ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6j17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic ... 54 6e-07
2THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.... 52 2e-06
3THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: P... 51 4e-06
4THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: P... 42 0.002
5THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A... 39 0.016
6THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II... 38 0.035
7THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxi... 37 0.046
8THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.... 37 0.046
9THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin... 37 0.046
10THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-... 36 0.13
11THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I) ... 35 0.30
12THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains: Alp... 33 1.1
13THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 t... 31 4.3
14THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: L... 30 7.4
15ANGT_MOUSE (P11859) Angiotensinogen precursor [Contains: Angiote... 30 7.4
16DDX18_HUMAN (Q9NVP1) ATP-dependent RNA helicase DDX18 (EC 3.6.1.... 30 7.4
17THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contai... 30 9.7

>THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic protein]|
          Length = 133

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 298
           Q +A  CC        Y  CR  + ++++ C  +S   I +  GT C  GY    ++   
Sbjct: 21  QVEAKICCPRTIDRNIYNACRL-TGASMTNCANLSGCKIVS--GTTCPPGYTHDILQNYG 77

Query: 299 LQVN-YCKLGCTASLCNKVTPSGND-------AMERCTSECHDLCTKNGVEIAQ 436
             VN YCKLGC +S+C  +T   N        A+ +CT+ C + CTK   ++ +
Sbjct: 78  DAVNEYCKLGCASSVCGALTTLKNSMQVNCEGAVSQCTNACSNFCTKGSAKVVE 131



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>THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic|
           protein]
          Length = 134

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 298
           Q +A  CC   D    YF C     S  S+   +      N + T C  GY +  +E   
Sbjct: 21  QVEAKICCPTKDDRSVYFVCML---SVSSQFYCLLKSKCKNTSQTICPPGYTNDILENSG 77

Query: 299 LQVN-YCKLGCTASLCNKVTPSGN--------DAMERCTSECHDLCT 412
             VN YCKLGC +S+C  +T   N        +A+E+CT  C  +CT
Sbjct: 78  DAVNEYCKLGCASSVCGALTTLQNFDTSKVLSEAVEQCTKACSSVCT 124



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>THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: Probable|
           thionin-2.3; Acidic protein]
          Length = 135

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 41/118 (34%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYF-DCRAKSDSTVSECCGVSAGYISNDAGTECKSG--YIDIEKV 295
           Q +A   CC   S    F DC   S+  +   C   +G      G  C SG  Y  +   
Sbjct: 21  QVEAQKTCCPSQSTRKEFEDCI--SEGNLQILCSAESGCRDTYVGY-CPSGFPYGSLTNS 77

Query: 296 SLQVN-YCKLGCTASLC------NKVTPSG--NDAMERCTSECHDLCTKNGVEIAQVV 442
              VN YCKLGC +SLC       K+  SG  N A+ERCT  C  +CTK      + V
Sbjct: 78  GDVVNVYCKLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKACSTICTKGSKTAVETV 135



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>THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: Probable|
           thionin-2.4; Acidic protein]
          Length = 134

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 37/117 (31%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 298
           Q  A+ CC  + +   Y  C     S  S     S   IS      C  GY +  +E   
Sbjct: 21  QVDANICCPSIQARTFYNACLFAVGSPSSCIRNSSCLDISEST---CPRGYTNDILENTG 77

Query: 299 LQVN-YCKLGCTASLCNKVT--------PSGNDAMERCTSECHDLCTK---NGVEIA 433
             V  YCKLGC +S+C  +T           N  +E+CT  C  +CTK   N VE A
Sbjct: 78  DAVTEYCKLGCVSSVCGALTILQNSDASEIVNGEVEKCTMACSTVCTKGSMNAVENA 134



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>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)|
           [Contains: Alpha-1-purothionin; Acidic protein]
           (Fragment)
          Length = 126

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304
           Q +   CC        Y  CRA+    +  C GV    IS+  G  C  G+    K++L+
Sbjct: 13  QVEGKSCCRSTLGRNCYNLCRARGAQKL--CAGVCRCKISS--GLSCPKGF---PKLALE 65

