ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6i23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196525.1| Oryza sativa (japonica cultivar-group) putative... 234 3e-58
2dbj|AK071316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 7e-56
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
4gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb00... 127 5e-26
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 127 5e-26
6ref|XM_845973.1| PREDICTED: Canis familiaris similar to membrane... 46 0.14
7emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on ch... 46 0.14
8gb|M20301.1|TMECG Theiler murine encephalomyelitis virus, comple... 44 0.56
9ref|NM_189523.2| Oryza sativa (japonica cultivar-group), mRNA 42 2.2
10ref|XM_501927.1| Yarrowia lipolytica CLIB122, YALI0C16973g predi... 42 2.2
11ref|NM_001031089.1| Gallus gallus similar to Expressed sequence ... 42 2.2
12emb|AJ719891.1| Gallus gallus mRNA for hypothetical protein, clo... 42 2.2
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
14dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
15dbj|AK120458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
16dbj|AK067702.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
17emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 2.2
18gb|AC165074.2| Mus musculus BAC clone RP24-501F1 from chromosome... 40 8.8
19gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome... 40 8.8
20gb|AC151982.4| Mus musculus BAC clone RP23-445J16 from chromosom... 40 8.8
21gb|AC139325.4| Mus musculus BAC clone RP24-373O11 from chromosom... 40 8.8
22gb|AC126693.3| Mus musculus BAC clone RP23-247E23 from chromosom... 40 8.8
23ref|XM_781207.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.8
24emb|BX062381.1|CNS09KAP Single read from an extremity of a full-... 40 8.8
25emb|BX062380.1|CNS09KAO Single read from an extremity of a full-... 40 8.8
26emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 40 8.8
27gb|AC087407.27| Homo sapiens 3 BAC CTC-269B10 (CalTech Clone Lib... 40 8.8
28gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, comp... 40 8.8
29gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosom... 40 8.8
30dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CC... 40 8.8
31gb|AC157599.3| Mus musculus BAC clone RP23-138L13 from chromosom... 40 8.8
32gb|AC007320.3|AC007320 Homo sapiens BAC clone RP11-477B5 from Y,... 40 8.8
33ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 8.8
34gb|AC008041.5| Homo sapiens 3 BAC RPCI11-469J4 (Roswell Park Can... 40 8.8
35dbj|AP006274.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-2... 40 8.8
36dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-3... 40 8.8
37ref|XM_308204.2| Anopheles gambiae str. PEST ENSANGP00000021556 ... 40 8.8
38gb|AC155271.1| Mus musculus BAC clone RP23-204F12 from 16, compl... 40 8.8
39gb|AC102854.12| Mus musculus chromosome 3, clone RP24-493E20, co... 40 8.8
40dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.8
41gb|AC101890.9| Mus musculus chromosome 1, clone RP23-467L1, comp... 40 8.8
42gb|AE000512.1| Thermotoga maritima MSB8, complete genome 40 8.8
43gb|AF008243.1|AF008243 Homo sapiens cosmid clone C102H1064 from ... 40 8.8
44gb|AC026191.4| Homo sapiens chromosome 3 clone RP11-380O24 map 3... 40 8.8
45emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chr... 40 8.8
46gb|AC018506.5| Homo sapiens chromosome 3 clone RP11-58B17 map 3p... 40 8.8
47dbj|AP000160.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 40 8.8
48dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 40 8.8
49dbj|AP001417.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB... 40 8.8 
>ref|NM_196525.1| Oryza sativa (japonica cultivar-group) putative heat shock protein
           (OSJNBa0006I13.12), mRNA
          Length = 555

 Score =  234 bits (118), Expect = 3e-58
 Identities = 349/426 (81%)
 Strand = Plus / Plus

                                                                       
Query: 84  aagagattggcgtgttatattggcatttggacccaaagaagtccgaaagtgaacaagagc 143
           ||||||| || ||||| |||||||| ||||| || |||||||| ||||| ||| ||||||
Sbjct: 89  aagagatcggtgtgttgtattggcacttggatcctaagaagtctgaaagcgaagaagagc 148

