Clone Name	bags6j11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	412	e-115
2	RL3A_ARATH (P17094) 60S ribosomal protein L3	395	e-110
3	RL3B_ARATH (P22738) 60S ribosomal protein L3	392	e-109
4	RL3_TOXCA (P49149) 60S ribosomal protein L3	290	4e-78
5	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	287	2e-77
6	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	287	2e-77
7	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	285	7e-77
8	RL3_DROME (O16797) 60S ribosomal protein L3	285	1e-76
9	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	284	2e-76
10	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	284	2e-76
11	RL3_BOVIN (P39872) 60S ribosomal protein L3	283	3e-76
12	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	280	2e-75
13	RL3_NEUCR (P59671) 60S ribosomal protein L3	280	2e-75
14	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	278	9e-75
15	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	278	1e-74
16	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	277	2e-74
17	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	277	3e-74
18	RL3_DICDI (P34113) 60S ribosomal protein L3	276	6e-74
19	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	275	7e-74
20	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	275	7e-74
21	RL3_CAEEL (P50880) 60S ribosomal protein L3	272	6e-73
22	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	271	2e-72
23	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	268	2e-71
24	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	264	2e-70
25	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	234	1e-61
26	RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)	169	6e-42
27	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	159	6e-39
28	RL3_PYRHO (O59418) 50S ribosomal protein L3P	157	4e-38
29	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	156	6e-38
30	RL3_METJA (P54014) 50S ribosomal protein L3P	152	1e-36
31	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	150	3e-36
32	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	150	4e-36
33	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	147	2e-35
34	RL3_ARCFU (O28354) 50S ribosomal protein L3P	147	4e-35
35	RL3_METTH (O26110) 50S ribosomal protein L3P	138	1e-32
36	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	134	3e-31
37	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	132	8e-31
38	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	131	2e-30
39	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	131	2e-30
40	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	129	6e-30
41	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	127	2e-29
42	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	126	5e-29
43	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	125	2e-28
44	RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P	124	2e-28
45	RL3_NANEQ (P60458) 50S ribosomal protein L3P	124	4e-28
46	RL3_THEVO (Q97BX7) 50S ribosomal protein L3P	123	6e-28
47	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	120	5e-27
48	RL3_CLOTE (Q890N9) 50S ribosomal protein L3	53	8e-07
49	RL3_ENTFA (Q839G4) 50S ribosomal protein L3	51	3e-06
50	RL3_CLOAB (Q97EH8) 50S ribosomal protein L3	50	5e-06
51	RL3_PORGI (Q7MTL3) 50S ribosomal protein L3	49	1e-05
52	RL3_BACST (P28600) 50S ribosomal protein L3	49	1e-05
53	RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor	49	1e-05
54	RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3	47	4e-05
55	RL3_BACTN (Q8A476) 50S ribosomal protein L3	47	7e-05
56	RL3_BIFLO (Q8G417) 50S ribosomal protein L3	46	1e-04
57	RL3_BACCR (Q81J42) 50S ribosomal protein L3	46	1e-04
58	RL3_BACAN (Q81VT0) 50S ribosomal protein L3	46	1e-04
59	RL3_LISMO (Q8Y440) 50S ribosomal protein L3	45	3e-04
60	RL3_LISMF (Q71WE6) 50S ribosomal protein L3	45	3e-04
61	RL3_LISIN (Q927K7) 50S ribosomal protein L3	45	3e-04
62	RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3	45	3e-04
63	RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3	44	4e-04
64	RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)	44	5e-04
65	RL3_STRP6 (Q5XED5) 50S ribosomal protein L3	44	6e-04
66	RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3	44	6e-04
67	RL3_TROWT (Q83FY6) 50S ribosomal protein L3	44	6e-04
68	RL3_TROW8 (Q83I78) 50S ribosomal protein L3	44	6e-04
69	RL3_THETN (Q8R7V4) 50S ribosomal protein L3	44	6e-04
70	RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3	44	6e-04
71	RL3_THEMA (P38515) 50S ribosomal protein L3	43	8e-04
72	RL3_SPIKU (P60457) 50S ribosomal protein L3	43	8e-04
73	RK3_GUITH (O46894) Chloroplast 50S ribosomal protein L3	43	0.001
74	RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.001
75	RL3_STRP8 (P60452) 50S ribosomal protein L3	42	0.001
76	RL3_STRP3 (P60451) 50S ribosomal protein L3	42	0.001
77	RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3	42	0.001
78	RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3	42	0.001
79	RL3_MYCPU (Q98PY0) 50S ribosomal protein L3	42	0.001
80	RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3	42	0.002
81	RL3_AQUAE (O66431) 50S ribosomal protein L3	42	0.002
82	RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.002
83	RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.002
84	RL3_STRMU (Q8DS16) 50S ribosomal protein L3	42	0.002
85	RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) ...	42	0.002
86	RL3_STAAC (Q5HDV8) 50S ribosomal protein L3	41	0.003
87	RL3_CORDI (P60453) 50S ribosomal protein L3	41	0.003
88	RL3_STAAW (P60450) 50S ribosomal protein L3	41	0.003
89	RL3_STAAS (Q6G771) 50S ribosomal protein L3	41	0.003
90	RL3_STAAR (Q6GEI3) 50S ribosomal protein L3	41	0.003
91	RL3_STAAN (P60449) 50S ribosomal protein L3	41	0.003
92	RL3_STAAM (P60448) 50S ribosomal protein L3	41	0.003
93	RL3_LEPIN (Q9XD36) 50S ribosomal protein L3	41	0.004
94	RL3_LEPIC (Q72NG1) 50S ribosomal protein L3	41	0.004
95	RL3_MYCCT (P10134) 50S ribosomal protein L3	40	0.007
96	RL3_GEOSL (P60454) 50S ribosomal protein L3	40	0.007
97	RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3	40	0.007
98	RL3_STRPN (Q97SV5) 50S ribosomal protein L3	40	0.007
99	RL3_THETH (P52860) 50S ribosomal protein L3	40	0.009
100	RL3_THET8 (Q5SHN8) 50S ribosomal protein L3	40	0.009
101	RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast prec...	39	0.011
102	RL3_CORGL (Q8NT09) 50S ribosomal protein L3	39	0.011
103	RL3_STAES (Q8CRG0) 50S ribosomal protein L3	39	0.011
104	RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3	39	0.011
105	RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3	39	0.015
106	RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3	39	0.015
107	RL3_NEIMB (P60444) 50S ribosomal protein L3	39	0.015
108	RL3_NEIMA (P60443) 50S ribosomal protein L3	39	0.015
109	RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precurs...	39	0.020
110	RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3	39	0.020
111	RL3_VIBPA (Q87T13) 50S ribosomal protein L3	38	0.033
112	RL3_COREF (Q8FS80) 50S ribosomal protein L3	38	0.033
113	RL3_WIGBR (Q8D212) 50S ribosomal protein L3	38	0.033
114	RL3_BUCBP (Q89A68) 50S ribosomal protein L3	37	0.044
115	RL3_BORPE (Q7VTD3) 50S ribosomal protein L3	37	0.044
116	RL3_BORPA (Q7W2F6) 50S ribosomal protein L3	37	0.044
117	RL3_BORBR (Q7WRC5) 50S ribosomal protein L3	37	0.044
118	RL3_MYCTU (P60442) 50S ribosomal protein L3	37	0.057
119	RL3_MYCBO (P60441) 50S ribosomal protein L3	37	0.057
120	RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3	37	0.057
121	RL3_VIBVU (Q8DE39) 50S ribosomal protein L3	37	0.057
122	RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3	37	0.057
123	RL3_BUCAP (Q8K950) 50S ribosomal protein L3	37	0.057
124	RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3	37	0.057
125	RL3_CHLCV (Q824Q1) 50S ribosomal protein L3	37	0.057
126	RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast prec...	37	0.074
127	RL3_TREPA (O83219) 50S ribosomal protein L3	37	0.074
128	RL3_MYCGA (O52332) 50S ribosomal protein L3	37	0.074
129	RL3_BORBU (P94267) 50S ribosomal protein L3	37	0.074
130	RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3	36	0.097
131	RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3	36	0.097
132	RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3	36	0.097
133	RL3_LACPL (Q88XY6) 50S ribosomal protein L3	36	0.13
134	RL3_MYCLE (P30762) 50S ribosomal protein L3	36	0.13
135	RL3_COXBU (Q83ES4) 50S ribosomal protein L3	35	0.17
136	RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial prec...	35	0.17
137	RL3_XANCP (Q8PC49) 50S ribosomal protein L3	35	0.17
138	RL3_XANAC (Q8PNS4) 50S ribosomal protein L3	35	0.17
139	RL3_BRAPL (Q9FA04) 50S ribosomal protein L3	35	0.22
140	RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)	35	0.22
141	RL3_HAEIN (P44344) 50S ribosomal protein L3	35	0.22
142	RL3_BUCAI (P57591) 50S ribosomal protein L3	35	0.28
143	RL3_STRAW (Q82DP5) 50S ribosomal protein L3	34	0.37
144	RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3	34	0.37
145	RL3_LACLA (Q9CDW2) 50S ribosomal protein L3	34	0.37
146	RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3	34	0.37
147	RL3_PSESM (Q889X1) 50S ribosomal protein L3	34	0.37
148	RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3	34	0.48
149	RL3_PASMU (Q9CL32) 50S ribosomal protein L3	34	0.48
150	RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3	34	0.48
151	RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3	34	0.48
152	RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3	34	0.48
153	RL3_XYLFA (Q9PE76) 50S ribosomal protein L3	34	0.48
154	RL3_CHLTR (O84533) 50S ribosomal protein L3	33	0.63
155	RL3_XYLFT (Q87E82) 50S ribosomal protein L3	33	0.63
156	RL3_MYCGE (P47397) 50S ribosomal protein L3	33	0.82
157	FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal bo...	33	0.82
158	RL3_RALSO (Q8XV12) 50S ribosomal protein L3	33	0.82
159	RL3_NITEU (Q82X88) 50S ribosomal protein L3	33	0.82
160	RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3	33	1.1
161	RL3_MYCPN (P75580) 50S ribosomal protein L3	33	1.1
162	RL3_YERPS (P11252) 50S ribosomal protein L3	32	1.4
163	RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3	32	1.4
164	RL3_PSEPK (Q88QN5) 50S ribosomal protein L3	32	1.4
165	FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal bo...	32	1.4
166	RL3_STRCO (Q9L0E0) 50S ribosomal protein L3	32	1.8
167	RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3	32	1.8
168	RL3_ONYPE (P60455) 50S ribosomal protein L3	32	1.8
169	RL3_SHIFL (P60447) 50S ribosomal protein L3	32	2.4
170	RL3_SALTY (P60446) 50S ribosomal protein L3	32	2.4
171	RL3_SALTI (P60445) 50S ribosomal protein L3	32	2.4
172	RL3_ECOLI (P60438) 50S ribosomal protein L3	32	2.4
173	RL3_ECOL6 (P60439) 50S ribosomal protein L3	32	2.4
174	RL3_ECO57 (P60440) 50S ribosomal protein L3	32	2.4
175	RL3_SHEON (Q8EK68) 50S ribosomal protein L3	32	2.4
176	CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (...	31	3.1
177	SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat...	31	3.1
178	RL3_BRAJA (Q89J84) 50S ribosomal protein L3	31	4.1
179	HOY1_YARLI (Q99160) Homeobox protein HOY1	31	4.1
180	PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)	30	5.3
181	SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat...	30	5.3
182	RL3_PROMM (Q7V542) 50S ribosomal protein L3	30	5.3
183	RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)	30	5.3
184	RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)	30	5.3
185	RL3_RHOBA (Q7UN20) 50S ribosomal protein L3	30	7.0
186	PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)	30	9.1
187	RK3_ODOSI (P49569) Chloroplast 50S ribosomal protein L3	30	9.1

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>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  412 bits (1059), Expect(2) = e-115
 Identities = 199/209 (95%), Positives = 204/209 (97%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKYA++VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGY FFEKE+P+DAVF
Sbjct: 152 MKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVF 211

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ
Sbjct: 212 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 271

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
           NGYHHRTEMNKKVYKIGK GQE+H A TEFDRTEKDITPMGGFPHYGVVK DYLMIKGCC
Sbjct: 272 NGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCC 331

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           VGPKKRVVTLRQSLLKQTSRLALEEIKLK
Sbjct: 332 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 360



 Score = 23.5 bits (49), Expect(2) = e-115
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 3   ALXYDSDAGKXXKSXMQLE 59
           AL YDSDAGK  +  MQLE
Sbjct: 133 ALKYDSDAGK-KEIQMQLE 150

---

>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  395 bits (1016), Expect = e-110
 Identities = 186/209 (88%), Positives = 201/209 (96%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKYATV+RV+AHTQIRKMKGLKQKKAH+MEIQINGGTIA KVD+ Y+FFEK++PI+AVF
Sbjct: 152 MKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVF 211

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ
Sbjct: 212 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 271

