Clone Name	bags6i24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	117	1e-29
2	RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7	97	6e-24
3	NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl...	99	5e-23
4	NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl...	86	7e-19
5	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	79	7e-17
6	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	77	1e-16
7	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	77	1e-16
8	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	77	1e-16
9	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	77	1e-16
10	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	72	8e-16
11	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	74	8e-16
12	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	74	2e-15
13	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	75	3e-15
14	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	69	4e-15
15	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	77	5e-15
16	SAV_SULAC (Q07590) SAV protein	77	5e-15
17	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	70	5e-15
18	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	72	6e-15
19	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	70	1e-14
20	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	69	1e-14
21	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	69	1e-14
22	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	70	1e-14
23	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	70	1e-14
24	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	75	2e-14
25	PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso...	70	2e-14
26	VAT_THEAC (O05209) VCP-like ATPase	78	3e-14
27	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	71	3e-14
28	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	69	4e-14
29	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	71	4e-14
30	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	68	4e-14
31	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	68	5e-14
32	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	69	5e-14
33	PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	67	7e-14
34	PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxiso...	67	7e-14
35	CDC48_YEAST (P25694) Cell division control protein 48	67	7e-14
36	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	67	7e-14
37	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	69	9e-14
38	CDCH_HALSA (Q9HPF0) Protein cdcH	70	9e-14
39	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	70	9e-14
40	PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	65	1e-13
41	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	69	1e-13
42	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	62	1e-13
43	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	69	1e-13
44	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	69	2e-13
45	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	66	2e-13
46	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	66	2e-13
47	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	65	2e-13
48	PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)	67	3e-13
49	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	65	3e-13
50	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	65	3e-13
51	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	67	3e-13
52	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	66	4e-13
53	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	67	4e-13
54	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	67	4e-13
55	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	68	5e-13
56	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	65	5e-13
57	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	64	7e-13
58	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	67	7e-13
59	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	63	9e-13
60	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	63	9e-13
61	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	65	9e-13
62	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	64	9e-13
63	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	62	1e-12
64	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	64	1e-12
65	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	64	1e-12
66	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	64	1e-12
67	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	64	1e-12
68	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	64	1e-12
69	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	64	1e-12
70	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	65	1e-12
71	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	64	1e-12
72	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	64	2e-12
73	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	65	2e-12
74	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	63	3e-12
75	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	64	4e-12
76	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	63	6e-12
77	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	60	7e-12
78	PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)	64	9e-12
79	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	61	1e-11
80	PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	60	2e-11
81	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	60	3e-11
82	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	61	3e-11
83	PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	60	4e-11
84	PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T...	62	5e-11
85	PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P...	66	5e-11
86	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	60	6e-11
87	PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi...	66	8e-11
88	PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi...	58	1e-10
89	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	66	1e-10
90	NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	59	1e-10
91	NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleim...	57	2e-10
92	NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleim...	56	2e-10
93	PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T...	60	2e-10
94	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	54	2e-10
95	PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)	65	2e-10
96	PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote...	56	3e-10
97	PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)	57	4e-10
98	TBP7_CAEEL (P54816) TAT-binding homolog 7	58	4e-10
99	NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	59	4e-10
100	PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro...	59	4e-10
101	PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P...	59	4e-10
102	PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P...	59	4e-10
103	PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P...	59	4e-10
104	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	59	4e-10
105	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	64	4e-10
106	PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (...	55	5e-10
107	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	54	5e-10
108	SEC18_YEAST (P18759) Vesicular-fusion protein SEC18	54	5e-10
109	NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	57	5e-10
110	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	54	6e-10
111	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	54	6e-10
112	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	54	6e-10
113	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	54	6e-10
114	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	60	1e-09
115	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	60	1e-09
116	NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	55	1e-09
117	NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	55	1e-09
118	PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi...	58	1e-09
119	PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)...	58	1e-09
120	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	62	2e-09
121	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	60	2e-09
122	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	60	2e-09
123	AFG2_YEAST (P32794) Protein AFG2	55	2e-09
124	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	53	2e-09
125	FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2...	61	3e-09
126	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	57	3e-09
127	PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo...	60	3e-09
128	PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ...	57	3e-09
129	PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ...	60	3e-09
130	PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ...	60	3e-09
131	PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom...	60	3e-09
132	PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom...	60	3e-09
133	PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom...	60	3e-09
134	FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2...	61	3e-09
135	PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)	52	4e-09
136	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	52	4e-09
137	PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4	56	4e-09
138	PRS8_DROME (O18413) 26S protease regulatory subunit 8	59	4e-09
139	PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro...	59	4e-09
140	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	54	4e-09
141	FTSH_CHLVU (P56369) Cell division protein ftsH homolog	47	5e-09
142	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	60	6e-09
143	TBP7_YEAST (P40340) TAT-binding homolog 7	53	6e-09
144	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	56	6e-09
145	PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog	55	6e-09
146	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	60	8e-09
147	PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)	51	8e-09
148	PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)	56	8e-09
149	PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot...	56	8e-09
150	PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot...	56	8e-09
151	PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot...	56	1e-08
152	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	59	1e-08
153	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	57	1e-08
154	PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7	55	2e-08
155	PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)...	54	2e-08
156	PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B	54	2e-08
157	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	55	2e-08
158	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	55	2e-08
159	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	55	2e-08
160	PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ...	58	2e-08
161	PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin...	58	3e-08
162	PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	49	3e-08
163	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	57	4e-08
164	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	50	4e-08
165	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	57	5e-08
166	PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T...	55	5e-08
167	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	52	8e-08
168	PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C...	52	9e-08
169	PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog	54	1e-07
170	PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)	55	1e-07
171	PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)	49	2e-07
172	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	55	2e-07
173	PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	46	2e-07
174	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	50	2e-07
175	PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi...	53	2e-07
176	PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin...	53	2e-07
177	PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin...	53	3e-07
178	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	54	3e-07
179	PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P...	54	5e-07
180	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	54	5e-07
181	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	50	7e-07
182	PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b...	52	9e-07
183	PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ...	53	9e-07
184	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	47	3e-06
185	PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub...	50	6e-06
186	PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog	49	1e-05
187	PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b...	47	1e-05
188	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	45	1e-05
189	SPAST_HUMAN (Q9UBP0) Spastin	48	2e-05
190	SPAST_MOUSE (Q9QYY8) Spastin	48	2e-05
191	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	47	4e-05
192	SAP1_YEAST (P39955) Protein SAP1	46	9e-05
193	YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)	38	2e-04
194	YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46	45	3e-04
195	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	41	0.004
196	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	41	0.004
197	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	41	0.004
198	AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)	39	0.011
199	VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)	39	0.014
200	PRS2_METTM (P42811) Putative 26S protease regulatory subunit hom...	29	0.015
201	YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)	38	0.031
202	HEM1_SYNPX (Q7U769) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)	38	0.031
203	YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)	36	0.089
204	HEM1_PROMA (Q7VCA1) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)	35	0.20
205	Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c	27	0.31
206	Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175	27	0.31
207	Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316	27	0.31
208	HEM1_PROMM (Q7V809) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)	33	0.76
209	VIME_CYPCA (Q92155) Vimentin	31	2.9
210	HEM1_PROMP (Q7V1T7) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)	31	3.7
211	DAX1_RAT (P70503) Nuclear receptor 0B1 (Nuclear receptor DAX-1)	31	3.7
212	RS7_LEGPL (Q5WZL6) 30S ribosomal protein S7	30	4.9
213	RS7_LEGPH (Q5ZYP7) 30S ribosomal protein S7	30	4.9
214	RS7_LEGPA (Q5X863) 30S ribosomal protein S7	30	4.9
215	VIME_BOVIN (P48616) Vimentin	30	4.9
216	CLPB_STRMU (Q8DTC7) Chaperone clpB	30	4.9
217	P53_BRARE (P79734) Cellular tumor antigen p53 (Tumor suppressor ...	30	4.9
218	VIME_PANTR (Q5R1W8) Vimentin	30	6.4
219	VIME_MACFA (Q4R4X4) Vimentin	30	6.4
220	VIME_HUMAN (P08670) Vimentin	30	6.4
221	VIME_CERAE (P84198) Vimentin	30	6.4
222	SMY1_YEAST (P32364) Kinesin-related protein SMY1 (Suppressor pro...	30	6.4
223	ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT...	30	6.4
224	BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain ...	30	6.4
225	YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragm...	30	6.4
226	RS7_THICU (O50564) 30S ribosomal protein S7	30	6.4
227	NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pr...	30	8.3
228	SERR_DROME (P18168) Serrate protein precursor (Protein beaded)	30	8.3
229	NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 pr...	30	8.3

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>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score =  117 bits (294), Expect(2) = 1e-29
 Identities = 68/130 (52%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            DV+D A LRPGRFG   +VPLP ADER +ILKA   KK +   VDL+ IA+   C   +G
Sbjct: 674  DVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNN-CEGFSG 732

Query: 256  ADLASLVNEAAMAALEERCEFLAKGDSSMS--TDLTN-KIKLQHFEHALSKVKPSVSEQQ 426
            ADLA LV +A   A+EE    +   +SS    TD+T   IK +HFE ALS V PSV++QQ
Sbjct: 733  ADLAHLVQKATFQAVEE---MIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQ 789

Query: 427  RKHFDALSKK 456
            R+H+DALS K
Sbjct: 790  RRHYDALSTK 799



 Score = 37.4 bits (85), Expect = 0.040
 Identities = 31/115 (26%), Positives = 48/115 (41%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+ R GRF  +  +  P  D R  IL    +K  L    D + IAR        G
Sbjct: 390 DALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTP--GFVG 447

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSE 420
           ADL S+   A   A++   +      S    D  + +++   E  L K+   +S+
Sbjct: 448 ADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWLRMPWPEEELEKLFVKMSD 502



 Score = 32.0 bits (71), Expect(2) = 1e-29
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q LVELDG ++R+ VYVIGATN
Sbjct: 651 QFLVELDGGERRN-VYVIGATN 671

---

>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score = 97.1 bits (240), Expect(2) = 6e-24
 Identities = 56/143 (39%), Positives = 82/143 (57%), Gaps = 16/143 (11%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKK--TLSEDVDLETIARREECNNL 249
            D+ID A+LRPGR  K  F+ LP  +E++ I+K  T+     LS DVD E I R E+CNN 
Sbjct: 680  DMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNF 739

Query: 250  TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--------------IKLQHFEH 387
            +GADLA+LV E+++ AL+ +     +  S +  DL  +              + +  F  
Sbjct: 740  SGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRS 799

Query: 388  ALSKVKPSVSEQQRKHFDALSKK 456
            AL K+KPSVS++ R  +D L+KK
Sbjct: 800  ALRKIKPSVSDKDRLKYDRLNKK 822



 Score = 37.0 bits (84), Expect = 0.052
 Identities = 25/91 (27%), Positives = 44/91 (48%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+ R GRF ++  + +P    R+ ILK  ++   +   +D   +A+        G
Sbjct: 357 DSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTP--GFVG 414

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMST 348
           ADL +LV  A   A++   +  A   S+ +T
Sbjct: 415 ADLKALVTAAGTCAIKRIFQTYANIKSTPTT 445



 Score = 33.5 bits (75), Expect(2) = 6e-24
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL ELDG + R G++VIGATN
Sbjct: 657 LLTELDGLNDRRGIFVIGATN 677

---

>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
            protein) (NVLp)
          Length = 855

 Score = 99.0 bits (245), Expect(2) = 5e-23
 Identities = 62/132 (46%), Positives = 82/132 (62%), Gaps = 3/132 (2%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKT---LSEDVDLETIARREECNN 246
            D+ID A+LRPGR  K  FV LP   +RVAILK  T+  T   L EDV+LETIA    CN 
Sbjct: 727  DIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNC 786

Query: 247  LTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQ 426
             TGADL +LV EA++ AL  R E  A+ +   + +L  K+  +HFE A  KVKPS+S + 
Sbjct: 787  YTGADLTALVREASLCAL--RQEITAQKNGVGAGEL--KVSHKHFEDAFKKVKPSISIKD 842

Query: 427  RKHFDALSKKYS 462
            +  ++AL +  S
Sbjct: 843  QVMYEALQRSLS 854



 Score = 35.4 bits (80), Expect = 0.15
 Identities = 25/75 (33%), Positives = 36/75 (48%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+ R GRF ++  + +P    R  IL+    K  L E  +   +A         G
Sbjct: 413 DSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTP--GFVG 470

Query: 256 ADLASLVNEAAMAAL 300
           ADL +L  EAAM A+
Sbjct: 471 ADLMALCREAAMCAV 485



 Score = 28.5 bits (62), Expect(2) = 5e-23
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG + R  V+++ ATN
Sbjct: 703 QLLTEMDGLETRQQVFILAATN 724

---

>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
            protein) (NVLp)
          Length = 856

 Score = 85.5 bits (210), Expect(2) = 7e-19
 Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTE---KKTLSEDVDLETIARREECNN 246
            D+ID A+LRPGR  K  FV LP   +R+AILK  T+   K  L  DV+LE IA    C+ 
Sbjct: 728  DIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDC 787

Query: 247  LTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQ 426
             TGADL++LV EA++ AL +       G+      +++K    HFE A  KV+ S+S++ 
Sbjct: 788  YTGADLSALVREASICALRQEMARQKSGNEKGELKVSHK----HFEEAFKKVRSSISKKD 843

Query: 427  RKHFDALSKKYS 462
            +  ++ L +  S
Sbjct: 844  QIMYERLQESLS 855



 Score = 36.2 bits (82), Expect = 0.089
 Identities = 25/75 (33%), Positives = 36/75 (48%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+ R GRF ++  + +P    R  IL+    K  L +  D   +A         G
Sbjct: 414 DSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTP--GFVG 471

Query: 256 ADLASLVNEAAMAAL 300
           ADL +L  EAAM A+
Sbjct: 472 ADLMALCREAAMCAV 486



 Score = 28.1 bits (61), Expect(2) = 7e-19
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG + R  V+++ ATN
Sbjct: 704 QLLTEMDGLEARQQVFIMAATN 725

---

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 79.3 bits (194), Expect(2) = 7e-17
 Identities = 43/128 (33%), Positives = 73/128 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D+ID A+LRPGR  +  ++P P    RV I K H   K L++DV++E +A + E    +G
Sbjct: 603 DMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTE--GYSG 660

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKH 435
           AD+ ++  EA M A+ E  +     + +       KI  +HFE AL KV+PS++++  + 
Sbjct: 661 ADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDVEK 720

Query: 436 FDALSKKY 459
           ++ L + +
Sbjct: 721 YEKLIEDF 728



 Score = 69.3 bits (168), Expect(2) = 4e-13
 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D ID A+ RPGRF ++  + +P  + R  IL+ HT K  L+EDVDLE +A  E  N   G
Sbjct: 329 DAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELA--ELTNGFVG 386

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKL--QHFEHALSKVKPSVSEQ 423
           ADL +L  EAAM AL      +      +  ++   +K+  + F  AL  ++PS   +
Sbjct: 387 ADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKNIEPSAMRE 444



 Score = 27.3 bits (59), Expect(2) = 7e-17
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG ++   V VI ATN
Sbjct: 579 QLLTELDGLEELKDVVVIAATN 600



 Score = 24.6 bits (52), Expect(2) = 4e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG + R  V VI ATN
Sbjct: 305 QLLALMDGLEARGDVIVIAATN 326

---

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score = 77.0 bits (188), Expect(2) = 1e-16
 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP    RVAILKA+  K  +++DVDLE +A+    N  +G
Sbjct: 626  DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM--TNGFSG 683

Query: 256  ADLASLVNEAAMAALEERCEFLAKGDSSMST----------DLTNKIKLQHFEHALSKVK 405
            ADL  +   A   A+ E  E   + +    T          D   +I+  HFE A+   +
Sbjct: 684  ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFAR 743

Query: 406  PSVSEQQRKHFDALSK 453
             SVS+   + ++  ++
Sbjct: 744  RSVSDNDIRKYEMFAQ 759



 Score = 69.7 bits (169), Expect(2) = 4e-13
 Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P A  R+ IL+ HT+   L++DVDLE +A   E +   GAD
Sbjct: 352 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA--NETHGHVGAD 409

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           LA+L +EAA+ A+ ++ + +   D ++  ++ N   + +  F  ALS+  PS
Sbjct: 410 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461



 Score = 29.3 bits (64), Expect(2) = 1e-16
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+L E+DG   +  V++IGATN
Sbjct: 602 QILTEMDGMSTKKNVFIIGATN 623



 Score = 24.3 bits (51), Expect(2) = 4e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG  QR  V V+ ATN
Sbjct: 326 QLLTLMDGLKQRAHVIVMAATN 347

---

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score = 77.0 bits (188), Expect(2) = 1e-16
 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP    RVAILKA+  K  +++DVDLE +A+    N  +G
Sbjct: 626  DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM--TNGFSG 683

Query: 256  ADLASLVNEAAMAALEERCEFLAKGDSSMST----------DLTNKIKLQHFEHALSKVK 405
            ADL  +   A   A+ E  E   + +    T          D   +I+  HFE A+   +
Sbjct: 684  ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFAR 743

Query: 406  PSVSEQQRKHFDALSK 453
             SVS+   + ++  ++
Sbjct: 744  RSVSDNDIRKYEMFAQ 759



 Score = 69.7 bits (169), Expect(2) = 4e-13
 Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P A  R+ IL+ HT+   L++DVDLE +A   E +   GAD
Sbjct: 352 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA--NETHGHVGAD 409

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           LA+L +EAA+ A+ ++ + +   D ++  ++ N   + +  F  ALS+  PS
Sbjct: 410 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461



 Score = 29.3 bits (64), Expect(2) = 1e-16
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+L E+DG   +  V++IGATN
Sbjct: 602 QILTEMDGMSTKKNVFIIGATN 623



 Score = 24.3 bits (51), Expect(2) = 4e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG  QR  V V+ ATN
Sbjct: 326 QLLTLMDGLKQRAHVIVMAATN 347

---

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score = 77.0 bits (188), Expect(2) = 1e-16
 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP    RVAILKA+  K  +++DVDLE +A+    N  +G
Sbjct: 626  DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM--TNGFSG 683

Query: 256  ADLASLVNEAAMAALEERCEFLAKGDSSMST----------DLTNKIKLQHFEHALSKVK 405
            ADL  +   A   A+ E  E   + +    T          D   +I+  HFE A+   +
Sbjct: 684  ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFAR 743

Query: 406  PSVSEQQRKHFDALSK 453
             SVS+   + ++  ++
Sbjct: 744  RSVSDNDIRKYEMFAQ 759



 Score = 69.7 bits (169), Expect(2) = 4e-13
 Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P A  R+ IL+ HT+   L++DVDLE +A   E +   GAD
Sbjct: 352 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA--NETHGHVGAD 409

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           LA+L +EAA+ A+ ++ + +   D ++  ++ N   + +  F  ALS+  PS
Sbjct: 410 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461



 Score = 29.3 bits (64), Expect(2) = 1e-16
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+L E+DG   +  V++IGATN
Sbjct: 602 QILTEMDGMSTKKNVFIIGATN 623



 Score = 24.3 bits (51), Expect(2) = 4e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG  QR  V V+ ATN
Sbjct: 326 QLLTLMDGLKQRAHVIVMAATN 347

---

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score = 77.0 bits (188), Expect(2) = 1e-16
 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP    RVAILKA+  K  +++DVDLE +A+    N  +G
Sbjct: 626  DIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM--TNGFSG 683

Query: 256  ADLASLVNEAAMAALEERCEFLAKGDSSMST----------DLTNKIKLQHFEHALSKVK 405
            ADL  +   A   A+ E  E   + +    T          D   +I+  HFE A+   +
Sbjct: 684  ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFAR 743

Query: 406  PSVSEQQRKHFDALSK 453
             SVS+   + ++  ++
Sbjct: 744  RSVSDNDIRKYEMFAQ 759



 Score = 69.7 bits (169), Expect(2) = 4e-13
 Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P A  R+ IL+ HT+   L++DVDLE +A   E +   GAD
Sbjct: 352 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA--NETHGHVGAD 409

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           LA+L +EAA+ A+ ++ + +   D ++  ++ N   + +  F  ALS+  PS
Sbjct: 410 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461



 Score = 29.3 bits (64), Expect(2) = 1e-16
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+L E+DG   +  V++IGATN
Sbjct: 602 QILTEMDGMSTKKNVFIIGATN 623



 Score = 24.3 bits (51), Expect(2) = 4e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG  QR  V V+ ATN
Sbjct: 326 QLLTLMDGLKQRAHVIVMAATN 347

---

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 72.4 bits (176), Expect(2) = 8e-16
 Identities = 37/74 (50%), Positives = 49/74 (66%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF ++ F+P P    R  ILK H   K L++DVDLE +AR       TG
Sbjct: 305 DILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATP--GFTG 362

Query: 256 ADLASLVNEAAMAA 297
           ADL +L+NEAA+ A
Sbjct: 363 ADLENLLNEAALLA 376



 Score = 30.8 bits (68), Expect(2) = 8e-16
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG D   G+ VI ATN
Sbjct: 281 QLLVEMDGFDTSDGIIVIAATN 302

---

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 73.9 bits (180), Expect(2) = 8e-16
 Identities = 42/117 (35%), Positives = 64/117 (54%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF +   VP+PG + R  ILK H EK TL+ED+D + +A+  E   ++G
Sbjct: 309 DVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATE--GMSG 366

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQ 426
           ADL ++  EA M A+    E                ++++ F  A+ KV  +   Q+
Sbjct: 367 ADLKAIATEAGMFAVRRDKEL---------------VEMEEFLEAVEKVSMAADTQK 408