Query: 305 VN--------YCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 409
            N        YC LGC +S+C+ +  +  D       +E C   C   C
Sbjct: 66  SNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFC 114



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>THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II) [Contains:|
           Alpha-hordothionin; Acidic protein]
          Length = 127

 Score = 37.7 bits (86), Expect = 0.035
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304
           Q +   CC        Y  CR +    +  C GV    +++    +C +G+  +  VS  
Sbjct: 15  QVEGKSCCRSTLGRNCYNLCRVRGAQKL--CAGVCRCKLTSSG--KCPTGFPKLALVSNS 70

Query: 305 -----VNYCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 409
                V YC LGC AS+C+ +  +  D       +E C   C + C
Sbjct: 71  DEPDTVKYCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFC 116



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>THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxin A3; Acidic|
           protein]
          Length = 111

 Score = 37.4 bits (85), Expect = 0.046
 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304
           Q ++  CC +      Y  CR  + +    C  +S   I +  G+ C S Y         
Sbjct: 23  QVESKSCCPNTTGRNIYNACRL-TGAPRPTCAKLSGCKIIS--GSTCPSDYPKF------ 73

Query: 305 VNYCKLGCTASLCNKVTPSGNDA-MERCTSECHDLC 409
             YC LGC +S C   T S  DA   RC + C DLC
Sbjct: 74  --YCTLGCESSQC--ATNSNGDAEAVRCKTACSDLC 105



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>THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.1; Acidic|
           protein]
          Length = 134

 Score = 37.4 bits (85), Expect = 0.046
 Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 298
           Q +A  CC    +   Y  CR +       C  VS G  ++D    C  G+++  +E  +
Sbjct: 21  QVEAKICCPSNQARNGYSVCRIRFSK--GRCMQVS-GCQNSDT---CPRGWVNAILENSA 74

Query: 299 LQVN-YCKLGCTASLCNKVTPSGND--------AMERCTSECHDLCTKNGV 424
              N +CKLGC  S+C  +    N         A E+C   C   CTK+ V
Sbjct: 75  DATNEHCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYV 125



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>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic|
           protein] (Fragment)
          Length = 103

 Score = 37.4 bits (85), Expect = 0.046
 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
 Frame = +2

Query: 122 QQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSL 301
           +  ++  CC +      Y  CR    S   E C   +G     A T C S Y        
Sbjct: 2   RNVESKSCCPNTTGRNIYNTCRLGGGSR--ERCASLSGCKIISAST-CPSDYPKF----- 53

Query: 302 QVNYCKLGCTASLCNKVTPSGNDAME----RCTSECHDLC 409
              YC LGC +S C  +T   N  ++    RC + C +LC
Sbjct: 54  ---YCTLGCQSSKCASITTPPNSEVDAEAVRCKAACSNLC 90



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>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;|
           Acidic protein]
          Length = 136

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304
           Q +   CC        Y  CR +      + C  +A      +G +C S +  +  VS  
Sbjct: 24  QVEGKSCCRSTLGRNCYNLCRVRG---AQKLCA-NACRCKLTSGLKCPSSFPKLALVSNS 79

Query: 305 -----VNYCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 409
                ++YC LGC AS+C+ +  +  D       +E C+  C + C
Sbjct: 80  DEPDTIDYCNLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFC 125



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>THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I)|
           (Beta-purothionin) [Contains: Purothionin A-1; Acidic
           protein]
          Length = 136

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304
           Q +   CC        Y  CRA+    +  C  V    +++  G  C     D  K+ L+
Sbjct: 24  QVEGKSCCKSTLGRNCYNLCRARGAQKL--CANVCRCKLTS--GLSCPK---DFPKLVLE 76

Query: 305 VN--------YCKLGCTASLCNKVTPSGND--AMERCTSECHDLC 409
            N        YC LGC +SLC+ +  +  D   M+    +C D C
Sbjct: 77  SNSDEPDTMEYCNLGCRSSLCDYIVNAAADDEEMKLYVEQCGDAC 121



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>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:|
           Alpha-2-purothionin; Acidic protein]
          Length = 136