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
           NGYHHRTE+NKK+Y++GKVG E H A TE+DRTEKD+TPMGGFPHYG+VK DYLMIKGCC
Sbjct: 272 NGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCC 331

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           VGPKKRVVTLRQSLL QTSRLALEEIKLK
Sbjct: 332 VGPKKRVVTLRQSLLTQTSRLALEEIKLK 360

---

>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  392 bits (1008), Expect = e-109
 Identities = 186/209 (88%), Positives = 199/209 (95%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY +V+RV+AHTQIRKMKGLKQKKAHL EIQINGG IA KVDY  + FEK+VP+DA+F
Sbjct: 152 MKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIF 211

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ
Sbjct: 212 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 271

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
           NGYHHRTEMNKKVY++GKVGQETH A TE+DRTEKDITPMGGFPHYG+VK DYLMIKGCC
Sbjct: 272 NGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCC 331

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           VGPKKRVVTLRQ+LLKQTSRLA+EEIKLK
Sbjct: 332 VGPKKRVVTLRQTLLKQTSRLAMEEIKLK 360

---

>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  290 bits (741), Expect = 4e-78
 Identities = 134/212 (63%), Positives = 172/212 (81%), Gaps = 3/212 (1%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY + +RVIAHTQ++ MK  ++KKAH+MEIQINGGT+A+KVD+     EK+VP+D+VF
Sbjct: 152 MKKYCSKIRVIAHTQMKVMKH-REKKAHIMEIQINGGTVAEKVDWAREHLEKQVPVDSVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID IGVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ
Sbjct: 211 AQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 595
            GYHHRTE+NKK+Y++GK     +   +  T++D TEK + PMGGFPHYG+V  D++MI+
Sbjct: 271 KGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYGLVNQDFVMIR 330

Query: 596 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           GCCVG KKR +TLR+SL+ QT R A E+I LK
Sbjct: 331 GCCVGSKKRPITLRKSLIVQTKRFAHEKINLK 362

---

>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  287 bits (735), Expect = 2e-77
 Identities = 140/209 (66%), Positives = 170/209 (81%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKYA+VVRV+AHTQ+RK   L QKKAHL EIQ+NGG++++KVD+    FEK V +D+VF
Sbjct: 152 IKKYASVVRVLAHTQVRKTP-LVQKKAHLAEIQLNGGSVSEKVDWAREHFEKTVSVDSVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +++EMID+I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V +TVARAGQ
Sbjct: 211 EQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWTVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
           NGYHHRT +N KVY+IGK G E  +A+TEFDRT+K ITPMGGF HYG V  D++M+KG  
Sbjct: 271 NGYHHRTSINHKVYRIGKGGDE-GNAATEFDRTKKTITPMGGFVHYGAVNNDFVMVKGSI 329

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            G +KRVVTLR+SL   TSR ALEE+ LK
Sbjct: 330 PGTRKRVVTLRKSLYTSTSRRALEEVNLK 358

---

>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  287 bits (735), Expect = 2e-77
 Identities = 138/209 (66%), Positives = 171/209 (81%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKY TVVRV+AHTQIRK   LKQKKAHLMEIQ+NGG++ADKVD+  N FEK + ID++F
Sbjct: 152 IKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSVADKVDFARNLFEKPIEIDSIF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +KDEMID+I VTKG G++GV +RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ
Sbjct: 211 EKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
            GYHHRT  N KV++IGK G +  +AST+FD ++K ITPMGGF  YG VK DY+M+KG  
Sbjct: 271 MGYHHRTSCNHKVFRIGK-GSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIMVKGSV 329

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            G KKRV+TLR++L  QTSR A E+++LK
Sbjct: 330 PGVKKRVMTLRKTLYPQTSRRATEKVELK 358

---

>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  285 bits (730), Expect = 7e-77
 Identities = 139/215 (64%), Positives = 176/215 (81%), Gaps = 6/215 (2%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY  V+R+IAHTQ+R +  L+QKKAHLMEIQ+NGGT+A+K+D+     E++VP++ VF
Sbjct: 152 MKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV++TVARAGQ
Sbjct: 211 GQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFTVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 586
            GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF HYG V  D++
Sbjct: 271 KGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFI 330

Query: 587 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           M+KGC VG KKRV+TLR+SLL QT R ALE+I LK
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLK 365

---

>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  285 bits (728), Expect = 1e-76
 Identities = 139/216 (64%), Positives = 170/216 (78%), Gaps = 7/216 (3%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           M +Y  V+RVIAH+QIR +K  +QKKAH+MEIQ+NGG+I DKV +     EK + +  VF
Sbjct: 152 MLRYCKVIRVIAHSQIRLIKQ-RQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID +GVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ
Sbjct: 211 GQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYGVVKADY 583
            GYHHRTE+NKK+Y+IG  G  T D       ASTE+D T+K ITPMGGFPHYG V  D+
Sbjct: 271 KGYHHRTEINKKIYRIG-AGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDF 329

Query: 584 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           +MIKGCC+G KKR++TLR+SLLK T R ALE+IKLK
Sbjct: 330 VMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLK 365

---

>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  284 bits (726), Expect = 2e-76
 Identities = 138/215 (64%), Positives = 176/215 (81%), Gaps = 6/215 (2%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY  V+R+IAHTQ+R +  L+QKKAHLMEIQ+NGGT+A+K+D+     E++VP++ VF
Sbjct: 152 MKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+++VARAGQ
Sbjct: 211 GQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 586
            GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF HYG V  D++
Sbjct: 271 KGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFI 330

Query: 587 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           M+KGC VG KKRV+TLR+SLL QT R ALE+I LK
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLK 365

---

>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  284 bits (726), Expect = 2e-76
 Identities = 139/215 (64%), Positives = 176/215 (81%), Gaps = 6/215 (2%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY  V+RVIAHTQ+R +  L+QKKAHLMEIQ+NGGT+A+K+D+     E++VP++ VF
Sbjct: 152 MKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+++VARAGQ
Sbjct: 211 GQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 586
            GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF HYG V  D++
Sbjct: 271 KGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFV 330

Query: 587 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           M+KGC VG KKRV+TLR+SLL QT R ALE+I LK
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLK 365

---

>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  283 bits (724), Expect = 3e-76
 Identities = 138/215 (64%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY  V+RVIAHTQ+R +  L+QKKAHLME+Q+NGGT+A+K+D+     E++VP+  VF
Sbjct: 152 MKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+++VARAGQ
Sbjct: 211 GQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 586
            GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF HYG V  D++
Sbjct: 271 KGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFV 330

Query: 587 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           M+KGC VG KKRV+TLR+SLL QT R ALE+I LK
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLK 365

---

>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  280 bits (717), Expect = 2e-75
 Identities = 133/209 (63%), Positives = 168/209 (80%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKYA+VVRV+ HTQ+RK   L QKKAHL EIQ+NGG+++DKVD+    FEK V +D+VF
Sbjct: 151 IKKYASVVRVLVHTQVRKTP-LSQKKAHLAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVF 209

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +++EMID++ VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ
Sbjct: 210 EQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQ 269

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
            GYHHRT +N KVY++GK G +  +A+TEFDRT+K ITPMGGF HYG +  D++++KG  
Sbjct: 270 RGYHHRTSINHKVYRVGK-GDDEANAATEFDRTKKTITPMGGFVHYGAINNDFVILKGSI 328

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            G +KRVVTLR+SL   TSR ALEE+ LK
Sbjct: 329 PGTRKRVVTLRKSLYTNTSRKALEEVTLK 357

---

>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  280 bits (717), Expect = 2e-75
 Identities = 135/209 (64%), Positives = 167/209 (79%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKY TVVRV+AHTQIRK   LKQKKAHLMEIQINGG++ADKV++G+  FEK V ID++F
Sbjct: 152 IKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQINGGSVADKVEFGHGLFEKPVSIDSIF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +KDE+ID+I VTKG G+ GV  RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ
Sbjct: 211 EKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
            GYHHRT +N K+Y+IGK G     A+TE D T+K ITPMGGF  YG +  D++M+KG  
Sbjct: 271 AGYHHRTSVNHKIYRIGK-GDAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVMVKGSV 329

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            G KKRV+TLR+S+   TSR ALE+++LK
Sbjct: 330 PGVKKRVMTLRKSMFVHTSRKALEKVELK 358

---

>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  278 bits (712), Expect = 9e-75
 Identities = 138/215 (64%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY  V+RVIAHTQ+R +  L+QKKAHLMEIQ+NGGT+A+K+D+     E++VP++ VF
Sbjct: 152 MKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGA HPARV+++VARAGQ
Sbjct: 211 GQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFSVARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 586
            GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I P+GGF HYG V  D++
Sbjct: 271 KGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFV 330

Query: 587 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           M+KGC VG KKRV+TLR+SLL QT R ALE+I LK
Sbjct: 331 MLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLK 365

---

>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  278 bits (710), Expect = 1e-74
 Identities = 133/209 (63%), Positives = 166/209 (79%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKYA+VVRV+ HTQIRK   L QKKAHL EIQ+NGG+I++KVD+    FEK V +D+VF
Sbjct: 150 IKKYASVVRVLVHTQIRKTP-LAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVF 208

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +++EMID I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ
Sbjct: 209 EQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQ 268

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
            GYH RT +N K+Y++GK G +  + +T FDRT+K ITPMGGF HYG +K D++M+KGC 
Sbjct: 269 RGYHSRTSINHKIYRVGK-GDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCI 327

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            G +KR+VTLR+SL   TSR ALEE+ LK
Sbjct: 328 PGNRKRIVTLRKSLYTNTSRKALEEVSLK 356

---

>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  277 bits (709), Expect = 2e-74
 Identities = 133/209 (63%), Positives = 164/209 (78%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKYA+VVRV+AHTQI+K   L QKKAHL EIQ+NGG+++DKVD+    FEK V +D+VF
Sbjct: 151 IKKYASVVRVLAHTQIKKTP-LAQKKAHLAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVF 209

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +KDEM+D+  VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V +TVARAGQ
Sbjct: 210 EKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVARAGQ 269

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
           NG+HHRT +N KVY++G  G E+  A TEFDRT+K I PMGGF  YG VK D++++KG  
Sbjct: 270 NGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNVKNDFMLLKGSI 328

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            G KKR+VT+R+SL   TSR A E + LK
Sbjct: 329 PGVKKRIVTIRKSLYVDTSRRATENVNLK 357

---

>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  277 bits (708), Expect = 3e-74
 Identities = 135/209 (64%), Positives = 166/209 (79%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKYATVVRV+ HTQ+RK   L QKKAHL EIQ+NGG+I++KVD+    FEK V +D+VF
Sbjct: 151 IKKYATVVRVLVHTQVRKTP-LVQKKAHLAEIQLNGGSISEKVDWAREHFEKTVSVDSVF 209

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +++EMID I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ
Sbjct: 210 EQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQ 269

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
            GYHHRT +N K+Y+IGK G +  +A+T FDRT+K I PMGGF HYG+V  D++M+KG  
Sbjct: 270 RGYHHRTSINHKIYRIGK-GDDEGNAATNFDRTKKTINPMGGFVHYGMVNNDFVMVKGSI 328

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            G KKRVVTLR+SL   TSR A+EE+ LK
Sbjct: 329 PGCKKRVVTLRKSLYTNTSRKAVEEVTLK 357

---

>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  276 bits (705), Expect = 6e-74
 Identities = 132/213 (61%), Positives = 167/213 (78%), Gaps = 4/213 (1%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KK  +VVRVIAHTQ+ K+K L QKKAH++EIQ+NGG+I +KV++    FEK V +  VF
Sbjct: 153 IKKRCSVVRVIAHTQVHKLK-LTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVF 211

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ
Sbjct: 212 AENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQ 271

Query: 425 NGYHHRTEMNKKVYKIGKV----GQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 592
            GYHHR E NKK+Y+IG+     G++     TEFD TEK I PMGGF HYG+VK ++LM+
Sbjct: 272 LGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLML 331

Query: 593 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           KGC  GP+KR +TLR+S+  QT R ALE+I LK
Sbjct: 332 KGCVAGPRKRALTLRKSITTQTGRAALEKITLK 364

---

>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  275 bits (704), Expect = 7e-74
 Identities = 135/209 (64%), Positives = 164/209 (78%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKY +VVRV+AHTQIRK   L QKKAHLMEIQ+NGG++ADKV++    FEK V I + F
Sbjct: 150 IKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTF 208

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +++EMID+IGVT+GKG EG   RWG  RLPRKTHRGLRKVACIGAWHPA V +TVARAG 
Sbjct: 209 EQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGN 268

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
            GY HRT++N K+Y+IG  G +  +AST+FD TEK ITPMGGF  YGVV+ D++M+ G  
Sbjct: 269 AGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGAT 327

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            GP KRV+TLR+SLL  TSR ALE + LK
Sbjct: 328 PGPVKRVLTLRKSLLTHTSRKALEPVSLK 356