                                                                       
Query: 144 tagcgaaaatccgcaaagacaagggatacagctacatggattatctggatatatgccctg 203
           |  | |||||||||| ||| |  |||||||||||| | |||  |   || ||||||||||
Sbjct: 149 tcacaaaaatccgcagagaaagaggatacagctactttgatcttactgagatatgccctg 208

                                                                       
Query: 204 gaaagttggcaaactttgaggagaagctcaagaatttcttcacagagcacatgcatgccg 263
             || |||| ||| | |||||||||||| ||||  ||||     |||||||| ||||| |
Sbjct: 209 ataaattggaaaattatgaggagaagctgaagagcttctattgtgagcacattcatgctg 268

                                                                       
Query: 264 acgaagagatccgctactgcttggaaggcggcgggtattttgatgtgcgcgacaaggatg 323
           | ||||||||||| ||||||||||| ||  |||| || |||||||| || ||||||||||
Sbjct: 269 atgaagagatccggtactgcttggagggtagcggttactttgatgtccgtgacaaggatg 328

                                                                       
Query: 324 acaagtgggttcggatctggataaaagaaggggatatgatcgtgctgccggctggaattt 383
           |||| ||| ||||||| ||||||||||| || || |||||| | ||||| ||||| ||||
Sbjct: 329 acaaatggattcggatttggataaaagagggagacatgatcatcctgccagctgggattt 388

                                                                       
Query: 384 atcatcggttcaccctcgacgccgccaaccatgtgaagctcatgaggctcttcctcggag 443
           |||||||||||| | |||||  |  |||| || | |||||||||||||||||| | ||||
Sbjct: 389 atcatcggttcatcgtcgacagcaacaactatatcaagctcatgaggctcttcattggag 448

                                                                       
Query: 444 aaccagtgtggaccgcccacaaccggcctcaggaggaccatccggtgcggcaagagtatg 503
           ||||||| ||||||||  |||||||||| ||||| |||||||| ||| ||||||||||||
Sbjct: 449 aaccagtctggaccgcatacaaccggccacaggaagaccatcctgtgaggcaagagtatg 508

                 
Query: 504 tcaaga 509
           ||||||
Sbjct: 509 tcaaga 514
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>dbj|AK071316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083J21, full
           insert sequence
          Length = 1125

 Score =  226 bits (114), Expect = 7e-56
 Identities = 348/426 (81%)
 Strand = Plus / Plus

                                                                       
Query: 84  aagagattggcgtgttatattggcatttggacccaaagaagtccgaaagtgaacaagagc 143
           ||||||| || ||||| |||||||| ||||| || |||||||| ||||| ||| ||||||
Sbjct: 365 aagagatcggtgtgttgtattggcacttggatcctaagaagtctgaaagcgaagaagagc 424

                                                                       
Query: 144 tagcgaaaatccgcaaagacaagggatacagctacatggattatctggatatatgccctg 203
           |  | |||||||||| ||| |  || ||||||||| | |||  |   || ||||||||||
Sbjct: 425 tcacaaaaatccgcagagaaagagggtacagctactttgatcttactgagatatgccctg 484

                                                                       
Query: 204 gaaagttggcaaactttgaggagaagctcaagaatttcttcacagagcacatgcatgccg 263
             || |||| ||| | |||||||||||| ||||  ||||     |||||||| ||||| |
Sbjct: 485 ataaattggaaaattatgaggagaagctgaagagcttctattgtgagcacattcatgctg 544

                                                                       
Query: 264 acgaagagatccgctactgcttggaaggcggcgggtattttgatgtgcgcgacaaggatg 323
           | ||||||||||| ||||||||||| ||  |||| || |||||||| || ||||||||||
Sbjct: 545 atgaagagatccggtactgcttggagggtagcggttactttgatgtccgtgacaaggatg 604

