0FHX8 Tetraodon nigroviridis full-length cDNA Length = 1299 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 359 tggaggtgatgggcctgatgctggg 383
>emb|CR669565.1|CNS0FFLV Tetraodon nigroviridis full-length cDNA Length = 1301 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 360 tggaggtgatgggcctgatgctggg 384
>emb|CR669132.2|CNS0FF9U Tetraodon nigroviridis full-length cDNA Length = 1295 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 348 tggaggtgatgggcctgatgctggg 372
>emb|CR667241.2|CNS0FDTB Tetraodon nigroviridis full-length cDNA Length = 1282 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 338 tggaggtgatgggcctgatgctggg 362
>emb|CR665456.2|CNS0FCFQ Tetraodon nigroviridis full-length cDNA Length = 1305 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 359 tggaggtgatgggcctgatgctggg 383
>emb|CR665024.2|CNS0FC3Q Tetraodon nigroviridis full-length cDNA Length = 1285 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 348 tggaggtgatgggcctgatgctggg 372
>emb|CR664253.1|CNS0FBIB Tetraodon nigroviridis full-length cDNA Length = 1197 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 311 tggaggtgatgggcctgatgctggg 335
>emb|CR664229.1|CNS0FBHN Tetraodon nigroviridis full-length cDNA Length = 1284 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 352 tggaggtgatgggcctgatgctggg 376
>emb|CR664067.2|CNS0FBD5 Tetraodon nigroviridis full-length cDNA Length = 1292 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 348 tggaggtgatgggcctgatgctggg 372
>emb|CR660170.2|CNS0F8CW Tetraodon nigroviridis full-length cDNA Length = 1300 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 356 tggaggtgatgggcctgatgctggg 380
>emb|CR658518.2|CNS0F730 Tetraodon nigroviridis full-length cDNA Length = 1301 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 360 tggaggtgatgggcctgatgctggg 384
>emb|CR653521.2|CNS0F387 Tetraodon nigroviridis full-length cDNA Length = 1555 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 337 tggaggtgatgggcctgatgctggg 361
>emb|CR648165.2|CNS0EZ3F Tetraodon nigroviridis full-length cDNA Length = 1276 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 336 tggaggtgatgggcctgatgctggg 360
>emb|CR647310.1|CNS0EYFO Tetraodon nigroviridis full-length cDNA Length = 1266 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 339 tggaggtgatgggcctgatgctggg 363
>emb|CR647437.2|CNS0EYJ7 Tetraodon nigroviridis full-length cDNA Length = 1277 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 346 tggaggtgatgggcctgatgctggg 370
>emb|CR646589.2|CNS0EXVN Tetraodon nigroviridis full-length cDNA Length = 1278 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 354 tggaggtgatgggcctgatgctggg 378
>emb|CR645283.2|CNS0EWVD Tetraodon nigroviridis full-length cDNA Length = 1267 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 331 tggaggtgatgggcctgatgctggg 355
>emb|CR641289.2|CNS0ETSF Tetraodon nigroviridis full-length cDNA Length = 1300 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 360 tggaggtgatgggcctgatgctggg 384
>emb|CR638316.1|CNS0ERHU Tetraodon nigroviridis full-length cDNA Length = 1258 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 332 tggaggtgatgggcctgatgctggg 356
>emb|CR636358.2|CNS0EPZG Tetraodon nigroviridis full-length cDNA Length = 1288 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctggg 188 ||||||||||||||||||||||||| Sbjct: 360 tggaggtgatgggcctgatgctggg 384