---

>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  275 bits (704), Expect = 7e-74
 Identities = 135/209 (64%), Positives = 164/209 (78%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKY +VVRV+AHTQIRK   L QKKAHLMEIQ+NGG++ADKV++    FEK V I + F
Sbjct: 150 IKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTF 208

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
           +++EMID+IGVT+GKG EG   RWG  RLPRKTHRGLRKVACIGAWHPA V +TVARAG 
Sbjct: 209 EQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGN 268

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
            GY HRT++N K+Y+IG  G +  +AST+FD TEK ITPMGGF  YGVV+ D++M+ G  
Sbjct: 269 AGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGAT 327

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
            GP KRV+TLR+SLL  TSR ALE + LK
Sbjct: 328 PGPVKRVLTLRKSLLTHTSRKALEPVSLK 356

---

>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  272 bits (696), Expect = 6e-73
 Identities = 127/212 (59%), Positives = 169/212 (79%), Gaps = 3/212 (1%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKY + +RVIAHTQ++ ++  +QKKAHL+EIQ+NGGTI  KVD+     EK+V +D VF
Sbjct: 153 LKKYCSSIRVIAHTQMKILRR-RQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVF 211

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID IGVT+G G++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV++TVARAGQ
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271

Query: 425 NGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 595
            G+HHRT +N K+Y+IGK     +  ++ STEFD T+K ITPMGGFP YG+V  DY+M++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331

Query: 596 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           G  +GPKKR++TLR+SL+ QT R+A E+I LK
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVAHEKINLK 363

---

>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  271 bits (692), Expect = 2e-72
 Identities = 127/212 (59%), Positives = 168/212 (79%), Gaps = 3/212 (1%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +KKY + +RVIAHTQ++ ++  +QKKAHL+EIQINGGTI  KVD+     EK++ +D VF
Sbjct: 153 LKKYCSSIRVIAHTQMKILRR-RQKKAHLVEIQINGGTIEQKVDWAREHLEKQIQVDTVF 211

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            +DEMID IGVTKG G++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV++TVARAGQ
Sbjct: 212 SQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271

Query: 425 NGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 595
            G+HHRT +N K+Y+IGK     +  ++ STEFD T+K I PMGGFP YG+V  DY+M++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQDYVMLR 331

Query: 596 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           G  +GPKKR++TLR+SL+ QT R+A E+I LK
Sbjct: 332 GAILGPKKRLITLRKSLITQTKRVAHEKINLK 363

---

>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  268 bits (684), Expect = 2e-71
 Identities = 129/216 (59%), Positives = 166/216 (76%), Gaps = 7/216 (3%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY  V+RVI HTQ+ K+   +QKKAH+ME+Q+NGGT+A+KV +     EK+VP+ +VF
Sbjct: 152 MKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEVQLNGGTVAEKVAWAQARLEKQVPVHSVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            ++E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ
Sbjct: 211 SQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYGVVKADY 583
            GYHHRTE+NKK+Y+IG+ G    D       AST +D T+K ITP+GGFPHYG V  D+
Sbjct: 271 KGYHHRTELNKKIYRIGR-GLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYGEVNNDF 329

Query: 584 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           +M+KGC  G KKRV+TLR+SLL   SR ALE I+LK
Sbjct: 330 VMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELK 365

---

>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  264 bits (675), Expect = 2e-70
 Identities = 128/216 (59%), Positives = 164/216 (75%), Gaps = 7/216 (3%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           MKKY  V+RVI HTQ+ K+   +QKKAH+MEIQ+NGGT+A+KV +     EK+VP+ +VF
Sbjct: 152 MKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVF 210

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
            + E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ
Sbjct: 211 SQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQ 270

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYGVVKADY 583
            GYHHRTE+NKK+++IG+ G    D       AST +D T K ITP+GGFPHYG V  D+
Sbjct: 271 KGYHHRTELNKKIFRIGR-GPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDF 329

Query: 584 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           +M+KGC  G KKRV+TLR+SLL   SR A+E I+LK
Sbjct: 330 VMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELK 365

---

>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score =  234 bits (598), Expect = 1e-61
 Identities = 118/209 (56%), Positives = 155/209 (74%)
 Frame = +2

Query: 65  MKKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVF 244
           +K+ A  VRV+  TQ   +KGL  KKAH+ EIQ+NGG+I++KV++     EKE+ I  VF
Sbjct: 146 IKERAHCVRVLVQTQPTLIKGLGLKKAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVF 205

Query: 245 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 424
             +E ID IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP+RV Y++ARAGQ
Sbjct: 206 GVNENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQ 265

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 604
            G+H RTE NK+VY I   G  + +  TEFD TEK I+PMGGFPHYG V+ D++M+KG  
Sbjct: 266 MGFHRRTEKNKRVYMI---GNGSSNIKTEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAV 322

Query: 605 VGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           VG +KRVVTLR+SLL+Q    A EE+ +K
Sbjct: 323 VGARKRVVTLRKSLLRQR---AGEELVIK 348

---

>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)|
          Length = 130

 Score =  169 bits (429), Expect = 6e-42
 Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 6/129 (4%)
 Frame = +2

Query: 224 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 403
           VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR ++
Sbjct: 2   VPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAF 61

Query: 404 TVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYG 565
           +VARAGQ GYHHRTE+NKK+YKIG     K G+   ++  T++D ++K I P+G F HYG
Sbjct: 62  SVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYG 121

Query: 566 VVKADYLMI 592
            V  D++M+
Sbjct: 122 EVTNDFVML 130

---

>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score =  159 bits (403), Expect = 6e-39
 Identities = 82/187 (43%), Positives = 118/187 (63%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           VR I  TQ   +K   +KK  +ME  I G ++ +K +Y      KE+ +  V ++ E++D
Sbjct: 163 VRAIVATQPWVIK--LKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLD 220

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRT 445
           +I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRT
Sbjct: 221 VIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRT 280

Query: 446 EMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRV 625
           E+NK++  IG+ G+   D +TE      +ITP GGFPHYG+V++D++MI G   G  KR+
Sbjct: 281 ELNKRLIAIGENGKLKLDENTEI-----EITPKGGFPHYGIVRSDFMMIAGSVPGAIKRI 335

Query: 626 VTLRQSL 646
           + +R ++
Sbjct: 336 IRVRPAI 342

---

>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score =  157 bits (396), Expect = 4e-38
 Identities = 80/187 (42%), Positives = 115/187 (61%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           VR +  TQ   +K   +KK  +ME  I G ++ +K +Y      KE+ +  V ++ E++D
Sbjct: 161 VRALVSTQPWVIK--LKKKPEVMEYAIGGTSVEEKFNYIKEKLGKEIRVGEVLKEGELLD 218

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRT 445
           +I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRT
Sbjct: 219 VIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRT 278

Query: 446 EMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRV 625
           E+NK++  IG+ G+         D  E +ITP GGFPHYG+V+ D++MI G   G  KR+
Sbjct: 279 ELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRI 332

Query: 626 VTLRQSL 646
           + +R ++
Sbjct: 333 IRVRPAI 339

---

>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score =  156 bits (394), Expect = 6e-38
 Identities = 80/187 (42%), Positives = 116/187 (62%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           VR +  TQ   +K   +KK  +ME  I G ++ +K +Y      KE+ +  V ++ E++D
Sbjct: 160 VRALVATQPWVIK--LKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLD 217

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRT 445
           +I VTKGKG +G V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRT
Sbjct: 218 VIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRT 277

Query: 446 EMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRV 625
           E+NK++  IG+ G+         D  E +ITP GGFPHYG+V++D++MI G   G  KR+
Sbjct: 278 ELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRI 331

Query: 626 VTLRQSL 646
           + +R ++
Sbjct: 332 IRVRPAI 338

---

>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score =  152 bits (383), Expect = 1e-36
 Identities = 82/201 (40%), Positives = 120/201 (59%), Gaps = 2/201 (0%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           VRV+ HT   K+  L +KK  ++EI+I G  I ++++Y      K++ I  VFQ+ E++D
Sbjct: 139 VRVLVHTN-PKLTCLPKKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVD 197

Query: 266 IIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHH 439
            IGVTKGKG++G V RWGV  +  +   +G+ R V  IG W P  V ++V   GQ GYH 
Sbjct: 198 TIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQ 257

Query: 440 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 619
           RTE NK++ KIG  G E              ITP GGF HYGV++ +Y+++KG   GP K
Sbjct: 258 RTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVIRNNYVVLKGSVQGPAK 303

Query: 620 RVVTLRQSLLKQTSRLALEEI 682
           R++ LR+++  Q   + + EI
Sbjct: 304 RLIVLRRAIRPQEPLIKVPEI 324

---

>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score =  150 bits (380), Expect = 3e-36
 Identities = 80/189 (42%), Positives = 115/189 (60%), Gaps = 2/189 (1%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           +RVI  TQ +K  G+ +KK  +ME +I G  + ++ +Y      +E+    VF + E++D
Sbjct: 145 IRVIVATQPKKA-GVPKKKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVD 203

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYHH 439
           +  +TKGKG++GVV RWGVT   RKT R    R +  IG   P+RV +TV  AGQ GYH 
Sbjct: 204 VSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQ 263

Query: 440 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 619
           RTE NK++ KIG+ G+E              +TP GGF +YGVV+ DY+MI G   GPKK
Sbjct: 264 RTEHNKRILKIGEDGEE--------------VTPRGGFVNYGVVRGDYIMIHGTVPGPKK 309

Query: 620 RVVTLRQSL 646
           R++ +R ++
Sbjct: 310 RLIRVRPAV 318

---

>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score =  150 bits (379), Expect = 4e-36
 Identities = 83/189 (43%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           VR++ HTQ   + GLK KK  +ME  I G  +  K DY      KE+    V  + E++D
Sbjct: 143 VRLLVHTQ-PWLIGLK-KKPEVMEYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLD 200

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYHH 439
           +I VTKGKG +G V RWGV     K  R    R +  +G WHPARV +TV +AGQ G+HH
Sbjct: 201 VIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHH 260

Query: 440 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 619
           RTE NK++  IG+ G+         D  E +ITP GGFPHYG+V++D+LMI+G   G  K
Sbjct: 261 RTEFNKRLIAIGENGK------LVLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFK 314

Query: 620 RVVTLRQSL 646
           R++ +R ++
Sbjct: 315 RIIRVRPAI 323

---

>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score =  147 bits (372), Expect = 2e-35
 Identities = 80/201 (39%), Positives = 117/201 (58%), Gaps = 2/201 (0%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           +RVI HT   K  G+ +KK  ++EI++ G ++A+K+ Y  +   K + I+ VF+  E ID
Sbjct: 138 LRVIVHTN-PKTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDVFETGEFID 196

Query: 266 IIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHH 439
            + VTKGKG++G V RWGV  +  +   +G+ R+   IG W P RV +TV  AGQ G+H 
Sbjct: 197 TLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQ 256

Query: 440 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 619
           RTE NK++ K+G  G E              ITP GGF +YG VK  Y+++KG   GP K
Sbjct: 257 RTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302

Query: 620 RVVTLRQSLLKQTSRLALEEI 682
           R+V LR ++     +  L E+
Sbjct: 303 RLVVLRGAVRPAEDKFGLPEV 323

---

>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score =  147 bits (370), Expect = 4e-35
 Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 2/192 (1%)
 Frame = +2

Query: 77  ATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDE 256
           A+ VRV+ +TQ   + G+ +K   +ME +I GG + + +DY  +   KE+ +  VF +  
Sbjct: 132 ASEVRVVTYTQPYLITGVPKKVPDVMEHRI-GGNVEEALDYAISKLGKEISVSEVFDEGA 190

Query: 257 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVARAGQNG 430
           +ID+I VTKGKG++G V RWGV  L  K  R    R+V  +G W+P  V +TV +AGQ G
Sbjct: 191 IIDVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHHVRWTVPQAGQMG 250

Query: 431 YHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVG 610
           +H RTE NK++ KIG+ G+E              ITP GGF HYGV++  Y+++ G   G
Sbjct: 251 FHQRTEYNKRLIKIGENGEE--------------ITPKGGFLHYGVIRTQYVLVTGSVPG 296

Query: 611 PKKRVVTLRQSL 646
           P KR++ +R ++
Sbjct: 297 PVKRLIRMRDAI 308

---

>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score =  138 bits (348), Expect = 1e-32
 Identities = 77/195 (39%), Positives = 108/195 (55%), Gaps = 3/195 (1%)
 Frame = +2

Query: 71  KYATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQK 250
           +Y   VRVI HT  R +  + +KK  + E  + G T  +K +Y      K+V    +F +
Sbjct: 134 EYVADVRVIVHTNPR-LASVPKKKPEVFECGLGGKTPEEKFEYALEILGKDVRASEIFSE 192

Query: 251 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVARAGQ 424
              +D I VTKGKG++G V RWG+     K  R    R +  +G W P+R  +TV +AGQ
Sbjct: 193 GAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWTPSRTMWTVPQAGQ 252

Query: 425 NGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD-ITPMGGFPHYGVVKADYLMIKGC 601
            GYH RTE NK++ KIG             D +E D + P GGF  YG+V+ DY+MIKG 
Sbjct: 253 MGYHRRTEYNKQILKIG-------------DASEADLVNPDGGFVRYGLVRNDYVMIKGS 299

Query: 602 CVGPKKRVVTLRQSL 646
             GP KR+V LR+++
Sbjct: 300 VPGPTKRLVVLRKAI 314

---

>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score =  134 bits (336), Expect = 3e-31
 Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 3/190 (1%)
 Frame = +2

Query: 77  ATVVRVIAHTQIRKMKGLKQKKAHLMEIQING-GTIADKVDYGYNFFEKEVPIDAVFQKD 253
           A  VR +  TQ   + G+ +K   L+EI I G  ++ +++++  +   K V    VF   
Sbjct: 140 AVDVRALVATQPH-LSGIGKKTPELLEIPIGGVPSVDERINFAISLLGKTVSPKDVFTPG 198

Query: 254 EMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQN 427
           +++D+I VTKGKGY+GV+ R+GVT LPR  K  +G R+   IG   PA V +T  R GQ 
Sbjct: 199 QLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQM 257

Query: 428 GYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCV 607
           G+H RTE NK++ KIG+ G E              ITP  GFPHYGVVK  Y++I+G   
Sbjct: 258 GFHQRTEYNKRLLKIGENGAE--------------ITPKSGFPHYGVVKGPYILIQGSVP 303

Query: 608 GPKKRVVTLR 637
           G +KR+V LR
Sbjct: 304 GARKRLVVLR 313

---

>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score =  132 bits (333), Expect = 8e-31
 Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
 Frame = +2

Query: 89  RVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDI 268
           R++  TQ RK+  L +K   L+EIQI GG    ++DY  N   KE+ I  VF++ ++ID+
Sbjct: 158 RLLVSTQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDV 217

Query: 269 IGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 442
           +GVTKGKG+ GV+ R+ V  LPR  K  +G RK+   G       SYT  + GQ G+H R
Sbjct: 218 VGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRR 275

Query: 443 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 622
           TE NK++ KIG                 K+I P GGF  YG+V+  Y++++G  +G KKR
Sbjct: 276 TEYNKRIIKIGD--------------EPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKR 321

Query: 623 VVTLRQ 640
            + LR+
Sbjct: 322 PIFLRE 327

---

>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score =  131 bits (330), Expect = 2e-30
 Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           +RV+  TQ + +  L +KK  ++E+Q+ GG I  +++Y  N   K + +  VF++ ++ID
Sbjct: 149 LRVLIATQPKLVPSLGKKKPEIVEVQVGGGDIKSQLNYVLNILGKPLSVKDVFKEGQLID 208

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 439
           IIGVTKGKG++GVV R+GV  LPR  K  +G RKV   G    +  SY V + GQ GYH 
Sbjct: 209 IIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSF-STPSY-VPQPGQMGYHR 266

Query: 440 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 619
           RTE NK++ KI                   +I P GGF +YG+V+  YL+I+G  +G KK
Sbjct: 267 RTEYNKRILKISD--------------DPNEINPKGGFVNYGIVRNTYLIIEGSIIGAKK 312

Query: 620 RVVTLR 637
           R + LR
Sbjct: 313 RPLFLR 318

---

>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score =  131 bits (330), Expect = 2e-30
 Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           VR + +T  + + G+ +K   +ME  I+   +  K +Y        V +  VF+   ++D
Sbjct: 141 VRAVIYTLPKSLTGVPKKVPDIMESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVD 200

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSYTVARAGQNGYHH 439
              +T GKG +G V RWG+  +  K  R   LR+V  +GA++P+RVS+ V + GQ GYH 
Sbjct: 201 TAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYHQ 260

Query: 440 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 619
           RTE NK++ KIG  G+E              +TP GGF +YG+V+ DY++IKG   GP K
Sbjct: 261 RTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYILIKGSVPGPSK 306

Query: 620 RVVTLRQSL 646
           R++ LR  +
Sbjct: 307 RLIRLRDPI 315

---

>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score =  129 bits (325), Expect = 6e-30
 Identities = 73/188 (38%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
 Frame = +2

Query: 80  TVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEM 259
           T +R++  TQ   +  L +K+  ++EIQI GG+I D+++YG +   K++P+  VF++ ++
Sbjct: 146 TYMRLLVSTQPWLVPSLGKKRPEIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQL 205

Query: 260 IDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGY 433
            DIIGVTKGKG++GV+ R+ V   PR  K  +G RK+   G    +  SY V + GQ G+
Sbjct: 206 TDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGP-SISTPSY-VPQPGQLGF 263

Query: 434 HHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 613
           H RTE NK++ KIG                  +I P GG  +YG+VK  YL+I+G  +G 
Sbjct: 264 HRRTEYNKRIIKIGD--------------NVNEINPAGGIVNYGLVKNTYLVIEGSVLGS 309

Query: 614 KKRVVTLR 637
           +KR + LR
Sbjct: 310 RKRPLFLR 317

---

>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score =  127 bits (320), Expect = 2e-29
 Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           +R + +T  + + G+ +K   +ME  I+   +  K +Y  +     V +  VF+   ++D
Sbjct: 141 IRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYAKSILGNLVNVTDVFKNGTVVD 200

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSYTVARAGQNGYHH 439
              +T GKG +G V RWG+     K  R   LR++  +G+++P+RVS+ V + GQ GYH 
Sbjct: 201 TAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRVSWRVPQMGQMGYHQ 260

Query: 440 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 619
           RTE NK++ KIG  G+E              +TP GGF +YG+V+ DY++IKG   GP K
Sbjct: 261 RTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYVLIKGSVPGPSK 306

Query: 620 RVVTLRQSL 646
           R++ LR  +
Sbjct: 307 RLIRLRDPI 315

---

>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score =  126 bits (317), Expect = 5e-29
 Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 4/191 (2%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEK--EVPIDAVFQKDEM 259
           +R+I HT    +  + +KK  +ME ++ GG+++D++D+  +  E   E  ++ +F+  E 
Sbjct: 140 LRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEY 199

Query: 260 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVARAGQNGY 433
            D+ GVTKGKG +G V RWGV +   K  R    R++  +G W+P+RV  TV + GQ GY
Sbjct: 200 ADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGY 259

Query: 434 HHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 613
           H RTE+NK++  IG+  + T D               GGF +YG V   Y ++KG   GP
Sbjct: 260 HQRTELNKRLIDIGEGDEPTVD---------------GGFVNYGEVDGPYTLVKGSVPGP 304

Query: 614 KKRVVTLRQSL 646
            KR+V  R ++
Sbjct: 305 DKRLVRFRPAV 315

---

>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score =  125 bits (313), Expect = 2e-28
 Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEV--PIDAVFQKDEM 259
           +RVI HT      G+ +K   +ME ++ GGT+AD++++  +  E         VF+  E 
Sbjct: 137 IRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEF 196

Query: 260 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVARAGQNGY 433
            D  G+TKGKG +G V RWGV +   K  R    R++  +G W+P+RV  TV + GQ GY
Sbjct: 197 TDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGY 256

Query: 434 HHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 613
           H RTE+NK++  I   G E               TP GGFP+YG V   Y ++KG   GP
Sbjct: 257 HQRTELNKRLIDIND-GDEP--------------TPDGGFPNYGEVDGPYTLVKGSVPGP 301

Query: 614 KKRVVTLRQSL 646
           ++R+V  R ++
Sbjct: 302 EQRLVRFRPAV 312

---

>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P|
          Length = 331

 Score =  124 bits (312), Expect = 2e-28
 Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 1/203 (0%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGG-TIADKVDYGYNFFEKEVPIDAVFQKDEMI 262
           VR+I  T+ + + G+  KK  + E++I GG ++ ++++Y  N   K++      +  + +
Sbjct: 133 VRIIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERLEYAKNHLGKQITFTDFSKPGKFV 192

Query: 263 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 442
           D++ +TKGKG+ G V R+GV  LPRK  +  R +  +G WHP  V  TV +AGQ G+  R
Sbjct: 193 DVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQR 252

Query: 443 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 622
           T  N +V K G           E D     I   GGF HYG VK DY+++ G   G  KR
Sbjct: 253 TISNVRVIKYGN--------KEEVD----SINVRGGFLHYGFVKNDYVLLFGSIPGASKR 300

Query: 623 VVTLRQSLLKQTSRLALEEIKLK 691
           ++ +R    ++     +EE+KL+
Sbjct: 301 LIKMRDPARQKVP--DIEEVKLE 321

---

>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score =  124 bits (310), Expect = 4e-28
 Identities = 70/203 (34%), Positives = 112/203 (55%)
 Frame = +2

Query: 77  ATVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDE 256
           A  V++I  TQ  K+K   +K   + +I I G  +  K++Y  +   KE+ I+ VF++ +
Sbjct: 130 ADEVKIIVSTQPWKIK--LKKTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQ 187

Query: 257 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYH 436
            +D+I VTKGKG++GV+ R+ V R   K+ +G+RKV  IG+  P R+  TV   GQ GYH
Sbjct: 188 YVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYH 247

Query: 437 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 616
            RTE NK + KIG                 + +   GG+  YG V    +++KG   GP+
Sbjct: 248 RRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGPTILLKGSVPGPR 290

Query: 617 KRVVTLRQSLLKQTSRLALEEIK 685
           KR++ LR+++     +  +E I+
Sbjct: 291 KRLIILREAIRPPRKQEKVEGIE 313

---

>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P|
          Length = 331

 Score =  123 bits (308), Expect = 6e-28
 Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGG-TIADKVDYGYNFFEKEVPIDAVFQKDEMI 262
           VR+I  T+ + + G+  KK  + E++I GG ++ ++ +Y      K +  +   +  + +
Sbjct: 133 VRLIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFV 192

Query: 263 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 442
           D++ VTKGKG+ G V R+GV  LPRK  +  R +  +G WHP  V  TV +AGQ GY  R
Sbjct: 193 DVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQR 252

Query: 443 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 622
           T  N +V K  K      DA T        I   GGF HYG+VK DY+++ G   GP KR
Sbjct: 253 TISNVRVLKYSK----GEDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGPAKR 300

Query: 623 VVTLR 637
           ++ +R
Sbjct: 301 LIKMR 305

---

>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score =  120 bits (300), Expect = 5e-27
 Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
 Frame = +2

Query: 86  VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKV-DYGYNFFEKEVPIDAVFQKDEMI 262
           VR+IA +Q +   GL +KK  L+EI++ G +   K+ DY  +     + ++ VF++ +++
Sbjct: 144 VRLIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLV 203

Query: 263 DIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYH 436
           D+I VTKGKG++GV+ RWGV  LPR  K  +G R++      H     +   +AGQ G+H
Sbjct: 204 DVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARS--HGRSTFWETPQAGQTGFH 261

Query: 437 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 616
            RTE NK++  I   G +              +TP GGF  YGVV++ ++M+ G   G  
Sbjct: 262 RRTEYNKRILMIDDDGYK--------------VTPAGGFLRYGVVRSTFVMLSGSIPGTP 307

Query: 617 KRVVTLRQSL 646
           KR + +R ++
Sbjct: 308 KRPIVMRWAI 317

---

>RL3_CLOTE (Q890N9) 50S ribosomal protein L3|
          Length = 209

 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWH 385
           +E+ +D +F+  E ID+ G +KGKGY+G++ RW   R P     K HR +  +    A +
Sbjct: 95  QEIKVD-IFEAGEKIDVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMG--AASY 151

Query: 386 PARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYG 565
           PAR       AG  G    T +N +V K                                
Sbjct: 152 PARTFKNKRMAGHMGNVKSTVLNLEVVKT------------------------------- 180

Query: 566 VVKADYLMIKGCCVGPKKRVVTLRQSL 646
           + + + ++IKG   GP K  V +R S+
Sbjct: 181 IPEKNLILIKGGIPGPNKGYVIIRNSI 207

---

>RL3_ENTFA (Q839G4) 50S ribosomal protein L3|
          Length = 209

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
 Frame = +2

Query: 191 VDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVA 367
           V+ G     KE+ +D VFQ  +++D+ G TKGKG++G + R G +R P     R  R+  
Sbjct: 86  VELGEYEVGKEIKVD-VFQAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPG 144

Query: 368 CIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMG 547
            +G   P RV      AG+ G    T  N +V K+                         
Sbjct: 145 SMGPVAPNRVFKNKRLAGRMGGDRVTIQNLEVVKVD------------------------ 180

Query: 548 GFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSL 646
                  V+ + ++IKG   G KK ++T++ ++
Sbjct: 181 -------VERNVILIKGNIPGAKKSLITIKSAV 206

---

>RL3_CLOAB (Q97EH8) 50S ribosomal protein L3|
          Length = 209

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 406
           +F   E +D+ GV+KGKG++G + RWG  R P     K HR +  +   G+  P+R   +
Sbjct: 101 IFAAGEKVDVSGVSKGKGFQGTIRRWGAHRGPMSHGSKFHRAVGSMG--GSSDPSRTFKS 158