 Score = 29.3 bits (64), Expect(2) = 8e-16
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D+R  + +I ATN
Sbjct: 285 QLLAEMDGFDKRKNIRIIAATN 306

---

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score = 73.6 bits (179), Expect(2) = 2e-15
 Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP    R+AILKA+  K  +++DVD++ +A+    N  +G
Sbjct: 627  DIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKM--TNGFSG 684

Query: 256  ADLASLVNEAAMAALEERCEFLAKGDSSMST----------DLTNKIKLQHFEHALSKVK 405
            ADL  +   A   A+ E  E   + +    T          D   +I+  HFE A+   +
Sbjct: 685  ADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRLAR 744

Query: 406  PSVSEQQRKHFDALSK 453
             SVS+   + ++  ++
Sbjct: 745  RSVSDNDIRKYEMFAQ 760



 Score = 68.2 bits (165), Expect(2) = 1e-12
 Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P +  R+ IL+ HT+   LS+DVDLE +A   E +   GAD
Sbjct: 353 IDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVA--NETHGHVGAD 410

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           LA+L +EAA+ A+ ++ + +   D ++  ++ N   + +  F   LS+  PS
Sbjct: 411 LAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWGLSQSNPS 462



 Score = 28.5 bits (62), Expect(2) = 2e-15
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+L E+DG   +  V++IGATN
Sbjct: 603 QILTEMDGMSIKKNVFIIGATN 624



 Score = 24.3 bits (51), Expect(2) = 1e-12
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG  QR  V V+ ATN
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATN 348

---

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 75.5 bits (184), Expect(2) = 3e-15
 Identities = 40/73 (54%), Positives = 54/73 (73%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           IDV+D A+LRPGRF ++  V LP  + R+AILK H++KK + +DV LE IARR      +
Sbjct: 319 IDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTP--GFS 376

Query: 253 GADLASLVNEAAM 291
           GADLA+L+NEAA+
Sbjct: 377 GADLANLLNEAAI 389



 Score = 25.8 bits (55), Expect(2) = 3e-15
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV V+ ATN
Sbjct: 296 QLLTEMDGFSGDTGVIVVAATN 317

---

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 69.3 bits (168), Expect(2) = 4e-15
 Identities = 36/78 (46%), Positives = 50/78 (64%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGRF +   VPLP  + R+ I K HT K  L+EDVD + +AR  E    +
Sbjct: 290 IDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITE--GAS 347

Query: 253 GADLASLVNEAAMAALEE 306
           GAD+ ++  EA M A+ E
Sbjct: 348 GADIKAICTEAGMFAIRE 365



 Score = 31.6 bits (70), Expect(2) = 4e-15
 Identities = 16/22 (72%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG D R  V VIGATN
Sbjct: 267 QLLAELDGFDPRGDVKVIGATN 288

---

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
           (p97/CDC48 homolog 2)
          Length = 810

 Score = 77.4 bits (189), Expect(2) = 5e-15
 Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P A  R+ IL+ HT+   L EDVDLE +A   EC+   GAD
Sbjct: 358 IDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVA--NECHGFVGAD 415

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           LASL +EAA+  + E+ E +   D ++  ++ N   + +++F  A+ K  PS
Sbjct: 416 LASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPS 467



 Score = 66.6 bits (161), Expect(2) = 1e-13
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID AVLRPGR  +  ++PLP    R+ I KA   K  LS D+DL  +A+       +G
Sbjct: 632  DIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTV--GFSG 689

Query: 256  ADLASLVNEAAMAAL-----------EERCEFLAKGDSSMSTDLTN---KIKLQHFEHAL 393
            ADL  +   A   A+           +ER +  A+G+  M  +L +   +I   HFE A+
Sbjct: 690  ADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAM 749

Query: 394  SKVKPSVSEQQRKHFDALSK 453
               + SV++   + ++  ++
Sbjct: 750  KFARRSVTDNDIRKYEMFAQ 769



 Score = 29.3 bits (64), Expect(2) = 1e-13
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+L E+DG + +  V++IGATN
Sbjct: 608 QVLTEMDGMNAKKNVFIIGATN 629



 Score = 23.1 bits (48), Expect(2) = 5e-15
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V VI ATN
Sbjct: 332 QLLTLMDGLKTRAHVVVIAATN 353

---

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score = 77.0 bits (188), Expect(2) = 5e-15
 Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 15/142 (10%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D++D A+LRPGRF +  +VP P    R  ILK HT+   L+EDV LE IA  E+    TG
Sbjct: 635  DILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIA--EKAEGYTG 692

Query: 256  ADLASLVNEA---AMAALEERCEFLAKGDSSMSTD------------LTNKIKLQHFEHA 390
            ADL +LV EA   AM ++   C+  ++ +   + +             + K+  + FE A
Sbjct: 693  ADLEALVREATINAMRSIYSMCDKQSRDECKGNMECYQKHIKECMNKTSFKVSKEDFEKA 752

Query: 391  LSKVKPSVSEQQRKHFDALSKK 456
            L+ VK S+++   + ++  SK+
Sbjct: 753  LNVVKASLTQADIQRYERFSKE 774



 Score = 60.5 bits (145), Expect(2) = 1e-10
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D ID A+ RPGRF ++  +  P    R  IL+ HT    +++DVDL+ +A  E     TG
Sbjct: 359 DAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLA--EMTYGYTG 416

Query: 256 ADLASLVNEAAMAAL----EERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSV 414
           ADLA+L  EAA+ AL    +E+   L +           K+ +  F +AL  ++PS+
Sbjct: 417 ADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPSL 473



 Score = 25.0 bits (53), Expect(2) = 1e-10
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V VIGATN
Sbjct: 335 QLLTLMDGIKGRGRVIVIGATN 356



 Score = 23.5 bits (49), Expect(2) = 5e-15
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG    + V +I ATN
Sbjct: 611 QLLAEMDGIVPLNKVVIIAATN 632

---

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 70.1 bits (170), Expect(2) = 5e-15
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   VP P    R+ ILK HT K  L+EDV+LE IA+  E     G
Sbjct: 320 DILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTE--GCVG 377

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV--KPSVSEQQR 429
           A+L ++  EA M A+ E               L + + +  F  A+ K+  K  V  ++ 
Sbjct: 378 AELKAICTEAGMNAIRE---------------LRDYVTMDDFRKAVEKIMEKKKVKVKEP 422

Query: 430 KHFDAL 447
            H D L
Sbjct: 423 AHLDVL 428



 Score = 30.4 bits (67), Expect(2) = 5e-15
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D R  V +IGATN
Sbjct: 296 QLLAEMDGFDARGDVKIIGATN 317

---

>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 72.4 bits (176), Expect(2) = 6e-15
 Identities = 37/76 (48%), Positives = 50/76 (65%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +DV+D A+LRPGRF ++  V +P    R+AILK H  +K L   V LE +ARR       
Sbjct: 302 VDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTA--GFA 359

Query: 253 GADLASLVNEAAMAAL 300
           GADLA+L+NEAA+ A+
Sbjct: 360 GADLANLLNEAAILAV 375



 Score = 27.7 bits (60), Expect(2) = 6e-15
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +   GV VI ATN
Sbjct: 279 QLLTEMDGFEGNTGVIVIAATN 300

---

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score = 69.7 bits (169), Expect(2) = 1e-14
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP  D R  I KA   K  LS+D+DL  +A+  +    +G
Sbjct: 631  DIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQ--GFSG 688

Query: 256  ADLASLVNEAAMAALEERCE-------FLAKGDSSMSTDLTN--KIKLQHFEHALSKVKP 408
            AD+  +   A   A+ E  E          +   SM  D+    +IK  HFE ++   + 
Sbjct: 689  ADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDEDVDEVPEIKPAHFEESMKYARR 748

Query: 409  SVSEQQRKHFDALSK 453
            SVS+   + + A ++
Sbjct: 749  SVSDADIRKYQAFAQ 763



 Score = 65.9 bits (159), Expect(2) = 4e-12
 Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P    R+ +L  HT+   L+E+VDLE I++  + +   GAD
Sbjct: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISK--DTHGYVGAD 414

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKL--QHFEHALSKVKPS 411
           LA+L  EAA+  + E+ + L   D ++  ++ N + +  +HF+ AL    PS
Sbjct: 415 LAALCTEAALQCIREKMDVLDLEDDTIDAEVLNSMAVTNEHFQTALGTSNPS 466



 Score = 29.6 bits (65), Expect(2) = 1e-14
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG + +  V++IGATN
Sbjct: 607 QLLTEMDGMNAKKTVFIIGATN 628



 Score = 24.6 bits (52), Expect(2) = 4e-12
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V V+GATN
Sbjct: 331 QLLTLMDGLKSRAHVIVMGATN 352

---

>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 68.9 bits (167), Expect(2) = 1e-14
 Identities = 39/92 (42%), Positives = 54/92 (58%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF ++  V LP    RV ILK H   K L EDV L  +A R      +G
Sbjct: 335 DILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTP--GFSG 392

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADLA+L+NEAA+ A   +   + K + + + D
Sbjct: 393 ADLANLLNEAAILATRYKKSSITKNEVNEAAD 424



 Score = 30.4 bits (67), Expect(2) = 1e-14
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG  +  GV V+GATN
Sbjct: 311 QLLTEMDGFKENKGVIVVGATN 332

---

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score = 69.3 bits (168), Expect(2) = 1e-14
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP  D R+ I KA   K  +++DVD+  +A+  +    +G
Sbjct: 631  DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQ--GFSG 688

Query: 256  ADLASLVNEAAMAALEERCEFLAKGDSSMS----------TDLTNKIKLQHFEHALSKVK 405
            AD+  +   A   A+ E  E   + +   S           D  ++IK  HFE ++   +
Sbjct: 689  ADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYAR 748

Query: 406  PSVSEQQRKHFDALSK 453
             SVS+   + + A ++
Sbjct: 749  RSVSDADIRKYQAFAQ 764



 Score = 69.3 bits (168), Expect(2) = 4e-13
 Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P    R+ +L+ HT+   L+EDVDLE I++  + +   GAD
Sbjct: 356 IDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISK--DTHGYVGAD 413

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKL--QHFEHALSKVKPS 411
           LA+L  EAA+  + E+ + +   D S+  ++ N + +  +HF  AL    PS
Sbjct: 414 LAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPS 465



 Score = 29.6 bits (65), Expect(2) = 1e-14
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG + +  V++IGATN
Sbjct: 607 QLLTEMDGMNAKKTVFIIGATN 628



 Score = 24.6 bits (52), Expect(2) = 4e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V V+GATN
Sbjct: 330 QLLTLMDGLKSRAHVIVMGATN 351

---

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 69.7 bits (169), Expect(2) = 1e-14
 Identities = 38/92 (41%), Positives = 53/92 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF +K  V  P    R AILK H + K L+EDVDL+ +A  ++     G
Sbjct: 336 DVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVA--QQTPGFVG 393

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADL +++NEAA+ A       +   D   + D
Sbjct: 394 ADLENVLNEAALVAARRNKSIIDASDIDEAED 425



 Score = 29.3 bits (64), Expect(2) = 1e-14
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL+E+DG +   G+ VI ATN
Sbjct: 312 QLLIEMDGFEGNEGIIVIAATN 333

---

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 69.7 bits (169), Expect(2) = 1e-14
 Identities = 38/92 (41%), Positives = 53/92 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF +K  V  P    R AILK H + K L+EDVDL+ +A  ++     G
Sbjct: 336 DVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVA--QQTPGFVG 393

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADL +++NEAA+ A       +   D   + D
Sbjct: 394 ADLENVLNEAALVAARRNKSIIDASDIDEAED 425



 Score = 29.3 bits (64), Expect(2) = 1e-14
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL+E+DG +   G+ VI ATN
Sbjct: 312 QLLIEMDGFEGNEGIIVIAATN 333

---

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
           (p97/CDC48 homolog 1)
          Length = 809

 Score = 75.5 bits (184), Expect(2) = 2e-14
 Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P A  R+ IL+ HT+   L++DVDLE IA   EC+   GAD
Sbjct: 359 IDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIA--NECHGFVGAD 416

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           LASL +EAA+  + E+ E +   D  +  ++ N   + +++F  A  K  PS
Sbjct: 417 LASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPS 468



 Score = 66.6 bits (161), Expect(2) = 1e-13
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID AVLRPGR  +  ++PLP    R  ILKA   K  LS+D+DL  +A+       +G
Sbjct: 634  DIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTV--GFSG 691

Query: 256  ADLASLVNEAAMAAL-----------EERCEFLAKGDSSMSTDLTN---KIKLQHFEHAL 393
            ADL  +   A   A+           +ER +  A+G+  M  D  +   +I   HFE A+
Sbjct: 692  ADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAM 751

Query: 394  SKVKPSVSEQQRKHFDALSK 453
               + SV++   + ++  ++
Sbjct: 752  KFARRSVTDNDIRKYEMFAQ 771



 Score = 29.3 bits (64), Expect(2) = 1e-13
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+L E+DG + +  V++IGATN
Sbjct: 610 QVLTEMDGMNAKKNVFIIGATN 631



 Score = 23.1 bits (48), Expect(2) = 2e-14
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  + VI ATN
Sbjct: 333 QLLTLMDGVKGRSNLVVIAATN 354

---

>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score = 69.7 bits (169), Expect(2) = 2e-14
 Identities = 43/109 (39%), Positives = 60/109 (55%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   + +P  D R+ ILK HTEK  L + VDL  +A+  E  N+ G
Sbjct: 298 DILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAE--NMVG 354

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           ADL ++  EA M A+ E  EF               IK+  F  A+SK+
Sbjct: 355 ADLKAVCTEAGMFAIREEREF---------------IKMDDFREAISKI 388



 Score = 28.5 bits (62), Expect(2) = 2e-14
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D R  V +I ATN
Sbjct: 274 QLLAEMDGFDSRGDVKIIAATN 295

---

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
 Frame = +1

Query: 10   LLNSMVQISVMV-FMLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK 186
            LL S+  I VM   +++      D++D A+LR GRF K  ++P P  + R++ILK HT+ 
Sbjct: 592  LLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKN 651

Query: 187  KTLSEDVDLETIARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKI 366
              L+ DVDL  IA+R E     GADL +L  EA M A  E            + D T+ +
Sbjct: 652  MPLAPDVDLNDIAQRTE--GYVGADLENLCREAGMNAYRE------------NPDATS-V 696

Query: 367  KLQHFEHALSKVKPSVSEQQRKHFDALSKKYS 462
              ++F  AL  ++PSV E+  K +  LS+  S
Sbjct: 697  SQKNFLDALKTIRPSVDEEVIKFYRTLSETMS 728



 Score = 52.0 bits (123), Expect(2) = 1e-08
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVD-----LETIARREE 237
           ID ID A+ RPGRF ++  + +P  + R  IL  HT    L    +     LE +A  + 
Sbjct: 336 IDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMA--DY 393

Query: 238 CNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKL--QHFEHALSKVKPS 411
                GADLA+LV E+AM AL      +   D  + T++  K+ +    F++AL  ++PS
Sbjct: 394 TYGFVGADLAALVRESAMNALRRYLPEIDL-DKPIPTEILEKMVVTEDDFKNALKSIEPS 452



 Score = 30.0 bits (66), Expect = 6.4
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  LDG +  +GV VIGATN
Sbjct: 591 QLLTSLDGIEVMNGVVVIGATN 612



 Score = 26.6 bits (57), Expect(2) = 1e-08
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG  +R  V VIGATN
Sbjct: 313 QLLTLMDGMKERGHVIVIGATN 334

---

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 71.2 bits (173), Expect(2) = 3e-14
 Identities = 39/88 (44%), Positives = 54/88 (61%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V  P    RV ILK H+  K + +DVD E +ARR      TG
Sbjct: 399 DVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTP--GFTG 456

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSS 339
           ADL +L+NEAA+ A     + ++K + S
Sbjct: 457 ADLQNLMNEAAILAARRELKEISKDEIS 484



 Score = 26.6 bits (57), Expect(2) = 3e-14
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV V+ ATN
Sbjct: 375 QLLTEMDGFSGNSGVIVLAATN 396

---

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score = 69.3 bits (168), Expect(2) = 4e-13
 Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P    R+ +L+ HT+   L+EDVDLE I++  + +   GAD
Sbjct: 356 IDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISK--DTHGYVGAD 413

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKL--QHFEHALSKVKPS 411
           LA+L  EAA+  + E+ + +   D S+  ++ N + +  +HF  AL    PS
Sbjct: 414 LAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPS 465



 Score = 67.8 bits (164), Expect(2) = 4e-14
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP  D R+ I KA   K  +++DVD+  +A+  +    +G
Sbjct: 630  DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQ--GFSG 687

Query: 256  ADLASLVNEAAMAALEERCEFLAKG-----------DSSMSTDLTNKIKLQHFEHALSKV 402
            AD+  +   A   A+ E  E   +            +  M  D  ++I+  HFE ++   
Sbjct: 688  ADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYA 747

Query: 403  KPSVSEQQRKHFDALSK 453
            + SVS+   + + A ++
Sbjct: 748  RRSVSDADIRKYQAFAQ 764



 Score = 29.6 bits (65), Expect(2) = 4e-14
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG + +  V++IGATN
Sbjct: 606 QLLTEMDGMNAKKTVFIIGATN 627



 Score = 24.6 bits (52), Expect(2) = 4e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V V+GATN
Sbjct: 330 QLLTLMDGLKSRAHVIVMGATN 351

---

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 70.9 bits (172), Expect(2) = 4e-14
 Identities = 39/88 (44%), Positives = 55/88 (62%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V  P    R+ IL+ H+  K L++DVD E IARR      TG
Sbjct: 402 DVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTP--GYTG 459

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSS 339
           ADL +L+NEAA+ A     + ++K + S
Sbjct: 460 ADLQNLMNEAAILAARRELKEISKDEIS 487



 Score = 26.6 bits (57), Expect(2) = 4e-14
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV V+ ATN
Sbjct: 378 QLLTEMDGFSGNSGVIVLAATN 399

---

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 67.8 bits (164), Expect(2) = 4e-14
 Identities = 46/109 (42%), Positives = 60/109 (55%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V LP    R  ILK H  K  LSEDVD   IAR       +G
Sbjct: 301 DVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTP--GFSG 358

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           ADLA+LVNEAA+        F A+ ++ +       + + HFE A  K+
Sbjct: 359 ADLANLVNEAAL--------FAARFNNRV-------VSMIHFEKAKDKI 392



 Score = 29.6 bits (65), Expect(2) = 4e-14
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG D   GV +I ATN
Sbjct: 277 QMLVEMDGFDGNEGVILIAATN 298

---

>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 68.2 bits (165), Expect(2) = 5e-14
 Identities = 43/118 (36%), Positives = 66/118 (55%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF ++  V  P  + R  +LK H   K L++DV+L+TIA R      +G
Sbjct: 315 DILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTP--GFSG 372

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQR 429
           ADL +L+NEAA+ A        A+ D +       KI + H E A+ +V    +++ R
Sbjct: 373 ADLENLLNEAALVA--------ARHDHT-------KISMIHIEEAIDRVIAGPAKKSR 415



 Score = 28.9 bits (63), Expect(2) = 5e-14
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG     G+ +I ATN
Sbjct: 291 QLLVEMDGFSANEGIIIIAATN 312

---

>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 69.3 bits (168), Expect(2) = 5e-14
 Identities = 38/92 (41%), Positives = 54/92 (58%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF ++  V +P    R+AIL+ H + K +   V LETIARR      +G
Sbjct: 322 DILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTP--GFSG 379

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADLA+L+NEAA+     R   +   +   S D
Sbjct: 380 ADLANLLNEAAILTARRRKSAMTMSEIDTSID 411



 Score = 27.7 bits (60), Expect(2) = 5e-14
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +   GV VI ATN
Sbjct: 298 QLLTEMDGFEGNTGVIVIAATN 319

---

>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 981

 Score = 66.6 bits (161), Expect(2) = 7e-14
 Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADE----RVAILKAHTEKKTLSEDVDLETIARREEC- 240
            D++D A+LRPGRF K  FV   GA E    ++ +L A T K  L   V L  +    +C 
Sbjct: 853  DLLDPALLRPGRFDKLVFV---GASEDRASQLRVLSAITRKFKLEASVSLANVL---DCC 906

Query: 241  -NNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS 417
               LTGADL SL ++A M AL+ R   L +G    S+ L   + ++    A ++++PSVS
Sbjct: 907  PPQLTGADLYSLCSDAMMTALKRRVRDLEEGLELRSSALL--LTMEDLLQAAARLQPSVS 964

Query: 418  EQQRKHFDALSKKYSA 465
            EQ+   +  + +K++A
Sbjct: 965  EQELLRYKRIQRKFAA 980



 Score = 30.8 bits (68), Expect = 3.7
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 130 VPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGADLASLVNEAAMAA 297
           VP+    +R++IL+A T    L ++V+L  +ARR  C      DL +L+     AA
Sbjct: 594 VPVLSEAQRLSILQALTAHLPLGQEVNLPQLARR--CAGFVVGDLYALLTHTCRAA 647



 Score = 30.0 bits (66), Expect(2) = 7e-14
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG      V+VIGATN
Sbjct: 829 QLLAELDGLHSTQDVFVIGATN 850

---

>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 978

 Score = 66.6 bits (161), Expect(2) = 7e-14
 Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADE----RVAILKAHTEKKTLSEDVDLETIARREEC- 240
            D++D A+LRPGRF K  FV   GA E    ++ +L A T K  L   V L  +    +C 
Sbjct: 850  DLLDPALLRPGRFDKLVFV---GASEDRASQLRVLSAITRKFKLEASVSLMNVL---DCC 903