>ref|XM_774934.1| PREDICTED: Strongylocentrotus purpuratus similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, transcript variant 1 (LOC580426), mRNA Length = 1034 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 301 gacatgctcaagcagaccggaagacctgaaatggtggtaggctggtaccactcgcatcct 360 |||||||| |||||||| || | || || |||||||| || ||||| ||||| ||||| Sbjct: 390 gacatgctgaagcagacgggtcgtccagagatggtggtgggatggtatcactctcatcca 449 Query: 361 ggatttggttgctggctttcaggagttgacatcaatactcagcagagttttga 413 || || || |||||| | || || || |||||||| || |||||||||||||| Sbjct: 450 gggttcggatgctggttgtcgggcgtcgacatcaacacacagcagagttttga 502
>gb|AF014465.1|AF014465 Schistosoma mansoni Pad1 homolog (SmPOH) mRNA, complete cds Length = 1045 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 328 gaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagtt 387 |||||||| || || ||||| ||||| ||||||||||| ||||||||| | || || || Sbjct: 378 gaaatggttgtcggatggtatcactcacatcctggattcggttgctggttatctggtgtg 437 Query: 388 gacatcaatactcagcagagttttgaagc 416 || || ||||| || || ||||||||||| Sbjct: 438 gatatgaatacacaacaaagttttgaagc 466
>gb|AF014466.1|AF014466 Schistosoma mansoni trans-spliced variant protein (SmPOH.Trans) mRNA, partial cds Length = 527 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 328 gaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcaggagtt 387 |||||||| || || ||||| ||||| ||||||||||| ||||||||| | || || || Sbjct: 308 gaaatggttgtcggatggtatcactcacatcctggattcggttgctggttatctggtgtg 367 Query: 388 gacatcaatactcagcagagttttgaagc 416 || || ||||| || || ||||||||||| Sbjct: 368 gatatgaatacacaacaaagttttgaagc 396
>ref|XM_657004.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4492.2), mRNA Length = 1035 Score = 48.1 bits (24), Expect = 0.032 Identities = 120/152 (78%) Strand = Plus / Plus Query: 226 gtcttcgccatgccgcagagcgggaccggggtcagcgtcgaggccgtcgaccacgtcttc 285 ||||| || ||||| |||||||| || || ||||| ||||| || || |||| || ||| Sbjct: 244 gtctttgcgatgcctcagagcggtacaggcgtcagtgtcgaagctgttgaccctgtattc 303 Query: 286 cagaccaacatgctcgacatgctcaagcagaccggaagacctgaaatggtggtaggctgg 345 || || || ||| | |||||||| | ||| |||||| |||| ||| || || || ||| Sbjct: 304 caaacaaaaatgatggacatgcttaggcaaaccggacgaccggaacccgttgtcggttgg 363 Query: 346 taccactcgcatcctggatttggttgctggct 377 || |||||||||||||| ||||| |||||||| Sbjct: 364 tatcactcgcatcctgggtttggatgctggct 395
>gb|AF349677.1| Cochliobolus carbonum histone deacetylase 2 (HDC2) gene, complete cds Length = 2906 Score = 48.1 bits (24), Expect = 0.032 Identities = 75/92 (81%) Strand = Plus / Minus Query: 103 gtctacatctcctccctcgccctcctcaagatgctcaagcacgggagggccggcgtgccc 162 ||||||||||| || |||||||| ||||||||| | ||||| ||||||| ||||| Sbjct: 92 gtctacatctcttcgctcgccctactcaagatgttgcgacacggccgggccggtgtgcct 33 Query: 163 atggaggtgatgggcctgatgctgggcgagtt 194 ||||| || ||||| |||||| |||| ||||| Sbjct: 32 atggaagtcatgggactgatgttgggagagtt 1
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 |||||||||||||| ||| |||| || ||||| ||||||||||| Sbjct: 2579026 atggaggtgatggggctggtgcttggggagttggtcgacgacta 2578983
>gb|AY152546.1| Saccharomyces cerevisiae 26S proteasome regulatory subunit (RPN11) gene, RPN11-1 allele, complete cds Length = 921 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Plus Query: 130 aagatgctcaagcacgggagggccggcgtgcccatggaggtgatgggcctgatgctgggc 189 |||||||| ||||| || || ||||| || || ||||| |||||||| |||||| | ||| Sbjct: 106 aagatgctgaagcatggtagagccggtgttccaatggaagtgatgggactgatgttaggc 165 Query: 190 gagttcgt 197 |||||||| Sbjct: 166 gagttcgt 173
>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0571B09 Length = 147382 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 |||||||||||||| ||| |||| || ||||| ||||||||||| Sbjct: 93383 atggaggtgatggggctggtgcttggggagttggtcgacgacta 93340
>dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665F09 Length = 147102 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 163 atggaggtgatgggcctgatgctgggcgagttcgtcgacgacta 206 |||||||||||||| ||| |||| || ||||| ||||||||||| Sbjct: 140655 atggaggtgatggggctggtgcttggggagttggtcgacgacta 140612