Query: 407 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 586
               G  G+ + T +N +V K+                               + + + +
Sbjct: 159 KKMPGHMGHVNTTVLNVEVAKV-------------------------------IPEKNLI 187

Query: 587 MIKGCCVGPKKRVVTLRQSL 646
           +IKG   GP K  V ++ S+
Sbjct: 188 LIKGGVPGPNKSFVVIKNSV 207

---

>RL3_PORGI (Q7MTL3) 50S ribosomal protein L3|
          Length = 205

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYTV 409
           F   + +D++G +KGKG++GVV R G   + + T   H  LR    +GA  +PA+V    
Sbjct: 100 FSDADFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGT 159

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AGQ G    T  N +V K+
Sbjct: 160 RMAGQMGNERVTVQNLEVIKV 180

---

>RL3_BACST (P28600) 50S ribosomal protein L3|
          Length = 213

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPAR 394
           +EV +D +F + +++D+ G++KGKG++G + R G +R P     R  R+   +GA  P R
Sbjct: 95  QEVKVD-IFSEGDIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGAIAPNR 153

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKI 472
           V  T    G+ G    T  N K+ K+
Sbjct: 154 VFKTKNLPGRMGGERVTIQNLKIVKV 179

---

>RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor|
          Length = 302

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
 Frame = +2

Query: 101 HTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVT 280
           H  ++ MK LK+ K            IAD  ++      +++  + +F+  +++D+ G +
Sbjct: 159 HGNVKAMKHLKEFK------------IADVSEFTPG---QQLKAEELFEVGDLVDVSGTS 203

Query: 281 KGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRT 445
            GKG++G + RWG+ R P     K+HR    + C     P+RV   +  AG+ G   +T
Sbjct: 204 SGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSAT--PSRVYKGLKMAGRMGNERKT 260

---

>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 388
           E+ +D  F+  + +D+ GV+KGKG++G + RW  +R P     K HR    +    A  P
Sbjct: 96  EIKVDT-FEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMG--AASDP 152

Query: 389 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 568
           +R        G  G  + T +N +V KI                 EK+I           
Sbjct: 153 SRTFKNKRMPGHMGAKNTTVLNLEVVKI---------------MPEKNI----------- 186

Query: 569 VKADYLMIKGCCVGPKKRVVTLRQSL 646
                ++IKG   GP K  V +R S+
Sbjct: 187 -----ILIKGGIPGPNKGTVVIRNSV 207

---

>RL3_BACTN (Q8A476) 50S ribosomal protein L3|
          Length = 205

 Score = 46.6 bits (109), Expect = 7e-05
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYT 406
           +F     +D++G +KGKG++GVV R G   + + T   H   RK   IGA  +PA+V   
Sbjct: 99  MFNDATFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
           +   GQ G    T  N +V K+
Sbjct: 159 MRMGGQLGGDRVTVQNLQVLKV 180

---

>RL3_BIFLO (Q8G417) 50S ribosomal protein L3|
          Length = 213

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = +2

Query: 140 KAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 319
           + HL+E++ +     D+ + G     +E+  D +F++   +D+ G TKGKG+ G + RWG
Sbjct: 79  RRHLVEVRTDD---VDQFEAG-----QELAAD-LFEEGAEVDVTGTTKGKGFAGTIKRWG 129

Query: 320 VT--RLPRKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKV 463
               R    +H+  R+   +GA   P+R+      AG+ G+   T  N  V
Sbjct: 130 FKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTV 180

---

>RL3_BACCR (Q81J42) 50S ribosomal protein L3|
          Length = 210

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 394
           +EV +D VF   E++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKI 472
           V      AG+ G    T  N ++ ++
Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179

---

>RL3_BACAN (Q81VT0) 50S ribosomal protein L3|
          Length = 210

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 394
           +EV +D VF   E++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKI 472
           V      AG+ G    T  N ++ ++
Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179

---

>RL3_LISMO (Q8Y440) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 397
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKI 472
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_LISMF (Q71WE6) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 397
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKI 472
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_LISIN (Q927K7) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 397
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKI 472
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3|
          Length = 244

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 376
           +E+ +  VF+  +++D+ G++KG+G+ GV+ RW     PR   HR  R V  IG
Sbjct: 96  QELRVQDVFKPGDLVDVWGISKGRGFAGVMKRWDFAGFPRSHGHRYHRAVGAIG 149

---

>RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3|
          Length = 209

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
 Frame = +2

Query: 131 KQKKAHLMEIQINGGTIADKVDYGYNFFEKE----VPIDAVFQKDEMIDIIGVTKGKGYE 298
           K    H  +   N G I  +V       E E    VP+D VF++ + ++++GVTKGKG+ 
Sbjct: 62  KPLAGHYKKAGKNPGYILSEVSKSLIVGELEAGATVPVD-VFKEGDKVNVLGVTKGKGFA 120

Query: 299 GVVTR---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYK 469
           GVV R    G +R   ++ R     +  G+  P+R       AG+ G  ++T  N  + K
Sbjct: 121 GVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGKNKTVQNLVIVK 180

Query: 470 I 472
           +
Sbjct: 181 V 181

---

>RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)|
          Length = 209

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 394
           +EV ++ +F   E++D+ GV+KGKG++G + R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVE-IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNR 153

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKI 472
           V       G+ G    T  N ++ K+
Sbjct: 154 VFKGKLLPGRMGGEQITVQNLEIVKV 179

---

>RL3_STRP6 (Q5XED5) 50S ribosomal protein L3|
          Length = 208

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 419 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 598
           G+ G +  T  N ++ ++                               +++ + +++KG
Sbjct: 160 GRMGGNRVTVQNLEIVQV-------------------------------ILEKNVILVKG 188

Query: 599 CCVGPKKRVVTLRQSL 646
              G KK ++T++ ++
Sbjct: 189 NVPGAKKSLITIKSAV 204

---

>RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3|
          Length = 208

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F+  +++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 419 GQNGYHHRTEMNKKVYKI 472
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_TROWT (Q83FY6) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 409
           +FQ+ +++D++G +KGKG+ G + R           +HR  RK   +GA   P+RV    
Sbjct: 96  IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG+ G    T  N ++ KI
Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176

---

>RL3_TROW8 (Q83I78) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 409
           +FQ+ +++D++G +KGKG+ G + R           +HR  RK   +GA   P+RV    
Sbjct: 96  IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG+ G    T  N ++ KI
Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176

---

>RL3_THETN (Q8R7V4) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA-WH 385
           E+ +D +F+  + +D+ G++KGKG+ GV+ R+G  R P     K H   R+V  +GA   
Sbjct: 96  EIKVD-IFKPGDRVDVTGISKGKGFAGVIKRYGARRGPMSHGSKYH---RRVGSMGATTD 151

Query: 386 PARVSYTVARAGQNGYHHRTEMNKKVYKI 472
           P R        G+ G    T  N +V K+
Sbjct: 152 PGRTFKGKKMPGRMGSDRVTIQNLEVVKV 180

---

>RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3|
          Length = 209

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = +2

Query: 206 NFFE--KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 373
           N FE  +E+ +D +F+  E ID+ G +KGKG++GV+ R G  R P  TH     R    +
Sbjct: 89  NSFEVGQEIKVD-IFESGEKIDVTGTSKGKGFQGVIKRHGQQRGP-TTHGSHFHRAPGAM 146

Query: 374 GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 472
           G   P RV       G  G    T  N +V  +
Sbjct: 147 GVIDPMRVFKGKKLPGHMGSEQVTIQNLEVVSV 179

---

>RL3_THEMA (P38515) 50S ribosomal protein L3|
          Length = 207

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR----KTHRGLRKVACIGAWHPARVSYT 406
           VF+K E +D+ G TKG+G+ G + RWG +  P+    K HR L  V       PA++   
Sbjct: 97  VFEKGEYVDVTGWTKGRGFAGAMKRWGFSGGPKSHGSKFHRELGSVG--QHTEPAKIWKG 154

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
               G+ G    T  N +V  I
Sbjct: 155 KKMPGRYGNERVTVRNLQVVDI 176

---

>RL3_SPIKU (P60457) 50S ribosomal protein L3|
          Length = 258

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWHPARVSYTVAR 415
           +F   E +D+ G +KGKG+ G + R   +R P     G  R V  +GA  P R+  +   
Sbjct: 98  IFTAGEFVDVTGTSKGKGFTGSIKRHNYSRGPMGHGSGYHRGVGSMGAIAPNRILKSKKM 157

Query: 416 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 595
            G  G    T  N ++  I                TEK+                 L++K
Sbjct: 158 PGHIGTEKVTIQNLEIIAID---------------TEKNA----------------LLVK 186

Query: 596 GCCVGPKKRVVTLRQSL 646
           G   GPKK+ V +++++
Sbjct: 187 GSIPGPKKQFVVIKEAI 203

---

>RK3_GUITH (O46894) Chloroplast 50S ribosomal protein L3|
          Length = 204

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
 Frame = +2

Query: 95  IAHTQIRKMKGLKQKKAHLMEIQINGG---TIADKVDYGYNFFEKEVPIDAVFQKDEMID 265
           + H Q+  +  LK    HL E +++     TIA ++D             ++F+  +++ 
Sbjct: 66  LGHLQVNNLPPLK----HLKEYKVDATHTFTIAQQLDV------------SIFELGQIVS 109

Query: 266 IIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIGAWH-PARVSYTVARAGQNGYH 436
           + GV+ GKG+ G V R   TR P  TH  +  R+   IG    PA+V      AG+ G H
Sbjct: 110 VSGVSIGKGFAGTVKRHNFTRGP-MTHGSKNHREPGSIGQGSTPAKVHKGKKMAGRLGGH 168

Query: 437 HRTEMNKKVYKIGK 478
             T  N  V  + K
Sbjct: 169 QVTTKNLTVVHLDK 182

---

>RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = +2

Query: 236 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 400
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAISTGDVARVW 252

Query: 401 YTVARAGQNGYHHRTEMNKKVYKI 472
                 GQ G   RT    KV++I
Sbjct: 253 PGTKMPGQLGNVDRTAFGLKVWRI 276

---

>RL3_STRP8 (P60452) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 419 GQNGYHHRTEMNKKVYKI 472
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRP3 (P60451) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 419 GQNGYHHRTEMNKKVYKI 472
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 419 GQNGYHHRTEMNKKVYKI 472
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 419 GQNGYHHRTEMNKKVYKI 472
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3|
          Length = 266

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 40/152 (26%), Positives = 65/152 (42%)
 Frame = +2

Query: 236 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVAR 415
           ++F   E +D+ G++KGKG+ G + R    ++  K+H G       G   P R       
Sbjct: 97  SIFTPGEFVDVTGISKGKGFAGTIKRHN-QKIGPKSHGG------GGGSKPVR------- 142

Query: 416 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 595
             Q G       NK V  +   G   H+  T     E  +T          VK + L++K
Sbjct: 143 --QTGSLGDISGNKVVKGMTMPGHLGHEQVT-IQNLEVIMTD---------VKNNILLVK 190

Query: 596 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 691
           G   GPKK  V +++   K  S+ A++ + L+
Sbjct: 191 GAVPGPKKGFVVIKECAKKIPSKEAVKLVDLE 222

---

>RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3|
          Length = 209

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 394
           +E+ +DA F + +++D+ G +KGKG+ G + R    R P     R  R+   +G   P R
Sbjct: 95  QEIKVDA-FAEGDIVDVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMGPVDPNR 153

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 574
           V    A  G+ G    T  N ++ K+                                 +
Sbjct: 154 VFKGKALPGRMGGEQVTVQNLEIIKVD-------------------------------AE 182

Query: 575 ADYLMIKGCCVGPKKRVVTLRQSL 646
            + L++KG   G KK  VT+R ++
Sbjct: 183 RNLLLVKGNVPGAKKSYVTVRSAI 206

---

>RL3_AQUAE (O66431) 50S ribosomal protein L3|
          Length = 241

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 376
           +++ ++ VF+  +++D+ G++KG+G+ G + RW     P+   HR  R V  IG
Sbjct: 96  QQLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIG 149

---

>RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +2

Query: 236 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 400
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   +      RV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRVW 252

Query: 401 YTVARAGQNGYHHRTEMNKKVYKI 472
                 G+ G  +RTE   KV++I
Sbjct: 253 PGTKMPGKMGNIYRTEYGLKVWRI 276

---

>RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +2

Query: 236 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 400
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252

Query: 401 YTVARAGQNGYHHRTEMNKKVYKI 472
                 G+ G  +RT    KV+++
Sbjct: 253 PGTKMPGRMGNQNRTVYGLKVWRV 276

---

>RL3_STRMU (Q8DS16) 50S ribosomal protein L3|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F+  +++D+ G TKGKG++G + R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 419 GQNGYHHRTEMNKKVYKI 472
           G+ G +  T  N +V ++
Sbjct: 160 GRMGGNRVTVQNLEVVQV 177

---

>RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 347

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +2

Query: 236 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 400
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252