Query: 241  -NNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS 417
               LTGADL SL ++A M AL+ R   L +G    S+ L   + ++    A ++++PSVS
Sbjct: 904  PPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALL--LTMEDLLQAAARLQPSVS 961

Query: 418  EQQRKHFDALSKKYSA 465
            EQ+   +  + +K++A
Sbjct: 962  EQELLRYKRIQRKFAA 977



 Score = 33.5 bits (75), Expect = 0.58
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +1

Query: 130 VPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGADLASLVNEAAMAA 297
           VP+    +R+++L+A T    L ++V+L  +ARR  C      DL +L+  A+ AA
Sbjct: 593 VPVLSESQRLSVLQALTAHLPLGQEVNLSQLARR--CAGFVVGDLYALLTHASRAA 646



 Score = 30.0 bits (66), Expect(2) = 7e-14
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG      V+VIGATN
Sbjct: 826 QLLAELDGLHSTQDVFVIGATN 847

---

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 67.0 bits (162), Expect(2) = 3e-12
 Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P A  R+ +L+ HT+   L++DVDLE +A   E +   GAD
Sbjct: 363 IDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALA--AETHGYVGAD 420

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           +ASL +EAAM  + E+ + +   +  +  ++ +   + + +F  AL    PS
Sbjct: 421 IASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPS 472



 Score = 65.9 bits (159), Expect(2) = 7e-14
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D ID A+LRPGR  +  +VPLP  + R++IL A   K  L   ++L  IA+  +    +G
Sbjct: 637  DQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQ--GFSG 694

Query: 256  ADLASLVNEAAMAALEERCEFL----------------------AKGDSSMSTDLTNKIK 369
            ADL  +V  AA  A+++  E                        AK +     D    I 
Sbjct: 695  ADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYIT 754

Query: 370  LQHFEHALSKVKPSVSEQQRKHFDALSKKYSAN 468
             +HF  A+   K SVS+ + + ++A S++  A+
Sbjct: 755  KEHFAEAMKTAKRSVSDAELRRYEAYSQQMKAS 787



 Score = 30.8 bits (68), Expect(2) = 7e-14
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG + +  V+VIGATN
Sbjct: 613 QLLTEMDGMNAKKNVFVIGATN 634



 Score = 24.3 bits (51), Expect(2) = 3e-12
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V VI ATN
Sbjct: 337 QLLTLMDGMKARSNVVVIAATN 358

---

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 67.4 bits (163), Expect(2) = 7e-14
 Identities = 40/117 (34%), Positives = 64/117 (54%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF +   VP+PG + R  ILK H  K TL+ D+D + +A+  E   ++G
Sbjct: 309 DVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTE--GMSG 366

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQ 426
           ADL ++  EA M        F  + D ++       ++++ F  A+ KV  +   Q+
Sbjct: 367 ADLKAIATEAGM--------FAVRKDKAL-------VEMEDFLEAVEKVSMAADTQK 408



 Score = 29.3 bits (64), Expect(2) = 7e-14
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D+R  + +I ATN
Sbjct: 285 QLLAEMDGFDKRKNIRIIAATN 306

---

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 68.9 bits (167), Expect(2) = 9e-14
 Identities = 36/77 (46%), Positives = 49/77 (63%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D+ID A+LRPGR  +   VP+P    R+ I K HT    L+EDV+LE +A++ E    TG
Sbjct: 600 DIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTE--GYTG 657

Query: 256 ADLASLVNEAAMAALEE 306
           AD+ +L  EAAM A+ E
Sbjct: 658 ADIEALCREAAMLAVRE 674



 Score = 65.1 bits (157), Expect(2) = 6e-12
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           + +D A+ RPGRF ++  + +P  + R  IL+ HT    L+EDVDL+ +A  +  +   G
Sbjct: 326 NALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLA--DVTHGFVG 383

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTN--KIKLQHFEHALSKVKPSVSEQ 423
           ADLA+L  EAAM AL      +      +  ++ +  K+ +  F+ AL  V+PS   +
Sbjct: 384 ADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMRE 441



 Score = 37.0 bits (84), Expect = 0.052
 Identities = 15/33 (45%), Positives = 25/33 (75%)
 Frame = +1

Query: 361 KIKLQHFEHALSKVKPSVSEQQRKHFDALSKKY 459
           KIK +HF  AL K+KPSVS++  + ++ L+++Y
Sbjct: 854 KIKKEHFMKALEKIKPSVSKEDMRVYEKLAQEY 886



 Score = 27.3 bits (59), Expect(2) = 9e-14
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG ++   V VI ATN
Sbjct: 576 QLLTELDGMEEPKDVVVIAATN 597



 Score = 25.0 bits (53), Expect(2) = 6e-12
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V VIGATN
Sbjct: 302 QLLTLMDGLKGRGQVVVIGATN 323

---

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 70.5 bits (171), Expect(2) = 2e-13
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D +D A+ RPGRF ++  + +P    R  ILK HT    LS+DV+L T+A  ++ +   
Sbjct: 335 VDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLA--DDTHGFV 392

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPSVSEQ 423
           GAD+ SL  EAAM AL      +   +  +   L ++  +K + F+ ALS+V+PS   +
Sbjct: 393 GADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKREDFKGALSEVEPSAMRE 451



 Score = 68.6 bits (166), Expect(2) = 9e-14
 Identities = 39/140 (27%), Positives = 72/140 (51%)
 Frame = +1

Query: 49  MLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIAR 228
           M++      D+ID A++R GRF +   V  PG + R  ILK HT+   L+ DV L  +A 
Sbjct: 601 MVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELA- 659

Query: 229 REECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKP 408
            E  +   G+DLA++  EAA+ AL +              +  + + + HF  A+  V+P
Sbjct: 660 -ERADGYVGSDLANIAREAAIEALRD-------------DEDADDVGMAHFRAAMENVRP 705

Query: 409 SVSEQQRKHFDALSKKYSAN 468
           ++++   +++D +  ++  +
Sbjct: 706 TITDDLMEYYDQVEDQFKGS 725



 Score = 27.7 bits (60), Expect(2) = 9e-14
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG ++   V VI ATN
Sbjct: 586 QLLTELDGLEEMEEVMVIAATN 607



 Score = 24.3 bits (51), Expect(2) = 2e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG + R  V VI ATN
Sbjct: 312 QLLTMMDGLEGRGQVIVIAATN 333

---

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 69.7 bits (169), Expect(2) = 9e-14
 Identities = 38/88 (43%), Positives = 54/88 (61%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V  P    RV IL+ H+  K L +DVD + +ARR      TG
Sbjct: 411 DVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTP--GFTG 468

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSS 339
           ADL +L+NEAA+ A     + ++K + S
Sbjct: 469 ADLQNLMNEAAILAARRELKEISKDEIS 496



 Score = 26.6 bits (57), Expect(2) = 9e-14
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV V+ ATN
Sbjct: 387 QLLTEMDGFSGNSGVIVLAATN 408

---

>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 980

 Score = 65.5 bits (158), Expect(2) = 1e-13
 Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADE----RVAILKAHTEKKTLSEDVDLETIARREEC- 240
            D++D A+LRPGRF K  FV   GA+E    ++ +L A T K  L   V L  +    +C 
Sbjct: 852  DLLDPALLRPGRFDKLVFV---GANEDRASQLRVLSAITRKFKLEPSVSLVNVL---DCC 905

Query: 241  -NNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS 417
               LTGADL SL ++A  AAL+ R   L +G    S+ L   + ++    A ++++PSVS
Sbjct: 906  PPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSSAL--MLTMEDLLQAAARLQPSVS 963

Query: 418  EQQRKHFDALSKKYSA 465
            EQ+   +  + +K++A
Sbjct: 964  EQELLRYKRIQRKFAA 979



 Score = 30.0 bits (66), Expect(2) = 1e-13
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG      V+VIGATN
Sbjct: 828 QLLAELDGLHSTQDVFVIGATN 849

---

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score = 69.3 bits (168), Expect(2) = 2e-13
 Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P    R+ +L+ HT+   LS+DVDLE IA+  + +   GAD
Sbjct: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAK--DTHGYVGAD 414

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKL--QHFEHALSKVKPS 411
           LA+L  EAA+  + E+ + +   D ++  ++ N + +  +HF+ AL    PS
Sbjct: 415 LAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPS 466



 Score = 66.2 bits (160), Expect(2) = 1e-13
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP  D R  I KA   K  ++++VDL  +AR  +    +G
Sbjct: 631  DIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQ--GFSG 688

Query: 256  ADLASLVNEAAMAALEERCEFLAKG-----------DSSMSTDLTNKIKLQHFEHALSKV 402
            AD+  +   A   A+ E  E   +            D     D   +IK  HFE ++   
Sbjct: 689  ADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFA 748

Query: 403  KPSVSEQQRKHFDALSK 453
            + SVS+   + + A ++
Sbjct: 749  RRSVSDADIRKYQAFAQ 765



 Score = 29.3 bits (64), Expect(2) = 1e-13
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG   +  V++IGATN
Sbjct: 607 QLLTEMDGMSAKKTVFIIGATN 628



 Score = 25.8 bits (55), Expect(2) = 2e-13
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V VIGATN
Sbjct: 331 QLLTLMDGLKSRAHVIVIGATN 352

---

>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 62.0 bits (149), Expect(2) = 1e-13
 Identities = 45/126 (35%), Positives = 67/126 (53%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           + +D+A+ RPGRF K   V LP    R  ILK H +K TL+++VD   IAR      L+G
Sbjct: 427 EALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTP--GLSG 484

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKH 435
           A+LA+LVN+AA+ A ++         +++S D++      HFE A  K+      +    
Sbjct: 485 AELANLVNQAAVYACQK---------NAVSVDMS------HFEWAKDKILMGAERKTMVL 529

Query: 436 FDALSK 453
            DA  K
Sbjct: 530 TDAARK 535



 Score = 33.5 bits (75), Expect(2) = 1e-13
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVELDG  Q  G+ +IGATN
Sbjct: 403 QLLVELDGFSQTSGIIIIGATN 424

---

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 68.9 bits (167), Expect(2) = 1e-13
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A++RPGRF ++  V  P    R  IL  H   KTLS+DVDL+ IARR      TG
Sbjct: 310 DVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTP--GFTG 367

Query: 256 ADLASLVNEAAMAA 297
           ADL++L+NEAA+ A
Sbjct: 368 ADLSNLLNEAAILA 381



 Score = 26.6 bits (57), Expect(2) = 1e-13
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +   G+ ++ ATN
Sbjct: 286 QLLTEMDGFEGNTGIIIVAATN 307

---

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 68.6 bits (166), Expect(2) = 2e-13
 Identities = 38/88 (43%), Positives = 55/88 (62%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPG+F ++  V  P    RV IL+ H+  K L++DVD + IARR      TG
Sbjct: 379 DVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTP--GFTG 436

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSS 339
           ADL +L+NEAA+ A     + ++K + S
Sbjct: 437 ADLQNLMNEAAILAARRDLKEISKDEIS 464



 Score = 26.6 bits (57), Expect(2) = 2e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV V+ ATN
Sbjct: 355 QLLTEMDGFSGNSGVIVLAATN 376

---

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 66.2 bits (160), Expect(2) = 2e-13
 Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   VPLP  + R+ ILK HT +  L + VDL  IA   E    +G
Sbjct: 290 DILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTE--GASG 346

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD--LTNKIKL 372
           ADL ++  EA M A+ ER  ++ + D   + D  L N+ KL
Sbjct: 347 ADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKL 387



 Score = 28.9 bits (63), Expect(2) = 2e-13
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D R  V VI ATN
Sbjct: 266 QLLAEMDGFDPRGNVKVIAATN 287

---

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 66.2 bits (160), Expect(2) = 2e-13
 Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   VPLP  + R+ ILK HT +  L ++VDL  IA  E     +G
Sbjct: 290 DILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIA--EITEGASG 346

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD--LTNKIKL 372
           ADL ++  EA M A+ ER  ++ + D   + D  L N+ KL
Sbjct: 347 ADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKL 387



 Score = 28.9 bits (63), Expect(2) = 2e-13
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D R  V VI ATN
Sbjct: 266 QLLAEMDGFDPRGNVKVIAATN 287

---

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 65.5 bits (158), Expect(2) = 2e-13
 Identities = 39/74 (52%), Positives = 47/74 (63%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V LP    R  ILK H  K  LS+DVD   IAR       +G
Sbjct: 301 DVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTP--GFSG 358

Query: 256 ADLASLVNEAAMAA 297
           ADLA+LVNEAA+ A
Sbjct: 359 ADLANLVNEAALFA 372



 Score = 29.3 bits (64), Expect(2) = 2e-13
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG D   G+ +I ATN
Sbjct: 277 QMLVEMDGFDGNEGIILIAATN 298

---

>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1000

 Score = 66.6 bits (161), Expect(2) = 3e-13
 Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 21/151 (13%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVA-ILKAHTEKKTLSEDVDLETIARREECN-NL 249
            D++DEA+LRPGRF K  ++ +   D++ A I+KA T K TL   +D+  IA++  C  N 
Sbjct: 851  DLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILDIAKK--CPFNY 908

Query: 250  TGADLASLVNEAAMAALE----------ERCEFLAKGDSSM---------STDLTNKIKL 372
            TGAD  +L ++A + A+           E+     K + S+           DL   +KL
Sbjct: 909  TGADFYALCSDALLNAMTRVAGEVDEKWEKYNMENKKNISLRYWFDNVANENDLKVVVKL 968

Query: 373  QHFEHALSKVKPSVSEQQRKHFDALSKKYSA 465
            Q FE A   + PSVSE + +H+  L   + +
Sbjct: 969  QDFELAQQNLIPSVSEDELRHYLRLKSSFES 999



 Score = 27.7 bits (60), Expect(2) = 3e-13
 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +3

Query: 3   QLLVELDGADQR-HGVYVIGATN 68
           QLL ELDG      GV+VIGATN
Sbjct: 826 QLLAELDGMSSGGDGVFVIGATN 848

---

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 64.7 bits (156), Expect(2) = 3e-13
 Identities = 33/77 (42%), Positives = 52/77 (67%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF ++  V  P    R A+L+ H++ K +++D DL+ +A+R     +TG
Sbjct: 312 DILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTV--GMTG 369

Query: 256 ADLASLVNEAAMAALEE 306
           ADLA++VNEAA+    E
Sbjct: 370 ADLANVVNEAALLTARE 386



 Score = 29.6 bits (65), Expect(2) = 3e-13
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG   R GV +I ATN
Sbjct: 288 QLLVEMDGFGDRAGVILIAATN 309

---

>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 65.5 bits (158), Expect(2) = 3e-13
 Identities = 37/92 (40%), Positives = 54/92 (58%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF ++  V  P    R A+LK H   K L E V+L++IA R      +G
Sbjct: 310 DILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTP--GFSG 367

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADL +L+NEAA+ A  +  + +   D   +TD
Sbjct: 368 ADLENLLNEAALVAARQNKKKIDARDIDEATD 399



 Score = 28.9 bits (63), Expect(2) = 3e-13
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG     G+ +I ATN
Sbjct: 286 QLLVEMDGFSANEGIIIIAATN 307

---

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 67.0 bits (162), Expect(2) = 3e-13
 Identities = 37/92 (40%), Positives = 54/92 (58%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   VPLP  D R  ILK HT    L+E+VD+E +AR  +    +G
Sbjct: 301 DILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITD--GASG 358

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADL ++  EA M A+ +  + +   D   + D
Sbjct: 359 ADLKAICTEAGMFAIRDERDEVTMADFMDAVD 390



 Score = 27.3 bits (59), Expect(2) = 3e-13
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG + R  V ++ ATN
Sbjct: 277 QLLAELDGFESRGNVGIVAATN 298

---

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 65.9 bits (159), Expect(2) = 1e-11
 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  V +P    R+ IL+ HT+   L++DVDLE IA   E +   G+D
Sbjct: 373 IDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIA--AETHGYVGSD 430

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--IKLQHFEHALSKVKPS 411
           LASL +EAAM  + E+ + +   +  +  ++ +   + + +F  AL    PS
Sbjct: 431 LASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPS 482



 Score = 62.4 bits (150), Expect(2) = 4e-13
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D ID A++RPGR  +  +VPLP  + R +IL+       ++EDVDL  +A+    +  +G
Sbjct: 646  DQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAK--ATHGFSG 703

Query: 256  ADLASLVNEAAMAALEERCEFLAK----------GDSSMSTDLT-NKIKLQHFEHALSKV 402
            ADL  +V  A   A+++  E   K           D  M  D + ++++  H E A+   
Sbjct: 704  ADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMA 763

Query: 403  KPSVSEQQRKHFDA 444
            + SVS+ + + ++A
Sbjct: 764  RRSVSDAEVRRYEA 777



 Score = 31.6 bits (70), Expect(2) = 4e-13
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG + +  V+VIGATN
Sbjct: 622 QLLTEMDGVNSKKNVFVIGATN 643



 Score = 23.1 bits (48), Expect(2) = 1e-11
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V V+ ATN
Sbjct: 347 QLLTLMDGMKARSNVVVMAATN 368

---

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 67.4 bits (163), Expect(2) = 4e-13
 Identities = 37/86 (43%), Positives = 53/86 (61%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V  P    RV IL+ H+  K L++DVD + IARR      TG
Sbjct: 402 DVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTP--GFTG 459

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
            DL +L+NEAA+ A     + ++K +
Sbjct: 460 VDLQNLMNEAAILAARRDLKEISKDE 485



 Score = 26.6 bits (57), Expect(2) = 4e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV V+ ATN
Sbjct: 378 QLLTEMDGFSGNSGVIVLAATN 399

---

>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 67.4 bits (163), Expect(2) = 4e-13
 Identities = 43/124 (34%), Positives = 67/124 (54%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A++RPGRF    +VP P  + R  IL+ HT   TL +DVDL  IA  EE +  TGA+
Sbjct: 439 IDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIA--EETDLFTGAE 496

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKHFD 441
           L  L  E+   +L E         +  +T + N+    HF+ A S +KP+++ ++ + + 
Sbjct: 497 LEGLCRESGTVSLRE---------NIAATAVFNR----HFQTAKSSLKPALTIEEVETYS 543

Query: 442 ALSK 453
           +  K
Sbjct: 544 SFRK 547



 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 43/115 (37%), Positives = 60/115 (52%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D ID A+ R GRF     V  P  ++R+ IL+ +T+K  L   VDL+ IA    CN   
Sbjct: 174 VDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIA--ISCNGYV 231

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS 417
           GADL +L  EA ++A +          SS S  LT+    Q F+ A S V PS++
Sbjct: 232 GADLEALCREATISASKR---------SSDSLILTS----QDFKIAKSVVGPSIN 273



 Score = 26.6 bits (57), Expect(2) = 4e-13
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL E+DG ++  G+ V+ ATN
Sbjct: 414 LLTEMDGLEEAKGILVLAATN 434

---

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score = 67.8 bits (164), Expect(2) = 1e-12
 Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  + +P    R+ +L+ HT+   L+EDVDLE +++  + +   GAD
Sbjct: 357 IDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSK--DTHGYVGAD 414

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKL--QHFEHALSKVKPS 411
           LA+L  EAA+  + E+ + +   D  +  ++ N + +   HF+ AL    PS
Sbjct: 415 LAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPS 466



 Score = 63.9 bits (154), Expect(2) = 5e-13
 Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  +  ++PLP  + R  I K+   K  +++DVDL  +A+  +    +G
Sbjct: 631  DIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQ--GFSG 688

Query: 256  ADLASLVNEAAMAALEERCE-------FLAKGDSSMSTDLTN--KIKLQHFEHALSKVKP 408
            AD+  +   +   A+ E  E         A+   +M  D     +IK  HFE ++   + 
Sbjct: 689  ADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYARR 748

Query: 409  SVSEQQRKHFDALSK 453
            SVS+   + + A ++
Sbjct: 749  SVSDADIRKYQAFAQ 763



 Score = 29.6 bits (65), Expect(2) = 5e-13
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG + +  V++IGATN
Sbjct: 607 QLLTEMDGMNAKKTVFIIGATN 628



 Score = 24.6 bits (52), Expect(2) = 1e-12
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG   R  V V+GATN
Sbjct: 331 QLLTLMDGLKSRAHVIVMGATN 352

---

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 64.7 bits (156), Expect(2) = 5e-13
 Identities = 38/92 (41%), Positives = 53/92 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   VPLP    R+ ILK HT K  L + VDL  IA  E     +G
Sbjct: 288 DILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIA--EITEGASG 344

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADL ++  EA M A+ +R  ++ + D   + D
Sbjct: 345 ADLKAIATEAGMFAIRDRRTYVTQDDFLKAVD 376



 Score = 28.9 bits (63), Expect(2) = 5e-13
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D R  V VI ATN
Sbjct: 264 QLLAEMDGFDPRGNVKVIAATN 285

---

>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 63.9 bits (154), Expect(2) = 7e-13
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++ FV LP    R  I++ H +K  L  +VD   IAR       +G
Sbjct: 301 DVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTP--GFSG 358

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADLA+LVNEAA+ A     + +   D   + D
Sbjct: 359 ADLANLVNEAALFAARNNRDVVMMSDFESAKD 390



 Score = 29.3 bits (64), Expect(2) = 7e-13
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG D   G+ +I ATN
Sbjct: 277 QMLVEMDGFDGNEGIILIAATN 298

---

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 67.4 bits (163), Expect(2) = 7e-13
 Identities = 35/92 (38%), Positives = 53/92 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   +PLP  + R  I K HT    L+EDVDL+ +A+  E    +G
Sbjct: 329 DILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITE--GASG 386

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           AD+ ++  EA M A+ E  + +   D   + D
Sbjct: 387 ADIKAICTEAGMMAIREDRDIVTMDDFLKAVD 418