>gb|BC003742.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, mRNA (cDNA clone MGC:5840 IMAGE:3599671), complete cds Length = 1460 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 563 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 621
>ref|NM_021526.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 (Psmd14), mRNA Length = 1479 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 579 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 637
>ref|XM_454588.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E14190g predicted mRNA Length = 936 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 466 aaggggaaagtggtcattgatgcattc 492 ||||| ||||||||||||||||||||| Sbjct: 457 aagggtaaagtggtcattgatgcattc 483
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 466 aaggggaaagtggtcattgatgcattc 492 ||||| ||||||||||||||||||||| Sbjct: 1252359 aagggtaaagtggtcattgatgcattc 1252333
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcagg 383 ||||| ||||| ||||| ||||| || |||||||||||| ||||||| Sbjct: 23006 gtaggatggtatcactcacatccaggttttggttgctggttttcagg 23052
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 46.1 bits (23), Expect = 0.13 Identities = 95/119 (79%) Strand = Plus / Minus Query: 130 aagatgctcaagcacgggagggccggcgtgcccatggaggtgatgggcctgatgctgggc 189 |||||||||||||| ||| |||| || | ||| | ||||| ||||| |||||||| || Sbjct: 80457 aagatgctcaagcatgggcgggcagggattcccctcgaggtcatgggactgatgcttgga 80398 Query: 190 gagttcgtcgacgactacacggtcagggtggtggatgtcttcgccatgccgcagagcgg 248 ||||| || ||||| ||||| || | ||| || || || || |||||||| |||||||| Sbjct: 80397 gagtttgttgacgaatacactgtgaaggtcgtcgacgtgtttgccatgcctcagagcgg 80339
>dbj|AK151733.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830035M05 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, full insert sequence Length = 1523 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 641 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 699
>dbj|AK150280.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830001F22 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, full insert sequence Length = 1477 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 594 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 652
>dbj|AK151104.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025D09 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, full insert sequence Length = 1523 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 641 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 699
>ref|XM_627672.1| Cryptosporidium parvum Iowa II 26S proteasome-associated Mov34/MPN/PAD-1 family. JAB domain. (cgd6_3270), partial mRNA Length = 948 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 337 gtaggctggtaccactcgcatcctggatttggttgctggctttcagg 383 ||||| ||||| ||||| ||||| || |||||||||||| ||||||| Sbjct: 343 gtaggatggtatcactcacatccaggttttggttgctggttttcagg 389
>dbj|AK078134.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330552E02 product:26S proteasome-associated pad1 homolog, full insert sequence Length = 1492 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 610 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 668
>dbj|AK031863.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330436B12 product:26S proteasome-associated pad1 homolog, full insert sequence Length = 1473 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 596 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 654
>dbj|AK012013.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610312C03 product:26S proteasome-associated pad1 homolog, full insert sequence Length = 1407 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 589 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 647