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSD----STVSECCGVSAGYISNDAGTECKSGYIDIEK 292
           Q +   CC        Y  CR++      STV  C   S        G  C  G+    K
Sbjct: 24  QVEGKSCCRTTLGRNCYNLCRSRGAQKLCSTVCRCKLTS--------GLSCPKGF---PK 72

Query: 293 VSLQVN--------YCKLGCTASLCNKVTPSGND--AMERCTSECHDLC 409
           ++L+ N        YC LGC +S+C+ +  +  D   M+     C D C
Sbjct: 73  LALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDAC 121



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>THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 thionin (Type V|
           thionin); Acidic protein]
          Length = 131

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
 Frame = +2

Query: 200 STVSEC-----CGVSAGYISNDAGTECKSGYIDIEKVSLQVNYCKLGCTASLCNKVTPSG 364
           STV +C     C + AG  S  +  E  +           + YC LGC +S+C+ +  + 
Sbjct: 50  STVFQCADFCACRLPAGLASVRSSDEPNA-----------IEYCSLGCRSSVCDNMINTA 98

Query: 365 NDAME-------RCTSECHDLC 409
           +++ E       RC   C   C
Sbjct: 99  DNSTEEMKLYVKRCGVACDSFC 120



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>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific|
           thionin; Acidic protein]
          Length = 137

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 10/118 (8%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGY--IDIEKVS 298
           Q +A  CC +      Y  CR    S     C  + G     +G  C   Y  +++   S
Sbjct: 25  QVEAKSCCKNTTGRNCYNACRFAGGSR--PVCATACG-CKIISGPTCPRDYPKLNLLPES 81

Query: 299 LQVN---YCKLGCTASLCNKV--TPSGNDA---MERCTSECHDLCTKNGVEIAQVVVA 448
            + N   YC +GC  S+C+ +     G +    M  C++ C   C  N  E+ Q V A
Sbjct: 82  GEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFC--NDGEVIQSVEA 137



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>ANGT_MOUSE (P11859) Angiotensinogen precursor [Contains: Angiotensin-1|
           (Angiotensin I) (Ang I); Angiotensin-2 (Angiotensin II)
           (Ang II); Angiotensin-3 (Angiotensin III) (Ang III)
           (Des-Asp[1]-angiotensin II)]
          Length = 477

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 210 QSAAVFPPAIYQTTLELNASPVILI*RKFHYKSTTASWGARLP 338
           QS A+F PA++  +L+L+  PV+   +   +      W   LP
Sbjct: 215 QSLALFTPALFPRSLDLSTDPVLATEKINRFIKAVTGWKMNLP 257



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>DDX18_HUMAN (Q9NVP1) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box|
           protein 18) (Myc-regulated DEAD box protein) (MrDb)
          Length = 670

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
 Frame = +2

Query: 332 ASLCNKVTPSGNDAMERCTSECHDLCTKNGVEIAQVVVA*LVMARSCIGQARQG-----V 496
           ASLCN V  +   A++       ++   N  EI    +  L+  R  +  A+ G      
Sbjct: 180 ASLCNLVNENTLKAIK-------EMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLA 232

Query: 497 FVLPSITGCRIQDQYMS-NVTCVAILAPIRLMRCMTHPPARIYSAHHIRCFCCILG 661
           F++P++    ++ ++M  N T V IL+P R +   T    +    HH+  +  I+G
Sbjct: 233 FLIPAVE-LIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 287



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>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:|
           Leaf-specific thionin BTH6; Acidic protein]
          Length = 137

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 10/110 (9%)
 Frame = +2

Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304
           Q +   CC    +   Y  CR    S    C G     I +  G +C S Y  +  +   
Sbjct: 25  QVEGKSCCKDTLARNCYNTCRFAGGSR-PVCAGACRCKIIS--GPKCPSDYPKLNLLPES 81

Query: 305 -----VNYCKLGCTASLCNKVTP--SGNDA---MERCTSECHDLCTKNGV 424
                  YC +GCT S+C+ +     G +    M  C++ C   C    V
Sbjct: 82  GEPDVTQYCTIGCTNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAV 131


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,310,604
Number of Sequences: 219361
Number of extensions: 2095856
Number of successful extensions: 5498
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5490
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7309604013
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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