 Score = 25.8 bits (55), Expect(2) = 7e-13
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D    + VI ATN
Sbjct: 305 QLLAEMDGFDPLDDIKVIAATN 326

---

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 63.2 bits (152), Expect(2) = 9e-13
 Identities = 32/77 (41%), Positives = 51/77 (66%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF ++  V  P    R A+L+ H++ K ++ D DL+ +A+R     +TG
Sbjct: 312 DILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTV--GMTG 369

Query: 256 ADLASLVNEAAMAALEE 306
           ADLA+++NEAA+    E
Sbjct: 370 ADLANVINEAALLTARE 386



 Score = 29.6 bits (65), Expect(2) = 9e-13
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG   R GV +I ATN
Sbjct: 288 QLLVEMDGFGDRAGVILIAATN 309

---

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 63.2 bits (152), Expect(2) = 9e-13
 Identities = 32/77 (41%), Positives = 51/77 (66%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF ++  V  P    R A+L+ H++ K ++ D DL+ +A+R     +TG
Sbjct: 312 DILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTV--GMTG 369

Query: 256 ADLASLVNEAAMAALEE 306
           ADLA+++NEAA+    E
Sbjct: 370 ADLANVINEAALLTARE 386



 Score = 29.6 bits (65), Expect(2) = 9e-13
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG   R GV +I ATN
Sbjct: 288 QLLVEMDGFGDRAGVILIAATN 309

---

>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 65.1 bits (157), Expect(2) = 9e-13
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V  P    R  IL  H + K L E+V L  IARR      TG
Sbjct: 360 DVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTP--GFTG 417

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADLA+++NEAA+     R E +   + + + D
Sbjct: 418 ADLANVLNEAAIFTARRRKEAITMAEVNDAID 449



 Score = 27.7 bits (60), Expect(2) = 9e-13
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +   G+ VI ATN
Sbjct: 336 QLLTEMDGFEGNSGIIVIAATN 357

---

>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 63.9 bits (154), Expect(2) = 9e-13
 Identities = 38/92 (41%), Positives = 53/92 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   VPLP  + R+ ILK HT +  L   VDL  IA   E    +G
Sbjct: 287 DILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTE--GASG 343

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADL ++  EA M A+ ER  ++ + D   + D
Sbjct: 344 ADLKAIATEAGMFAIRERRTYVTQEDFLKAID 375



 Score = 28.9 bits (63), Expect(2) = 9e-13
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D R  V VI ATN
Sbjct: 263 QLLAEMDGFDPRGNVKVIAATN 284

---

>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 62.0 bits (149), Expect(2) = 1e-12
 Identities = 32/82 (39%), Positives = 53/82 (64%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF +   V LP   ER  ILK H++ K LS+++  + IA+R      +G
Sbjct: 361 DVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTP--GYSG 418

Query: 256 ADLASLVNEAAMAALEERCEFL 321
           A L +++NEA++ ++ E+ + +
Sbjct: 419 AQLENVINEASLLSVREKTDVI 440



 Score = 30.4 bits (67), Expect(2) = 1e-12
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG ++  G+ ++GATN
Sbjct: 337 QILVEMDGINENAGILIMGATN 358

---

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 63.5 bits (153), Expect(2) = 1e-12
 Identities = 42/109 (38%), Positives = 58/109 (53%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V LP    R  ILK H  +  L+ D+D   IAR       +G
Sbjct: 301 DVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTP--GFSG 358

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           ADLA+LVNEAA+        F A+G+  +       + +  FE A  K+
Sbjct: 359 ADLANLVNEAAL--------FAARGNKRV-------VSMVEFEKAKDKI 392



 Score = 28.9 bits (63), Expect(2) = 1e-12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG +   G+ VI ATN
Sbjct: 277 QMLVEMDGFEGNEGIIVIAATN 298

---

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 63.5 bits (153), Expect(2) = 1e-12
 Identities = 42/109 (38%), Positives = 58/109 (53%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V LP    R  ILK H  +  L+ D+D   IAR       +G
Sbjct: 301 DVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTP--GFSG 358

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           ADLA+LVNEAA+        F A+G+  +       + +  FE A  K+
Sbjct: 359 ADLANLVNEAAL--------FAARGNKRV-------VSMVEFEKAKDKI 392



 Score = 28.9 bits (63), Expect(2) = 1e-12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG +   G+ VI ATN
Sbjct: 277 QMLVEMDGFEGNEGIIVIAATN 298

---

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 63.5 bits (153), Expect(2) = 1e-12
 Identities = 42/109 (38%), Positives = 58/109 (53%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V LP    R  ILK H  +  L+ D+D   IAR       +G
Sbjct: 301 DVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTP--GFSG 358

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           ADLA+LVNEAA+        F A+G+  +       + +  FE A  K+
Sbjct: 359 ADLANLVNEAAL--------FAARGNKRV-------VSMVEFEKAKDKI 392



 Score = 28.9 bits (63), Expect(2) = 1e-12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG +   G+ VI ATN
Sbjct: 277 QMLVEMDGFEGNEGIIVIAATN 298

---

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 63.5 bits (153), Expect(2) = 1e-12
 Identities = 42/109 (38%), Positives = 58/109 (53%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V LP    R  ILK H  +  L+ D+D   IAR       +G
Sbjct: 301 DVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTP--GFSG 358

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           ADLA+LVNEAA+        F A+G+  +       + +  FE A  K+
Sbjct: 359 ADLANLVNEAAL--------FAARGNKRV-------VSMVEFEKAKDKI 392



 Score = 28.9 bits (63), Expect(2) = 1e-12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG +   G+ VI ATN
Sbjct: 277 QMLVEMDGFEGNEGIIVIAATN 298

---

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 63.5 bits (153), Expect(2) = 1e-12
 Identities = 42/109 (38%), Positives = 58/109 (53%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V LP    R  ILK H  +  L+ D+D   IAR       +G
Sbjct: 301 DVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTP--GFSG 358

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           ADLA+LVNEAA+        F A+G+  +       + +  FE A  K+
Sbjct: 359 ADLANLVNEAAL--------FAARGNKRV-------VSMVEFEKAKDKI 392



 Score = 28.9 bits (63), Expect(2) = 1e-12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG +   G+ VI ATN
Sbjct: 277 QMLVEMDGFEGNEGIIVIAATN 298

---

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 64.3 bits (155), Expect(2) = 1e-12
 Identities = 36/74 (48%), Positives = 48/74 (64%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+ RPGRF ++  V LP    R  ILK H  K ++++DVD  T+AR       +G
Sbjct: 300 DVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTP--GYSG 357

Query: 256 ADLASLVNEAAMAA 297
           ADLA+LVNEAA+ A
Sbjct: 358 ADLANLVNEAALFA 371



 Score = 28.1 bits (61), Expect(2) = 1e-12
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG     GV VI ATN
Sbjct: 276 QMLVEMDGFSGNDGVIVIAATN 297

---

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 65.1 bits (157), Expect(2) = 1e-12
 Identities = 38/87 (43%), Positives = 50/87 (57%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D+ID AVLRPGRF +   VPLP    R+ IL  HT K  ++ DVDLE IA+  E    +
Sbjct: 288 LDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTE--GFS 345

Query: 253 GADLASLVNEAAMAALEERCEFLAKGD 333
           GADL ++V EA   A+      +   D
Sbjct: 346 GADLKAVVVEAGYNAIRRGSRVITMDD 372



 Score = 27.3 bits (59), Expect(2) = 1e-12
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG D    V VI ATN
Sbjct: 265 QLLAELDGFDPLDNVKVIAATN 286

---

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 64.3 bits (155), Expect(2) = 1e-12
 Identities = 36/74 (48%), Positives = 48/74 (64%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+ RPGRF ++  V LP    R  ILK H  K ++++DVD  T+AR       +G
Sbjct: 46  DVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTP--GYSG 103

Query: 256 ADLASLVNEAAMAA 297
           ADLA+LVNEAA+ A
Sbjct: 104 ADLANLVNEAALFA 117



 Score = 28.1 bits (61), Expect(2) = 1e-12
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3  QLLVELDGADQRHGVYVIGATN 68
          Q+LVE+DG     GV VI ATN
Sbjct: 22 QMLVEMDGFSGNDGVIVIAATN 43

---

>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 63.5 bits (153), Expect(2) = 2e-12
 Identities = 32/78 (41%), Positives = 48/78 (61%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +DV+D+A+LRPGRF +   + LP   ER  ILK H E K LS  + L  +A+R      +
Sbjct: 379 LDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTP--GFS 436

Query: 253 GADLASLVNEAAMAALEE 306
           GA L +++NEA + A+ +
Sbjct: 437 GAQLENVINEATLLAVRD 454



 Score = 28.1 bits (61), Expect(2) = 2e-12
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG   R GV V+ ATN
Sbjct: 356 QLLAEMDGFTSRTGVVVMAATN 377

---

>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 64.7 bits (156), Expect(2) = 2e-12
 Identities = 36/101 (35%), Positives = 55/101 (54%)
 Frame = +1

Query: 49  MLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIAR 228
           +++     +DV+D A+LRPGRF ++  V +P    R+ IL  H   K L   + LE IA+
Sbjct: 313 IIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAK 372

Query: 229 REECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           R      +GADLA+L+NEAA+     R + +   +   S D
Sbjct: 373 RTP--GFSGADLANLLNEAAILTARRRKKQITISEIDASID 411



 Score = 26.9 bits (58), Expect(2) = 2e-12
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +   G+ +I ATN
Sbjct: 298 QLLTEMDGFEGNTGIIIIAATN 319

---

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 62.8 bits (151), Expect(2) = 3e-12
 Identities = 36/84 (42%), Positives = 52/84 (61%)
 Frame = +1

Query: 49  MLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIAR 228
           +LL      DV+D A+LRPGRF ++  V  P    R AIL+ H +   L+ +VDL+ +AR
Sbjct: 280 ILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVAR 339

Query: 229 REECNNLTGADLASLVNEAAMAAL 300
                  +GADLA++VNEAA+ A+
Sbjct: 340 --ITGGYSGADLANVVNEAALLAV 361



 Score = 28.1 bits (61), Expect(2) = 3e-12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG D   G+ ++ ATN
Sbjct: 265 QLLVEMDGFDNTTGLILLAATN 286

---

>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 64.3 bits (155), Expect(2) = 4e-12
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHT-EKKTLSEDVDLETIARREECNNL 249
           +D ID A+ RPGRF ++    LP  + R  ILK HT +      D+ LE +A  E C   
Sbjct: 232 LDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELA--EHCVGY 289

Query: 250 TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTN-KIKLQHFEHALSKVKPSVSEQQ 426
            GAD+ S+  EAA+ AL  R   +      +  DL++  I  + FE AL K++P+     
Sbjct: 290 CGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSITISAKDFEAALQKIRPASQRAV 349

Query: 427 RKHFDALS 450
                ALS
Sbjct: 350 TSPGQALS 357



 Score = 26.2 bits (56), Expect(2) = 4e-12
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL  +DG D R  + VIGATN
Sbjct: 210 LLALMDGLDSRGEIVVIGATN 230

---

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 63.2 bits (152), Expect(2) = 6e-12
 Identities = 33/78 (42%), Positives = 48/78 (61%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A++RPGRF ++  V  P    R  IL+ H   K L+ +V +++IARR      +G
Sbjct: 321 DVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTP--GFSG 378

Query: 256 ADLASLVNEAAMAALEER 309
           ADLA+L+NEAA+     R
Sbjct: 379 ADLANLLNEAAILTARRR 396



 Score = 26.9 bits (58), Expect(2) = 6e-12
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +   G+ +I ATN
Sbjct: 297 QLLTEMDGFEGNTGIIIIAATN 318

---

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 60.5 bits (145), Expect(2) = 7e-12
 Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKT----LSEDVDLETIARREECN 243
           D+IDEA+LRPGR      + LP    R+ ILK HT +      L  DVD+E +A   +  
Sbjct: 428 DMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTK-- 485

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTN-KIKLQHFEHALSKVKPS--V 414
           N +GA++A L+  A+  A     +      +++S +L N K+    F +ALS+V+P+  V
Sbjct: 486 NFSGAEIAGLIKSASSFAFYRHIK--VGTTAAVSGNLENIKVNRNDFLNALSEVRPAYGV 543

Query: 415 SEQQ 426
           SE++
Sbjct: 544 SEEE 547



 Score = 29.3 bits (64), Expect(2) = 7e-12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG DQ + + VIG TN
Sbjct: 404 QLLAKMDGVDQLNNILVIGMTN 425

---

>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1198

 Score = 64.3 bits (155), Expect(2) = 9e-12
 Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 25/146 (17%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVA-ILKAHTEKKTLSEDVDLETIARREECN-NL 249
            D++DEA+LRPGRF K  ++ +   DE+ + IL+A T K  L+++VDL  IA+R  C+   
Sbjct: 992  DLLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIAKR--CSFTF 1049

Query: 250  TGADLASLVNEAAMAALEERC------------EFLAKGDSSMST-----------DLTN 360
            TGAD  +L +++ + A+                E  ++G   +ST           D+  
Sbjct: 1050 TGADFYALCSDSMLNAMTRTANEVDAKIKKLNEELTSQGKEEISTRWWFDNAATPEDIDV 1109

Query: 361  KIKLQHFEHALSKVKPSVSEQQRKHF 438
             ++++ F+ A S++ PSVS ++ +H+
Sbjct: 1110 LVQMEDFKKAQSELAPSVSAEELEHY 1135



 Score = 25.0 bits (53), Expect(2) = 9e-12
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 5/27 (18%)
 Frame = +3

Query: 3    QLLVELDGADQR-----HGVYVIGATN 68
            QLL ELDG          GV+V+GATN
Sbjct: 963  QLLAELDGMSGGAEGGGDGVFVVGATN 989

---

>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 60.8 bits (146), Expect(2) = 1e-11
 Identities = 32/93 (34%), Positives = 52/93 (55%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +DV+D+A+LRPGRF +   + LP   ER  IL+ H + K LS  + L  +A+R      +
Sbjct: 376 LDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTP--GFS 433

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           GA L +++NEA + A+ +    +   D   + D
Sbjct: 434 GAQLENVINEATLLAVRDNRTTINMNDIDEAID 466



 Score = 28.1 bits (61), Expect(2) = 1e-11
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG   R GV V+ ATN
Sbjct: 353 QLLAEMDGFTSRTGVVVMAATN 374

---

>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS8)
          Length = 1030

 Score = 60.1 bits (144), Expect(2) = 2e-11
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 22/150 (14%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGAD-ERVAILKAHTEKKTLSEDVDLETIARREECN-NL 249
            D++DEA+LRPGRF K  ++ +P  D +++ IL+A T K  L  DV L  +A+   C  N 
Sbjct: 881  DLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKL--CPFNY 938

Query: 250  TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK--------------------IK 369
            TGAD  +L ++A + A+      + K   S   +LT +                    +K
Sbjct: 939  TGADFYALCSDAMLNAMSRIARMVEK-KVSQHNELTGENISTRRWFDKIATKEDTKVVVK 997

Query: 370  LQHFEHALSKVKPSVSEQQRKHFDALSKKY 459
            ++ F  A  ++ PSVS  +  H++A+   +
Sbjct: 998  MEDFLKAQEQLTPSVSRAELNHYEAVRANF 1027



 Score = 28.5 bits (62), Expect(2) = 2e-11
 Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 3   QLLVELDG-ADQRHGVYVIGATN 68
           QLL ELDG +    GV+VIGATN
Sbjct: 856 QLLAELDGMSTDADGVFVIGATN 878

---

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 60.5 bits (145), Expect(2) = 3e-11
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D++D+A+ RPGR  K  ++ LP    R +I KA  +   L+EDVD+  +A+R E    +G
Sbjct: 1082 DILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTE--GFSG 1139

Query: 256  ADLASLVNEAAMAALEERCEFL-----------AKGDSSMSTDLTN------KIKLQHFE 384
            AD+ +L   A   A++E    L            K  +S   D T+       +  +HF+
Sbjct: 1140 ADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTYDPVPTLSKKHFD 1199

Query: 385  HALSKVKPSVSEQQRKHFDALSKKYS 462
             A    + S+  +    ++   +K S
Sbjct: 1200 LAFKNARISIQPEDVLKYEKFKEKLS 1225



 Score = 58.2 bits (139), Expect(2) = 2e-09
 Identities = 34/80 (42%), Positives = 46/80 (57%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           ID A+ R GRF ++  +P+P    R  IL   T+K  L  DV+L  IA+  EC+   GAD
Sbjct: 676 IDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAK--ECHGYVGAD 733

Query: 262 LASLVNEAAMAALEERCEFL 321
           LA L  EAA+  ++E   FL
Sbjct: 734 LAQLCFEAAIQCIKEHIHFL 753



 Score = 27.3 bits (59), Expect(2) = 3e-11
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +3

Query: 3    QLLVELDGADQRHGVYVIGATN 68
            Q+L E+DG +++  +++I ATN
Sbjct: 1058 QILTEIDGINEKKTIFIIAATN 1079



 Score = 23.1 bits (48), Expect(2) = 2e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL  +DG  + + V V+ ATN
Sbjct: 650 QLLTLMDGLKKNNNVLVLAATN 671

---

>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 61.2 bits (147), Expect(2) = 3e-11
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHT-EKKTLSEDVDLETIARREECNNL 249
           +D ID A+ RPGRF ++    LP  + R  ILK HT +      D  LE +A  E C   
Sbjct: 408 LDAIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELA--ENCVGY 465

Query: 250 TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTN-KIKLQHFEHALSKVKPSVSEQQ 426
            GAD+ S+  EAA+ AL  R   +      +  DL++  I  + FE A+ K+ P+     
Sbjct: 466 RGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQRAV 525

Query: 427 RKHFDALS 450
                ALS
Sbjct: 526 TSPGQALS 533



 Score = 26.2 bits (56), Expect(2) = 3e-11
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL  +DG D R  + VIGATN
Sbjct: 386 LLALMDGLDSRGEIVVIGATN 406

---

>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAY4)
          Length = 1024

 Score = 59.7 bits (143), Expect(2) = 4e-11
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 25/153 (16%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADER-VAILKAHTEKKTLSEDVDLETIARREECN-NL 249
            D++DEA+LRPGRF K  ++ +    E+   I++A T K  L+ DV LE I++R  C    
Sbjct: 869  DLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKR--CPFTF 926

Query: 250  TGADLASLVNEAAMAAL-------EERCEFLAK-----GDSSMS-----------TDLTN 360
            TGAD  +L ++A + A+       + + + L K     G+  +S           +D+  
Sbjct: 927  TGADFYALCSDAMLNAMTRTANEVDAKIKLLNKNREEAGEEPVSIRWWFDHEATKSDIEV 986

Query: 361  KIKLQHFEHALSKVKPSVSEQQRKHFDALSKKY 459
            ++  Q FE A  ++ PSVS ++ +H+  L +++
Sbjct: 987  EVAQQDFEKAKDELSPSVSAEELQHYLKLRQQF 1019



 Score = 27.3 bits (59), Expect(2) = 4e-11
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +3

Query: 3   QLLVELDGADQR--HGVYVIGATN 68
           QLL ELDG       GV+V+GATN
Sbjct: 843 QLLAELDGMSTAGGEGVFVVGATN 866

---

>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score = 62.0 bits (149), Expect(2) = 5e-11
 Identities = 35/101 (34%), Positives = 56/101 (55%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I+ +D A++RPGR  +K     P    +  IL  HT K  LSEDV+LET+   ++  +L+
Sbjct: 331 IETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKD--DLS 388

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQ 375
           GAD+ ++  EA + AL ER   +   D   + +   K K++
Sbjct: 389 GADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVE 429



 Score = 25.0 bits (53), Expect(2) = 5e-11
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D R  V VI ATN
Sbjct: 308 ELLNQLDGFDDRGDVKVIMATN 329

---

>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 65.9 bits (159), Expect(2) = 5e-11
 Identities = 35/91 (38%), Positives = 54/91 (59%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P A+ R  IL+ H+    L+  +DL++IA  E+ N  +
Sbjct: 295 IDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIA--EKMNGAS 352

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA+L  +  EA M AL ER   + + D  ++
Sbjct: 353 GAELKGVCTEAGMFALRERRVHVTQEDFELA 383



 Score = 21.2 bits (43), Expect(2) = 5e-11
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 272 ELLNQLDGFEATKNIKVIMATN 293

---

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 60.5 bits (145), Expect(2) = 6e-11
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHT-EKKTLSEDVDLETIARREECNNL 249
           +D ID A+ RPGRF ++    LP  + R  ILK HT +      D  LE +A  E C   
Sbjct: 577 LDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELA--ENCVGY 634

Query: 250 TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTN-KIKLQHFEHALSKVKPSVSEQQ 426
            GAD+ S+  EAA+ AL  R   +      +  DL++  I  + FE A+ K+ P+     
Sbjct: 635 CGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQRAV 694

Query: 427 RKHFDALS 450
                ALS
Sbjct: 695 TSPGQALS 702



 Score = 26.2 bits (56), Expect(2) = 6e-11
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL  +DG D R  + VIGATN
Sbjct: 555 LLALMDGLDSRGEIVVIGATN 575

---

>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein|
           homolog 10) (Fragment)
          Length = 389

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 43/117 (36%), Positives = 64/117 (54%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P PG   R+ ILK H+ K  L+  ++L+ I+  ++ N  +
Sbjct: 281 IDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKIS--DKMNGAS 338

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQ 423
           GA+L ++  EA M AL ER   +++ D               FE A+SKV    SEQ
Sbjct: 339 GAELKAVCTEAGMYALRERRVHVSQED---------------FEMAVSKVMKKDSEQ 380