>dbj|AK011974.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610303K13 product:26S proteasome-associated pad1 homolog, full insert sequence Length = 1039 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 607 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 665
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 gcggcgcgaccgggatggggcag 63 ||||||||||||||||||||||| Sbjct: 2173452 gcggcgcgaccgggatggggcag 2173430
>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete sequence Length = 209914 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 139347 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 139405
>emb|Y13071.1|MM26SPROT Mus musculus mRNA for 26S proteasome non-ATPase subunit Length = 1479 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 358 cctggatttggttgctggctttcaggagttgacatcaatactcagcagagttttgaagc 416 ||||| ||||| || |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 579 cctggctttggctgttggctttctggtgtggatatcaacactcagcagagctttgaagc 637
>ref|XM_567446.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNJ02350) partial mRNA Length = 1368 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 339 aggctggtaccactcgcatcctggatttggttgctggctttcagga 384 ||||||||| ||||| || ||||||| ||| || |||||||||||| Sbjct: 425 aggctggtatcactcccaccctggatatggctgttggctttcagga 470
>gb|U00032.2| Caenorhabditis elegans cosmid F37A4, complete sequence Length = 50335 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctgggcgagttcgtcgacgactacac 209 ||||||||||||| |||||||| || || || || ||||||||||| Sbjct: 36619 tggaggtgatgggtctgatgctcggagactttgtggacgactacac 36664
>emb|AJ719811.1| Gallus gallus mRNA for hypothetical protein, clone 6l21 Length = 1481 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctgggc 189 ||||||||||||| |||||||||||| Sbjct: 369 tggaggtgatggggctgatgctgggc 394
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 gaccggggtcagcgtcgaggcc 270 |||||||||||||||||||||| Sbjct: 4868853 gaccggggtcagcgtcgaggcc 4868832
>ref|NM_066069.1| Caenorhabditis elegans F37A4.5 (F37A4.5) mRNA, complete cds Length = 960 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctgggcgagttcgtcgacgactacac 209 ||||||||||||| |||||||| || || || || ||||||||||| Sbjct: 146 tggaggtgatgggtctgatgctcggagactttgtggacgactacac 191
>ref|XM_393559.2| PREDICTED: Apis mellifera similar to ENSANGP00000013055 (LOC410072), mRNA Length = 1741 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 328 gaaatggtggtaggctggtaccactcgcatcctggatttggttgctggct 377 |||||||| ||||| ||||| || || ||||| ||||||||||| ||||| Sbjct: 977 gaaatggtagtaggatggtatcattctcatccaggatttggttgttggct 1026
>ref|NM_001039311.1| Gallus gallus similar to 38 kDa Mov34 homolog (LOC426579), mRNA Length = 1481 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 tggaggtgatgggcctgatgctgggc 189 ||||||||||||| |||||||||||| Sbjct: 369 tggaggtgatggggctgatgctgggc 394
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 44.1 bits (22), Expect = 0.50 Identities = 64/78 (82%) Strand = Plus / Plus Query: 324 acctgaaatggtggtaggctggtaccactcgcatcctggatttggttgctggctttcagg 383 ||||||||||||||| || ||||| || || |||||||| ||||| | |||| || || Sbjct: 70869 acctgaaatggtggttggttggtatcattcacatcctggttttggcttttggcgctctgg 70928 Query: 384 agttgacatcaatactca 401 |||||||| |||||||| Sbjct: 70929 ggttgacattaatactca 70946
>gb|AY692755.1| Saccharomyces cerevisiae clone FLH112885.01X YFR004W gene, complete cds Length = 921 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 329 aaatggtggtaggctggtaccactcgcatcctggatttggttgctggct 377 ||||||| || |||||||||||||| ||||| || ||||| || ||||| Sbjct: 305 aaatggtcgttggctggtaccactctcatccagggtttggctgttggct 353
