| Clone Name | bags6i18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106714.1| Zea mays PCO119626 mRNA sequence Length = 1251 Score = 91.7 bits (46), Expect = 3e-16 Identities = 75/86 (87%) Strand = Plus / Minus Query: 4 aagcttgngantgccactaangatgctagcaatatgaagatcangaatcccaagcatctt 63 ||||||| || |||||| || ||||| |||||||||||| | | ||||||||| |||| Sbjct: 1092 aagcttgagaatgccaccaaagatgccagcaatatgaagtttaggaatcccaaatatctg 1033 Query: 64 tctatgcttaatcacttgcgattcta 89 |||||||||||||||||||||||||| Sbjct: 1032 tctatgcttaatcacttgcgattcta 1007
>ref|XM_465817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2022 Score = 60.0 bits (30), Expect = 1e-06 Identities = 71/86 (82%) Strand = Plus / Plus Query: 4 aagcttgngantgccactaangatgctagcaatatgaagatcangaatcccaagcatctt 63 ||||||| || ||| || || |||||||| ||||||||| | | ||| |||||| |||| Sbjct: 1008 aagcttgagaatgctacaaaagatgctagtaatatgaagtttaggaaccccaagtatctc 1067 Query: 64 tctatgcttaatcacttgcgattcta 89 || ||||| ||||||||||| ||||| Sbjct: 1068 tcgatgctcaatcacttgcggttcta 1093
>ref|XM_506807.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0021C10.5 mRNA Length = 2047 Score = 60.0 bits (30), Expect = 1e-06 Identities = 71/86 (82%) Strand = Plus / Plus Query: 4 aagcttgngantgccactaangatgctagcaatatgaagatcangaatcccaagcatctt 63 ||||||| || ||| || || |||||||| ||||||||| | | ||| |||||| |||| Sbjct: 1031 aagcttgagaatgctacaaaagatgctagtaatatgaagtttaggaaccccaagtatctc 1090 Query: 64 tctatgcttaatcacttgcgattcta 89 || ||||| ||||||||||| ||||| Sbjct: 1091 tcgatgctcaatcacttgcggttcta 1116
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 1e-06 Identities = 71/86 (82%) Strand = Plus / Minus Query: 4 aagcttgngantgccactaangatgctagcaatatgaagatcangaatcccaagcatctt 63 ||||||| || ||| || || |||||||| ||||||||| | | ||| |||||| |||| Sbjct: 17660411 aagcttgagaatgctacaaaagatgctagtaatatgaagtttaggaaccccaagtatctc 17660352 Query: 64 tctatgcttaatcacttgcgattcta 89 || ||||| ||||||||||| ||||| Sbjct: 17660351 tcgatgctcaatcacttgcggttcta 17660326
>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0021C10 Length = 119527 Score = 60.0 bits (30), Expect = 1e-06 Identities = 71/86 (82%) Strand = Plus / Minus Query: 4 aagcttgngantgccactaangatgctagcaatatgaagatcangaatcccaagcatctt 63 ||||||| || ||| || || |||||||| ||||||||| | | ||| |||||| |||| Sbjct: 16425 aagcttgagaatgctacaaaagatgctagtaatatgaagtttaggaaccccaagtatctc 16366 Query: 64 tctatgcttaatcacttgcgattcta 89 || ||||| ||||||||||| ||||| Sbjct: 16365 tcgatgctcaatcacttgcggttcta 16340
>dbj|AK102664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101K22, full insert sequence Length = 2023 Score = 60.0 bits (30), Expect = 1e-06 Identities = 71/86 (82%) Strand = Plus / Plus Query: 4 aagcttgngantgccactaangatgctagcaatatgaagatcangaatcccaagcatctt 63 ||||||| || ||| || || |||||||| ||||||||| | | ||| |||||| |||| Sbjct: 1009 aagcttgagaatgctacaaaagatgctagtaatatgaagtttaggaaccccaagtatctc 1068 Query: 64 tctatgcttaatcacttgcgattcta 89 || ||||| ||||||||||| ||||| Sbjct: 1069 tcgatgctcaatcacttgcggttcta 1094
>dbj|AK069572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023H24, full insert sequence Length = 2047 Score = 60.0 bits (30), Expect = 1e-06 Identities = 71/86 (82%) Strand = Plus / Plus Query: 4 aagcttgngantgccactaangatgctagcaatatgaagatcangaatcccaagcatctt 63 ||||||| || ||| || || |||||||| ||||||||| | | ||| |||||| |||| Sbjct: 1031 aagcttgagaatgctacaaaagatgctagtaatatgaagtttaggaaccccaagtatctc 1090 Query: 64 tctatgcttaatcacttgcgattcta 89 || ||||| ||||||||||| ||||| Sbjct: 1091 tcgatgctcaatcacttgcggttcta 1116
>gb|AY653224.1| Malus x domestica glycosyl transferase-like protein (GT) mRNA, partial cds Length = 750 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 atctttctatgcttaatca 77 ||||||||||||||||||| Sbjct: 524 atctttctatgcttaatca 542
>emb|AL354932.26| Human DNA sequence from clone RP11-117L21 on chromosome 9 Contains the 5' end of the MELK gene for maternal embryonic leucine zipper kinase (KIAA0175) and two CpG islands, complete sequence Length = 155989 Score = 38.2 bits (19), Expect = 3.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 tcccaagcatctttctatgctta 73 |||||||||||||| |||||||| Sbjct: 131756 tcccaagcatctttttatgctta 131778 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 364,214 Number of Sequences: 3902068 Number of extensions: 364214 Number of successful extensions: 22135 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 22117 Number of HSP's gapped (non-prelim): 18 length of query: 91 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 70 effective length of database: 17,151,101,840 effective search space: 1200577128800 effective search space used: 1200577128800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)