                                                                       
Query: 324 acaagtgggttcggatctggataaaagaaggggatatgatcgtgctgccggctggaattt 383
           |||| ||| ||||||| ||||||||||| || || |||||| | ||||| ||||| ||||
Sbjct: 605 acaaatggattcggatttggataaaagagggagacatgatcatcctgccagctgggattt 664

                                                                       
Query: 384 atcatcggttcaccctcgacgccgccaaccatgtgaagctcatgaggctcttcctcggag 443
           |||||||||||| | |||||  |  |||| || | |||||||||||||||||| | ||||
Sbjct: 665 atcatcggttcatcgtcgacagcaacaactatatcaagctcatgaggctcttcattggag 724

                                                                       
Query: 444 aaccagtgtggaccgcccacaaccggcctcaggaggaccatccggtgcggcaagagtatg 503
           ||||||| ||||||||  |||||||||| ||||| |||||||| ||| ||||||||||||
Sbjct: 725 aaccagtctggaccgcatacaaccggccacaggaagaccatcctgtgaggcaagagtatg 784

                 
Query: 504 tcaaga 509
           ||||||
Sbjct: 785 tcaaga 790
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  127 bits (64), Expect = 5e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                            
Query: 248      gagcacatgcatgccgacgaagagatccgctactgcttggaaggcggcgggtattttgat 307
                |||||||| ||||| || ||||||||||| ||||||||||| ||  |||| || ||||||
Sbjct: 14244108 gagcacattcatgctgatgaagagatccggtactgcttggagggtagcggttactttgat 14244049

                                                                            
Query: 308      gtgcgcgacaaggatgacaagtgggttcggatctggataaaagaaggggatatgatcgtg 367
                || || |||||||||||||| ||| ||||||| ||||||||||| || || |||||| | 
Sbjct: 14244048 gtccgtgacaaggatgacaaatggattcggatttggataaaagagggagacatgatcatc 14243989

                                            
Query: 368      ctgccggctggaatttatcatcggttca 395
                ||||| ||||| ||||||||||||||||
Sbjct: 14243988 ctgccagctgggatttatcatcggttca 14243961



 Score =  107 bits (54), Expect = 4e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                            
Query: 420      agctcatgaggctcttcctcggagaaccagtgtggaccgcccacaaccggcctcaggagg 479
                ||||||||||||||||| | ||||||||||| ||||||||  |||||||||| ||||| |
Sbjct: 14243379 agctcatgaggctcttcattggagaaccagtctggaccgcatacaaccggccacaggaag 14243320

                                              
Query: 480      accatccggtgcggcaagagtatgtcaaga 509
                ||||||| ||| ||||||||||||||||||
Sbjct: 14243319 accatcctgtgaggcaagagtatgtcaaga 14243290



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                            
Query: 85       agagattggcgtgttatattggcatttggacccaaagaagtccgaaagtgaacaagagct 144
                |||||| || ||||| |||||||| ||||| || |||||||| ||||| ||| |||||||
Sbjct: 14244362 agagatcggtgtgttgtattggcacttggatcctaagaagtctgaaagcgaagaagagct 14244303

                                                  
Query: 145      agcgaaaatccgcaaagacaagggatacagctac 178
                  | |||||||||| ||| |  ||||||||||||
Sbjct: 14244302 cacaaaaatccgcagagaaagaggatacagctac 14244269
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>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
              complete sequence
          Length = 142737

 Score =  127 bits (64), Expect = 5e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                          
Query: 248    gagcacatgcatgccgacgaagagatccgctactgcttggaaggcggcgggtattttgat 307
              |||||||| ||||| || ||||||||||| ||||||||||| ||  |||| || ||||||
Sbjct: 116181 gagcacattcatgctgatgaagagatccggtactgcttggagggtagcggttactttgat 116122

