ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103782.1| Zea mays PCO080860 mRNA sequence Length = 2117 Score = 428 bits (216), Expect = e-117 Identities = 408/474 (86%) Strand = Plus / Plus Query: 11 gaagccangtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgag 70 ||||||| ||| || || || || |||||||||||| ||||||| ||||| ||||||||| Sbjct: 526 gaagccaagtcagatattgttgtgaagattggtctccggaaaggatccaaatcttttgag 585 Query: 71 gaagcacgtggtgctggattcactgaggaggacggaacattgggggacatatgggagaca 130 |||||||||| ||||||||||| || ||| |||||| ||||| || || ||||| || Sbjct: 586 gaagcacgtgccgctggattcaccgaagagagcggaaccttgggcgatatttgggaaacc 645 Query: 131 gtttcaggcagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactat 190 || || |||||||| |||||| ||||| |||| || ||| |||||||||| ||||||||| Sbjct: 646 gtctccggcagcgatcttgtgttgctgctgatatcggatgctgcacaggctgacaactat 705 Query: 191 gagaagatcttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctc 250 |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 706 gagaagatcttctctcacatgaaaccaaacagtatccttggtttatctcatggatttctt 765 Query: 251 cttggtcatttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgta 310 || || ||||||||||||| || || |||||||||||||||||||| ||| |||||||| Sbjct: 766 ctaggacatttgcaatcactcggactcgatttcccaaagaacatcagtgtgattgctgta 825 Query: 311 tgtcccaagggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaac 370 || |||||||||||||| || || || || ||||| |||||||||||||||||||| || Sbjct: 826 tgccccaagggaatgggtccatccgtccgcagactttatgttcagggcaaggaagtcaat 885 Query: 371 ggtgctggcatcaacgctagctttgctgttcaccangatgttgatggaagggcaactgat 430 || |||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 886 ggcgctggcatcaactctagctttgctgtgcaccaggatgttgatggaagggcaactgat 945 Query: 431 gttgctcttggatggncngntgcactangatccccgttcacctttgctactact 484 |||||| | | |||| | | |||||| | ||||| ||||| |||||||||||| Sbjct: 946 gttgctttagcatggtcagttgcacttggttcccccttcacgtttgctactact 999
>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence Length = 1992 Score = 418 bits (211), Expect = e-114 Identities = 389/450 (86%) Strand = Plus / Plus Query: 35 aagattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcact 94 |||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||||| Sbjct: 458 aagattggtctccggaaaggatccaaatcttttgaggaagcacgtgccgctggattcacc 517 Query: 95 gaggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctg 154 || ||| |||||| ||||| || || ||||| || || || |||||||| |||||| || Sbjct: 518 gaagagagcggaaccttgggcgatatttgggaaaccgtctccggcagcgatcttgtgttg 577 Query: 155 ctgttgatctcagattctgcacaggcagacaactatgagaagatcttctctcacatgaaa 214 ||| |||| || ||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 578 ctgctgatatccgatgctgcacaggctgacaactatgagaagatcttctctcacatgaaa 637 Query: 215 ccaaacagcattcttggtttatctcatgggtttctccttggtcatttgcaatcacatggc 274 |||||||| || ||||||||||||||||| ||||| || || ||||||||||||| || Sbjct: 638 ccaaacagtatccttggtttatctcatggatttcttctgggacatttgcaatcactcgga 697 Query: 275 cttgatttcccaaagaacatcagcgtggttgctgtatgtcccaagggaatgggcccgtcg 334 || |||||||||||||||||||| ||| |||||||||| |||||||||||||| || || Sbjct: 698 ctcgatttcccaaagaacatcagtgtgattgctgtatgccccaagggaatgggtccatcc 757 Query: 335 gttcggagactgtatgttcagggcaaggaagtaaacggtgctggcatcaacgctagcttt 394 || || || || |||||||||||||||||||| || || |||||||||||| |||||||| Sbjct: 758 gtccgcaggctttatgttcagggcaaggaagtcaatggcgctggcatcaactctagcttt 817 Query: 395 gctgttcaccangatgttgatggaagggcaactgatgttgctcttggatggncngntgca 454 ||||| ||||| |||||||||||||||||||||||||||||| | | |||| | | |||| Sbjct: 818 gctgtgcaccaggatgttgatggaagggcaactgatgttgctttagcatggtcagttgca 877 Query: 455 ctangatccccgttcacctttgctactact 484 || | ||||| ||||| |||||||||||| Sbjct: 878 cttggttcccccttcacgtttgctactact 907
>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full insert sequence Length = 1983 Score = 387 bits (195), Expect = e-104 Identities = 402/473 (84%) Strand = Plus / Plus Query: 11 gaagccangtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgag 70 ||||| | ||||||||| || || |||||||||||| ||||||| || ||||| ||||| Sbjct: 459 gaagcgaagtctgacattgttgttaagattggtctccggaaaggctctaagtcatttgat 518 Query: 71 gaagcacgtggtgctggattcactgaggaggacggaacattgggggacatatgggagaca 130 |||||||||| |||||| || ||||| ||| ||||| ||||| || || |||||||| Sbjct: 519 gaagcacgtgctgctggctttactgaagagagtggaaccttgggtgatatttgggagact 578 Query: 131 gtttcaggcagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactat 190 |||| ||||||||||| ||| |||||||||| | ||| |||||||||||||||||||| Sbjct: 579 gtttttggcagcgacctcgtgttgctgttgatattagacgctgcacaggcagacaactat 638 Query: 191 gagaagatcttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctc 250 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 639 gagaaaatcttctctcacatgaaaccaaacagcattcttggtttatcacatggatttttg 698 Query: 251 cttggtcatttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgta 310 ||||| ||||||||||| ||||||||||||||| || || ||||||||| |||||||| Sbjct: 699 cttggacatttgcaatctgctggccttgatttccctaaaaatatcagcgtgattgctgta 758 Query: 311 tgtcccaagggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaac 370 || |||||||||||||| || || |||||||| | || || || ||||| ||| | || Sbjct: 759 tgccccaagggaatgggtccatccgttcggaggttatacgtacaaggcaaagaaattaat 818 Query: 371 ggtgctggcatcaacgctagctttgctgttcaccangatgttgatggaagggcaactgat 430 |||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 819 ggtgctggtatcaactctagttttgctgttcaccaggatgttgatggaagggcaactgat 878 Query: 431 gttgctcttggatggncngntgcactangatccccgttcacctttgctactac 483 |||||||| |||||| | | ||| || |||| || ||||| ||||||||||| Sbjct: 879 gttgctctaggatggtcagttgcgctgggatctcccttcacatttgctactac 931
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 321 bits (162), Expect = 1e-84 Identities = 388/465 (83%) Strand = Plus / Plus Query: 23 gacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacgtggt 82 |||||||| || |||||||||||| |||||||||| || |||||||| |||||||| | Sbjct: 415 gacatcgttgttaagattggtctccggaaaggttctaaatcttttgaagaagcacgcgca 474 Query: 83 gctggattcactgaggaggacggaacattgggggacatatgggagacagtttcaggcagc 142 |||||||| ||||| ||| || ||| | || || ||||||||||| | ||| | ||| Sbjct: 475 gctggatttactgaagagagtgggacacttggagatatatgggagactatctcaagtagc 534 Query: 143 gaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagatcttc 202 || ||| || || ||||||| |||||| |||| ||||| || ||||||||| | || ||| Sbjct: 535 gatcttttgttgttgttgatatcagatgctgctcaggcggataactatgaggaaattttc 594 Query: 203 tctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtcatttg 262 || ||||||||||| ||||| |||||||| || || ||||| ||||||||||| |||||| Sbjct: 595 tcacacatgaaacccaacagtattcttggattgtcacatggatttctccttggacatttg 654 Query: 263 caatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaaggga 322 ||||| ||||||||||||||| || |||||||| || |||||||| |||||||||||| Sbjct: 655 caatctgttggccttgatttccctaaaaacatcagtgttgttgctgtgtgtcccaaggga 714 Query: 323 atgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctggcatc 382 |||||||| || ||| | || || ||||||||||| || ||||||||||||||||| ||| Sbjct: 715 atgggcccatcagttagaaggctttatgttcagggaaaagaagtaaacggtgctggtatc 774 Query: 383 aacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctcttgga 442 ||| | ||||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 775 aactccagctttgctgtacaccaggatgttgatggaagagcaacagatgtcgctcttgga 834 Query: 443 tggncngntgcactangatccccgttcacctttgctactactcta 487 ||| | | ||| ||| | || || ||||| ||||||||||||||| Sbjct: 835 tggtcagttgctctaggttctcctttcacatttgctactactcta 879
>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full insert sequence Length = 1917 Score = 321 bits (162), Expect = 1e-84 Identities = 388/465 (83%) Strand = Plus / Plus Query: 23 gacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacgtggt 82 |||||||| || |||||||||||| |||||||||| || |||||||| |||||||| | Sbjct: 366 gacatcgttgttaagattggtctccggaaaggttctaaatcttttgaagaagcacgcgca 425 Query: 83 gctggattcactgaggaggacggaacattgggggacatatgggagacagtttcaggcagc 142 |||||||| ||||| ||| || ||| | || || ||||||||||| | ||| | ||| Sbjct: 426 gctggatttactgaagagagtgggacacttggagatatatgggagactatctcaagtagc 485 Query: 143 gaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagatcttc 202 || ||| || || ||||||| |||||| |||| ||||| || ||||||||| | || ||| Sbjct: 486 gatcttttgttgttgttgatatcagatgctgctcaggcggataactatgaggaaattttc 545 Query: 203 tctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtcatttg 262 || ||||||||||| ||||| |||||||| || || ||||| ||||||||||| |||||| Sbjct: 546 tcacacatgaaacccaacagtattcttggattgtcacatggatttctccttggacatttg 605 Query: 263 caatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaaggga 322 ||||| ||||||||||||||| || |||||||| || |||||||| |||||||||||| Sbjct: 606 caatctgttggccttgatttccctaaaaacatcagtgttgttgctgtgtgtcccaaggga 665 Query: 323 atgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctggcatc 382 |||||||| || ||| | || || ||||||||||| || ||||||||||||||||| ||| Sbjct: 666 atgggcccatcagttagaaggctttatgttcagggaaaagaagtaaacggtgctggtatc 725 Query: 383 aacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctcttgga 442 ||| | ||||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 726 aactccagctttgctgtacaccaggatgttgatggaagagcaacagatgtcgctcttgga 785 Query: 443 tggncngntgcactangatccccgttcacctttgctactactcta 487 ||| | | ||| ||| | || || ||||| ||||||||||||||| Sbjct: 786 tggtcagttgctctaggttctcctttcacatttgctactactcta 830