---

>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score = 57.8 bits (138), Expect(2) = 1e-10
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  K     +P  D+R+ IL++ T    +S+ V+L ++A   EC+  +G
Sbjct: 946  DLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVA--GECSGFSG 1003

Query: 256  ADLASLVNEAAMAALEER 309
            ADL +L   A + A+ E+
Sbjct: 1004 ADLQALAYNAYLKAVHEK 1021



 Score = 28.1 bits (61), Expect(2) = 1e-10
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+L ++DGA+   GVYV+ AT+
Sbjct: 922 QMLTQMDGAEGLDGVYVLAATS 943

---

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 36/92 (39%), Positives = 51/92 (55%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF +K  V  P    R A+LK H + K L+ DVDL  +A   +     G
Sbjct: 343 DVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVA--TQTPGYVG 400

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           ADL +++NEAA+ A  +  + +   D     D
Sbjct: 401 ADLENVLNEAALVAARQNKKEINAADIDEGMD 432

---

>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 824

 Score = 58.5 bits (140), Expect(2) = 1e-10
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHT----EKKTLSEDVDLETIARREECN 243
           D+IDEA+LRPGR   +  V LP    R+ ILK HT    E   +  +VDLE I++R +  
Sbjct: 454 DMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTK-- 511

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQ--HFEHAL-SKVKPS 411
           N +GA+L  LV  A  +A+    +  A G +    D   K+ +    F++AL + +KP+
Sbjct: 512 NFSGAELEGLVRAAQSSAMNRLVK--AGGKAQADPDAIEKLAINSGDFDYALENDIKPA 568



 Score = 26.9 bits (58), Expect(2) = 1e-10
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG +Q + + VIG TN
Sbjct: 430 QLLSKMDGVEQLNNILVIGMTN 451

---

>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive|
           fusion protein 2) (NEM-sensitive fusion protein 2)
           (dNsf-2)
          Length = 752

 Score = 57.4 bits (137), Expect(2) = 2e-10
 Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK----KTLSEDVDLETIARREECN 243
           D+IDEA+LRPGR   +  + LP    RV IL  HT++      ++ DVD   IA + +  
Sbjct: 382 DMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTK-- 439

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQ----HFEHAL-SKVKP 408
           N +GA+L  LV  A   A+      L K DS +  D     KL+     F HAL + +KP
Sbjct: 440 NFSGAELEGLVRAAQSTAMNR----LIKADSKVHVDPEAMEKLRVTRADFLHALDNDIKP 495

Query: 409 SVSEQQ 426
           +    Q
Sbjct: 496 AFGAAQ 501



 Score = 27.7 bits (60), Expect(2) = 2e-10
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG +Q + + VIG TN
Sbjct: 358 QLLAKIDGVEQLNNILVIGMTN 379

---

>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive|
           fusion protein 1) (NEM-sensitive fusion protein 1)
           (dNsf-1) (Protein comatose)
          Length = 745

 Score = 55.8 bits (133), Expect(2) = 2e-10
 Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK----KTLSEDVDLETIARREECN 243
           D+IDEA+LRPGR   +  + LP    RV IL  HT++      +++DVD + IA   +  
Sbjct: 377 DMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTK-- 434

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTD--LTNKIKLQH--FEHALS-KVKP 408
           N +GA+L  LV  A  +A+      L K D+ ++ D     K+K+    F H+L   +KP
Sbjct: 435 NFSGAELEGLVRAAQSSAMNR----LIKADAKVTVDPEAMEKLKVNRDDFLHSLEHDIKP 490

Query: 409 SVSEQQ 426
           +    Q
Sbjct: 491 AFGTAQ 496



 Score = 29.3 bits (64), Expect(2) = 2e-10
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG DQ + + VIG TN
Sbjct: 353 QLLTKIDGVDQLNNILVIGMTN 374

---

>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score = 60.5 bits (145), Expect(2) = 2e-10
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I+ +D A+LRPGR  +K   PLP    R  I + HT K TL++DV+LE     ++    +
Sbjct: 342 IESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKD--EFS 399

Query: 253 GADLASLVNEAAMAALEER 309
           GAD+ ++  EA + AL ER
Sbjct: 400 GADIKAICTEAGLLALRER 418



 Score = 24.6 bits (52), Expect(2) = 2e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D R  V VI ATN
Sbjct: 319 ELLNQLDGFDSRGDVKVILATN 340

---

>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 54.3 bits (129), Expect(2) = 2e-10
 Identities = 29/74 (39%), Positives = 47/74 (63%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           +V+D+A+LRPGRF  +  V  P  + R+A+L  + +K     ++D+E +A        TG
Sbjct: 313 EVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTV--GYTG 370

Query: 256 ADLASLVNEAAMAA 297
           AD+ +LVN+AA+AA
Sbjct: 371 ADIQNLVNQAAIAA 384



 Score = 30.4 bits (67), Expect(2) = 2e-10
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG   + G+ V+GATN
Sbjct: 289 QLLAEMDGFQSKEGIIVLGATN 310

---

>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 948

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 42/148 (28%), Positives = 84/148 (56%), Gaps = 19/148 (12%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADE-RVAILKAHTEKKTLSEDVDLETIARREECN-NL 249
            D++D ++LRPGRF K  ++ +  ++E + ++L+A T+   L E +DL  IA+   C+ N 
Sbjct: 805  DLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAK--NCHPNF 862

Query: 250  TGADLASLVNEAAMAALEERC-----------------EFLAKGDSSMSTDLTNKIKLQH 378
            TGAD+ +L ++A ++A++ +                  EF  + ++  S +L  +I  + 
Sbjct: 863  TGADMYALCSDAVLSAIKRKTNEIDLLIQASGTDLSTEEFFKRNENQDSLEL--RITKED 920

Query: 379  FEHALSKVKPSVSEQQRKHFDALSKKYS 462
            F  +L K++PS+SEQ+   ++ +  ++S
Sbjct: 921  FLTSLKKLRPSISEQELHRYEMVRHQFS 948

---

>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score = 56.2 bits (134), Expect(2) = 3e-10
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   VP P  D R  IL+ H  +  +++ VD   +A   +    +G
Sbjct: 302 DMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLA--ADTAEFSG 359

Query: 256 ADLASLVNEAAMAALEE 306
           A LASL  EA M A+ +
Sbjct: 360 AQLASLATEAGMFAIRD 376



 Score = 28.1 bits (61), Expect(2) = 3e-10
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D+R  + +I ATN
Sbjct: 278 QLLSEMDGFDERGDIRIIAATN 299

---

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score = 56.6 bits (135), Expect(2) = 4e-10
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVA-ILKAHTEKKTLSEDVDLETIARREECNNLT 252
            D++D A+LRPGRF K  ++ +     + A IL+A T K  L  DV L+ +A +      T
Sbjct: 1182 DLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPL-TYT 1240

Query: 253  GADLASLVNEAAM-------AALEERCEFLAKGDSSMS---------TDLTNKIKLQHFE 384
            GADL +L ++A +        A++E+   L  G  S +          D+   +  + F 
Sbjct: 1241 GADLYALCSDAMLKAITRKATAVDEKINALPNGPVSTAWFFDHLATKEDVNVMVTEEDFL 1300

Query: 385  HALSKVKPSVSEQQRKHFDALSKKYSA 465
             A  ++ PSVS ++ +HF+ + + + A
Sbjct: 1301 SAQGELVPSVSAKELEHFERIRQTFEA 1327



 Score = 27.3 bits (59), Expect(2) = 4e-10
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
 Frame = +3

Query: 3    QLLVELDGA----DQRHGVYVIGATN 68
            QLL ELDG     +   GV+VIGATN
Sbjct: 1154 QLLAELDGMNGGEENSGGVFVIGATN 1179

---

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 58.2 bits (139), Expect(2) = 4e-10
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D +D A+ RPGRF ++    LP  + R  IL  HT K   ++ +     A  E  +   
Sbjct: 542 LDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYC 601

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDL-TNKIKLQHFEHALSKVKPS 411
           GADL  L  EA +  L  R   +      +  D+ T KI  +HF HA+ ++ P+
Sbjct: 602 GADLKFLCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPA 655



 Score = 25.8 bits (55), Expect(2) = 4e-10
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL  +DG D R  V VIGATN
Sbjct: 520 LLALMDGLDGRGEVVVIGATN 540

---

>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 59.3 bits (142), Expect(2) = 4e-10
 Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
 Frame = +1

Query: 49  MLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHT----EKKTLSEDVDLE 216
           +L+ +    D++DEA+LRPGR   +  + LP    R+ IL+ HT    E   L  D++L+
Sbjct: 365 LLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQ 424

Query: 217 TIARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTN-KIKLQHFEHAL 393
            +A R +  N +GA+L  +V  A   AL  +   L+  D +   +  N KI ++ F HA+
Sbjct: 425 ELAARTK--NYSGAELEGVVKSATSYALNRQ---LSMDDLTKPVEEENIKITMEDFLHAI 479

Query: 394 SKVKPS 411
            +V+P+
Sbjct: 480 YEVQPA 485



 Score = 24.6 bits (52), Expect(2) = 4e-10
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG +  + V +IG TN
Sbjct: 350 QLLTKIDGVEALNNVLLIGMTN 371

---

>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 29/79 (36%), Positives = 49/79 (62%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I+ +D A++RPGR  +K   PLP    +  I + HT + TL++DV L+ +   ++  +L+
Sbjct: 334 IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD--DLS 391

Query: 253 GADLASLVNEAAMAALEER 309
           GAD+ ++  EA + AL ER
Sbjct: 392 GADIKAICTEAGLMALRER 410



 Score = 25.0 bits (53), Expect(2) = 4e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D R  V VI ATN
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATN 332

---

>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 29/79 (36%), Positives = 49/79 (62%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I+ +D A++RPGR  +K   PLP    +  I + HT + TL++DV L+ +   ++  +L+
Sbjct: 334 IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD--DLS 391

Query: 253 GADLASLVNEAAMAALEER 309
           GAD+ ++  EA + AL ER
Sbjct: 392 GADIKAICTEAGLMALRER 410



 Score = 25.0 bits (53), Expect(2) = 4e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D R  V VI ATN
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATN 332

---

>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 29/79 (36%), Positives = 49/79 (62%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I+ +D A++RPGR  +K   PLP    +  I + HT + TL++DV L+ +   ++  +L+
Sbjct: 334 IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD--DLS 391

Query: 253 GADLASLVNEAAMAALEER 309
           GAD+ ++  EA + AL ER
Sbjct: 392 GADIKAICTEAGLMALRER 410



 Score = 25.0 bits (53), Expect(2) = 4e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D R  V VI ATN
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATN 332

---

>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 29/79 (36%), Positives = 49/79 (62%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I+ +D A++RPGR  +K   PLP    +  I + HT + TL++DV L+ +   ++  +L+
Sbjct: 334 IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKD--DLS 391

Query: 253 GADLASLVNEAAMAALEER 309
           GAD+ ++  EA + AL ER
Sbjct: 392 GADIKAICTEAGLMALRER 410



 Score = 25.0 bits (53), Expect(2) = 4e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D R  V VI ATN
Sbjct: 311 ELLNQLDGFDSRGDVKVIMATN 332

---

>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 30/79 (37%), Positives = 48/79 (60%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I+ +D A++RPGR  +K   PLP    +  I   HT + TL+EDV+L  +   ++  +L+
Sbjct: 333 IETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKD--DLS 390

Query: 253 GADLASLVNEAAMAALEER 309
           GAD+ ++  EA + AL ER
Sbjct: 391 GADIKAICTEAGLMALRER 409



 Score = 25.0 bits (53), Expect(2) = 4e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D R  V VI ATN
Sbjct: 310 ELLNQLDGFDSRGDVKVIMATN 331

---

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           +++D A+LRPGRF ++  V  P    RV ILK H +   L+ DVDL+ IA+      L G
Sbjct: 327 EILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTA--GLAG 384

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRK 432
           ADLA+++NEAA+ A                 +   ++K QH + A+ +    + ++ R+
Sbjct: 385 ADLANIINEAALLA---------------GRNNQKEVKQQHLKEAVERGIAGLEKKSRR 428

---

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score = 55.1 bits (131), Expect(2) = 5e-10
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            D+ID A+LRPGR  K  + P P    R+ IL   ++   L++DVDL+ +A     ++ TG
Sbjct: 987  DLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA--SVTDSFTG 1044

Query: 256  ADLASLVNEAAMAALEER--CEFLAKGDSSMSTDLT 357
            ADL +L+  A + AL        L  G SS  +DL+
Sbjct: 1045 ADLKALLYNAQLEALHGMLLSSGLQDGSSSSDSDLS 1080



 Score = 28.5 bits (62), Expect(2) = 5e-10
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3    QLLVELDGADQRHGVYVIGATN 68
            QLL +LDG +   GVYV+ AT+
Sbjct: 963  QLLTQLDGVEGLQGVYVLAATS 984

---

>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 53.9 bits (128), Expect(2) = 5e-10
 Identities = 33/92 (35%), Positives = 48/92 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           + +D A++RPGRF  +  VP P    R  ILK +  K    + VD E IAR       +G
Sbjct: 486 EALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTV--GFSG 543

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           A+L +LVN+AA+ A  +  E +   +   S D
Sbjct: 544 AELENLVNQAALKAAVDGKEMVTMKELEFSKD 575



 Score = 29.6 bits (65), Expect(2) = 5e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV +IGATN
Sbjct: 462 QLLAEMDGFKPNEGVIIIGATN 483

---

>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18|
          Length = 758

 Score = 54.3 bits (129), Expect(2) = 5e-10
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK----KTLSEDVDLETIARREECN 243
           D+ID A+LRPGRF  +  + LP    R+ I    T+K      +S+DV+L  +A   +  
Sbjct: 398 DLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTK-- 455

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKL--QHFEHALSKVKPS-- 411
           N +GA++  LV  A+  A+ +    + KG + ++T    K+K+  + F +AL+ V P+  
Sbjct: 456 NFSGAEIEGLVKSASSFAINKTVN-IGKGATKLNTKDIAKLKVTREDFLNALNDVTPAFG 514

Query: 412 VSEQQRK 432
           +SE+  K
Sbjct: 515 ISEEDLK 521



 Score = 29.3 bits (64), Expect(2) = 5e-10
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG DQ + + VIG TN
Sbjct: 374 QLLAKMDGVDQLNNILVIGMTN 395

---

>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 56.6 bits (135), Expect(2) = 5e-10
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK----KTLSEDVDLETIARREECN 243
           D+IDEA+LRPGR   K  + LP    R+ IL  HT +    + LS DVD++ +A   E  
Sbjct: 377 DLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA--VETK 434

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHAL-SKVKPSVSE 420
           N +GA+L  LV  A   A+    +   K +  M    + ++    F  +L + +KP++  
Sbjct: 435 NFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAIGT 494

Query: 421 QQRKH 435
            Q  +
Sbjct: 495 NQEDY 499



 Score = 26.9 bits (58), Expect(2) = 5e-10
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG +Q + + VIG TN
Sbjct: 353 QLLSKIDGVEQLNNILVIGMTN 374

---

>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 53.5 bits (127), Expect(2) = 6e-10
 Identities = 33/92 (35%), Positives = 48/92 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           + +D A++RPGRF  +  VP P    R  ILK +  K    + VD E IAR       +G
Sbjct: 428 EALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTV--GFSG 485

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           A+L +LVN+AA+ A  +  E +   +   S D
Sbjct: 486 AELENLVNQAALKAAVDGKEMVTMKELEFSKD 517



 Score = 29.6 bits (65), Expect(2) = 6e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV +IGATN
Sbjct: 404 QLLAEMDGFKPNEGVIIIGATN 425

---

>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 53.5 bits (127), Expect(2) = 6e-10
 Identities = 33/92 (35%), Positives = 48/92 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           + +D A++RPGRF  +  VP P    R  ILK +  K    + VD E IAR       +G
Sbjct: 428 EALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTV--GFSG 485

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           A+L +LVN+AA+ A  +  E +   +   S D
Sbjct: 486 AELENLVNQAALKAAVDGKEMVTMKELEFSKD 517



 Score = 29.6 bits (65), Expect(2) = 6e-10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG     GV +IGATN
Sbjct: 404 QLLAEMDGFKPNEGVIIIGATN 425

---

>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 53.9 bits (128), Expect(2) = 6e-10
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V  P  + R  ILK H +K   +  V    IAR       +G
Sbjct: 304 DVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTP--GFSG 361

Query: 256 ADLASLVNEAAMAA 297
           A+LA+LVNEAA+ A
Sbjct: 362 AELANLVNEAALIA 375



 Score = 29.3 bits (64), Expect(2) = 6e-10
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG +   GV +I ATN
Sbjct: 280 QMLVEMDGFEANEGVVIIAATN 301

---

>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 53.9 bits (128), Expect(2) = 6e-10
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           DV+D A+LRPGRF ++  V  P  + R  ILK H +K   +  V    IAR       +G
Sbjct: 304 DVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTP--GFSG 361

Query: 256 ADLASLVNEAAMAA 297
           A+LA+LVNEAA+ A
Sbjct: 362 AELANLVNEAALIA 375



 Score = 29.3 bits (64), Expect(2) = 6e-10
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG +   GV +I ATN
Sbjct: 280 QMLVEMDGFEANEGVVIIAATN 301

---

>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score = 60.5 bits (145), Expect(2) = 1e-09
 Identities = 36/97 (37%), Positives = 49/97 (50%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K    LP  + R  I K HT       D+  E +AR   C N TG
Sbjct: 318 DTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARL--CPNSTG 375

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKI 366
           AD+ S+  EA M A+  R + + + D     D  NK+
Sbjct: 376 ADIRSVCTEAGMYAIRARRKTVTEKD---FLDAVNKV 409



 Score = 21.9 bits (45), Expect(2) = 1e-09
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +++ +LDG D R  + V+ ATN
Sbjct: 294 EIVNQLDGFDARGNIKVLMATN 315

---

>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score = 60.5 bits (145), Expect(2) = 1e-09
 Identities = 36/97 (37%), Positives = 49/97 (50%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K    LP  + R  I K HT       D+  E +AR   C N TG
Sbjct: 317 DTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARL--CPNSTG 374

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKI 366
           AD+ S+  EA M A+  R + + + D     D  NK+
Sbjct: 375 ADIRSVCTEAGMYAIRARRKTVTEKD---FLDAVNKV 408



 Score = 21.9 bits (45), Expect(2) = 1e-09
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +++ +LDG D R  + V+ ATN
Sbjct: 293 EIVNQLDGFDARGNIKVLMATN 314

---

>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 55.1 bits (131), Expect(2) = 1e-09
 Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK----KTLSEDVDLETIARREECN 243
           D+IDEA+LRPGR   K  + LP    R+ IL  HT +    + LS DVD++ +A   E  
Sbjct: 377 DLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA--VETK 434

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHAL-SKVKPSVSE 420
           N +GA+L  LV  A   A+    +   K +  M    + ++    F  +L + +KP+   
Sbjct: 435 NFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAFGT 494

Query: 421 QQRKH 435
            Q  +
Sbjct: 495 NQEDY 499



 Score = 26.9 bits (58), Expect(2) = 1e-09
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG +Q + + VIG TN
Sbjct: 353 QLLSKIDGVEQLNNILVIGMTN 374

---

>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 55.1 bits (131), Expect(2) = 1e-09
 Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK----KTLSEDVDLETIARREECN 243
           D+IDEA+LRPGR   K  + LP    R+ IL  HT +    + LS DVD++ +A   E  
Sbjct: 377 DLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA--VETK 434

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHAL-SKVKPSVSE 420
           N +GA+L  LV  A   A+    +   K +  M    + ++    F  +L + +KP+   
Sbjct: 435 NFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAFGT 494

Query: 421 QQRKH 435
            Q  +
Sbjct: 495 NQEDY 499



 Score = 26.9 bits (58), Expect(2) = 1e-09
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG +Q + + VIG TN
Sbjct: 353 QLLSKIDGVEQLNNILVIGMTN 374

---

>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score = 57.8 bits (138), Expect(2) = 1e-09
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K   PLP   ++  I    T K  LSE+VDLE    R +   ++G
Sbjct: 315 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPD--KISG 372

Query: 256 ADLASLVNEAAMAAL-EERCEFLAKGDSSMSTDLTNKIKLQH 378
           AD+ S+  E+ M A+ E R   LAK        +  K + +H
Sbjct: 373 ADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414



 Score = 24.3 bits (51), Expect(2) = 1e-09
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG DQ   V VI ATN
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATN 312

---

>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score = 57.8 bits (138), Expect(2) = 1e-09
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K   PLP   ++  I    T K  LSE+VDLE    R +   ++G
Sbjct: 315 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPD--KISG 372

Query: 256 ADLASLVNEAAMAAL-EERCEFLAKGDSSMSTDLTNKIKLQH 378
           AD+ S+  E+ M A+ E R   LAK        +  K + +H
Sbjct: 373 ADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414



 Score = 24.3 bits (51), Expect(2) = 1e-09
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG DQ   V VI ATN
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATN 312

---

>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 32/86 (37%), Positives = 51/86 (59%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K  +PLP    R+ ILK H EK +   ++D E + +  +  N  G
Sbjct: 282 DTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTN--G 339

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           ADL ++V EA   A++E  +++ + D
Sbjct: 340 ADLRNVVTEAGFIAIKEDRDYVIQSD 365

---

>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 59.7 bits (143), Expect(2) = 2e-09
 Identities = 36/97 (37%), Positives = 49/97 (50%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K    LP  + R  I K HT       D+  E +AR   C N TG
Sbjct: 318 DTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARL--CPNSTG 375

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKI 366
           AD+ S+  EA M A+  R + + + D     D  NK+
Sbjct: 376 ADIRSVCTEAGMYAIRARRKTVTEKD---FLDAVNKV 409