                                                                          
Query: 308    gtgcgcgacaaggatgacaagtgggttcggatctggataaaagaaggggatatgatcgtg 367
              || || |||||||||||||| ||| ||||||| ||||||||||| || || |||||| | 
Sbjct: 116121 gtccgtgacaaggatgacaaatggattcggatttggataaaagagggagacatgatcatc 116062

                                          
Query: 368    ctgccggctggaatttatcatcggttca 395
              ||||| ||||| ||||||||||||||||
Sbjct: 116061 ctgccagctgggatttatcatcggttca 116034



 Score =  107 bits (54), Expect = 4e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                          
Query: 420    agctcatgaggctcttcctcggagaaccagtgtggaccgcccacaaccggcctcaggagg 479
              ||||||||||||||||| | ||||||||||| ||||||||  |||||||||| ||||| |
Sbjct: 115452 agctcatgaggctcttcattggagaaccagtctggaccgcatacaaccggccacaggaag 115393

                                            
Query: 480    accatccggtgcggcaagagtatgtcaaga 509
              ||||||| ||| ||||||||||||||||||
Sbjct: 115392 accatcctgtgaggcaagagtatgtcaaga 115363



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                          
Query: 85     agagattggcgtgttatattggcatttggacccaaagaagtccgaaagtgaacaagagct 144
              |||||| || ||||| |||||||| ||||| || |||||||| ||||| ||| |||||||
Sbjct: 116435 agagatcggtgtgttgtattggcacttggatcctaagaagtctgaaagcgaagaagagct 116376

                                                
Query: 145    agcgaaaatccgcaaagacaagggatacagctac 178
                | |||||||||| ||| |  ||||||||||||
Sbjct: 116375 cacaaaaatccgcagagaaagaggatacagctac 116342
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  127 bits (64), Expect = 5e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                            
Query: 248      gagcacatgcatgccgacgaagagatccgctactgcttggaaggcggcgggtattttgat 307
                |||||||| ||||| || ||||||||||| ||||||||||| ||  |||| || ||||||
Sbjct: 14252350 gagcacattcatgctgatgaagagatccggtactgcttggagggtagcggttactttgat 14252291

                                                                            
Query: 308      gtgcgcgacaaggatgacaagtgggttcggatctggataaaagaaggggatatgatcgtg 367
                || || |||||||||||||| ||| ||||||| ||||||||||| || || |||||| | 
Sbjct: 14252290 gtccgtgacaaggatgacaaatggattcggatttggataaaagagggagacatgatcatc 14252231

                                            
Query: 368      ctgccggctggaatttatcatcggttca 395
                ||||| ||||| ||||||||||||||||
Sbjct: 14252230 ctgccagctgggatttatcatcggttca 14252203



 Score =  107 bits (54), Expect = 4e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                            
Query: 420      agctcatgaggctcttcctcggagaaccagtgtggaccgcccacaaccggcctcaggagg 479
                ||||||||||||||||| | ||||||||||| ||||||||  |||||||||| ||||| |
Sbjct: 14251621 agctcatgaggctcttcattggagaaccagtctggaccgcatacaaccggccacaggaag 14251562

                                              
Query: 480      accatccggtgcggcaagagtatgtcaaga 509
                ||||||| ||| ||||||||||||||||||
Sbjct: 14251561 accatcctgtgaggcaagagtatgtcaaga 14251532



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                            
Query: 85       agagattggcgtgttatattggcatttggacccaaagaagtccgaaagtgaacaagagct 144
                |||||| || ||||| |||||||| ||||| || |||||||| ||||| ||| |||||||
Sbjct: 14252604 agagatcggtgtgttgtattggcacttggatcctaagaagtctgaaagcgaagaagagct 14252545