Query: 401 YTVARAGQNGYHHRTEMNKKVYKI 472
                 G+ G  +RT    KV+++
Sbjct: 253 PGTKMPGKMGNQNRTVYGLKVWRV 276

---

>RL3_STAAC (Q5HDV8) 50S ribosomal protein L3|
          Length = 209

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 92  QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 129

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 130 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 173

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 174 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 206

---

>RL3_CORDI (P60453) 50S ribosomal protein L3|
          Length = 218

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 409
           +F+    +D+ G TKGKGY G + R G              R+V  IGA   P RV    
Sbjct: 105 IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGT 164

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGSDRVTTQNLKVQKI 185

---

>RL3_STAAW (P60450) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAS (Q6G771) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAR (Q6GEI3) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAN (P60449) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_STAAM (P60448) 50S ribosomal protein L3|
          Length = 220

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK +V +R S+ K
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217

---

>RL3_LEPIN (Q9XD36) 50S ribosomal protein L3|
          Length = 206

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
 Frame = +2

Query: 95  IAHTQIRKMKGLKQKKAHLMEIQINGGTIADKV-DYGYNFFEKEV-PIDAVFQKDEMIDI 268
           +A   I++++  K +K HL +  +    +  +   +G +     V  I  VF   +++ +
Sbjct: 51  LAFQDIKEIQTSKAEKNHLAKAGLGPKKVLKEFRSFGDSPTAGSVLKIQDVFAVSDVVKV 110

Query: 269 IGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSYTVARAGQNGYHHR 442
            GV+KG+GY+GVV R G    P     R  R    +GA   P+RV   V   G+ G    
Sbjct: 111 TGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKT 170

Query: 443 TEMNKKVYKIGK 478
           T  N KV +I +
Sbjct: 171 TVRNLKVVRINE 182

---

>RL3_LEPIC (Q72NG1) 50S ribosomal protein L3|
          Length = 206

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
 Frame = +2

Query: 95  IAHTQIRKMKGLKQKKAHLMEIQINGGTIADKV-DYGYNFFEKEV-PIDAVFQKDEMIDI 268
           +A   I++++  K +K HL +  +    +  +   +G +     V  I  VF   +++ +
Sbjct: 51  LAFQDIKEIQTSKAEKNHLAKAGLGPKKVLKEFRSFGDSPTAGSVLKIQDVFAVSDVVKV 110

Query: 269 IGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSYTVARAGQNGYHHR 442
            GV+KG+GY+GVV R G    P     R  R    +GA   P+RV   V   G+ G    
Sbjct: 111 TGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKT 170

Query: 443 TEMNKKVYKIGK 478
           T  N KV +I +
Sbjct: 171 TVRNLKVVRINE 182

---

>RL3_MYCCT (P10134) 50S ribosomal protein L3|
          Length = 223

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 4/155 (2%)
 Frame = +2

Query: 224 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPA 391
           + +  +F   E +D+ G++KGKG+ G + R   +R P       HRG+  +  I      
Sbjct: 94  INVSDIFVSGEYVDVTGISKGKGFAGGIKRHNYSRGPMAHGSGYHRGIGSMGAI----IN 149

Query: 392 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 571
           R+  +    G  G   RT  N ++  I +                               
Sbjct: 150 RIFKSKKMPGHMGNAKRTIQNLEIIAIDQ------------------------------- 178

Query: 572 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 676
             + ++IKG   GPK   V ++Q++   +S+ A+E
Sbjct: 179 SNNIMLIKGSIPGPKNSFVQIKQNVKGMSSKQAVE 213

---

>RL3_GEOSL (P60454) 50S ribosomal protein L3|
          Length = 210

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
 Frame = +2

Query: 143 AHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 322
           AH+ E ++      D VD  YN  +  +  DA F+  E ID+ G + GKG++GV+ RWG 
Sbjct: 78  AHIREFRL------DDVDR-YNVGDV-ISADA-FEVGEYIDVTGTSIGKGFQGVIKRWGF 128

Query: 323 TRLPRKTHRGL--RKVACIG-AWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 472
            R  R +H     R    IG + +P+RV       GQ G    T    +V ++
Sbjct: 129 -RGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNERVTVQRLQVVRV 180

---

>RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3|
          Length = 208

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F   +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 419 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 598
           G+ G    T  N +V ++                               V + + ++IKG
Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188

Query: 599 CCVGPKKRVVTLRQSL 646
              G KK ++T++ ++
Sbjct: 189 NVPGAKKSLITIKSAV 204

---

>RL3_STRPN (Q97SV5) 50S ribosomal protein L3|
          Length = 208

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 418
           F   +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 419 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 598
           G+ G    T  N +V ++                               V + + ++IKG
Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188

Query: 599 CCVGPKKRVVTLRQSL 646
              G KK ++T++ ++
Sbjct: 189 NVPGAKKSLITIKSAV 204

---

>RL3_THETH (P52860) 50S ribosomal protein L3|
          Length = 206

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 409
           +F+  E +D+ G +KG+G+ GV+ RW     P     H+  R    IG    P RV    
Sbjct: 95  IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG  G    T MN +V  +
Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175

---

>RL3_THET8 (Q5SHN8) 50S ribosomal protein L3|
          Length = 206

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 409
           +F+  E +D+ G +KG+G+ GV+ RW     P     H+  R    IG    P RV    
Sbjct: 95  IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG  G    T MN +V  +
Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175

---

>RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast precursor|
          Length = 324

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-----THRGLRKVACIGAWHPARVSYT 406
           F   + +D+ G+T+GKG++G + R G + +P       +HR         A  P +V   
Sbjct: 176 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDA--PGKVFKG 233

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AG+ G   RT  N  VYKI
Sbjct: 234 RKMAGRMGADQRTVKNVWVYKI 255

---

>RL3_CORGL (Q8NT09) 50S ribosomal protein L3|
          Length = 218

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F   + +D+ G TKGKGY G + R G              R+V  IG A  P R+    
Sbjct: 105 IFNDIKFVDVTGTTKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185

---

>RL3_STAES (Q8CRG0) 50S ribosomal protein L3|
          Length = 220

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F+  ++ID+ GV+KGKG++G + R G  R P                     
Sbjct: 103 QEVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP--------------------- 140

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MAHGSHFHRAP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK +V +  S+ K
Sbjct: 185 VVQVDTENSVILVKGNVPGPKKGLVEITTSIKK 217

---

>RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3|
          Length = 220

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F+  ++ID+ GV+KGKG++G + R G  R P                     
Sbjct: 103 QEVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP--------------------- 140

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MAHGSHFHRAP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK +V +  S+ K
Sbjct: 185 VVQVDTENSVILVKGNVPGPKKGLVEITTSIKK 217

---

>RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3|
          Length = 310

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 46/210 (21%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
 Frame = +2

Query: 68  KKYATVVRVIAHTQIRKMKGLKQKKAHLMEIQING--GTIADKVDYGYNFFEKEVPIDAV 241
           +K   V   +   QI + K  K +K +  +I+ +    T   +   GYN  +K + +D +
Sbjct: 41  EKNGYVATKVGFQQIEEKKLNKPQKGYFKKIKTDAFKHTKEFRNVSGYNVGDK-ILVD-I 98

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 421
           F   + +D   +TKGKG+ G + RW              KV  +G  H A          
Sbjct: 99  FNSGDKVDAQAITKGKGFTGAIKRWNF------------KVGPLG--HGA---------- 134

Query: 422 QNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV-VKADYLMIKG 598
             GY HR + +    + G  GQ              ++  +       + ++ + +++KG
Sbjct: 135 --GYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVSIELEKNLILVKG 192

Query: 599 CCVGPKKRVVTLRQSLLKQTSRLALEEIKL 688
              GP   +V L+ ++    S+  ++ IKL
Sbjct: 193 SVPGPVNSLVLLKTTV---KSKKQVDPIKL 219

---

>RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3|
          Length = 211

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHR-----GLRKVACIGAWHP 388
           +F + E ID  G +KGKG +GV+ RW     P     +K HR     G RK        P
Sbjct: 95  IFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKT-------P 147

Query: 389 ARVSYTVARAGQNGYHHRTEMNKKVYKI 472
            RV      AG  G    T  N +V +I
Sbjct: 148 GRVYKGKRMAGHMGMERVTVQNLEVVEI 175

---

>RL3_NEIMB (P60444) 50S ribosomal protein L3|
          Length = 214

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = +2

Query: 236 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 406
           ++F+  +++D+ G +KGKG+ G + R  +G  R      R  R    IG A  P RV   
Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AGQ G    T    +V ++
Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183

---

>RL3_NEIMA (P60443) 50S ribosomal protein L3|
          Length = 214

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = +2

Query: 236 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 406
           ++F+  +++D+ G +KGKG+ G + R  +G  R      R  R    IG A  P RV   
Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AGQ G    T    +V ++
Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183

---

>RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precursor (Fragment)|
          Length = 259

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
 Frame = +2

Query: 146 HLMEIQ---INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 316
           HL E +   I+G  +  K+D+G            +F++ +++D+ G T GKG++G + R 
Sbjct: 121 HLQEFRLQSIDGFEVTQKLDFG-----------ELFKEGDLVDVSGTTIGKGFQGGIKRH 169

Query: 317 GVTRLPRKTH--RGLRKVACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 472
              R  + TH  +  R++  IGA   P RV       G+ G   R     K+ KI
Sbjct: 170 NFKR-GQMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 223

---

>RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3|
          Length = 220

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 8/153 (5%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 397
           +EV +D  F+  ++ID+ G +KGKG++G + R G  R P                     
Sbjct: 103 QEVTVDT-FEAGDIIDVTGTSKGKGFQGAIKRHGQARGP--------------------- 140

Query: 398 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 565
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MAHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 566 VVKAD----YLMIKGCCVGPKKRVVTLRQSLLK 652
           VV+ D     +++KG   GPKK  V ++ S+ K
Sbjct: 185 VVQVDTENNVILVKGNVPGPKKGFVEIQTSIKK 217

---

>RL3_VIBPA (Q87T13) 50S ribosomal protein L3|
          Length = 209

 Score = 37.7 bits (86), Expect = 0.033
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 406
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNETKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_COREF (Q8FS80) 50S ribosomal protein L3|
          Length = 218

 Score = 37.7 bits (86), Expect = 0.033
 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F   + +D+ G +KGKGY G + R G              R+V  IG A  P R+    
Sbjct: 105 IFNDVKFVDVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185

---

>RL3_WIGBR (Q8D212) 50S ribosomal protein L3|
          Length = 215

 Score = 37.7 bits (86), Expect = 0.033
 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
 Frame = +2

Query: 155 EIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 334
           ++++  G    KVD    F+  +V     F     ++I G++KGKG+ G + RW      
Sbjct: 72  KVELGRGLWEFKVDKNSKFYVGQVLSINTFININKVNITGISKGKGFSGTMKRWNFHGQD 131

Query: 335 RKTHRGL--RKVACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 472
                 L  R    IG    P +V      +G  GY+  T  N  V KI
Sbjct: 132 ASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKI 180

---

>RL3_BUCBP (Q89A68) 50S ribosomal protein L3|
          Length = 214

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTV 409
           +F   + +DIIG +KGKG+ G V RW            L  R    IG    P RV    
Sbjct: 102 LFSNIKKVDIIGTSKGKGFCGTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGK 161

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG  G H  T  N  + KI
Sbjct: 162 KMAGHLGNHRVTVQNLDIVKI 182

---

>RL3_BORPE (Q7VTD3) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = +2

Query: 224 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 394
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKI 472
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_BORPA (Q7W2F6) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = +2

Query: 224 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 394
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKI 472
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_BORBR (Q7WRC5) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = +2

Query: 224 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 394
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKI 472
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_MYCTU (P60442) 50S ribosomal protein L3|
          Length = 217

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = +2

Query: 140 KAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTR-- 313
           + +L E++++    A +   G     +      +F     +D+ G +KGKG+ G + R  
Sbjct: 78  RRYLAELRLDDSDAATEYQVGQELTAE------IFADGSYVDVTGTSKGKGFAGTMKRHG 131

Query: 314 ---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 472
               G +   +  HR  R  +  G   PARV      AG+ G    T +N  V+K+
Sbjct: 132 FRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHKV 185

---

>RL3_MYCBO (P60441) 50S ribosomal protein L3|
          Length = 217

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = +2

Query: 140 KAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTR-- 313
           + +L E++++    A +   G     +      +F     +D+ G +KGKG+ G + R  
Sbjct: 78  RRYLAELRLDDSDAATEYQVGQELTAE------IFADGSYVDVTGTSKGKGFAGTMKRHG 131

Query: 314 ---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 472
               G +   +  HR  R  +  G   PARV      AG+ G    T +N  V+K+
Sbjct: 132 FRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHKV 185

---

>RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 406
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_VIBVU (Q8DE39) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 406
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 406
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_BUCAP (Q8K950) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 406
           +F   + +D+ G++KGKG+ G V RW   R    TH      R    IG    P RV   
Sbjct: 100 IFNDIKKVDVTGISKGKGFSGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGRVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AG  G +  T  N  + KI
Sbjct: 159 KKMAGHLGNNRVTVQNLNIVKI 180