 Score = 21.9 bits (45), Expect(2) = 2e-09
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +++ +LDG D R  + V+ ATN
Sbjct: 294 EIVNQLDGFDARGNIKVLMATN 315

---

>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 59.7 bits (143), Expect(2) = 2e-09
 Identities = 36/97 (37%), Positives = 49/97 (50%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K    LP  + R  I K HT       D+  E +AR   C N TG
Sbjct: 318 DTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARL--CPNSTG 375

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKI 366
           AD+ S+  EA M A+  R + + + D     D  NK+
Sbjct: 376 ADIRSVCTEAGMYAIRARRKTVTEKD---FLDAVNKV 409



 Score = 21.9 bits (45), Expect(2) = 2e-09
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +++ +LDG D R  + V+ ATN
Sbjct: 294 EIVNQLDGFDARGNIKVLMATN 315

---

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 55.5 bits (132), Expect(2) = 2e-09
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK-KTLSEDVDLETIARREECNNLT 252
           D ID A+LRPGR  +  +V  P  + R+ ILK  T+K  T    VDL  +A R E    +
Sbjct: 663 DEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTE--GYS 720

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRK 432
           GA++  L  EA +AA+ E  +               K++L+HFE A   +   ++ +   
Sbjct: 721 GAEVVLLCQEAGLAAIMEDLD-------------VAKVELRHFEKAFKGIARGITPEMLS 767

Query: 433 HFD 441
           +++
Sbjct: 768 YYE 770



 Score = 25.8 bits (55), Expect(2) = 2e-09
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL E+DG ++  GV ++ ATN
Sbjct: 640 LLNEIDGVEELKGVVIVAATN 660

---

>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 53.1 bits (126), Expect(2) = 2e-09
 Identities = 27/77 (35%), Positives = 44/77 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A+LRPGRF +   VP P    R  I + HT    +++ VD   +A   +  +L+G
Sbjct: 299 DMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELA--ADTGDLSG 356

Query: 256 ADLASLVNEAAMAALEE 306
           AD+ ++  EA M A+ +
Sbjct: 357 ADVKAICTEAGMFAIRD 373



 Score = 28.1 bits (61), Expect(2) = 2e-09
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG D+R  + +I ATN
Sbjct: 275 QLLSEMDGFDERGDIRIIAATN 296

---

>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 36/119 (30%), Positives = 64/119 (53%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           +++D A++RPGRF ++  V  P  + RV ILK H +   L+ DV+L+ +A+      L G
Sbjct: 321 EILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTA--GLAG 378

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRK 432
           ADLA+++NEAA+ A                 +   ++K QH + A+ +    + ++ R+
Sbjct: 379 ADLANIINEAALLA---------------GRNNQKEVKQQHLKEAVERGIAGLEKKSRR 422

---

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 57.0 bits (136), Expect(2) = 3e-09
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARR--EECNNL 249
           D++D A+LRPGRF ++ F+  P    R +I K H     L   ++ + +AR+        
Sbjct: 457 DILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGF 516

Query: 250 TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           +GAD+A++ NEAA+ A               +  L++ I  +HFE A+ +V
Sbjct: 517 SGADVANVCNEAALIA---------------ARHLSDSINQKHFEQAIERV 552



 Score = 23.9 bits (50), Expect(2) = 3e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG +    V ++  TN
Sbjct: 433 QLLVEMDGFNTTTNVVILAGTN 454

---

>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P  + R+ ILK H+ K  L+  ++L  IA  E     +
Sbjct: 292 IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA--ELMPGAS 349

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++  +  EA M AL ER   + + D  M+
Sbjct: 350 GAEVKGVCTEAGMYALRERRVHVTQEDFEMA 380



 Score = 21.2 bits (43), Expect(2) = 3e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 269 ELLNQLDGFEATKNIKVIMATN 290

---

>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 56.6 bits (135), Expect(2) = 3e-09
 Identities = 37/108 (34%), Positives = 52/108 (48%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K   PLP   ++  I    T K  LSE+VDLE    R +   ++G
Sbjct: 312 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPD--RVSG 369

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSK 399
           AD+ ++  EA M A+ E    +   D        N IK    E+   K
Sbjct: 370 ADINAICQEAGMNAVRENRYIVLPKD--FEKGYKNNIKKDESEYEFYK 415



 Score = 24.3 bits (51), Expect(2) = 3e-09
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG DQ   V VI ATN
Sbjct: 288 ELLNQMDGFDQTTNVKVIMATN 309

---

>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P  + R+ ILK H+ K  L+  ++L  IA  E     +
Sbjct: 298 IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA--ELMPGAS 355

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++  +  EA M AL ER   + + D  M+
Sbjct: 356 GAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386



 Score = 21.2 bits (43), Expect(2) = 3e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 275 ELLNQLDGFEATKNIKVIMATN 296

---

>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P  + R+ ILK H+ K  L+  ++L  IA  E     +
Sbjct: 298 IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA--ELMPGAS 355

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++  +  EA M AL ER   + + D  M+
Sbjct: 356 GAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386



 Score = 21.2 bits (43), Expect(2) = 3e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 275 ELLNQLDGFEATKNIKVIMATN 296

---

>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P  + R+ ILK H+ K  L+  ++L  IA  E     +
Sbjct: 298 IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA--ELMPGAS 355

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++  +  EA M AL ER   + + D  M+
Sbjct: 356 GAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386



 Score = 21.2 bits (43), Expect(2) = 3e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 275 ELLNQLDGFEATKNIKVIMATN 296

---

>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P  + R+ ILK H+ K  L+  ++L  IA  E     +
Sbjct: 298 IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA--ELMPGAS 355

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++  +  EA M AL ER   + + D  M+
Sbjct: 356 GAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386



 Score = 21.2 bits (43), Expect(2) = 3e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 275 ELLNQLDGFEATKNIKVIMATN 296

---

>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P  + R+ ILK H+ K  L+  ++L  IA  E     +
Sbjct: 298 IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA--ELMPGAS 355

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++  +  EA M AL ER   + + D  M+
Sbjct: 356 GAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386



 Score = 21.2 bits (43), Expect(2) = 3e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 275 ELLNQLDGFEATKNIKVIMATN 296

---

>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 31/74 (41%), Positives = 49/74 (66%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           +++D A++RPGRF ++  V  P  + RV ILK H +   L+ DV+L+ +A+      L G
Sbjct: 321 EILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTA--GLAG 378

Query: 256 ADLASLVNEAAMAA 297
           ADLA+++NEAA+ A
Sbjct: 379 ADLANIINEAALLA 392

---

>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score = 52.0 bits (123), Expect(2) = 4e-09
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVA-ILKAHTEKKTLSEDVDLETIARREECN-NL 249
            D++DEA+LRPGRF K  ++ +    E+ A I++A T K  L   VDL  IA  E C    
Sbjct: 964  DLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIA--ETCPFTY 1021

Query: 250  TGADLASLVNEAAMAALEERCEFLAK-----------GDS----------SMSTDLTNKI 366
            TGAD  +L ++A + A+      + K           GD           +   D    +
Sbjct: 1022 TGADFYALCSDAMLNAMTRTAGAVEKKINEYNCNREEGDKISTRFWFDNIAKPEDTQVLV 1081

Query: 367  KLQHFEHALSKVKPSVSEQQRKHFDALSKKY 459
            K + F  A  ++ PSVS ++ +H+ ++ + +
Sbjct: 1082 KSEDFAKARDELVPSVSAEELQHYLSVRENF 1112



 Score = 28.5 bits (62), Expect(2) = 4e-09
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
 Frame = +3

Query: 3    QLLVELDG---ADQRHGVYVIGATN 68
            QLL ELDG   A+   GV+V+GATN
Sbjct: 937  QLLAELDGMSGAEGGDGVFVVGATN 961

---

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 52.0 bits (123), Expect(2) = 4e-09
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
 Frame = +1

Query: 49  MLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKT----LSEDVDLE 216
           +++ +   +D+ID A+LRPGRF  +  + LP    R  I   HT+K T    LS DV+ +
Sbjct: 426 LVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFD 485

Query: 217 TIARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALS 396
            ++   +  N TGA++  L N A   A+    +  A       +    KI    F  AL+
Sbjct: 486 ELSTLTK--NFTGAEIEGLCNSAKSYAISRHTKKGALAQIDPESIAKMKITRDDFLLALN 543

Query: 397 KVKPS 411
            ++P+
Sbjct: 544 DIRPA 548



 Score = 28.5 bits (62), Expect(2) = 4e-09
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ++DG DQ + + VIG TN
Sbjct: 411 QLLSKMDGVDQLNNILVIGMTN 432

---

>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4|
          Length = 443

 Score = 56.2 bits (134), Expect(2) = 4e-09
 Identities = 29/79 (36%), Positives = 47/79 (59%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I+ +D A++RPGR  +K   PLP    +  I + HT + TL ++V+LE     ++   L+
Sbjct: 337 IESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKD--ELS 394

Query: 253 GADLASLVNEAAMAALEER 309
           GAD+ ++  EA + AL ER
Sbjct: 395 GADIKAMCTEAGLLALRER 413



 Score = 24.3 bits (51), Expect(2) = 4e-09
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D R  V V+ ATN
Sbjct: 314 ELLNQLDGFDSRGDVKVLMATN 335

---

>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score = 59.3 bits (142), Expect(2) = 4e-09
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P  + R+ ILK H+ K  L+  ++L  IA  E     +
Sbjct: 297 IDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA--ELMPGAS 354

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++  +  EA M AL ER   + + D  M+
Sbjct: 355 GAEVKGVCTEAGMYALRERRVHVTQEDFEMA 385



 Score = 21.2 bits (43), Expect(2) = 4e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 274 ELLNQLDGFEATKNIKVIMATN 295

---

>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score = 59.3 bits (142), Expect(2) = 4e-09
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P  + R+ ILK H+ K  L+  ++L  IA  E     +
Sbjct: 294 IDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA--ELMPGAS 351

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++  +  EA M AL ER   + + D  M+
Sbjct: 352 GAEVKGVCTEAGMYALRERRVHVTQEDFEMA 382



 Score = 21.2 bits (43), Expect(2) = 4e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + VI ATN
Sbjct: 271 ELLNQLDGFEATKNIKVIMATN 292

---

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 53.5 bits (127), Expect(2) = 4e-09
 Identities = 36/130 (27%), Positives = 64/130 (49%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGRF +   VPLP    R  I   + +K  + ++++LE +++  E    +
Sbjct: 283 IDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTE--GFS 340

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRK 432
           GAD+ ++  EAA  A+                D  NK+ +     A++K+  +V   + +
Sbjct: 341 GADIKNVCVEAAYMAIR---------------DGRNKVTMNDLVEAINKI--NVKRNKME 383

Query: 433 HFDALSKKYS 462
                 +KYS
Sbjct: 384 SMKERREKYS 393



 Score = 26.9 bits (58), Expect(2) = 4e-09
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL ELDG D    V +I ATN
Sbjct: 260 QLLAELDGFDPLDNVKIIAATN 281

---

>FTSH_CHLVU (P56369) Cell division protein ftsH homolog|
          Length = 1720

 Score = 47.4 bits (111), Expect(2) = 5e-09
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
            +V+D A+LRPGRF K   V LP   +RV IL+ + +  TL     +      E     T 
Sbjct: 1181 EVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQ--TLGYQKTMPWAYFGERTVGFTA 1238

Query: 256  ADLASLVNEAAMAAL----EERCEFLAKGDSSMSTDLTNK 363
            ADLA+L+NE+A+ A+        E L  G   ++T  + K
Sbjct: 1239 ADLATLMNESALKAILNQSNHTIETLEHGIERLTTSESEK 1278



 Score = 32.7 bits (73), Expect(2) = 5e-09
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 3    QLLVELDGADQRHGVYVIGATN 68
            QLL+ELDG   R+GV + GATN
Sbjct: 1157 QLLIELDGIQGRNGVVIFGATN 1178

---

>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLS-EDVDLETIARREECNNLTGA 258
           ID+A  R  RF +K ++PLP  + R+  LK    K+  S +D+D E I    E    +G+
Sbjct: 631 IDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTE--GFSGS 686

Query: 259 DLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKHF 438
           DL SL  EAAM  + +  + L   D     D    I+++ F++AL  +K SVS +  + +
Sbjct: 687 DLTSLAKEAAMEPIRDLGDKLMFAD----FDKIRGIEIKDFQNALLTIKKSVSSESLQKY 742

Query: 439 DALSKKYSAN 468
           +  S K+ +N
Sbjct: 743 EEWSSKFGSN 752

---

>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score = 53.1 bits (126), Expect(2) = 6e-09
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK--KTLSEDVDLETIARREECNNL 249
           D +D A+ RPGRF ++ + PLP    R  IL+  T K    LS +  ++ +A   +    
Sbjct: 565 DAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNF-IDKLAFLTK--GY 621

Query: 250 TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTN-KIKLQHFEHALSKVKPS 411
            GADL SL  EAA+ +++     + + +  +  D +  K+K+  F  AL K+ PS
Sbjct: 622 GGADLRSLCTEAALISIQRSFPQIYRSNDKLLVDPSKIKVKVSDFMLALKKIVPS 676



 Score = 26.6 bits (57), Expect(2) = 6e-09
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL  +DG D R  V VIGATN
Sbjct: 542 LLALMDGMDNRGQVIVIGATN 562

---

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 55.8 bits (133), Expect(2) = 6e-09
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARR--EECNNL 249
           D++D A+LRPGRF ++ F+  P    R +I K H     L   ++ + +AR+        
Sbjct: 456 DILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGF 515

Query: 250 TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           +GAD+A++ NEAA+ A               +  L++ I  +HFE A+ +V
Sbjct: 516 SGADVANVCNEAALIA---------------ARHLSDAINEKHFEQAIERV 551



 Score = 23.9 bits (50), Expect(2) = 6e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG +    V ++  TN
Sbjct: 432 QLLVEMDGFNTTTNVVILAGTN 453

---

>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score = 55.5 bits (132), Expect(2) = 6e-09
 Identities = 30/78 (38%), Positives = 45/78 (57%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           + +DEA++RPGR  +K    LP  + R  IL+ H +   + +D+  E IAR   C + TG
Sbjct: 329 NTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARL--CPSQTG 386

Query: 256 ADLASLVNEAAMAALEER 309
           A+L S+  EA M A+  R
Sbjct: 387 AELRSVCTEAGMFAIRAR 404



 Score = 24.3 bits (51), Expect(2) = 6e-09
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +L+ +LDG D R  + V+ ATN
Sbjct: 305 ELITQLDGFDPRGNIKVLFATN 326

---

>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 33/86 (38%), Positives = 52/86 (60%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           + +D A+LRPGRF ++  V  P    R+ IL+ + +K  L ++V+L+ IA R       G
Sbjct: 325 ETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTP--GFAG 382

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           ADLA+LVNEAA+ A   + + + + D
Sbjct: 383 ADLANLVNEAALLAARNKQDSVTEAD 408

---

>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1017

 Score = 51.2 bits (121), Expect(2) = 8e-09
 Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVA-ILKAHTEKKTLSEDVDLETIARREECNNLT 252
            D++DEA+LRPGRF K  ++ +    E+ A I++A T K  +S D++ + +   +   + T
Sbjct: 867  DLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELV-SDFPFSYT 925

Query: 253  GADLASLVNEAAMAAL----EERCEFLAKGDSSMSTDLTNK---------------IKLQ 375
            GAD  +L ++A + A+    +E  E + K +    T ++ +               +K +
Sbjct: 926  GADFYALCSDAMLKAMTRISKEIDEKVDKYNQDNGTSISIRYWFDHVCSDEDTDVIVKKE 985

Query: 376  HFEHALSKVKPSVSEQQRKHFDALSKKY 459
             F +A  ++ PSVS+Q+ +H+  +   +
Sbjct: 986  DFLNANKELIPSVSQQELEHYKQIRANF 1013



 Score = 28.1 bits (61), Expect(2) = 8e-09
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 3   QLLVELDG-ADQRHGVYVIGATN 68
           QLL ELDG +    GV++IGATN
Sbjct: 842 QLLAELDGMSSDGDGVFIIGATN 864

---

>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 56.2 bits (134), Expect(2) = 8e-09
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A++RPGR  +K    LP  + R  I K H    ++  D+  E +AR   C N TG
Sbjct: 324 DTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL--CPNSTG 381

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           A++ S+  EA M A+  R +   + D
Sbjct: 382 AEIRSVCTEAGMFAIRARRKIATEKD 407



 Score = 23.1 bits (48), Expect(2) = 8e-09
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +L+ +LDG D R  + V+ ATN
Sbjct: 300 ELINQLDGFDPRGNIKVLMATN 321

---

>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 56.2 bits (134), Expect(2) = 8e-09
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A++RPGR  +K    LP  + R  I K H    ++  D+  E +AR   C N TG
Sbjct: 324 DTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL--CPNSTG 381

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           A++ S+  EA M A+  R +   + D
Sbjct: 382 AEIRSVCTEAGMFAIRARRKIATEKD 407



 Score = 23.1 bits (48), Expect(2) = 8e-09
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +L+ +LDG D R  + V+ ATN
Sbjct: 300 ELINQLDGFDPRGNIKVLMATN 321

---

>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 56.2 bits (134), Expect(2) = 8e-09
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A++RPGR  +K    LP  + R  I K H    ++  D+  E +AR   C N TG
Sbjct: 324 DTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL--CPNSTG 381

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           A++ S+  EA M A+  R +   + D
Sbjct: 382 AEIRSVCTEAGMFAIRARRKIATEKD 407



 Score = 23.1 bits (48), Expect(2) = 8e-09
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +L+ +LDG D R  + V+ ATN
Sbjct: 300 ELINQLDGFDPRGNIKVLMATN 321

---

>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score = 55.8 bits (133), Expect(2) = 1e-08
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A++RPGR  +K    LP  + R  I K H    ++  D+  E +AR   C N TG
Sbjct: 325 DTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL--CPNSTG 382

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           A++ S+  EA M A+  R +   + D
Sbjct: 383 AEIRSVCTEAGMFAIRARRKVATEKD 408



 Score = 23.1 bits (48), Expect(2) = 1e-08
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +L+ +LDG D R  + V+ ATN
Sbjct: 301 ELINQLDGFDPRGNIKVLMATN 322

---

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           IDEA+ R  R  K+ ++PLP A  R  +L+ + ++  L++DV++E IA  E  +  +GAD
Sbjct: 362 IDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIA--ENMDGYSGAD 417

Query: 262 LASLVNEAAMAALEERCEFLAKGD--SSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKH 435
           + ++  +A++ A+  R E L   +  +    D+     ++ FE AL KV  SVS    + 
Sbjct: 418 ITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTTMEDFEMALKKVSKSVSASDIEK 477

Query: 436 FD 441
           ++
Sbjct: 478 YE 479

---

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 56.6 bits (135), Expect(2) = 1e-08
 Identities = 30/86 (34%), Positives = 46/86 (53%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K  + LP    R+ ILK H+ K T   ++D E + +  +    + 
Sbjct: 300 DTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSD--GFSA 357

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           ADL ++  EA M A+    EF+   D
Sbjct: 358 ADLRNVCTEAGMFAIRAEREFVIDED 383



 Score = 21.9 bits (45), Expect(2) = 1e-08
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG D    V VI ATN
Sbjct: 276 ELLNQLDGFDSLGKVKVIMATN 297

---

>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score = 55.1 bits (131), Expect(2) = 2e-08
 Identities = 30/86 (34%), Positives = 47/86 (54%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A++RPGR  +K    LP    R  ILK H ++ ++  D+  + +AR   C N TG
Sbjct: 327 DTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARL--CPNSTG 384

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           A++ S+  EA M A+  R +   + D
Sbjct: 385 AEIRSVCTEAGMFAIRARRKVATEKD 410



 Score = 23.1 bits (48), Expect(2) = 2e-08
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +L+ +LDG D R  + V+ ATN
Sbjct: 303 ELINQLDGFDPRGNIKVLMATN 324

---

>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score = 53.9 bits (128), Expect(2) = 2e-08
 Identities = 30/77 (38%), Positives = 42/77 (54%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K   PLP   ++  I    T K  LSE+VDLE    R +   ++G
Sbjct: 315 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPD--KISG 372

Query: 256 ADLASLVNEAAMAALEE 306
           AD+ S+     M A+ E
Sbjct: 373 ADINSICQARGMLAVRE 389



 Score = 24.3 bits (51), Expect(2) = 2e-08
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG DQ   V VI ATN
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATN 312

---

>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 53.9 bits (128), Expect(2) = 2e-08
 Identities = 29/77 (37%), Positives = 43/77 (55%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K   PLP   ++  +      +  LS+DVDLE    R +   ++G
Sbjct: 311 DTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPD--KISG 368

Query: 256 ADLASLVNEAAMAALEE 306
           AD+ S+  EA M A+ E
Sbjct: 369 ADINSICQEAGMQAVRE 385



 Score = 24.3 bits (51), Expect(2) = 2e-08
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG DQ   V VI ATN
Sbjct: 287 ELLNQMDGFDQSTNVKVIMATN 308

---

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K  + LP    R+ ILK H    T   ++D E I +  +     G
Sbjct: 283 DTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSD--GFNG 340

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           ADL ++  EA M A+    +F+ + D
Sbjct: 341 ADLRNVCTEAGMFAIRADHDFVVQED 366



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG D  H V +I ATN
Sbjct: 259 ELLNQMDGFDTLHRVKMIMATN 280

---

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K  + LP    R+ ILK H    T   ++D E I +  +     G
Sbjct: 283 DTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSD--GFNG 340