>ref|XM_709968.1| Candida albicans SC5314 putative 26S proteasome regulatory particle subunit Rpn11p (CaO19.7264), mRNA Length = 939 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 tggtaccactcgcatcctggatttggttgctgg 375 |||||||||||||| ||||| ||||| |||||| Sbjct: 337 tggtaccactcgcaccctgggtttgggtgctgg 369
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 gagttcgtcgacgactacacggtca 214 ||||||| ||||||||||||||||| Sbjct: 1505006 gagttcggcgacgactacacggtca 1505030 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 gctcgacatgctcaagcaga 316 |||||||||||||||||||| Sbjct: 2714780 gctcgacatgctcaagcaga 2714799
>emb|X79561.1|SCMTP S.cerevisiae (GRF88) mpr1 gene Length = 921 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 329 aaatggtggtaggctggtaccactcgcatcctggatttggttgctggct 377 ||||||| || |||||||||||||| ||||| || ||||| || ||||| Sbjct: 305 aaatggtcgttggctggtaccactctcatccagggtttggctgttggct 353
>dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI complete DNA sequence Length = 270148 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 329 aaatggtggtaggctggtaccactcgcatcctggatttggttgctggct 377 ||||||| || |||||||||||||| ||||| || ||||| || ||||| Sbjct: 153691 aaatggtcgttggctggtaccactctcatccagggtttggctgttggct 153739
>gb|AY787218.1| Boletellus projectellus isolate AFTOL-ID 713 RNA polymerase II second largest subunit (RPB2) gene, partial cds Length = 2838 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ctgatgctgggcgagttcgtcgac 201 ||||||||||||||||| |||||| Sbjct: 1337 ctgatgctgggcgagtttgtcgac 1360
>ref|XM_468296.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2787 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gatgctgggcgagttcgtcg 199 |||||||||||||||||||| Sbjct: 48 gatgctgggcgagttcgtcg 67
>gb|AF488414.1| Pennisetum glaucum BAC 311G2 complete sequence Length = 123096 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ctcaagatgctcaagcacgg 146 |||||||||||||||||||| Sbjct: 85404 ctcaagatgctcaagcacgg 85385
>gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 map MAP_LOC, complete sequence Length = 200238 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 cctcctcaagatgctcaagc 142 |||||||||||||||||||| Sbjct: 98078 cctcctcaagatgctcaagc 98097
>gb|AY590263.1| Synthetic construct mutant collagen alpha 1(I) chain (Col1a1) gene, complete cds Length = 10461 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tctcctccctcgccctcctc 129 |||||||||||||||||||| Sbjct: 3567 tctcctccctcgccctcctc 3586
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcagcgtcgaggccgtcgac 276 |||||||||||||||||||| Sbjct: 921000 tcagcgtcgaggccgtcgac 920981
>ref|XM_453441.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D08503g predicted mRNA Length = 1122 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 340 ggctggtaccactcgcatcctggatttggttg 371 |||||||||||||| ||||| |||| |||||| Sbjct: 430 ggctggtaccactctcatccaggatatggttg 461
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 agagcgggaccggggtcagcgtcgaggc 269 |||||||| | ||||||||||||||||| Sbjct: 2800700 agagcgggtcgggggtcagcgtcgaggc 2800673
>emb|X98705.1|HSCOLPDGF H.sapiens DNA sequence of COL1A1 gene fused with intron 1 of PDGFB gene Length = 16814 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tctcctccctcgccctcctc 129 |||||||||||||||||||| Sbjct: 3757 tctcctccctcgccctcctc 3776
>gb|AC015909.14| Homo sapiens chromosome 17, clone RP11-893F2, complete sequence Length = 217746 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tctcctccctcgccctcctc 129 |||||||||||||||||||| Sbjct: 169206 tctcctccctcgccctcctc 169225
>ref|XM_773477.1| Giardia lamblia ATCC 50803 multidrug resistance protein (GLP_111_4773_5777) partial mRNA Length = 1005 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ggctggtaccactcgcatcc 359 |||||||||||||||||||| Sbjct: 349 ggctggtaccactcgcatcc 368