                                                  
Query: 145      agcgaaaatccgcaaagacaagggatacagctac 178
                  | |||||||||| ||| |  ||||||||||||
Sbjct: 14252544 cacaaaaatccgcagagaaagaggatacagctac 14252511
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>ref|XM_845973.1| PREDICTED: Canis familiaris similar to membrane-type 1 matrix
           metalloproteinase cytoplasmic tail binding protein-1
           (LOC608836), partial mRNA
          Length = 764

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 269 gagatccgctactgcttggaaggcggcgggtattttgatgtgcgcgacaaggatgacaag 328
           ||||||||||||  |||||| ||| ||||||| || |||||||| ||||| || || |||
Sbjct: 160 gagatccgctacatcttggacggcagcgggtacttcgatgtgcgagacaaagacgagaag 219

              
Query: 329 tgg 331
           |||
Sbjct: 220 tgg 222
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>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the
              3' end of a novel gene (FLJ22153) and the 3' end of the
              gene for a novel protein (ortholog of rat putative four
              repeat ion channel), complete sequence
          Length = 181311

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 339    tctggataaaagaaggggatatg 361
              |||||||||||||||||||||||
Sbjct: 175410 tctggataaaagaaggggatatg 175388
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>gb|M20301.1|TMECG Theiler murine encephalomyelitis virus, complete genome
          Length = 8093

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 231  tcaagaatttcttcacagagca 252
            ||||||||||||||||||||||
Sbjct: 7340 tcaagaatttcttcacagagca 7361
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>ref|NM_189523.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1733

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 620  aaccatgttgtaatcttgaaa 640
            |||||||||||||||||||||
Sbjct: 1487 aaccatgttgtaatcttgaaa 1467
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>ref|XM_501927.1| Yarrowia lipolytica CLIB122, YALI0C16973g predicted mRNA
          Length = 1197

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 32  acggcgaggacctcaacaacc 52
           |||||||||||||||||||||
Sbjct: 539 acggcgaggacctcaacaacc 559
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>ref|NM_001031089.1| Gallus gallus similar to Expressed sequence AL024210 (LOC421918),
           mRNA
          Length = 2251

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 299 tattttgatgtgcgcgacaaggatgacaa 327
           ||||||||||| || ||||||||||||||
Sbjct: 348 tattttgatgttcgggacaaggatgacaa 376
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>emb|AJ719891.1| Gallus gallus mRNA for hypothetical protein, clone 7o8
          Length = 2251

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 299 tattttgatgtgcgcgacaaggatgacaa 327
           ||||||||||| || ||||||||||||||
Sbjct: 348 tattttgatgttcgggacaaggatgacaa 376
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 620     aaccatgttgtaatcttgaaa 640
               |||||||||||||||||||||
Sbjct: 4051131 aaccatgttgtaatcttgaaa 4051151
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>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 620   aaccatgttgtaatcttgaaa 640
             |||||||||||||||||||||
Sbjct: 17874 aaccatgttgtaatcttgaaa 17894
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>dbj|AK120458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105O22, full
            insert sequence
          Length = 2063

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 620  aaccatgttgtaatcttgaaa 640
            |||||||||||||||||||||
Sbjct: 1830 aaccatgttgtaatcttgaaa 1810
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>dbj|AK067702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N03, full
            insert sequence
          Length = 1734

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 620  aaccatgttgtaatcttgaaa 640
            |||||||||||||||||||||
Sbjct: 1488 aaccatgttgtaatcttgaaa 1468
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 32      acggcgaggacctcaacaacc 52
               |||||||||||||||||||||
Sbjct: 2399396 acggcgaggacctcaacaacc 2399376
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>gb|AC165074.2| Mus musculus BAC clone RP24-501F1 from chromosome 12, complete sequence
          Length = 166016

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    tctggatatatgccctggaaagtt 210
              ||||||||||||||| ||||||||
Sbjct: 147340 tctggatatatgcccaggaaagtt 147317
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>gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome 17, complete sequence
          Length = 198403