>emb|AJ234546.1|HVU234546 Hordeum vulgare genomic DNA fragment; clone MWG0632 Length = 703 Score = 285 bits (144), Expect = 7e-74 Identities = 144/144 (100%) Strand = Plus / Minus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 213 Query: 96 aggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctgc 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 aggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctgc 153 Query: 156 tgttgatctcagattctgcacagg 179 |||||||||||||||||||||||| Sbjct: 152 tgttgatctcagattctgcacagg 129 Score = 67.9 bits (34), Expect = 3e-08 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 ttccttggtggaagccangtctgacatcgtcgtcaag 37 ||||||||||||||||| ||||||||||||||||||| Sbjct: 628 ttccttggtggaagccaagtctgacatcgtcgtcaag 592
>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA sequence Length = 1957 Score = 250 bits (126), Expect = 4e-63 Identities = 370/453 (81%) Strand = Plus / Plus Query: 35 aagattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcact 94 |||||||||||| |||||||||| || |||||||| ||||| || | || |||||||| Sbjct: 453 aagattggtctccggaaaggttctaaatcttttgaagaagcccgagcagcaggattcacc 512 Query: 95 gaggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctg 154 || ||| || || |||| || ||||||||||| || ||| ||| || ||||| || Sbjct: 513 gaagagagtgggacgctgggtgatatatgggagactgtatcaaacagtgatcttgttttg 572 Query: 155 ctgttgatctcagattctgcacaggcagacaactatgagaagatcttctctcacatgaaa 214 || |||| || |||||||| ||||| || ||||| ||||| || ||||| ||||||||| Sbjct: 573 ctactgatatctgattctgctcaggctgataactacgagaaaattttctcgcacatgaaa 632 Query: 215 ccaaacagcattcttggtttatctcatgggtttctccttggtcatttgcaatcacatggc 274 |||||||| ||||||||||| || ||||| ||||||||||| ||||||||||| | || Sbjct: 633 ccaaacagtattcttggtttgtcacatggatttctccttggacatttgcaatctctgggt 692 Query: 275 cttgatttcccaaagaacatcagcgtggttgctgtatgtcccaagggaatgggcccgtcg 334 |||||||||| || | |||||| ||| |||||||||| ||||||||||||||||| || Sbjct: 693 tttgatttccctaaaagcatcagtgtgattgctgtatgccccaagggaatgggcccatca 752 Query: 335 gttcggagactgtatgttcagggcaaggaagtaaacggtgctggcatcaacgctagcttt 394 || | ||||| |||||||||||||| || | || |||||||| ||||| ||||||||| Sbjct: 753 gtcagaagactttatgttcagggcaaagagatcaatggtgctggtatcaatgctagcttt 812 Query: 395 gctgttcaccangatgttgatggaagggcaactgatgttgctcttggatggncngntgca 454 ||||||||||| |||||||||||||||||||| ||||| ||||| || ||| | | || Sbjct: 813 gctgttcaccaggatgttgatggaagggcaacagatgtagctctagggtggtcagtagct 872 Query: 455 ctangatccccgttcacctttgctactactcta 487 || | || || ||||| ||||||||||||||| Sbjct: 873 ttaggttctcctttcacatttgctactactcta 905
>gb|AY103707.1| Zea mays PCO072121 mRNA sequence Length = 1985 Score = 250 bits (126), Expect = 4e-63 Identities = 370/453 (81%) Strand = Plus / Plus Query: 35 aagattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcact 94 |||||||||||| |||||||||| || |||||||| ||||| || | || |||||||| Sbjct: 464 aagattggtctccggaaaggttctaaatcttttgaagaagcccgagcagcaggattcacc 523 Query: 95 gaggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctg 154 || ||| || || |||| || ||||||||||| || ||| ||| || ||||| || Sbjct: 524 gaagagagtgggacgctgggtgatatatgggagactgtatcaaacagtgatcttgttttg 583 Query: 155 ctgttgatctcagattctgcacaggcagacaactatgagaagatcttctctcacatgaaa 214 || |||| || |||||||| ||||| || ||||| ||||| || ||||| ||||||||| Sbjct: 584 ctactgatatctgattctgctcaggctgataactacgagaaaattttctcgcacatgaaa 643 Query: 215 ccaaacagcattcttggtttatctcatgggtttctccttggtcatttgcaatcacatggc 274 |||||||| ||||||||||| || ||||| ||||||||||| ||||||||||| | || Sbjct: 644 ccaaacagtattcttggtttgtcacatggatttctccttggacatttgcaatctctgggt 703 Query: 275 cttgatttcccaaagaacatcagcgtggttgctgtatgtcccaagggaatgggcccgtcg 334 |||||||||| || | |||||| ||| |||||||||| ||||||||||||||||| || Sbjct: 704 tttgatttccctaaaagcatcagtgtgattgctgtatgccccaagggaatgggcccatca 763 Query: 335 gttcggagactgtatgttcagggcaaggaagtaaacggtgctggcatcaacgctagcttt 394 || | ||||| |||||||||||||| || | || |||||||| ||||| ||||||||| Sbjct: 764 gtcagaagactttatgttcagggcaaagagatcaatggtgctggtatcaatgctagcttt 823 Query: 395 gctgttcaccangatgttgatggaagggcaactgatgttgctcttggatggncngntgca 454 ||||||||||| |||||||||||||||||||| ||||| ||||| || ||| | | || Sbjct: 824 gctgttcaccaggatgttgatggaagggcaacagatgtagctctagggtggtcagtagct 883 Query: 455 ctangatccccgttcacctttgctactactcta 487 || | || || ||||| ||||||||||||||| Sbjct: 884 ttaggttctcctttcacatttgctactactcta 916
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 218 bits (110), Expect = 1e-53 Identities = 200/230 (86%) Strand = Plus / Minus Query: 176 caggcagacaactatgagaagatcttctctcacatgaaaccaaacagcattcttggttta 235 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 144963 caggcagacaactatgagaaaatcttctctcacatgaaaccaaacagtattcttggttta 144904 Query: 236 tctcatgggtttctccttggtcatttgcaatcacatggccttgatttcccaaagaacatc 295 || ||||| ||| | ||||| ||||||||||| |||||||||||||||||| || ||| Sbjct: 144903 tcacatggatttttgcttggacatttgcaatctgctggccttgatttcccaaaaaatatc 144844 Query: 296 agcgtggttgctgtatgtcccaagggaatgggcccgtcggttcggagactgtatgttcag 355 |||||| |||||||||| |||||||||||||| || || |||||||| | || || || Sbjct: 144843 