>emb|AL672311.26| Human DNA sequence from clone RP13-167H21 on chromosome X, complete sequence Length = 115998 Score = 40.1 bits (20), Expect = 7.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 110 tctcctccctcgccctcctcaagatgctcaag 141 |||||||||| ||||| ||||||||||||||| Sbjct: 111999 tctcctccct-gcccttctcaagatgctcaag 112029
>emb|AL135939.12| Human DNA sequence from clone RP3-481F12 on chromosome 20 Contains the SPO11 gene for SPO11 meiotic protein covalently bound to DSB (S. cerevisiae)-like protein, the 5' end of the RAE1 gene for an mRNA export protein, an MTND1 (NADH dehydrogenase subunit 1) pseudogene, a RPL39 (ribosomal protein L39) pseudogene and a CpG island, complete sequence Length = 66033 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gggatggggcagccggggac 71 |||||||||||||||||||| Sbjct: 11215 gggatggggcagccggggac 11234
>ref|XM_970644.1| PREDICTED: Tribolium castaneum similar to CG18174-PA, transcript variant 2 (LOC657072), mRNA Length = 1075 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 160 cccatggaggtgatgggcctgatgctgggcgagttc 195 |||||||| || |||||||||||| |||| |||||| Sbjct: 242 cccatggaagtcatgggcctgatgttgggtgagttc 277
>ref|XM_970158.1| PREDICTED: Tribolium castaneum similar to CG7453-PA, isoform A (LOC664144), mRNA Length = 612 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcgagttcgtcgacgactac 207 |||||||||||||||||||| Sbjct: 292 gcgagttcgtcgacgactac 311
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cgtcgacgactacacggtca 214 |||||||||||||||||||| Sbjct: 1071675 cgtcgacgactacacggtca 1071694
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 340 ggctggtaccactcgcatcctggatttggttg 371 |||||||||||||| ||||| |||| |||||| Sbjct: 726034 ggctggtaccactctcatccaggatatggttg 726065
>gb|AC097273.3| Genomic sequence for Mus musculus, clone RP23-118N13, complete sequence Length = 211657 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 gttgctggctttcaggagtt 387 |||||||||||||||||||| Sbjct: 98372 gttgctggctttcaggagtt 98353
>gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, complete sequence Length = 160573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggaggtgatgggcctgatgc 184 |||||||||||||||||||| Sbjct: 85567 ggaggtgatgggcctgatgc 85548
>ref|XM_688172.1| PREDICTED: Danio rerio similar to LOC495492 protein (LOC564849), mRNA Length = 1889 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 ctggatttggttgctggctttcag 382 |||||||||| ||||||||||||| Sbjct: 575 ctggatttggctgctggctttcag 598
>gb|AC154451.2| Mus musculus BAC clone RP24-171K15 from chromosome 13, complete sequence Length = 162744 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 acatcaatactcagcagagt 408 |||||||||||||||||||| Sbjct: 156049 acatcaatactcagcagagt 156068
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gatgctgggcgagttcgtcg 199 |||||||||||||||||||| Sbjct: 61350 gatgctgggcgagttcgtcg 61369
>gb|DQ366280.1| Boletellus shichianus isolate AFTOL-ID 532 RNA polymerase II second largest subunit (RPB2) gene, partial cds Length = 1066 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ctgatgctgggcgagttcgtcgac 201 ||||||||||||||||| |||||| Sbjct: 694 ctgatgctgggcgagtttgtcgac 717
>gb|DQ366279.1| Aureoboletus thibetanus isolate AFTOL-ID 450 RNA polymerase II second largest subunit (RPB2) gene, partial cds Length = 2174 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ctgatgctgggcgagttcgtcgac 201 ||||||||||||||||| |||||| Sbjct: 712 ctgatgctgggcgagtttgtcgac 735
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 aggccgtcgaccacgtcttc 285 |||||||||||||||||||| Sbjct: 556788 aggccgtcgaccacgtcttc 556807