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   tctggatatatgccctggaaagtt 210
             ||||||||||||||| ||||||||
Sbjct: 38008 tctggatatatgcccaggaaagtt 38031
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>gb|AC151982.4| Mus musculus BAC clone RP23-445J16 from chromosome 12, complete sequence
          Length = 183898

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 187    tctggatatatgccctggaaagtt 210
              ||||||||||||||| ||||||||
Sbjct: 156954 tctggatatatgcccaggaaagtt 156977
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>gb|AC139325.4| Mus musculus BAC clone RP24-373O11 from chromosome 16, complete sequence
          Length = 155728

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 187    tctggatatatgccctggaaagtt 210
              ||||||||||||||| ||||||||
Sbjct: 142209 tctggatatatgcccaggaaagtt 142232
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>gb|AC126693.3| Mus musculus BAC clone RP23-247E23 from chromosome 16, complete sequence
          Length = 199505

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    tctggatatatgccctggaaagtt 210
              ||||||||||||||| ||||||||
Sbjct: 140251 tctggatatatgcccaggaaagtt 140228
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>ref|XM_781207.1| PREDICTED: Strongylocentrotus purpuratus similar to cytochrome
           P450, family 2, subfamily U, polypeptide 1 (LOC581193),
           mRNA
          Length = 1470

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 acgaagagatccgctactgc 283
           ||||||||||||||||||||
Sbjct: 857 acgaagagatccgctactgc 838
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>emb|BX062381.1|CNS09KAP Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC43CF04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 552

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 ttggcaaactttgaggagaa 228
           ||||||||||||||||||||
Sbjct: 539 ttggcaaactttgaggagaa 520
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>emb|BX062380.1|CNS09KAO Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC43CF04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 901

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ttggcaaactttgaggagaa 228
           ||||||||||||||||||||
Sbjct: 679 ttggcaaactttgaggagaa 698
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 450    tgtggaccgcccacaaccggcctcagga 477
              |||||||||||||| ||||||| |||||
Sbjct: 205158 tgtggaccgcccacgaccggccgcagga 205131
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>gb|AC087407.27| Homo sapiens 3 BAC CTC-269B10 (CalTech Clone Library C) complete
             sequence
          Length = 102326

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   taaaagaaggggatatgatc 364
             ||||||||||||||||||||
Sbjct: 82806 taaaagaaggggatatgatc 82825
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>gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, complete sequence
          Length = 198706

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tctctccaagctccaagaga 89
             ||||||||||||||||||||
Sbjct: 84523 tctctccaagctccaagaga 84504
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>gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosome 12, complete
             sequence
          Length = 203726

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 187   tctggatatatgccctggaaagtt 210
             ||||||||||||||| ||||||||
Sbjct: 24679 tctggatatatgcccaggaaagtt 24656
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>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7,
              LRRC2), complete cds, clone: 0475A03
          Length = 165558

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    tctggatatatgccctggaa 206
              ||||||||||||||||||||
Sbjct: 160488 tctggatatatgccctggaa 160469
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>gb|AC157599.3| Mus musculus BAC clone RP23-138L13 from chromosome 17, complete
           sequence
          Length = 185556

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 tctggatatatgccctggaaagtt 210
           ||||||||||||||| ||||||||
Sbjct: 311 tctggatatatgcccaggaaagtt 288
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>gb|AC007320.3|AC007320 Homo sapiens BAC clone RP11-477B5 from Y, complete sequence
          Length = 187894

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 224   gagaagctcaagaatttcttcaca 247
             |||||||||||| |||||||||||
Sbjct: 54661 gagaagctcaagtatttcttcaca 54638
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
              (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 224    gagaagctcaagaatttcttcaca 247
              |||||||||||| |||||||||||
Sbjct: 506062 gagaagctcaagtatttcttcaca 506039
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>gb|AC008041.5| Homo sapiens 3 BAC RPCI11-469J4 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178896