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           ADL ++  EA M A+    +F+ + D
Sbjct: 341 ADLRNVCTEAGMFAIRADHDFVVQED 366



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG D  H V +I ATN
Sbjct: 259 ELLNQMDGFDTLHRVKMIMATN 280

---

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K  + LP    R+ ILK H    T   ++D E I +  +     G
Sbjct: 283 DTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSD--GFNG 340

Query: 256 ADLASLVNEAAMAALEERCEFLAKGD 333
           ADL ++  EA M A+    +F+ + D
Sbjct: 341 ADLRNVCTEAGMFAIRADHDFVVQED 366



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG D  H V +I ATN
Sbjct: 259 ELLNQMDGFDTLHRVKMIMATN 280

---

>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = +1

Query: 10  LLNSM----VQISVMVFMLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAH 177
           LLN M    V ++V V M    +   D +D A+LRPGR  +K   PLP   ++  I +  
Sbjct: 277 LLNQMDGFDVSVNVKVIMATNRQ---DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVI 333

Query: 178 TEKKTLSEDVDLETIARREECNNLTGADLASLVNEAAMAALEE 306
           T K  LS++VDLE    R +   L+GA++ S+  EA M A+ +
Sbjct: 334 TSKMNLSDEVDLEDYVSRPD--KLSGAEIQSICQEAGMHAIRK 374

---

>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 31/83 (37%), Positives = 46/83 (55%)
 Frame = +1

Query: 52  LLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARR 231
           +L     +DV+D A+LR GR  +K   PLP  D R  IL+ H+ K T  +D++ + +AR 
Sbjct: 323 VLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELAR- 381

Query: 232 EECNNLTGADLASLVNEAAMAAL 300
              +   GA L ++  EA M AL
Sbjct: 382 -STDEFNGAQLKAVTVEAGMIAL 403

---

>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS5)
          Length = 1165

 Score = 48.9 bits (115), Expect(2) = 3e-08
 Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVA-ILKAHTEKKTLSEDVDLETIARREECN-NL 249
            D++DEA+LRPGRF K  ++ +    E+ + I++A + K  L   VDL+ +A  E C    
Sbjct: 970  DLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVA--ESCPFTF 1027

Query: 250  TGADLASLVNEAAMAALE----------ERCEFLAKGDSSMST-----------DLTNKI 366
            TGAD  +L ++A + A+           +R        S +ST           D+   +
Sbjct: 1028 TGADFYALCSDAMLNAMTRIANTVDEKIKRYNEELPEKSQVSTRWWFDNVATKEDIDVLV 1087

Query: 367  KLQHFEHALSKVKPSVSEQQRKHF 438
             L+ F+ +  ++ PSVS ++  H+
Sbjct: 1088 TLEDFDKSRKELVPSVSAEELDHY 1111



 Score = 28.5 bits (62), Expect(2) = 3e-08
 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +3

Query: 3    QLLVELDG---ADQRHGVYVIGATN 68
            QLL ELDG    D   GV+V+GATN
Sbjct: 943  QLLAELDGMSGGDGGDGVFVVGATN 967

---

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           IDEA+ R  R  K+ ++PLP A  R  +L+    +  L++DVDL +IA  E     +GAD
Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIA--ENMEGYSGAD 420

Query: 262 LASLVNEAAMAALEERCEFLAKGD--SSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKH 435
           + ++  +A++ A+  R E L   +  +    ++     ++ FE AL KV  SVS    + 
Sbjct: 421 ITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIER 480

Query: 436 FD 441
           ++
Sbjct: 481 YE 482

---

>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 49.7 bits (117), Expect(2) = 4e-08
 Identities = 28/75 (37%), Positives = 43/75 (57%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D +D+A+LRPGRF  +  VP P    RV I   +  K   S  +D + +A+       T
Sbjct: 347 VDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGS--TGFT 404

Query: 253 GADLASLVNEAAMAA 297
           GAD+ ++VN+AA+ A
Sbjct: 405 GADIENMVNQAALKA 419



 Score = 27.3 bits (59), Expect(2) = 4e-08
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG  +  G+ VI ATN
Sbjct: 324 QLLSEMDGFTRNEGIIVIAATN 345

---

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           IDEA+ R  R  K+ ++PLP  + R A++  +     ++ DV++E +ARR E    +G D
Sbjct: 396 IDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTE--GYSGDD 451

Query: 262 LASLVNEAAMAALEERCEFLAKGD-SSMSTD--LTNKIKLQHFEHALSKVKPSVSEQQ-R 429
           L ++  +A+M  +  +     + +  +MS D    + + +  FE A+ KV+PSVS     
Sbjct: 452 LTNVCRDASMNGMRRKIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIE 511

Query: 430 KHFDALSKKYSA 465
           KH   LS+  SA
Sbjct: 512 KHEKWLSEFGSA 523

---

>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding|
           protein homolog)
          Length = 414

 Score = 55.1 bits (131), Expect(2) = 5e-08
 Identities = 32/91 (35%), Positives = 49/91 (53%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID++D A+LRPGR  +K   P P    R+ ILK H+ +  L+  ++L  IA        +
Sbjct: 306 IDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIA--SMLGGAS 363

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           GA++ +   EA M AL ER   + + D  M+
Sbjct: 364 GAEIKATCTEAGMFALRERRVHVTQEDLEMA 394



 Score = 21.6 bits (44), Expect(2) = 5e-08
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG +    + +I ATN
Sbjct: 283 ELLNQLDGFESTQNIKIIMATN 304

---

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 52.0 bits (123), Expect(2) = 8e-08
 Identities = 33/118 (27%), Positives = 59/118 (50%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D++D A++RPGR  +  F+ LP   ER  I + H +   L++     +    E     +G
Sbjct: 459 DILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSG 518

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQR 429
           AD+A++ NEAA+ A  E       G +S+ T         +FE+A+ +V    +++ +
Sbjct: 519 ADIANICNEAALHAARE-------GHTSVHT--------LNFEYAVERVLAGTAKKSK 561



 Score = 23.9 bits (50), Expect(2) = 8e-08
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG      V V+ +TN
Sbjct: 435 QLLVEMDGMGTTDHVIVLASTN 456

---

>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score = 52.0 bits (123), Expect(2) = 9e-08
 Identities = 30/92 (32%), Positives = 48/92 (52%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           + +D A+LRPGR  +K    LP  + R  I + H++  ++   +  E I+R   C N TG
Sbjct: 359 NTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRL--CPNSTG 416

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           A+L S+  EA M A+  R +   + D   + D
Sbjct: 417 AELRSVCTEAGMFAIRARRKVATEKDFLKAVD 448



 Score = 23.9 bits (50), Expect(2) = 9e-08
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +L+ +LDG D R  + V+ ATN
Sbjct: 335 ELITQLDGFDPRGNIKVMFATN 356

---

>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog|
          Length = 387

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 29/75 (38%), Positives = 45/75 (60%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D ID A+LRPGR  +K   PLP   ++  +  A T K +L++ VD+E++  R E   ++ 
Sbjct: 284 DTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPE--KISC 341

Query: 256 ADLASLVNEAAMAAL 300
           AD+ S+  EA M A+
Sbjct: 342 ADINSICQEAGMLAV 356



 Score = 21.9 bits (45), Expect(2) = 1e-07
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL ++DG D    V VI ATN
Sbjct: 260 ELLNQMDGFDPAANVKVIMATN 281

---

>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1021

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 21/152 (13%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGADERVA-ILKAHTEKKTLSEDVDLETIARREECN-NL 249
            D++DEA+LRPGRF K  ++ +   +E+ A IL+A T K TL  DV L+ +A    C    
Sbjct: 872  DLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLA--ASCPFTY 929

Query: 250  TGADLASLVNEAAMAAL-------EERCEFLAKGDS------------SMSTDLTNKIKL 372
            TGAD  +L ++A + A+       +E+     +  +            + + D +  + +
Sbjct: 930  TGADFYALCSDAMLNAMTRIAGNVDEKVASYNRAHNKNYSVRQWFDVIATAEDTSITVCM 989

Query: 373  QHFEHALSKVKPSVSEQQRKHFDALSKKYSAN 468
            Q F  A  ++ PSVSE +  H+ A+   + ++
Sbjct: 990  QDFVKAQRELVPSVSEGELNHYLAIRDNFESS 1021

---

>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score = 48.5 bits (114), Expect(2) = 2e-07
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 23/145 (15%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGA-DERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
            D++D A+LRPGRF K  ++ +    D++V I++A T K TL   V L ++A R      T
Sbjct: 1143 DLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPF-TYT 1201

Query: 253  GADLASLVNEAAMAALEERCEFL---------AKGDS-------------SMSTDLTNKI 366
            GAD  +L ++A + A+  +   +         A G               +   D++  +
Sbjct: 1202 GADFYALCSDAMLKAVTRQATLVDTKIRELNAAAGPEGKQISTAYFFDHYATKEDISVMV 1261

Query: 367  KLQHFEHALSKVKPSVSEQQRKHFD 441
              Q F  A  ++ PSVS  + +H++
Sbjct: 1262 TEQDFLDAHRELVPSVSAGELEHYE 1286



 Score = 26.2 bits (56), Expect(2) = 2e-07
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
 Frame = +3

Query: 3    QLLVELDGADQRHG----VYVIGATN 68
            QLL ELDG     G    V+VIGATN
Sbjct: 1115 QLLAELDGMSGGEGGGGGVFVIGATN 1140

---

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           IDEA+ R  R  K+ ++PLP A  R  +L+    +  L++DV+L +IA  E     +GAD
Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIA--ENMEGYSGAD 420

Query: 262 LASLVNEAAMAALEERCEFLAKGD--SSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKH 435
           + ++  +A++ A+  R E L   +  +    ++     ++ FE AL KV  SVS    + 
Sbjct: 421 ITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIER 480

Query: 436 FD 441
           ++
Sbjct: 481 YE 482

---

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +1

Query: 76   DVIDEAVLRPGRFGKKHFVPLPGA-DERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
            D++D A+LRPGRF K  ++ +    D+++ IL+A T K TL   V L ++A++      T
Sbjct: 1146 DLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPF-TYT 1204

Query: 253  GADLASLVNEAAMAAL 300
            GAD  +L ++A + A+
Sbjct: 1205 GADFYALCSDAMLKAV 1220



 Score = 28.5 bits (62), Expect(2) = 2e-07
 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
 Frame = +3

Query: 3    QLLVELDGA----DQRHGVYVIGATN 68
            QLL ELDG     D   GV+VIGATN
Sbjct: 1118 QLLAELDGMSGGDDTSGGVFVIGATN 1143

---

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREEC--NNL 249
           D++D A+ RPGRF ++ ++  P    R +I K H     L   +  + ++R+        
Sbjct: 323 DILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGF 382

Query: 250 TGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKV 402
           TGAD++++ NEAA+ A               +  L+  ++ +HFE A+ +V
Sbjct: 383 TGADISNVCNEAALIA---------------ARHLSPSVQERHFEQAIERV 418



 Score = 23.9 bits (50), Expect(2) = 2e-07
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG +    V V+  TN
Sbjct: 299 QMLVEMDGFNSSTNVVVLAGTN 320

---

>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score = 53.1 bits (126), Expect(2) = 2e-07
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D++D A+LR GR  +K   P+P  + R  I++ H+ K  +S DV+ E +AR  +  +  
Sbjct: 335 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD--DFN 392

Query: 253 GADLASLVNEAAMAALEERCEFLAKGD---SSMSTDLTNKIKLQHF 381
           GA   ++  EA M AL      L   D     +      K  LQ++
Sbjct: 393 GAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 438



 Score = 21.2 bits (43), Expect(2) = 2e-07
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG      V VI ATN
Sbjct: 312 ELLNQLDGFQPNTQVKVIAATN 333

---

>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score = 53.1 bits (126), Expect(2) = 2e-07
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D++D A+LR GR  +K   P+P  + R  I++ H+ K  +S DV+ E +AR  +  +  
Sbjct: 335 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD--DFN 392

Query: 253 GADLASLVNEAAMAALEERCEFLAKGD---SSMSTDLTNKIKLQHF 381
           GA   ++  EA M AL      L   D     +      K  LQ++
Sbjct: 393 GAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 438



 Score = 21.2 bits (43), Expect(2) = 2e-07
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG      V VI ATN
Sbjct: 312 ELLNQLDGFQPNTQVKVIAATN 333

---

>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score = 52.8 bits (125), Expect(2) = 3e-07
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D++D A+LR GR  +K   P+P  + R  I++ H+ K  +S DV+ E +AR  +  +  
Sbjct: 338 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD--DFN 395

Query: 253 GADLASLVNEAAMAALEERCEFLAKGD---SSMSTDLTNKIKLQHF 381
           GA   ++  EA M AL      L   D     +      K  LQ++
Sbjct: 396 GAQSKAVCVEAGMIALRRGATELTHEDHMEGILEVQAKKKANLQYY 441



 Score = 21.2 bits (43), Expect(2) = 3e-07
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG      V VI ATN
Sbjct: 315 ELLNQLDGFQPNTQVKVIAATN 336

---

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           IDEA+ R  R  K+ ++PLP A  R  +L+    +  L++DV+L +IA  E     +GAD
Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIA--ENMEGYSGAD 420

Query: 262 LASLVNEAAMAALEERCEFLAKGD-SSMSTDLTN-KIKLQHFEHALSKVKPSVSEQQRKH 435
           + ++  +A++ A+  R E L   +  ++S +  +    ++ FE AL K+  SVS    + 
Sbjct: 421 ITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTTMEDFEMALKKISKSVSAADIER 480

Query: 436 FD 441
           ++
Sbjct: 481 YE 482

---

>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 29/79 (36%), Positives = 47/79 (59%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           I  +D A++RPGR  +K     P    +  I   HT K  L EDV+LE + + ++  +L+
Sbjct: 341 ISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKD--DLS 398

Query: 253 GADLASLVNEAAMAALEER 309
           GA++ ++V+EA + AL ER
Sbjct: 399 GAEIKAIVSEAGLLALRER 417

---

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           IDEA+ R  R  K+ ++PLP  D R  +L+ + ++  L++D+DL++IA  E+ +  +GAD
Sbjct: 390 IDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIA--EKMDGYSGAD 445

Query: 262 LASLVNEAAMAALEERCEFLAKGD--SSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKH 435
           + ++  +A+M A+  R + L   +       +L        F  AL KV  SV ++    
Sbjct: 446 ITNVCRDASMMAMRRRIQGLRPEEIRHIPKEELNQPSTPADFLLALQKVSKSVGKEDLVK 505

Query: 436 FDALSKKYSA 465
           + A  +++ +
Sbjct: 506 YMAWMEEFGS 515

---

>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 50.4 bits (119), Expect(2) = 7e-07
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDV-DLETIARREECNNLT 252
           D++D+A+LRPGRF +   +  P  + R AI   H     L+ ++ DL+           +
Sbjct: 498 DILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKN-RLAALTPGFS 556

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQR 429
           GAD+A++ NEAA+ A        A+ D        + +KL HFE A+ +V   V  + +
Sbjct: 557 GADIANVCNEAALIA--------ARSDE-------DAVKLNHFEQAIERVIGGVERKSK 600



 Score = 22.3 bits (46), Expect(2) = 7e-07
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q+LVE+DG      V V+  TN
Sbjct: 474 QMLVEMDGFTPADHVVVLAGTN 495

---

>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score = 51.6 bits (122), Expect(2) = 9e-07
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D++D A+LR GR  +K   P+P  + R  I++ H+ K  +S DV+ E +AR  +  +  
Sbjct: 300 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD--DFN 357

Query: 253 GADLASLVNEAAMAALEERCEFLAKGD---SSMSTDLTNKIKLQHF 381
           GA   ++  EA + AL      L   D     +      K  LQ++
Sbjct: 358 GAQCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYY 403



 Score = 20.8 bits (42), Expect(2) = 9e-07
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG      V VI ATN
Sbjct: 277 ELLNQLDGFQPTTQVKVIAATN 298

---

>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score = 52.8 bits (125), Expect = 9e-07
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = +1

Query: 10  LLNSMVQISVMVFMLLELRTX-IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK 186
           LLN M      V + + + T   D +D A+LRPGR  +K   PLP   ++  + +  T K
Sbjct: 282 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSK 341

Query: 187 KTLSEDVDLETIARREECNNLTGADLASLVNEAAMAALEE 306
             LS++VDLE    R +   ++ A++A++  EA M A+ +
Sbjct: 342 MNLSDEVDLEDYVSRPD--KISAAEIAAICQEAGMHAVRK 379

---

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D++D A+LRPGRF +   VPLP  + R  I + + +K     ++  + +A   E    +
Sbjct: 283 LDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTE--GFS 340

Query: 253 GADLASLVNEAAMAALEERCEFL-------------AKGDSSMSTDLTNK 363
           GA++ ++  EA   A+    +++             AK + + +TD T K
Sbjct: 341 GAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNKAKNTDRTEK 390



 Score = 23.5 bits (49), Expect(2) = 3e-06
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG      V +I ATN
Sbjct: 260 QLLAEIDGFKPLDNVKIIAATN 281

---

>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 26/77 (33%), Positives = 39/77 (50%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           D +D A+LRPGR  +K  +PLP    R+ I K HT K   + + D E   +  +     G
Sbjct: 331 DTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSD--GFNG 388

Query: 256 ADLASLVNEAAMAALEE 306
           AD+ +   EA   A+ +
Sbjct: 389 ADIRNCATEAGFFAIRD 405

---

>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog|
          Length = 413

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
 Frame = +1

Query: 10  LLNSMVQISVMVFMLLELRTX-IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK 186
           LLN M      V + + + T   D +D A+LRPGR  +K   PLP   ++  + +  T K
Sbjct: 287 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAK 346

Query: 187 KTLSEDVDLETIARREECNNLTGADLASLVNEAAMAALEE 306
             L ++VDLE    R +   ++ A++ ++  EA M A+ +
Sbjct: 347 MNLGDEVDLEDYVSRPD--KISAAEITAICQEAGMHAVRK 384

---

>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score = 47.4 bits (111), Expect(2) = 1e-05
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           +D++D A+LR GR  +K   P+P  + R  I++ H+ K  +S DV+ E +AR   C  ++
Sbjct: 319 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR---CPTIS 375

Query: 253 GADLASLVN-EAAMAAL 300
            A  A     EA M AL
Sbjct: 376 MALSAKQFGVEAGMIAL 392



 Score = 21.2 bits (43), Expect(2) = 1e-05
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           +LL +LDG      V VI ATN
Sbjct: 296 ELLNQLDGFQPNMQVKVIAATN 317

---

>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 45.1 bits (105), Expect(2) = 1e-05
 Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK----KTLSEDVDLETIARREECN 243
           DV+D A++RPGRF +   +  P  + R  I   H ++      L++D++  +        
Sbjct: 439 DVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTP 498

Query: 244 NLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQ 423
             TGAD+A+  NEAA+ A      +               I + HFE A+ +V   + ++
Sbjct: 499 GFTGADIANACNEAALIAARHNDPY---------------ITIHHFEQAIERVIAGLEKK 543

Query: 424 QR 429
            R
Sbjct: 544 TR 545



 Score = 23.1 bits (48), Expect(2) = 1e-05
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLLVE+DG      V V+  TN
Sbjct: 415 QLLVEMDGFTTSDQVVVLAGTN 436

---

>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKK-TLSEDVDLETIARREECNNLTGA 258
           +DEAVLR  RF K+ +V LP  + R+ +LK    K+ +     +L  +AR  +    +G+
Sbjct: 492 LDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTD--GYSGS 547

Query: 259 DLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKHF 438
           DL +L  +AA+  + E      K   +MS      I+L  F  +L K+K SVS Q  + +
Sbjct: 548 DLTALAKDAALGPIRELKPEQVK---NMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAY 604

Query: 439 DALSKKY 459
              +K +
Sbjct: 605 IRWNKDF 611

---

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKK-TLSEDVDLETIARREECNNLTGA 258
           +DEAVLR  RF K+ +V LP  + R+ +LK    K+ +     +L  +AR  +    +G+
Sbjct: 490 LDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTD--GYSGS 545

Query: 259 DLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKHF 438
           DL +L  +AA+  + E      K   +MS      I+L  F  +L K+K SVS Q  + +
Sbjct: 546 DLTALAKDAALGPIRELKPEQVK---NMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAY 602

Query: 439 DALSKKY 459
              +K +
Sbjct: 603 IRWNKDF 609

---

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +1

Query: 49  MLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSED-VDLETIA 225
           M++     I+ ID+A LR  R  K+  V LPG+D+R  IL    +   L ED  DL+ IA
Sbjct: 230 MIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIA 287

Query: 226 RREECNNLTGADLASLVNEAAMAALEE 306
             +     +G+DL  L  EAA+ A +E
Sbjct: 288 --DNTKGFSGSDLKELCREAALDAAKE 312

---

>SAP1_YEAST (P39955) Protein SAP1|
          Length = 897

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
 Frame = +1

Query: 82   IDEAVLRPGRFGKKHFVPLPGADERVAILKA--HTEKKTLSEDVDLETIARREECNNLTG 255
            IDEA  R  RF ++ ++PLP    R    K     +K TL+E  D + + +  E    +G
Sbjct: 774  IDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTES-DFDELVKITE--GYSG 828

Query: 256  ADLASLVNEAAMAALEERCEFLAKGDSSMST--DLTNKIKLQHFEHALSKVKPSVSEQQR 429
            +D+ SL  +AAM  L +       GD  + T  ++   I L  F+++L  +KPSVS+   
Sbjct: 829  SDITSLAKDAAMGPLRD------LGDKLLETEREMIRPIGLVDFKNSLVYIKPSVSQDGL 882

Query: 430  KHFDALSKKYSAN 468
              ++  + ++ ++
Sbjct: 883  VKYEKWASQFGSS 895