agcgtgattgctgtatgccccaagggaatgggtccatccgttcggaggttatacgtacaa 144784 Query: 356 ggcaaggaagtaaacggtgctggcatcaacgctagctttgctgttcacca 405 ||||| ||| | || |||||||| |||||| |||| |||||||||||||| Sbjct: 144783 ggcaaagaaattaatggtgctggtatcaactctagttttgctgttcacca 144734 Score = 103 bits (52), Expect = 5e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 ||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| || |||| Sbjct: 145343 agattggtctccggaaaggctctaagtcatttgatgaagcacgtgctgctggctttactg 145284 Query: 96 aggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctgc 155 | ||| ||||| ||||| || || |||||||| ||||| ||||||||||| ||| ||| Sbjct: 145283 aagagagtggaaccttgggtgatatttgggagactgtttctggcagcgacctcgtgttgc 145224 Query: 156 tgttgatctcagattctgcacagg 179 ||||||| ||||| ||||||||| Sbjct: 145223 tgttgatatcagacgctgcacagg 145200 Score = 81.8 bits (41), Expect = 2e-12 Identities = 67/77 (87%) Strand = Plus / Minus Query: 407 gatgttgatggaagggcaactgatgttgctcttggatggncngntgcactangatccccg 466 |||||||||||||||||||||||||||||||| |||||| | | ||| || |||| || Sbjct: 144647 gatgttgatggaagggcaactgatgttgctctaggatggtcagttgcgctgggatctccc 144588 Query: 467 ttcacctttgctactac 483 ||||| ||||||||||| Sbjct: 144587 ttcacatttgctactac 144571
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 218 bits (110), Expect = 1e-53 Identities = 200/230 (86%) Strand = Plus / Minus Query: 176 caggcagacaactatgagaagatcttctctcacatgaaaccaaacagcattcttggttta 235 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 28360721 caggcagacaactatgagaaaatcttctctcacatgaaaccaaacagtattcttggttta 28360662 Query: 236 tctcatgggtttctccttggtcatttgcaatcacatggccttgatttcccaaagaacatc 295 || ||||| ||| | ||||| ||||||||||| |||||||||||||||||| || ||| Sbjct: 28360661 tcacatggatttttgcttggacatttgcaatctgctggccttgatttcccaaaaaatatc 28360602 Query: 296 agcgtggttgctgtatgtcccaagggaatgggcccgtcggttcggagactgtatgttcag 355 |||||| |||||||||| |||||||||||||| || || |||||||| | || || || Sbjct: 28360601 agcgtgattgctgtatgccccaagggaatgggtccatccgttcggaggttatacgtacaa 28360542 Query: 356 ggcaaggaagtaaacggtgctggcatcaacgctagctttgctgttcacca 405 ||||| ||| | || |||||||| |||||| |||| |||||||||||||| Sbjct: 28360541 ggcaaagaaattaatggtgctggtatcaactctagttttgctgttcacca 28360492 Score = 103 bits (52), Expect = 5e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 ||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| || |||| Sbjct: 28361101 agattggtctccggaaaggctctaagtcatttgatgaagcacgtgctgctggctttactg 28361042 Query: 96 aggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctgc 155 | ||| ||||| ||||| || || |||||||| ||||| ||||||||||| ||| ||| Sbjct: 28361041 aagagagtggaaccttgggtgatatttgggagactgtttctggcagcgacctcgtgttgc 28360982 Query: 156 tgttgatctcagattctgcacagg 179 ||||||| ||||| ||||||||| Sbjct: 28360981 tgttgatatcagacgctgcacagg 28360958 Score = 81.8 bits (41), Expect = 2e-12 Identities = 67/77 (87%) Strand = Plus / Minus Query: 407 gatgttgatggaagggcaactgatgttgctcttggatggncngntgcactangatccccg 466 |||||||||||||||||||||||||||||||| |||||| | | ||| || |||| || Sbjct: 28360405 gatgttgatggaagggcaactgatgttgctctaggatggtcagttgcgctgggatctccc 28360346 Query: 467 ttcacctttgctactac 483 ||||| ||||||||||| Sbjct: 28360345 ttcacatttgctactac 28360329
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 196 bits (99), Expect = 5e-47 Identities = 198/231 (85%) Strand = Plus / Plus Query: 175 acaggcagacaactatgagaagatcttctctcacatgaaaccaaacagcattcttggttt 234 |||||| || ||||||||| | || ||||| ||||||||||| ||||| |||||||| || Sbjct: 26387461 acaggcggataactatgaggaaattttctcacacatgaaacccaacagtattcttggatt 26387520 Query: 235 atctcatgggtttctccttggtcatttgcaatcacatggccttgatttcccaaagaacat 294 || ||||| ||||||||||| ||||||||||| ||||||||||||||| || ||||| Sbjct: 26387521 gtcacatggatttctccttggacatttgcaatctgttggccttgatttccctaaaaacat 26387580 Query: 295 cagcgtggttgctgtatgtcccaagggaatgggcccgtcggttcggagactgtatgttca 354 ||| || |||||||| |||||||||||||||||||| || ||| | || || |||||||| Sbjct: 26387581 cagtgttgttgctgtgtgtcccaagggaatgggcccatcagttagaaggctttatgttca 26387640 Query: 355 gggcaaggaagtaaacggtgctggcatcaacgctagctttgctgttcacca 405 ||| || ||||||||||||||||| |||||| | ||||||||||| ||||| Sbjct: 26387641 gggaaaagaagtaaacggtgctggtatcaactccagctttgctgtacacca 26387691 Score = 73.8 bits (37), Expect = 5e-10 Identities = 69/81 (85%) Strand = Plus / Plus Query: 407 gatgttgatggaagggcaactgatgttgctcttggatggncngntgcactangatccccg 466 |||||||||||||| ||||| ||||| |||||||||||| | | ||| ||| | || || Sbjct: 26387808 gatgttgatggaagagcaacagatgtcgctcttggatggtcagttgctctaggttctcct 26387867 Query: 467 ttcacctttgctactactcta 487 ||||| ||||||||||||||| Sbjct: 26387868 ttcacatttgctactactcta 26387888 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 ||||||||||| |||||||||| || |||||||| |||||||| | |||||||| |||| Sbjct: 26386870 agattggtctccggaaaggttctaaatcttttgaagaagcacgcgcagctggatttactg 26386929 Query: 96 a 96 | Sbjct: 26386930 a 26386930