>gb|AF017178.2|AF017178 Homo sapiens pro alpha 1(I) collagen (COL1A1) gene, complete cds Length = 18609 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tctcctccctcgccctcctc 129 |||||||||||||||||||| Sbjct: 1575 tctcctccctcgccctcctc 1594
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gacgactacacggtcagggt 218 |||||||||||||||||||| Sbjct: 4135707 gacgactacacggtcagggt 4135726
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gatgctgggcgagttcgtcg 199 |||||||||||||||||||| Sbjct: 34443849 gatgctgggcgagttcgtcg 34443830
>gb|AC154541.2| Mus musculus BAC clone RP23-458N20 from chromosome 13, complete sequence Length = 174991 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 acatcaatactcagcagagt 408 |||||||||||||||||||| Sbjct: 17637 acatcaatactcagcagagt 17656
>gb|AC104326.20| Mus musculus strain C57BL/6J chromosome 2 clone rp23-20g17, complete sequence Length = 232241 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gttgctggctttcaggagtt 387 |||||||||||||||||||| Sbjct: 33081 gttgctggctttcaggagtt 33100
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgtcgaggccgtcgaccacg 280 |||||||||||||||||||| Sbjct: 2484802 cgtcgaggccgtcgaccacg 2484821
>gb|AC099066.3| Homo sapiens chromosome 1 clone RP11-145A3, complete sequence Length = 149549 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cttggccaggagccacggca 539 |||||||||||||||||||| Sbjct: 91578 cttggccaggagccacggca 91559
>dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_C07 Length = 115190 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gatgctgggcgagttcgtcg 199 |||||||||||||||||||| Sbjct: 60091 gatgctgggcgagttcgtcg 60072
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gctgggcgagttcgtcgacg 202 |||||||||||||||||||| Sbjct: 2679880 gctgggcgagttcgtcgacg 2679899
>emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in linkage group 10, complete sequence Length = 243665 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 ctggatttggttgctggctttcag 382 |||||||||| ||||||||||||| Sbjct: 189148 ctggatttggctgctggctttcag 189171 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 ctggatttggttgctggctttcag 382 |||||||||| ||||||||||||| Sbjct: 147053 ctggatttggctgctggctttcag 147076
>gb|M20789.1|HUMC1A1 Human, alpha 1 collagen type I gene, exons 1-25, clone RMS-8 Length = 7616 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tctcctccctcgccctcctc 129 |||||||||||||||||||| Sbjct: 1271 tctcctccctcgccctcctc 1290
>gb|J03559.1|HUMCOLAI1A Human alpha-1 collagen type I gene, exon 1, clone pUC19-E Length = 2256 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tctcctccctcgccctcctc 129 |||||||||||||||||||| Sbjct: 2075 tctcctccctcgccctcctc 2094
>gb|J02829.1|HUMCG1A1P Human alpha-1(I) collagen gene, exons 1 and 2 (partial) Length = 1950 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tctcctccctcgccctcctc 129 |||||||||||||||||||| Sbjct: 1519 tctcctccctcgccctcctc 1538
>emb|AJ297367.1|GLA297367 Giardia lamblia mpr1 gene for non-ATPase subunit MPR1 of 26S proteasome Length = 949 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ggctggtaccactcgcatcc 359 |||||||||||||||||||| Sbjct: 356 ggctggtaccactcgcatcc 375 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,651,080 Number of Sequences: 3902068 Number of extensions: 3651080 Number of successful extensions: 72191 Number of sequences better than 10.0: 220 Number of HSP's better than 10.0 without gapping: 218 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 70921 Number of HSP's gapped (non-prelim): 1247 length of query: 574 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 551 effective length of database: 17,143,297,704 effective search space: 9445957034904 effective search space used: 9445957034904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