---

>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)|
          Length = 890

 Score = 38.1 bits (87), Expect(2) = 2e-04
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEK-KTLSEDVDLETIARREECNNL 249
           I+ +D+A++RPGRF ++     P  +ER  IL+      K L +D     +A R     L
Sbjct: 511 IETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVDDTTKTMMAERS--IGL 568

Query: 250 TGADLASLV-NEAAMAALEER 309
            G DL  L  N   ++ALE R
Sbjct: 569 NGCDLRLLADNILLLSALESR 589



 Score = 25.8 bits (55), Expect(2) = 2e-04
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           Q L+ +DG  +R+ + +IGATN
Sbjct: 488 QFLIYMDGYKKRNDLIIIGATN 509

---

>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 29/99 (29%), Positives = 44/99 (44%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLT 252
           ID +   +LR GRF +  F+ LP   ER  I K H +K         +T     + N  +
Sbjct: 386 IDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFS 445

Query: 253 GADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIK 369
           GA++   + EA   A  E  EF        ++D+ N +K
Sbjct: 446 GAEIEESIYEAMHIAFNENREF-------TTSDILNSLK 477

---

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 28/110 (25%), Positives = 52/110 (47%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           +D A++R  R   +  +  P   +R AILK   + + +   VDL  +A  +E +  +G+D
Sbjct: 243 LDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA--QETDGFSGSD 298

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPS 411
           L  +  +AA+  + E     +  + S   D    ++ Q    A+ K+K S
Sbjct: 299 LKEMCRDAALLCVREYVN--STSEESHDEDEIRPVQQQDLHRAIEKMKKS 346

---

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 28/110 (25%), Positives = 52/110 (47%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           +D A++R  R   +  +  P   +R AILK   + + +   VDL  +A  +E +  +G+D
Sbjct: 243 LDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA--QETDGFSGSD 298

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPS 411
           L  +  +AA+  + E     +  + S   D    ++ Q    A+ K+K S
Sbjct: 299 LKEMCRDAALLCVREYVN--STSEESHDEDEIRPVQQQDLHRAIEKMKKS 346

---

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 28/110 (25%), Positives = 52/110 (47%)
 Frame = +1

Query: 82  IDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGAD 261
           +D A++R  R   +  +  P   +R AILK   + + +   VDL  +A  +E +  +G+D
Sbjct: 243 LDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA--QETDGFSGSD 298

Query: 262 LASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPS 411
           L  +  +AA+  + E     +  + S   D    ++ Q    A+ K+K S
Sbjct: 299 LKEMCRDAALLCVREYVN--STSEESHDEDEIRPVQQQDLHRAIEKMKKS 346

---

>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)|
          Length = 69

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARR 231
           DV+D A++RPGRF ++ +   P    R +I K H     L + ++ +T+AR+
Sbjct: 11  DVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLARK 62

---

>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
 Frame = +1

Query: 79  VIDEAVLRPGRFGKKHFVPLPGADERVAILKAH--TEKKTLSEDVDLETIARREECNNLT 252
           V+D A+ R  RF K+ ++PLP    R A+ K H  T + +L+E  D   + R+ +    +
Sbjct: 283 VLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTE-ADFRELGRKTD--GYS 337

Query: 253 GADLASLVNEAAM 291
           GAD++ +V +A M
Sbjct: 338 GADISIIVRDALM 350

---

>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 29.3 bits (64), Expect(2) = 0.015
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 6   LLVELDGADQRHGVYVIGATN 68
           LL E+DG +Q  GV  IGATN
Sbjct: 248 LLTEMDGINQNWGVVTIGATN 268



 Score = 28.5 bits (62), Expect(2) = 0.015
 Identities = 23/108 (21%), Positives = 49/108 (45%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTG 255
           +++D A+    RF ++    LPG DER  +L+ + E   L  D  ++ + +  +   ++G
Sbjct: 271 ELLDNAIR--SRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTK--GMSG 326

Query: 256 ADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSK 399
            D+   V + A+                   D + +++ +H E+AL +
Sbjct: 327 RDIKERVLKTAL--------------HRALADESPRVEREHIEYALKE 360

---

>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 37.7 bits (86), Expect = 0.031
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = +1

Query: 73  IDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTE--KKTLSEDVDLETIARREECNN 246
           +D++   ++R GRF +  F+ LP  +ER  I K H +  +    +  D + +A+  E  +
Sbjct: 370 VDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSE--S 427

Query: 247 LTGADLASLVNEAAMAALEERCEF 318
            +GA++   + EA   A +++ EF
Sbjct: 428 FSGAEIRQSIIEAMYQAFDQQREF 451

---

>HEM1_SYNPX (Q7U769) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 432

 Score = 37.7 bits (86), Expect = 0.031
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
 Frame = +1

Query: 79  VIDEAVLRP-GRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVD--LETIARREECNNL 249
           +ID A L P  R  K   + + G    +A   A  +    S DVD   E +AR +E    
Sbjct: 268 IIDAARLEPLNRRSKLRLIDI-GVPRNIAADAAAVDGVE-SHDVDDLQEVVARNQEARQA 325

Query: 250 TGADLASLVNEAAMAALE-----ERCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSV 414
              +   L+ + A   LE     E    + +  SSM T     I+++  + ALS++ P  
Sbjct: 326 MAREAEQLLQQEAQQFLEWWDSLEAVPTINRLRSSMET-----IRVEELQKALSRMGPDF 380

Query: 415 SEQQRKHFDALSK 453
           S ++RK  +ALSK
Sbjct: 381 SARERKVVEALSK 393

---

>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)|
          Length = 491

 Score = 36.2 bits (82), Expect = 0.089
 Identities = 25/92 (27%), Positives = 40/92 (43%)
 Frame = +1

Query: 43  VFMLLELRTXIDVIDEAVLRPGRFGKKHFVPLPGADERVAILKAHTEKKTLSEDVDLETI 222
           VF++    T I  +   +LR GRF +  F+ LP  +ER  I + H  +       +    
Sbjct: 361 VFVVATANT-IQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIHLARIRPKSWQNYNIK 419

Query: 223 ARREECNNLTGADLASLVNEAAMAALEERCEF 318
                CN  +GA++   + E+   A  E  EF
Sbjct: 420 QLSLLCNKFSGAEIEQAIVESMHTAFSEEREF 451

---

>HEM1_PROMA (Q7VCA1) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 437

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +1

Query: 202 DVD--LETIARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQ 375
           DVD   E +AR ++       +  +L++E A   LE      A    +        I+ +
Sbjct: 309 DVDDLQEVVARNQDARQQIAIEAQNLIDEEARVFLEWWASLEAVPTINRLRSNLESIRKE 368

Query: 376 HFEHALSKVKPSVSEQQRKHFDALSK 453
             + ALS++ P  S ++RK  +ALSK
Sbjct: 369 ELQKALSRMGPDFSARERKVVEALSK 394

---

>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c|
          Length = 609

 Score = 26.9 bits (58), Expect(2) = 0.31
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGAD 150
           D+ID A+LRPGR   K  +  P A+
Sbjct: 419 DMIDPAILRPGRLDVKIKIERPDAE 443



 Score = 26.2 bits (56), Expect(2) = 0.31
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +    V VIGA+N
Sbjct: 395 QLLSEIDGVEGLENVIVIGASN 416

---

>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175|
          Length = 609

 Score = 26.9 bits (58), Expect(2) = 0.31
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGAD 150
           D+ID A+LRPGR   K  +  P A+
Sbjct: 419 DMIDPAILRPGRLDVKIKIERPDAE 443



 Score = 26.2 bits (56), Expect(2) = 0.31
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +    V VIGA+N
Sbjct: 395 QLLSEIDGVEGLENVIVIGASN 416

---

>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316|
          Length = 609

 Score = 26.9 bits (58), Expect(2) = 0.31
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 76  DVIDEAVLRPGRFGKKHFVPLPGAD 150
           D+ID A+LRPGR   K  +  P A+
Sbjct: 419 DMIDPAILRPGRLDVKIKIERPDAE 443



 Score = 26.2 bits (56), Expect(2) = 0.31
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 3   QLLVELDGADQRHGVYVIGATN 68
           QLL E+DG +    V VIGA+N
Sbjct: 395 QLLSEIDGVEGLENVIVIGASN 416

---

>HEM1_PROMM (Q7V809) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 436

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
 Frame = +1

Query: 196 SEDVD--LETIARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNK-- 363
           S DVD   E ++R +E           +  EA +   EE   FL   DS  +    N+  
Sbjct: 306 SHDVDDLHEVVSRNQEARQ-------QMAKEAEVVLQEETRLFLEWWDSLEAVPTINRLR 358

Query: 364 -----IKLQHFEHALSKVKPSVSEQQRKHFDALSK 453
                I+ +  + ALS++ P  S ++RK  +ALSK
Sbjct: 359 ATLEAIRAEELQKALSRMGPDFSARERKVVEALSK 393

---

>VIME_CYPCA (Q92155) Vimentin|
          Length = 455

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
 Frame = +1

Query: 193 LSEDVDLETIARREECNNLTG-------ADLASLVNEAAMAALEERCEFLAKGDSSMSTD 351
           L E +  E + R +  N L G       A LA L  E  + +L+E   FL K       +
Sbjct: 176 LKEKLQEEMLQREDAENTLRGFRQDVDNASLARLHLETKVESLQEEIAFLKKLHDEELAE 235

Query: 352 LTNKIKLQHFEHALSKVKPSVS---EQQRKHFDALSKK 456
           L  +I+ QH +  +   KP ++   +  R+ ++ L+ +
Sbjct: 236 LQIQIQEQHVQIDMEVAKPDLTAALKDVRQQYETLASR 273

---

>HEM1_PROMP (Q7V1T7) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 433

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
 Frame = +1

Query: 166 LKAHTEKKTLSEDVDLETIARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMS 345
           +K H   ++   D   E ++R +E       +  SLV +       ER  FL    S  +
Sbjct: 298 VKHHAFIESFDVDDLEEVVSRNQEFRQKIAKEAESLVKD-------ERIIFLEWWASLEA 350

Query: 346 TDLTNK-------IKLQHFEHALSKVKPSVSEQQRKHFDALSK 453
             + NK       I+ +  + ALS++ P  S ++RK  +AL+K
Sbjct: 351 VPVINKLRSDLELIRKEELQKALSRMGPDFSARERKVVEALTK 393

---

>DAX1_RAT (P70503) Nuclear receptor 0B1 (Nuclear receptor DAX-1)|
          Length = 472

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -3

Query: 188 FFSVCAFNIATRSSAPGKGTKCFFPNLPGRRTASSITSIXVRS 60
           FF   + NI T+  A  KGT  F P+LPG +    I S+  R+
Sbjct: 367 FFKCWSLNIDTKEYAYLKGTVLFNPDLPGLQCVKYIESLQWRT 409

---

>RS7_LEGPL (Q5WZL6) 30S ribosomal protein S7|
          Length = 175

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 262 LASLVNEAAMAALEERCEFLAKGD---SSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRK 432
           +A  +   A++ +EER + + K +   S   +  +    L++FE AL  V+PSV  + R+
Sbjct: 38  IAEKITYGALSVMEERVKKIKKNEEDGSETGSSGSAGAVLRYFEEALDNVRPSVEVRSRR 97

---

>RS7_LEGPH (Q5ZYP7) 30S ribosomal protein S7|
          Length = 175

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 262 LASLVNEAAMAALEERCEFLAKGD---SSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRK 432
           +A  +   A++ +EER + + K +   S   +  +    L++FE AL  V+PSV  + R+
Sbjct: 38  IAEKITYGALSVMEERVKKIKKNEEDGSETGSSGSAGAVLRYFEEALDNVRPSVEVRSRR 97

---

>RS7_LEGPA (Q5X863) 30S ribosomal protein S7|
          Length = 175

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 262 LASLVNEAAMAALEERCEFLAKGD---SSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRK 432
           +A  +   A++ +EER + + K +   S   +  +    L++FE AL  V+PSV  + R+
Sbjct: 38  IAEKITYGALSVMEERVKKIKKNEEDGSETGSSGSAGAVLRYFEEALDNVRPSVEVRSRR 97

---

>VIME_BOVIN (P48616) Vimentin|
          Length = 465

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
 Frame = +1

Query: 169 KAHTEKKTLSEDVDL------ETIARREECNN--------LTGADLASLVNEAAMAALEE 306
           +A  E+  L+ED+        E + +REE  +        +  A LA L  E  + +L+E
Sbjct: 169 RAEVERHNLAEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQE 228

Query: 307 RCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS---EQQRKHFDALSKK 456
              FL K   +   +L  +I+ QH +  +   KP ++      R+ +++++ K
Sbjct: 229 EIAFLKKLHDAEIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAK 281

---

>CLPB_STRMU (Q8DTC7) Chaperone clpB|
          Length = 860

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 358 NKIKLQHFEHALSKVKPSVSEQQRKHFDALSKKYSAN 468
           NK KL    H + K KP++S  Q   +DAL +KY+ N
Sbjct: 134 NKEKLYQKMHRIRKGKPAISSSQETIYDAL-EKYAVN 169

---

>P53_BRARE (P79734) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 373

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 41/166 (24%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
 Frame = +1

Query: 1   TSYLLNSMVQISVMVFMLLELRTXIDVIDEAVLRPGRFGKKHF----VPLPGADERVAIL 168
           T+ LLN M   S M  M    R  + +I          G++ F       PG D +    
Sbjct: 198 TTVLLNYMCNSSCMGGM--NRRPILTIITLETQEGQLLGRRSFEVRVCACPGRDRK---- 251

Query: 169 KAHTEKKTLSEDVDLETIARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMST 348
              TE+    +D + +T+A+       T     SLV E++ A L       AKG SS   
Sbjct: 252 ---TEESNFKKDQETKTMAKT------TTGTKRSLVKESSSATLRPEGSKKAKGSSSDEE 302

Query: 349 DLTNKIKLQHFEHALSKVKPSV----------SEQQRKHFDALSKK 456
             T +++ +     L K+  S+          +E+ R+ F   +KK
Sbjct: 303 IFTLQVRGRERYEILKKLNDSLELSDVVPASDAEKYRQKFMTKNKK 348

---

>VIME_PANTR (Q5R1W8) Vimentin|
          Length = 465

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
 Frame = +1

Query: 169 KAHTEKKTLSEDVDL------ETIARREECNN--------LTGADLASLVNEAAMAALEE 306
           +   E+  L+ED+        E + +REE  N        +  A LA L  E  + +L+E
Sbjct: 169 RVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQE 228

Query: 307 RCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS---EQQRKHFDALSKK 456
              FL K       +L  +I+ QH +  +   KP ++      R+ +++++ K
Sbjct: 229 EIAFLKKLHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAK 281

---

>VIME_MACFA (Q4R4X4) Vimentin|
          Length = 465

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
 Frame = +1

Query: 169 KAHTEKKTLSEDVDL------ETIARREECNN--------LTGADLASLVNEAAMAALEE 306
           +   E+  L+ED+        E + +REE  N        +  A LA L  E  + +L+E
Sbjct: 169 RVEVERDNLTEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQE 228

Query: 307 RCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS---EQQRKHFDALSKK 456
              FL K       +L  +I+ QH +  +   KP ++      R+ +++++ K
Sbjct: 229 EIAFLKKLHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAK 281

---

>VIME_HUMAN (P08670) Vimentin|
          Length = 465

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
 Frame = +1

Query: 169 KAHTEKKTLSEDVDL------ETIARREECNN--------LTGADLASLVNEAAMAALEE 306
           +   E+  L+ED+        E + +REE  N        +  A LA L  E  + +L+E
Sbjct: 169 RVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQE 228

Query: 307 RCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS---EQQRKHFDALSKK 456
              FL K       +L  +I+ QH +  +   KP ++      R+ +++++ K
Sbjct: 229 EIAFLKKLHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAK 281

---

>VIME_CERAE (P84198) Vimentin|
          Length = 465

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
 Frame = +1

Query: 169 KAHTEKKTLSEDVDL------ETIARREECNN--------LTGADLASLVNEAAMAALEE 306
           +   E+  L+ED+        E + +REE  N        +  A LA L  E  + +L+E
Sbjct: 169 RVEVERDNLTEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQE 228

Query: 307 RCEFLAKGDSSMSTDLTNKIKLQHFEHALSKVKPSVS---EQQRKHFDALSKK 456
              FL K       +L  +I+ QH +  +   KP ++      R+ +++++ K
Sbjct: 229 EIAFLKKLHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAK 281

---

>SMY1_YEAST (P32364) Kinesin-related protein SMY1 (Suppressor protein SMY1)|
          Length = 656

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = +1

Query: 124 HFVPLPGADERVAILKAHTEKKTLSEDVDLETIARREECNNLTGADLASLVNEAAMAALE 303
           H   LP  DE+  +   +T+K+ +   + L++I +    ++ T  D  + ++E     L 
Sbjct: 413 HNKSLPEDDEKKML--ENTKKENIKLKLQLDSITQL--LSSSTNEDPNNRIDEEVSEILT 468

Query: 304 ERCEFLAKGDSSMSTDLTNKIKL-QHFEHALSK 399
           +RCE +A+ + S    + +  KL Q  E+  SK
Sbjct: 469 KRCEQIAQLELSFDRQMNSNSKLQQELEYKKSK 501

---

>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)|
           (Glutamic--pyruvic transaminase 2) (Glutamic--alanine
           transaminase 2) (ALAAT-2)
          Length = 482

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +1

Query: 220 IARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSK 399
           IA    C+N+TG  LASLV     A+ E    + A+ D  +++ L  + K    EHA +K
Sbjct: 328 IASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILAS-LARRAKA--LEHAFNK 384

Query: 400 VK 405
           ++
Sbjct: 385 LE 386

---

>BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain protein 1B|
            (Williams-Beuren syndrome chromosome region 9 protein
            homolog) (WBRS9)
          Length = 1479

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
 Frame = +1

Query: 151  ERVAILKAHTEKKTLSEDVDLETIARREECNNLTGADLASLVNEAAMAALEERCEFLA-- 324
            ER+A+LK   +KK   +    E  AR +E N      L  +  +  +  +E++ E  A  
Sbjct: 780  ERLAVLKEENDKKRAEKQKRKEMEARNKE-NGKEENVLGKVDRKKEIVKIEQQVEVEADD 838

Query: 325  -----KGDSSMSTDLTNKIKLQHFEHALSKVKPSVSEQQRKHFDALSKKYSAN*SIA--V 483
                 K    +S     K ++Q  E  +   + +  E+ RKH  A  K +    + A  V
Sbjct: 839  MISAVKSRRLLSMQAKRKREIQERETKVRLEREAEEERMRKHKAAAEKAFQEGIAKAKLV 898

Query: 484  LTRT 495
            L RT
Sbjct: 899  LRRT 902

---

>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)|
          Length = 373

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 14/144 (9%)
 Frame = -3

Query: 425 CCSDTEGFTLDRACSKCCSFILLVK-------SVLIDESP-------FARNSHLSSNAAM 288
           C  D      D +C+  C+   + K       SV +DES         A++SH S++ A 
Sbjct: 64  CGDDVPSDNPDGSCTTSCTGYPMEKCGGSDSYSVYVDESEENDDDSSSAQSSHSSTDDAT 123

Query: 287 AASFTSDARSAPVRLLHSSRRAIVSKSTSSERVFFSVCAFNIATRSSAPGKGTKCFFPNL 108
           + S TS   S+    L SS  +  SK +SS +        +  T SS     T       
Sbjct: 124 STSSTSTTSSSS-SSLSSSSTSSSSKQSSSPQSSTMSSTDSSPTSSSLSASST------- 175

Query: 107 PGRRTASSITSIXVRSSNNINTMT 36
               T SSI+S     S++ ++ T
Sbjct: 176 ----TTSSISSFSFSQSSSSSSTT 195

---

>RS7_THICU (O50564) 30S ribosomal protein S7|
          Length = 156

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +1

Query: 220 IARREECNNLTGADLASLVNEAAMAALEERCEFLAKGDSSMSTDLTNKIKLQHFEHALSK 399
           I R  +  NL   D+A  +N   ++  +   E +  G      + T K  ++ F  ALS 
Sbjct: 12  ILREPKFGNL---DVAKFMNVVMLSGKKSIAESIVYGAFEAIQNKTGKDPIEIFSQALSN 68

Query: 400 VKPSVSEQQRK 432
           VKP V  + R+
Sbjct: 69  VKPMVEVKSRR 79

---

>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch|
           3) [Contains: Notch 3 extracellular truncation; Notch 3
           intracellular domain]
          Length = 2321

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 428 GNTSTRCQRNIQPTDPSPCLQGPYC 502
           G T   C ++I   DP+PCL G  C
Sbjct: 840 GYTGPSCDQDINDCDPNPCLNGGSC 864

---

>SERR_DROME (P18168) Serrate protein precursor (Protein beaded)|
          Length = 1404

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 428 GNTSTRCQRNIQPTDPSPCLQGPYC 502
           G+T T C+ N+    P+PC  G  C
Sbjct: 786 GHTGTFCEHNLNECSPNPCRNGGIC 810

---

>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch|
           3) [Contains: Notch 3 extracellular truncation; Notch 3
           intracellular domain]
          Length = 2318

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 425 KGNTSTRCQRNIQPTDPSPCLQGPYC 502
           +G T   C ++I   DP+PCL G  C
Sbjct: 840 RGYTGPFCDQDIDDCDPNPCLHGGSC 865


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,424,203
Number of Sequences: 219361
Number of extensions: 1744879
Number of successful extensions: 5987
Number of sequences better than 10.0: 229
Number of HSP's better than 10.0 without gapping: 5291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5855
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---