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 196 bits (99), Expect = 5e-47 Identities = 198/231 (85%) Strand = Plus / Plus Query: 175 acaggcagacaactatgagaagatcttctctcacatgaaaccaaacagcattcttggttt 234 |||||| || ||||||||| | || ||||| ||||||||||| ||||| |||||||| || Sbjct: 61326 acaggcggataactatgaggaaattttctcacacatgaaacccaacagtattcttggatt 61385 Query: 235 atctcatgggtttctccttggtcatttgcaatcacatggccttgatttcccaaagaacat 294 || ||||| ||||||||||| ||||||||||| ||||||||||||||| || ||||| Sbjct: 61386 gtcacatggatttctccttggacatttgcaatctgttggccttgatttccctaaaaacat 61445 Query: 295 cagcgtggttgctgtatgtcccaagggaatgggcccgtcggttcggagactgtatgttca 354 ||| || |||||||| |||||||||||||||||||| || ||| | || || |||||||| Sbjct: 61446 cagtgttgttgctgtgtgtcccaagggaatgggcccatcagttagaaggctttatgttca 61505 Query: 355 gggcaaggaagtaaacggtgctggcatcaacgctagctttgctgttcacca 405 ||| || ||||||||||||||||| |||||| | ||||||||||| ||||| Sbjct: 61506 gggaaaagaagtaaacggtgctggtatcaactccagctttgctgtacacca 61556 Score = 73.8 bits (37), Expect = 5e-10 Identities = 69/81 (85%) Strand = Plus / Plus Query: 407 gatgttgatggaagggcaactgatgttgctcttggatggncngntgcactangatccccg 466 |||||||||||||| ||||| ||||| |||||||||||| | | ||| ||| | || || Sbjct: 61673 gatgttgatggaagagcaacagatgtcgctcttggatggtcagttgctctaggttctcct 61732 Query: 467 ttcacctttgctactactcta 487 ||||| ||||||||||||||| Sbjct: 61733 ttcacatttgctactactcta 61753 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 ||||||||||| |||||||||| || |||||||| |||||||| | |||||||| |||| Sbjct: 60735 agattggtctccggaaaggttctaaatcttttgaagaagcacgcgcagctggatttactg 60794 Query: 96 a 96 | Sbjct: 60795 a 60795
>emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase Length = 2050 Score = 182 bits (92), Expect = 7e-43 Identities = 363/455 (79%) Strand = Plus / Plus Query: 32 gtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattc 91 |||||||||||||| | ||||| || || ||||||| || ||||||| |||||| ||| Sbjct: 497 gtcaagattggtcttcgcaaaggatctaactcttttgccgaggcacgtgctgctggtttc 556 Query: 92 actgaggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtg 151 | ||| ||| | || || || || || || |||||||| |||| || || |||||||| Sbjct: 557 agtgaagagaatggcactttaggtgatatgtgggagaccatttctggaagtgaccttgtt 616 Query: 152 ctgctgttgatctcagattctgcacaggcagacaactatgagaagatcttctctcacatg 211 |||||| |||| || |||||||| ||||| ||||| || || ||| | ||||| |||||| Sbjct: 617 ctgctgctgatttctgattctgctcaggctgacaattacgaaaaggtattctcccacatg 676 Query: 212 aaaccaaacagcattcttggtttatctcatgggtttctccttggtcatttgcaatcacat 271 |||||||||||||||||||| || || ||||| ||||| | || || ||||||| Sbjct: 677 aaaccaaacagcattcttgggttgtcacatggatttcttttggggcacctgcaatctttg 736 Query: 272 ggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaagggaatgggcccg 331 || | || ||||| |||||||| |||||| |||||||||| |||||||||||||| || Sbjct: 737 gggcaggacttccccaagaacattagcgtgattgctgtatgccccaagggaatggggcct 796 Query: 332 tcggttcggagactgtatgttcagggcaaggaagtaaacggtgctggcatcaacgctagc 391 || ||| | || |||||||||| || || ||||| || || ||||| |||||| ||||| Sbjct: 797 tctgttagaaggttgtatgttcaaggtaaagaagtcaatggcgctggaatcaactctagc 856 Query: 392 tttgctgttcaccangatgttgatggaagggcaactgatgttgctcttggatggncngnt 451 |||||||||||||| ||||||||||| ||||| || ||||| || ||||| ||| | | Sbjct: 857 tttgctgttcaccaggatgttgatggtagggctacagatgtagcacttggctggtcaatt 916 Query: 452 gcactangatccccgttcacctttgctactactct 486 || || |||| || ||||| |||||||||||||| Sbjct: 917 gctcttggatctcctttcacatttgctactactct 951
>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1983 Score = 176 bits (89), Expect = 4e-41 Identities = 372/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 498 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 557 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| ||| || || ||||| || |||||||| || | | || Sbjct: 558 tgctgctggcttcactgaagagagtggtactttgggtgatatatgggaaactatcgctgg 617 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 618 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 677 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 678 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 737 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 738 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 797 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 798 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 857 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 858 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 917 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 918 gggatggtcagtagcacttggttctccgtttacttttgctactactct 965
