ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6i16 |
|---|---|
| Clone Library Name | barley_pub |
>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 69.7 bits (169), Expect = 2e-12 Identities = 31/53 (58%), Positives = 38/53 (71%) Frame = +2 Query: 2 FFNXLEITKLVSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 FF+ L+IT S ILYFGY +I FF+ TGTIGF+ACFW KIY+ VK+D Sbjct: 611 FFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 69.7 bits (169), Expect = 2e-12 Identities = 31/53 (58%), Positives = 38/53 (71%) Frame = +2 Query: 2 FFNXLEITKLVSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 FF+ L+IT S ILYFGY +I FF+ TGTIGF+ACFW KIY+ VK+D Sbjct: 611 FFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor| (p76) Length = 663 Score = 69.7 bits (169), Expect = 2e-12 Identities = 31/53 (58%), Positives = 38/53 (71%) Frame = +2 Query: 2 FFNXLEITKLVSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 FF+ L+IT S ILYFGY +I FF+ TGTIGF+ACFW KIY+ VK+D Sbjct: 611 FFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor| Length = 662 Score = 69.7 bits (169), Expect = 2e-12 Identities = 31/53 (58%), Positives = 38/53 (71%) Frame = +2 Query: 2 FFNXLEITKLVSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 FF+ L+IT S ILYFGY +I FF+ TGTIGF+ACFW KIY+ VK+D Sbjct: 610 FFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662
>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4| Length = 625 Score = 63.5 bits (153), Expect = 1e-10 Identities = 28/53 (52%), Positives = 38/53 (71%) Frame = +2 Query: 2 FFNXLEITKLVSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 F N L+I + + +LYFGY + +F++LTGTIGFYA + RKIYA+VKID Sbjct: 573 FVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 625
>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +2 Query: 32 VSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 V + +FGY L+ Y FF++ GTI F++ R IY ++K+D Sbjct: 564 VQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +2 Query: 32 VSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 V + +FGY L+ Y FF++ GTI F++ R IY ++K+D Sbjct: 564 VQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor| (hMP70) Length = 606 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +2 Query: 32 VSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 V + +FGY L+ Y FF++ GTI F++ R IY ++K+D Sbjct: 564 VQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor| Length = 589 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +2 Query: 32 VSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 V + +FGY L+ Y FF++ GTI F++ R IY ++K+D Sbjct: 547 VQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 589
>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane| protein) (Pheromone alpha-factor transporter) (Acidic 24 kDa late endocytic intermediate component) Length = 667 Score = 38.9 bits (89), Expect = 0.004 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Frame = +2 Query: 2 FFNXLEITKLVSG-----ILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 F + + TK G +LY GY + ++TG+IGF + RKIY+S+K+D Sbjct: 610 FIHSILFTKFKLGGFTTIVLYVGYSSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667
>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor| Length = 587 Score = 38.1 bits (87), Expect = 0.006 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2 Query: 2 FFNXLEITKLVSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 +F ++ L YFGYM + A ++ G IG+ RKIY +VKID Sbjct: 535 YFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587
>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor| (SM-11044-binding protein) (EP70-P-iso) Length = 589 Score = 38.1 bits (87), Expect = 0.006 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2 Query: 2 FFNXLEITKLVSGILYFGYMLIXXYAFFVLTGTIGFYACFWXXRKIYASVKID 160 +F ++ L YFGYM + A ++ G IG+ RKIY +VKID Sbjct: 537 YFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,132,995 Number of Sequences: 219361 Number of extensions: 149552 Number of successful extensions: 450 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 450 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