---

>RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3|
          Length = 403

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +2

Query: 227 PIDAV-FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVS 400
           P+DA  F   + +   G T   G++G + RWG+   P R+T +  R++  +G+   AR+ 
Sbjct: 212 PLDARHFGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIW 271

Query: 401 YTVARAGQNGYHHRTEMNKKVYKI 472
                 G  GY  RT    ++ +I
Sbjct: 272 PGKRMPGHMGYEWRTVSGLEIVRI 295

---

>RL3_CHLCV (Q824Q1) 50S ribosomal protein L3|
          Length = 221

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 412
           V +    +DI GV+KGKG++GV+ R+G    P+    G  R    IG    P R      
Sbjct: 111 VLEDISSVDISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 413 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 592
           R    G  + T  N +V KI                 EK +                L++
Sbjct: 171 RPSHMGTVNVTVKNLEVVKID---------------LEKKV----------------LLV 199

Query: 593 KGCCVGPKKRVVTLRQS 643
           KG   GP+  VV +R+S
Sbjct: 200 KGAIPGPRGSVVVIRRS 216

---

>RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast precursor|
          Length = 271

 Score = 36.6 bits (83), Expect = 0.074
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
 Frame = +2

Query: 95  IAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNF-----FE--KEVPIDAVFQKD 253
           I + ++R  K  K +  HL +     GTI  +    +       FE  +++  D +F++ 
Sbjct: 105 IGYRRVRDKKLTKPETGHLQK----AGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEG 160

Query: 254 EMIDIIGVTKGKGYEGVVTRW----GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 421
           +++D+ G T GKG++G + R     G      K+HR L  +       P RV       G
Sbjct: 161 DLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIG--AGTTPGRVYKGKKMPG 218

Query: 422 QNGYHHRTEMNK-KVYKIGK 478
           + G   RT++ K K+ K+ K
Sbjct: 219 RMG-GTRTKIRKLKIVKVDK 237

---

>RL3_TREPA (O83219) 50S ribosomal protein L3|
          Length = 208

 Score = 36.6 bits (83), Expect = 0.074
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIG-AWHPARVSYTV 409
           V +    +D+  ++KGKG++GVV RWG +   R +H  +  R+    G    P R    V
Sbjct: 98  VLESVRYLDVCALSKGKGFQGVVKRWGFSG-GRSSHGSKFHREAGSTGQCTSPGRTFKNV 156

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
              G+ G    T  N ++ +I
Sbjct: 157 KMPGRMGAERVTVQNLRIERI 177

---

>RL3_MYCGA (O52332) 50S ribosomal protein L3|
          Length = 236

 Score = 36.6 bits (83), Expect = 0.074
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = +2

Query: 230 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 409
           ++ +FQ+ +++D+   TKG+G+ G + RW   ++  K H         GA +P R   +V
Sbjct: 96  VEELFQEGQVVDVQARTKGRGFTGAIKRWNF-KIGSKGH---------GAGYPHRFQGSV 145

Query: 410 ARAGQNGYHHRTEMNKK 460
            +AG+ G   +  M  K
Sbjct: 146 -QAGRGGSQAQRVMKGK 161

---

>RL3_BORBU (P94267) 50S ribosomal protein L3|
          Length = 206

 Score = 36.6 bits (83), Expect = 0.074
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
 Frame = +2

Query: 122 KGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEG 301
           K +K +   L +I+     I  K   GY+  + E+ +D VF+  + +D+ G TKGKG++G
Sbjct: 62  KPIKGQYKSLKDIEPKRYVIELKGLDGYDAGD-EIKVD-VFKSVKYVDVTGTTKGKGFQG 119

Query: 302 VVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYK 469
            + R   +  P     K HR L       A  PAR       AG+   + +T  N +V  
Sbjct: 120 AMKRHNFSGGPSSHGSKFHRHLGGTG--QATTPARTFKGTKMAGRMAGNQQTIQNLEVVL 177

Query: 470 I 472
           I
Sbjct: 178 I 178

---

>RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3|
          Length = 219

 Score = 36.2 bits (82), Expect = 0.097
 Identities = 33/122 (27%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
 Frame = +2

Query: 131 KQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEM-----IDIIGVTKGKGY 295
           K K  HL ++ IN G      ++  N   + + +  +F    +     +D+ G++KGKG+
Sbjct: 62  KPKLGHLKKLGINYGK--GLWEFRLNDSNRLISVGDIFTLKVLKCINKVDVTGISKGKGF 119

Query: 296 EGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVY 466
            G V RW            L  R    IG    P +V      AG  GY   T  N  V 
Sbjct: 120 AGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGYEKATIQNLAVI 179

Query: 467 KI 472
            I
Sbjct: 180 NI 181

---

>RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3|
          Length = 211

 Score = 36.2 bits (82), Expect = 0.097
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 316
           ++ +D +FQ  +M+D+ G +KGKG+ G + RW
Sbjct: 95  QITVD-LFQAGQMVDVTGESKGKGFAGTIKRW 125

---

>RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3|
          Length = 211

 Score = 36.2 bits (82), Expect = 0.097
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG--AWH 385
           +E+ +D V  +   +DI G +KGKG  GV+ + G +  R      R  R    IG  +W 
Sbjct: 93  QEIKVD-VLTEVGYVDITGTSKGKGTSGVMKKHGFSGNRASHGVSRNHRLGGSIGMSSW- 150

Query: 386 PARVSYTVARAGQNGYHHRTEMNKKVYKI 472
           P +V      AGQ+G    T  N KV K+
Sbjct: 151 PGKVLKGKKMAGQHGNATVTVQNLKVVKV 179

---

>RL3_LACPL (Q88XY6) 50S ribosomal protein L3|
          Length = 209

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 397
           EV  D +F   + +D+ G+TKG GY+G + + G +R P     R  R+   +GA    RV
Sbjct: 97  EVKAD-IFAAGDAVDVTGITKGHGYQGNIHKDGQSRGPMAHGSRYHRRPGSMGA-IINRV 154

Query: 398 SYTVARAGQNGYHHRTEMNKKVYK 469
                  G+ G H RT  N ++ +
Sbjct: 155 FKGKKLPGRMGNHQRTMQNLQIVR 178

---

>RL3_MYCLE (P30762) 50S ribosomal protein L3|
          Length = 217

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
 Frame = +2

Query: 140 KAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTR-- 313
           + +L E++++    A + + G      E+  DA +     +D+ G +KGKG+ G + R  
Sbjct: 78  RRYLAELRLDHPDAAAEYEVGQEL-TAEIFADATY-----VDVTGTSKGKGFSGTMKRHG 131

Query: 314 ---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 472
               G +   +  HR  R  +  G   PARV      AG+ G    T  N  V+K+
Sbjct: 132 FRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLVHKV 185

---

>RL3_COXBU (Q83ES4) 50S ribosomal protein L3|
          Length = 217

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 388
           E+ +D +F++ +++D+ G+T+GKG+ G V R    R    TH      R    IG    P
Sbjct: 98  ELKVD-IFKEGQVVDVRGLTRGKGFAGTVKRHNF-RTQDATHGNSLSHRAPGSIGQCQTP 155

Query: 389 ARVSYTVARAGQNGYHHRTEMNKKVYKI 472
            RV      AGQ G  + T  ++++ K+
Sbjct: 156 GRVWKGKKMAGQLGNVYCTVQSQEIIKV 183

---

>RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial precursor (YmL9)|
          Length = 269

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----HPARVSYTV 409
           F++ + +D+  V+KGKG+ GV+ R+G   L R +H         G++     P RV    
Sbjct: 160 FKEGQYVDVRSVSKGKGFTGVMKRYGFKGL-RASHGTSIMHRHGGSYGQNQDPGRVLPGR 218

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
              G  G  H T  N KV K+
Sbjct: 219 KMPGHMGNEHVTIQNVKVLKV 239

---

>RL3_XANCP (Q8PC49) 50S ribosomal protein L3|
          Length = 216

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 406
           +F+  + +D+ GVTKGKG++G + R+   R+   TH         G+      P RV   
Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              +G  G   ++  N +V K+
Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187

---

>RL3_XANAC (Q8PNS4) 50S ribosomal protein L3|
          Length = 216

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 406
           +F+  + +D+ GVTKGKG++G + R+   R+   TH         G+      P RV   
Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              +G  G   ++  N +V K+
Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187

---

>RL3_BRAPL (Q9FA04) 50S ribosomal protein L3|
          Length = 218

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA-CIGA-WHPA 391
           +E+ +D +FQ  + ID+  ++KG+G+ GV+ R      P       R+ A  IG   +PA
Sbjct: 94  QELKVD-IFQAGDFIDVSSLSKGRGFAGVMKRHNYDGGPMSHGSNFRRRAGSIGCNSYPA 152

Query: 392 RVSYTVARAGQNGYHHRTEMNKKVYKI 472
           RV       G  G    T  N KV +I
Sbjct: 153 RVWKGKGMPGHMGNTLTTIQNLKVVEI 179

---

>RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)|
          Length = 121

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 385
           +E+ +D +F   + +D+ G +KGKG++G V RW   R    TH        +G+      
Sbjct: 6   QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 63

Query: 386 PARVSYTVARAGQNGYHHRTEMNKKVYKI 472
           P RV      AG  G    T  + +V ++
Sbjct: 64  PGRVFKGKKMAGHLGNERVTVQSLEVVRV 92

---

>RL3_HAEIN (P44344) 50S ribosomal protein L3|
          Length = 208

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 385
           +E+ +D +F   + +D+ G +KGKG++G V RW   R    TH        +G+      
Sbjct: 93  QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150

Query: 386 PARVSYTVARAGQNGYHHRTEMNKKVYKI 472
           P RV      AG  G    T  + +V ++
Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

---

>RL3_BUCAI (P57591) 50S ribosomal protein L3|
          Length = 209

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRW 316
           +F   + +DI G++KGKG+ G V RW
Sbjct: 100 IFNNVKKVDITGISKGKGFSGTVKRW 125

---

>RL3_STRAW (Q82DP5) 50S ribosomal protein L3|
          Length = 214

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
 Frame = +2

Query: 140 KAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTR-- 313
           + HL+EI+      AD  +Y      +E+  +  F+    +D+ G +KGKG+ GV+ R  
Sbjct: 80  RRHLVEIRT-----ADASEYTLG---QEITAET-FEAGVKVDVTGKSKGKGFAGVMKRHN 130

Query: 314 ---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 472
               G     ++ HR    +   G   P RV   +  AG+ G    T  N  V+ +
Sbjct: 131 FKGLGAGHGTQRKHRSPGSIG--GCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

---

>RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3|
          Length = 219

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 334
           +EV ++  F+  ++ID+ GV+KGKG++G + R    R P
Sbjct: 103 QEVSVNT-FEAGDVIDVTGVSKGKGFQGAIKRHNQARGP 140

---

>RL3_LACLA (Q9CDW2) 50S ribosomal protein L3|
          Length = 207

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +2

Query: 221 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 334
           E+ +D  F   +++D+ G +KGKG++G + R G +R P
Sbjct: 94  EITVDT-FAAGDVVDVTGTSKGKGFQGPIKRHGQSRGP 130

---

>RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3|
          Length = 219

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 412
           VF+    +D+ G++KGKG++GV+ ++G    P     G  R    IG    P R      
Sbjct: 111 VFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 413 RAGQNGYHHRTEMNKKVYKI 472
           R    G  + T  N +V K+
Sbjct: 171 RPSHMGAENVTVKNLEVIKV 190

---

>RL3_PSESM (Q889X1) 50S ribosomal protein L3|
          Length = 211

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRW 316
           +F   +++D+ G +KGKG++G + RW
Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125

---

>RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3|
          Length = 214

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F   +++D+ G +KGKG+ GV+ R  +   R      R       IG A  P RV    
Sbjct: 103 IFTVGQLVDVTGTSKGKGFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGK 162

Query: 410 ARAGQNG 430
             AGQ G
Sbjct: 163 RMAGQYG 169

---

>RL3_PASMU (Q9CL32) 50S ribosomal protein L3|
          Length = 209

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 385
           +E+ +D +F   + +D+ G +KGKG+ G V RW   R    TH        +G+      
Sbjct: 94  QEINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 151

Query: 386 PARVSYTVARAGQNGYHHRTEMNKKVYKI 472
           P RV      AG  G    T  + +V ++
Sbjct: 152 PGRVFKGKKMAGHLGNERVTVQSLEVVRV 180

---

>RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3|
          Length = 192

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +2

Query: 278 TKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIG--AWHPARVSYTVARAGQNGYHHRTE 448
           TKG+G+ GV+ RW     P    HR  R+   IG   W P RV      AGQ G    T 
Sbjct: 100 TKGRGFTGVMKRWNFAGGPAAHGHRFKRRTGSIGNREW-PGRVQPGKKMAGQYGNEKVTV 158