>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA, complete cds Length = 2087 Score = 168 bits (85), Expect = 1e-38 Identities = 371/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 547 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 606 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 607 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 666 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 667 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 726 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 727 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 786 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 787 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 846 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 847 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 906 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 907 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 966 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 967 gggatggtcagtagcacttggttctccgtttacttttgctactactct 1014
>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase (At3g58610/F14P22_200) mRNA, complete cds Length = 1776 Score = 168 bits (85), Expect = 1e-38 Identities = 371/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 438 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 497 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 498 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 557 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 558 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 617 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 618 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 677 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 678 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 737 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 738 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 797 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 798 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 857 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 858 gggatggtcagtagcacttggttctccgtttacttttgctactactct 905
>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2028 Score = 168 bits (85), Expect = 1e-38 Identities = 371/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 488 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 547 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 548 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 607 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 608 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 667 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 668 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 727 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 728 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 787 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 788 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 847 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 848 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 907 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 908 gggatggtcagtagcacttggttctccgtttacttttgctactactct 955
>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1807 Score = 168 bits (85), Expect = 1e-38 Identities = 371/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 438 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 497 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 498 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 557 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 558 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 617 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 618 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 677 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 678 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 737 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 738 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 797 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 798 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 857 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 858 gggatggtcagtagcacttggttctccgtttacttttgctactactct 905
>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2058 Score = 168 bits (85), Expect = 1e-38 Identities = 371/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 547 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 606 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 607 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 666 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 667 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 726 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 727 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 786 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 787 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 846 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 847 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 906 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 907 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 966 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 967 gggatggtcagtagcacttggttctccgtttacttttgctactactct 1014
