| Clone Name | bags6j17 |
|---|---|
| Clone Library Name | barley_pub |
>THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic protein]| Length = 133 Score = 53.5 bits (127), Expect = 6e-07 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 10/114 (8%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 298 Q +A CC Y CR + ++++ C +S I + GT C GY ++ Sbjct: 21 QVEAKICCPRTIDRNIYNACRL-TGASMTNCANLSGCKIVS--GTTCPPGYTHDILQNYG 77 Query: 299 LQVN-YCKLGCTASLCNKVTPSGND-------AMERCTSECHDLCTKNGVEIAQ 436 VN YCKLGC +S+C +T N A+ +CT+ C + CTK ++ + Sbjct: 78 DAVNEYCKLGCASSVCGALTTLKNSMQVNCEGAVSQCTNACSNFCTKGSAKVVE 131
>THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic| protein] Length = 134 Score = 51.6 bits (122), Expect = 2e-06 Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 11/107 (10%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 298 Q +A CC D YF C S S+ + N + T C GY + +E Sbjct: 21 QVEAKICCPTKDDRSVYFVCML---SVSSQFYCLLKSKCKNTSQTICPPGYTNDILENSG 77 Query: 299 LQVN-YCKLGCTASLCNKVTPSGN--------DAMERCTSECHDLCT 412 VN YCKLGC +S+C +T N +A+E+CT C +CT Sbjct: 78 DAVNEYCKLGCASSVCGALTTLQNFDTSKVLSEAVEQCTKACSSVCT 124
>THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: Probable| thionin-2.3; Acidic protein] Length = 135 Score = 50.8 bits (120), Expect = 4e-06 Identities = 41/118 (34%), Positives = 51/118 (43%), Gaps = 12/118 (10%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYF-DCRAKSDSTVSECCGVSAGYISNDAGTECKSG--YIDIEKV 295 Q +A CC S F DC S+ + C +G G C SG Y + Sbjct: 21 QVEAQKTCCPSQSTRKEFEDCI--SEGNLQILCSAESGCRDTYVGY-CPSGFPYGSLTNS 77 Query: 296 SLQVN-YCKLGCTASLC------NKVTPSG--NDAMERCTSECHDLCTKNGVEIAQVV 442 VN YCKLGC +SLC K+ SG N A+ERCT C +CTK + V Sbjct: 78 GDVVNVYCKLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKACSTICTKGSKTAVETV 135
>THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: Probable| thionin-2.4; Acidic protein] Length = 134 Score = 41.6 bits (96), Expect = 0.002 Identities = 37/117 (31%), Positives = 48/117 (41%), Gaps = 14/117 (11%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 298 Q A+ CC + + Y C S S S IS C GY + +E Sbjct: 21 QVDANICCPSIQARTFYNACLFAVGSPSSCIRNSSCLDISEST---CPRGYTNDILENTG 77 Query: 299 LQVN-YCKLGCTASLCNKVT--------PSGNDAMERCTSECHDLCTK---NGVEIA 433 V YCKLGC +S+C +T N +E+CT C +CTK N VE A Sbjct: 78 DAVTEYCKLGCVSSVCGALTILQNSDASEIVNGEVEKCTMACSTVCTKGSMNAVENA 134
>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)| [Contains: Alpha-1-purothionin; Acidic protein] (Fragment) Length = 126 Score = 38.9 bits (89), Expect = 0.016 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 14/109 (12%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304 Q + CC Y CRA+ + C GV IS+ G C G+ K++L+ Sbjct: 13 QVEGKSCCRSTLGRNCYNLCRARGAQKL--CAGVCRCKISS--GLSCPKGF---PKLALE 65 Query: 305 VN--------YCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 409 N YC LGC +S+C+ + + D +E C C C Sbjct: 66 SNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFC 114
>THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II) [Contains:| Alpha-hordothionin; Acidic protein] Length = 127 Score = 37.7 bits (86), Expect = 0.035 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 11/106 (10%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304 Q + CC Y CR + + C GV +++ +C +G+ + VS Sbjct: 15 QVEGKSCCRSTLGRNCYNLCRVRGAQKL--CAGVCRCKLTSSG--KCPTGFPKLALVSNS 70 Query: 305 -----VNYCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 409 V YC LGC AS+C+ + + D +E C C + C Sbjct: 71 DEPDTVKYCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFC 116
>THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxin A3; Acidic| protein] Length = 111 Score = 37.4 bits (85), Expect = 0.046 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 1/96 (1%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304 Q ++ CC + Y CR + + C +S I + G+ C S Y Sbjct: 23 QVESKSCCPNTTGRNIYNACRL-TGAPRPTCAKLSGCKIIS--GSTCPSDYPKF------ 73 Query: 305 VNYCKLGCTASLCNKVTPSGNDA-MERCTSECHDLC 409 YC LGC +S C T S DA RC + C DLC Sbjct: 74 --YCTLGCESSQC--ATNSNGDAEAVRCKTACSDLC 105
>THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.1; Acidic| protein] Length = 134 Score = 37.4 bits (85), Expect = 0.046 Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 11/111 (9%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 298 Q +A CC + Y CR + C VS G ++D C G+++ +E + Sbjct: 21 QVEAKICCPSNQARNGYSVCRIRFSK--GRCMQVS-GCQNSDT---CPRGWVNAILENSA 74 Query: 299 LQVN-YCKLGCTASLCNKVTPSGND--------AMERCTSECHDLCTKNGV 424 N +CKLGC S+C + N A E+C C CTK+ V Sbjct: 75 DATNEHCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYV 125
>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic| protein] (Fragment) Length = 103 Score = 37.4 bits (85), Expect = 0.046 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 4/100 (4%) Frame = +2 Query: 122 QQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSL 301 + ++ CC + Y CR S E C +G A T C S Y Sbjct: 2 RNVESKSCCPNTTGRNIYNTCRLGGGSR--ERCASLSGCKIISAST-CPSDYPKF----- 53 Query: 302 QVNYCKLGCTASLCNKVTPSGNDAME----RCTSECHDLC 409 YC LGC +S C +T N ++ RC + C +LC Sbjct: 54 ---YCTLGCQSSKCASITTPPNSEVDAEAVRCKAACSNLC 90
>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;| Acidic protein] Length = 136 Score = 35.8 bits (81), Expect = 0.13 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 11/106 (10%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304 Q + CC Y CR + + C +A +G +C S + + VS Sbjct: 24 QVEGKSCCRSTLGRNCYNLCRVRG---AQKLCA-NACRCKLTSGLKCPSSFPKLALVSNS 79 Query: 305 -----VNYCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 409 ++YC LGC AS+C+ + + D +E C+ C + C Sbjct: 80 DEPDTIDYCNLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFC 125
>THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I)| (Beta-purothionin) [Contains: Purothionin A-1; Acidic protein] Length = 136 Score = 34.7 bits (78), Expect = 0.30 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 10/105 (9%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304 Q + CC Y CRA+ + C V +++ G C D K+ L+ Sbjct: 24 QVEGKSCCKSTLGRNCYNLCRARGAQKL--CANVCRCKLTS--GLSCPK---DFPKLVLE 76 Query: 305 VN--------YCKLGCTASLCNKVTPSGND--AMERCTSECHDLC 409 N YC LGC +SLC+ + + D M+ +C D C Sbjct: 77 SNSDEPDTMEYCNLGCRSSLCDYIVNAAADDEEMKLYVEQCGDAC 121
>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:| Alpha-2-purothionin; Acidic protein] Length = 136 Score = 32.7 bits (73), Expect = 1.1 Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 14/109 (12%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSD----STVSECCGVSAGYISNDAGTECKSGYIDIEK 292 Q + CC Y CR++ STV C S G C G+ K Sbjct: 24 QVEGKSCCRTTLGRNCYNLCRSRGAQKLCSTVCRCKLTS--------GLSCPKGF---PK 72 Query: 293 VSLQVN--------YCKLGCTASLCNKVTPSGND--AMERCTSECHDLC 409 ++L+ N YC LGC +S+C+ + + D M+ C D C Sbjct: 73 LALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDAC 121
>THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 thionin (Type V| thionin); Acidic protein] Length = 131 Score = 30.8 bits (68), Expect = 4.3 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 12/82 (14%) Frame = +2 Query: 200 STVSEC-----CGVSAGYISNDAGTECKSGYIDIEKVSLQVNYCKLGCTASLCNKVTPSG 364 STV +C C + AG S + E + + YC LGC +S+C+ + + Sbjct: 50 STVFQCADFCACRLPAGLASVRSSDEPNA-----------IEYCSLGCRSSVCDNMINTA 98 Query: 365 NDAME-------RCTSECHDLC 409 +++ E RC C C Sbjct: 99 DNSTEEMKLYVKRCGVACDSFC 120
>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific| thionin; Acidic protein] Length = 137 Score = 30.0 bits (66), Expect = 7.4 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 10/118 (8%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGY--IDIEKVS 298 Q +A CC + Y CR S C + G +G C Y +++ S Sbjct: 25 QVEAKSCCKNTTGRNCYNACRFAGGSR--PVCATACG-CKIISGPTCPRDYPKLNLLPES 81 Query: 299 LQVN---YCKLGCTASLCNKV--TPSGNDA---MERCTSECHDLCTKNGVEIAQVVVA 448 + N YC +GC S+C+ + G + M C++ C C N E+ Q V A Sbjct: 82 GEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFC--NDGEVIQSVEA 137
>ANGT_MOUSE (P11859) Angiotensinogen precursor [Contains: Angiotensin-1| (Angiotensin I) (Ang I); Angiotensin-2 (Angiotensin II) (Ang II); Angiotensin-3 (Angiotensin III) (Ang III) (Des-Asp[1]-angiotensin II)] Length = 477 Score = 30.0 bits (66), Expect = 7.4 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +3 Query: 210 QSAAVFPPAIYQTTLELNASPVILI*RKFHYKSTTASWGARLP 338 QS A+F PA++ +L+L+ PV+ + + W LP Sbjct: 215 QSLALFTPALFPRSLDLSTDPVLATEKINRFIKAVTGWKMNLP 257
>DDX18_HUMAN (Q9NVP1) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) (Myc-regulated DEAD box protein) (MrDb) Length = 670 Score = 30.0 bits (66), Expect = 7.4 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 6/116 (5%) Frame = +2 Query: 332 ASLCNKVTPSGNDAMERCTSECHDLCTKNGVEIAQVVVA*LVMARSCIGQARQG-----V 496 ASLCN V + A++ ++ N EI + L+ R + A+ G Sbjct: 180 ASLCNLVNENTLKAIK-------EMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLA 232 Query: 497 FVLPSITGCRIQDQYMS-NVTCVAILAPIRLMRCMTHPPARIYSAHHIRCFCCILG 661 F++P++ ++ ++M N T V IL+P R + T + HH+ + I+G Sbjct: 233 FLIPAVE-LIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 287
>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:| Leaf-specific thionin BTH6; Acidic protein] Length = 137 Score = 29.6 bits (65), Expect = 9.7 Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 10/110 (9%) Frame = +2 Query: 125 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 304 Q + CC + Y CR S C G I + G +C S Y + + Sbjct: 25 QVEGKSCCKDTLARNCYNTCRFAGGSR-PVCAGACRCKIIS--GPKCPSDYPKLNLLPES 81 Query: 305 -----VNYCKLGCTASLCNKVTP--SGNDA---MERCTSECHDLCTKNGV 424 YC +GCT S+C+ + G + M C++ C C V Sbjct: 82 GEPDVTQYCTIGCTNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAV 131 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,310,604 Number of Sequences: 219361 Number of extensions: 2095856 Number of successful extensions: 5498 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 5292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5490 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)