Query: 449 MNKKV 463
            N+ V
Sbjct: 159 QNEIV 163

---

>RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3|
          Length = 221

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 412
           +F     +D+ G++KGKG++GV+ ++G    P+    G  R    IG    P R      
Sbjct: 111 IFDGVSNVDVCGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 413 RAGQNGYHHRTEMNKKVYKI 472
           R    G    T  N +V K+
Sbjct: 171 RPSHMGCDRVTVKNLEVVKV 190

---

>RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3|
          Length = 208

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 385
           +E+ +D +F   + +D+ G +KGKG+ G V RW   R    TH        +G+      
Sbjct: 93  QEINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150

Query: 386 PARVSYTVARAGQNGYHHRTEMNKKVYKI 472
           P RV      AG  G    T  + +V ++
Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

---

>RL3_XYLFA (Q9PE76) 50S ribosomal protein L3|
          Length = 215

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
 Frame = +2

Query: 131 KQKKAHLMEIQINGGT-----IADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGY 295
           K +  H  + ++  G        +K   G      EV + ++F   + +DI G+TKGKG+
Sbjct: 66  KPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGL-SIFAVGQKVDIQGITKGKGF 124

Query: 296 EGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNGYHHRTEMNKKV 463
           +G + R    R+   TH         G+      P RV      +G  G   ++  N +V
Sbjct: 125 QGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEV 183

Query: 464 YKI 472
            KI
Sbjct: 184 VKI 186

---

>RL3_CHLTR (O84533) 50S ribosomal protein L3|
          Length = 221

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 367
           +F     +DI G++KGKG++GV+ ++G    P+    G  + A
Sbjct: 111 IFDGVSNVDICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHA 153

---

>RL3_XYLFT (Q87E82) 50S ribosomal protein L3|
          Length = 215

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
 Frame = +2

Query: 131 KQKKAHLMEIQINGGT-----IADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGY 295
           K +  H  + ++  G        +K   G      EV + ++F   + +DI G+TKGKG+
Sbjct: 66  KPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGL-SIFAVGQKVDIQGITKGKGF 124

Query: 296 EGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNGYHHRTEMNKKV 463
           +G + R    R+   TH         G+      P RV      +G  G   ++  N +V
Sbjct: 125 QGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEV 183

Query: 464 YKI 472
            KI
Sbjct: 184 IKI 186

---

>RL3_MYCGE (P47397) 50S ribosomal protein L3|
          Length = 257

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 316
           K++    +F+  E +D+  +TKG+G+ G + RW
Sbjct: 94  KKITPQELFKIGEYVDVTSLTKGRGFTGAIKRW 126

---

>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = -1

Query: 427 ILTSPSNSVG--HPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTDD 266
           + +SPS S+     S+  G+     +KT +GL    G TP  +N F    ++L  GY+ D
Sbjct: 68  VTSSPSRSMSATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGD 127

---

>RL3_RALSO (Q8XV12) 50S ribosomal protein L3|
          Length = 220

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 409
           +F  D+ ID+ G T GKGY G + R+  +  R      R       IG A  P RV    
Sbjct: 103 LFSVDQKIDVQGTTIGKGYAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
              G  G   RT  N  + +I
Sbjct: 163 RMTGHMGDVTRTVQNLVIVRI 183

---

>RL3_NITEU (Q82X88) 50S ribosomal protein L3|
          Length = 215

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
 Frame = +2

Query: 113 RKMKGLKQKKAHLMEIQINGGTIAD--KVDYGYNFFEK---EVPIDAVFQKDEMIDIIGV 277
           RK +  K    H  +  +  GT+    +VD+      K   E+ ++ +F+    +D+ G+
Sbjct: 57  RKNRITKALSGHFSQAGVEAGTVIKEFRVDHDIGSDIKIGSEISVE-LFEVGSKVDVCGI 115

Query: 278 TKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 448
           + GKGY G + R  +  +R      R       IG A  P RV       G  G    T 
Sbjct: 116 SIGKGYAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGNAQCTV 175

Query: 449 MNKKVYKI 472
            N +V ++
Sbjct: 176 QNIEVVRV 183

---

>RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3|
          Length = 255

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR---GLRKVACIG-AWHPARVSYTV 409
           F   + +DI GVT GKG+ G + RW    L R TH      R     G    P R     
Sbjct: 107 FVAGQKVDIQGVTVGKGFAGAMKRWNFGGL-RATHGVSVSHRSHGSTGNRQDPGRTFPGK 165

Query: 410 ARAGQNGYHHRTEMNKKVYKI 472
             AG  G    T +N  V+K+
Sbjct: 166 KMAGHLGQETVTTLNVTVWKV 186

---

>RL3_MYCPN (P75580) 50S ribosomal protein L3|
          Length = 287

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARA 418
           +FQ  E +D+  ++KG+G+ G + RW     P             GA +P R   +V +A
Sbjct: 101 LFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGH----------GAGYPHRFQGSV-QA 149

Query: 419 GQNGYHHRTEMNKKVYKIGKV-GQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 595
           G+ G        ++V+K  K+ G   H+  T  +        + GF    ++    +++ 
Sbjct: 150 GRGG-----ASAQRVFKGKKMSGHYGHEKVTVQN------LRIVGFDEANML----VLVS 194

Query: 596 GCCVGPKKRVVTLRQSLLK 652
           G   GP+  VV +R +  K
Sbjct: 195 GAIAGPEGGVVLIRTAKKK 213

---

>RL3_YERPS (P11252) 50S ribosomal protein L3|
          Length = 209

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 316
           +E+ ++ +F   + +D+ G +KGKG+ G V RW
Sbjct: 94  QEISVE-IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3|
          Length = 209

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 316
           +E+ ++ +F   + +D+ G +KGKG+ G V RW
Sbjct: 94  QEISVE-IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_PSEPK (Q88QN5) 50S ribosomal protein L3|
          Length = 211

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRW 316
           +F   +++D+ G +KGKG+ G + RW
Sbjct: 100 LFTAGQLVDVTGQSKGKGFAGTIKRW 125

---

>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -1

Query: 436 VVSILTSPSNSVGHPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTD 269
           V  I+T   N     S+  G+     +KT +GL    G TP  +N F    ++L  GY+ 
Sbjct: 67  VGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSG 126

Query: 268 D 266
           D
Sbjct: 127 D 127

---

>RL3_STRCO (Q9L0E0) 50S ribosomal protein L3|
          Length = 214

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = +2

Query: 218 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HP 388
           +E+  +A F+    +D+   +KGKG+ GV+ R      +     HR  R    IG    P
Sbjct: 98  QEITAEA-FESGVKVDVTAKSKGKGFAGVMKRHNFKGGKASHGAHRVHRMPGSIGGCATP 156

Query: 389 ARVSYTVARAGQNGYHHRTEMNKKVYKI 472
            RV   +  AG+ G    T  N  V+ +
Sbjct: 157 GRVFKGMRMAGRMGNERVTTQNLTVHAV 184

---

>RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3|
          Length = 209

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRW 316
           +F   + +D+ G +KGKG+ G V RW
Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_ONYPE (P60455) 50S ribosomal protein L3|
          Length = 157

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 334
           +FQ  +++D+ G +KGKG+ G + R   +R P
Sbjct: 42  LFQVGDLVDVTGTSKGKGFAGSIKRHNQSRGP 73

---

>RL3_SHIFL (P60447) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 406
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_SALTY (P60446) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 406
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_SALTI (P60445) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 406
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECOLI (P60438) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 406
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECOL6 (P60439) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 406
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECO57 (P60440) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 406
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_SHEON (Q8EK68) 50S ribosomal protein L3|
          Length = 212

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = +2

Query: 239 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 406
           +F     +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 103 IFADVAKVDVTGQSKGKGFQGGVKRWNF-RTQDMTHGNSLSHRSNGSIGQNQTPGRVFKG 161

Query: 407 VARAGQNGYHHRTEMNKKVYKI 472
              +G  G    T  N  V ++
Sbjct: 162 KKMSGHMGAERVTTQNLDVVRV 183

---

>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)|
           (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment)
          Length = 572

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = +2

Query: 395 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 559
           + Y     G + Y        +   +G  GQ     ET+ + +  +R++ D+TP+GG P 
Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460

Query: 560 YGV 568
            GV
Sbjct: 461 RGV 463

---

>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)|
            (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte
            nuclear envelope protein 1) (Myne-1) (Enaptin)
          Length = 8797

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +2

Query: 128  LKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDI 268
            +KQ KA   EI +N   I   +  G    EK  P+DA   ++E+ ++
Sbjct: 8146 IKQLKAFQQEISLNHNKIEQIIAQGEQLIEKSEPLDAAIIEEELDEL 8192

---

>RL3_BRAJA (Q89J84) 50S ribosomal protein L3|
          Length = 238

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +2

Query: 224 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 346
           +P+ A  Q D     + +D+ G + GKG+ G + RW    L R TH
Sbjct: 91  IPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGL-RATH 135

---

>HOY1_YARLI (Q99160) Homeobox protein HOY1|
          Length = 509

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = -1

Query: 433 VSILTSPSNSVGHPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTFITLTLGYTDDVNHL 254
           V+ +T+PS  V + + +      NL  T +G       TP   + F    LG+  D+N L
Sbjct: 405 VAHVTNPSGHVTNHNHLSDP-AANLTSTILGNVTPGHTTPVLDDGF---ELGHVTDINDL 460

Query: 253 IFLENRINGDFLLKEVVTIVHLIGNGA-TID 164
           + +   +       E+ +  H+I N A T+D
Sbjct: 461 VSVAQLLPNHVTEAELASNCHMIANNAFTLD 491

---

>PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1003

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 425 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 324
           +D+ E++ R P +++R   R    D C SC EGG
Sbjct: 33  TDEAEKRSRKPEKESRRSGRATNHDSCDSCKEGG 66

---

>SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat protein 2)|
            (Syne-2) (Synaptic nuclear envelope protein 2) (Nucleus
            and actin connecting element protein) (NUANCE protein)
          Length = 6885

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +2

Query: 98   AHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDI 268
            A  ++R++ G +Q      EI +N   I   + +G    +K  P+DAV  +DE+ ++
Sbjct: 6279 ADDKMRQLNGFQQ------EITLNTNKIDQLIVFGEQLIQKSEPLDAVLIEDELEEL 6329

---

>RL3_PROMM (Q7V542) 50S ribosomal protein L3|
          Length = 218

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGA-WHPARVSYTVAR 415
           F+  + +D+ G T G+G+ G   R G +R P     +  R+    GA   P R+      
Sbjct: 102 FEAGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRM 161

Query: 416 AGQNGYHHRTEMNKKVYKI 472
           AG+ G   RT     + K+
Sbjct: 162 AGRYGGKKRTTRGLTILKV 180

---

>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)|
          Length = 241

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +2

Query: 224 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 346
           +P+ A  Q D     + +D+ G + GKG+ G + RW    L R TH
Sbjct: 91  LPVGAEIQADHFVVGQFVDVTGTSTGKGFAGGMKRWNFGGL-RATH 135

---

>RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)|
          Length = 140

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWG 319
           F+  + +D+ G +KGKG+ GV+ R G
Sbjct: 105 FEAGQFVDVTGKSKGKGFAGVMKRHG 130

---

>RL3_RHOBA (Q7UN20) 50S ribosomal protein L3|
          Length = 228

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 5/139 (3%)
 Frame = +2

Query: 242 FQKDEMIDIIGVTKGKGYEGVVTRWG-----VTRLPRKTHRGLRKVACIGAWHPARVSYT 406
           F   + +DI G +KG+G+ GV+ R        T   +K HR         +  P+R    
Sbjct: 119 FNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSAS--PSRTFKG 176

Query: 407 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 586
              AGQ G    T  N +V ++        DA                         + L
Sbjct: 177 KRMAGQYGNAKVTTRNLEVVRV--------DAEN-----------------------NLL 205

Query: 587 MIKGCCVGPKKRVVTLRQS 643
           MI+G   GP    V++RQ+
Sbjct: 206 MIRGAVPGPNGGFVSIRQT 224

---

>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1004

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 425 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 324
           +D+ E++ R P ++ R   R    D C SC EGG
Sbjct: 33  TDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGG 66

---

>RK3_ODOSI (P49569) Chloroplast 50S ribosomal protein L3|
          Length = 196

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = +2

Query: 254 EMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAG 421
           + ID+ G + GKG+ G+  R   TR P     K HR    +       P RV      AG
Sbjct: 95  QFIDVTGKSSGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGM--GTTPGRVLPGKKMAG 152

Query: 422 QNGYHHRTEMNKKVYKIGKVGQE 490
           Q G  ++    KK+  I   G E
Sbjct: 153 QLG--NKVTKTKKLKIIQVNGNE 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,546,541
Number of Sequences: 219361
Number of extensions: 2041643
Number of successful extensions: 6349
Number of sequences better than 10.0: 187
Number of HSP's better than 10.0 without gapping: 5977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6246
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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