>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit Length = 1966 Score = 168 bits (85), Expect = 1e-38 Identities = 318/396 (80%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 462 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 521 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 522 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 581 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 582 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 641 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 642 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 701 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 702 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 761 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 762 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 821 Query: 379 catcaacgctagctttgctgttcaccangatgttga 414 |||||||| || ||||| || ||||| |||||||| Sbjct: 822 aatcaacgccagttttgcagtccaccaggatgttga 857
>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1996 Score = 168 bits (85), Expect = 1e-38 Identities = 371/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 484 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 543 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 544 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 603 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 604 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 663 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 664 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 723 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 724 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 783 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 784 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 843 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 844 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 903 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 904 gggatggtcagtagcacttggttctccgtttacttttgctactactct 951
>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds Length = 1990 Score = 168 bits (85), Expect = 1e-38 Identities = 371/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 482 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 541 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 542 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 601 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 602 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 661 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 662 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 721 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 722 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 781 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 782 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 841 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 842 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 901 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 902 gggatggtcagtagcacttggttctccgtttacttttgctactactct 949
>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete cds Length = 1980 Score = 168 bits (85), Expect = 1e-38 Identities = 371/468 (79%) Strand = Plus / Plus Query: 19 gtctgacatcgtcgtcaagattggtctcaggaaaggttccaagtcttttgaggaagcacg 78 ||||||||| || ||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 484 gtctgacattgttgtcaagattggtctcagaaaagggtctcgctcatttgaggaggcacg 543 Query: 79 tggtgctggattcactgaggaggacggaacattgggggacatatgggagacagtttcagg 138 || |||||| |||||||| || || || ||||| || |||||||| || | | || Sbjct: 544 tgctgctggcttcactgaagaaagtggtactttgggtgatatatgggaaactatcgctgg 603 Query: 139 cagcgaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagat 198 ||| || ||||| |||| |||||||| ||| |||| || || || ||||||||||| || Sbjct: 604 cagtgatcttgtattgcttttgatctctgatgctgctcaagctgataactatgagaaaat 663 Query: 199 cttctctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtca 258 |||||||||||||| ||||||||||||||||||||||| || |||||||| || || || Sbjct: 664 attctctcacatgaagccaaacagcattcttggtttatcacacgggtttctactagggca 723 Query: 259 tttgcaatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaa 318 ||| || || || || |||||||||||||||||||| ||||| |||||||| || || Sbjct: 724 tttacagtcctcgggactcgatttcccaaagaacatcagtgtggtcgctgtatgccctaa 783 Query: 319 gggaatgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 ||||||||| || || || |||| || || || || || || ||| | ||||||||||| Sbjct: 784 gggaatgggtccttctgtgaggaggctttacgtccaaggaaaagaaattaacggtgctgg 843 Query: 379 catcaacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgctct 438 |||||||| || ||||| || ||||| |||||||| || || || | |||||||| | Sbjct: 844 aatcaacgccagttttgcagtccaccaggatgttgacggtagagccgccgatgttgcatt 903 Query: 439 tggatggncngntgcactangatccccgttcacctttgctactactct 486 |||||| | | ||||| | || ||||| || |||||||||||||| Sbjct: 904 gggatggtcagtagcacttggttctccgtttacttttgctactactct 951