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 528   ctggtcatgctttggcagcacattgaag 555
             ||||||||||||||| ||||||| ||||
Sbjct: 26783 ctggtcatgctttggtagcacatagaag 26810
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>dbj|AP006274.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-217F13, chromosome 3,
             complete sequence
          Length = 178968

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    cctctctccaagctccaagagatt 91
             |||||||||||||| |||||||||
Sbjct: 87339 cctctctccaagcttcaagagatt 87362
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>dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-30J10, chromosome 3,
              complete sequence
          Length = 183435

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 68     cctctctccaagctccaagagatt 91
              |||||||||||||| |||||||||
Sbjct: 182133 cctctctccaagcttcaagagatt 182156
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>ref|XM_308204.2| Anopheles gambiae str. PEST ENSANGP00000021556
           (ENSANGG00000019067), partial mRNA
          Length = 1022

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ttggcaaactttgaggagaa 228
           ||||||||||||||||||||
Sbjct: 502 ttggcaaactttgaggagaa 521
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>gb|AC155271.1| Mus musculus BAC clone RP23-204F12 from 16, complete sequence
          Length = 204679

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    tctggatatatgccctggaaagtt 210
              ||||||||||||||| ||||||||
Sbjct: 167317 tctggatatatgcccaggaaagtt 167294
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>gb|AC102854.12| Mus musculus chromosome 3, clone RP24-493E20, complete sequence
          Length = 133271

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    tctctccaagctccaagaga 89
             ||||||||||||||||||||
Sbjct: 31421 tctctccaagctccaagaga 31440
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>dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, section 74/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ggaaagttggcaaactttga 222
              ||||||||||||||||||||
Sbjct: 292455 ggaaagttggcaaactttga 292474
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>gb|AC101890.9| Mus musculus chromosome 1, clone RP23-467L1, complete sequence
          Length = 174897

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   atctggatatatgccctgga 205
             ||||||||||||||||||||
Sbjct: 25218 atctggatatatgccctgga 25199
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>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 343     gataaaagaaggggatatgatcgt 366
               |||||||||||||||| |||||||
Sbjct: 1277200 gataaaagaaggggatgtgatcgt 1277223
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>gb|AF008243.1|AF008243 Homo sapiens cosmid clone C102H1064 from 21q22.2, complete sequence
          Length = 34037

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  ggaaagttggcaaactttga 222
            ||||||||||||||||||||
Sbjct: 5784 ggaaagttggcaaactttga 5765
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>gb|AC026191.4| Homo sapiens chromosome 3 clone RP11-380O24 map 3p, complete sequence
          Length = 164528

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   taaaagaaggggatatgatc 364
             ||||||||||||||||||||
Sbjct: 31370 taaaagaaggggatatgatc 31389
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>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete
              sequence
          Length = 210427

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    tctggatatatgccctggaaagtt 210
              ||||||||||||||| ||||||||
Sbjct: 161944 tctggatatatgcccaggaaagtt 161921
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>gb|AC018506.5| Homo sapiens chromosome 3 clone RP11-58B17 map 3p, complete sequence
          Length = 191575

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    taaaagaaggggatatgatc 364
              ||||||||||||||||||||
Sbjct: 158167 taaaagaaggggatatgatc 158186
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>dbj|AP000160.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 12/16, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ggaaagttggcaaactttga 222
             ||||||||||||||||||||
Sbjct: 39872 ggaaagttggcaaactttga 39891
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>dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 9/13
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ggaaagttggcaaactttga 222
             ||||||||||||||||||||
Sbjct: 74268 ggaaagttggcaaactttga 74287
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>dbj|AP001417.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB7T-ERG region,
             clone:D40
          Length = 89723

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ggaaagttggcaaactttga 222
             ||||||||||||||||||||
Sbjct: 23020 ggaaagttggcaaactttga 23039


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,074,445
Number of Sequences: 3902068
Number of extensions: 5074445
Number of successful extensions: 142659
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142369
Number of HSP's gapped (non-prelim): 288
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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