>dbj|AB102895.1| Solanum melongena 1B08 mRNA for hypothetical protein, partial cds Length = 506 Score = 139 bits (70), Expect = 1e-29 Identities = 190/230 (82%) Strand = Plus / Plus Query: 149 gtgctgctgttgatctcagattctgcacaggcagacaactatgagaagatcttctctcac 208 |||||||| ||||| || ||| |||| ||||| || || |||||||| | ||||||||| Sbjct: 270 gtgctgcttttgatttctgatgctgctcaggctgataattatgagaaagtgttctctcac 329 Query: 209 atgaaaccaaacagcattcttggtttatctcatgggtttctccttggtcatttgcaatca 268 ||||| ||||||||||| ||||| | || ||||| || |||||||||||||| || ||| Sbjct: 330 atgaagccaaacagcatacttgggctttcacatggattcctccttggtcatttacagtca 389 Query: 269 catggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaagggaatgggc 328 |||||||| |||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 390 atgggccttgacttcccaaagaacattagtgtgattgctgtatgtcccaagggaatgggt 449 Query: 329 ccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctgg 378 || || || ||||| | |||||||| || || ||||| || |||||||| Sbjct: 450 ccctcagtcaggagattatatgttcaaggaaaagaagtcaatggtgctgg 499
>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase Length = 4395 Score = 131 bits (66), Expect = 2e-27 Identities = 189/230 (82%) Strand = Plus / Plus Query: 176 caggcagacaactatgagaagatcttctctcacatgaaaccaaacagcattcttggttta 235 ||||| || ||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 2269 caggctgataactatgagaaaatattctctcacatgaagccaaacagcattcttggttta 2328 Query: 236 tctcatgggtttctccttggtcatttgcaatcacatggccttgatttcccaaagaacatc 295 || || |||||||| || || ||||| || || || || |||||||||||||||||| Sbjct: 2329 tcacacgggtttctactagggcatttacagtcctcgggactcgatttcccaaagaacatc 2388 Query: 296 agcgtggttgctgtatgtcccaagggaatgggcccgtcggttcggagactgtatgttcag 355 || ||||| |||||||| || ||||||||||| || || || |||| || || || || Sbjct: 2389 agtgtggtcgctgtatgccctaagggaatgggtccttctgtgaggaggctttacgtccaa 2448 Query: 356 ggcaaggaagtaaacggtgctggcatcaacgctagctttgctgttcacca 405 || || ||| | ||||||||||| |||||||| || ||||| || ||||| Sbjct: 2449 ggaaaagaaattaacggtgctggaatcaacgccagttttgcagtccacca 2498 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 ||||||||||||| ||||| || || |||||||| ||||||| |||||| ||||||| Sbjct: 2035 agattggtctcagaaaagggtctcgctcatttgaggaggcacgtgctgctggcttcactg 2094 Query: 96 a 96 | Sbjct: 2095 a 2095
>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22 Length = 94239 Score = 131 bits (66), Expect = 2e-27 Identities = 189/230 (82%) Strand = Plus / Plus Query: 176 caggcagacaactatgagaagatcttctctcacatgaaaccaaacagcattcttggttta 235 ||||| || ||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 66248 caggctgataactatgagaaaatattctctcacatgaagccaaacagcattcttggttta 66307 Query: 236 tctcatgggtttctccttggtcatttgcaatcacatggccttgatttcccaaagaacatc 295 || || |||||||| || || ||||| || || || || |||||||||||||||||| Sbjct: 66308 tcacacgggtttctactagggcatttacagtcctcgggactcgatttcccaaagaacatc 66367 Query: 296 agcgtggttgctgtatgtcccaagggaatgggcccgtcggttcggagactgtatgttcag 355 || ||||| |||||||| || ||||||||||| || || || |||| || || || || Sbjct: 66368 agtgtggtcgctgtatgccctaagggaatgggtccttctgtgaggaggctttacgtccaa 66427 Query: 356 ggcaaggaagtaaacggtgctggcatcaacgctagctttgctgttcacca 405 || || ||| | ||||||||||| |||||||| || ||||| || ||||| Sbjct: 66428 ggaaaagaaattaacggtgctggaatcaacgccagttttgcagtccacca 66477 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 ||||||||||||| ||||| || || |||||||| ||||||| |||||| ||||||| Sbjct: 66014 agattggtctcagaaaagggtctcgctcatttgaggaggcacgtgctgctggcttcactg 66073 Query: 96 a 96 | Sbjct: 66074 a 66074
>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full insert sequence Length = 1153 Score = 123 bits (62), Expect = 6e-25 Identities = 99/113 (87%) Strand = Plus / Plus Query: 371 ggtgctggcatcaacgctagctttgctgttcaccangatgttgatggaagggcaactgat 430 |||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 7 ggtgctggtatcaactctagttttgctgttcaccaggatgttgatggaagggcaactgat 66 Query: 431 gttgctcttggatggncngntgcactangatccccgttcacctttgctactac 483 |||||||| |||||| | | ||| || |||| || ||||| ||||||||||| Sbjct: 67 gttgctctaggatggtcagttgcgctgggatctcccttcacatttgctactac 119
>emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase Length = 2036 Score = 117 bits (59), Expect = 4e-23 Identities = 280/354 (79%) Strand = Plus / Plus Query: 83 gctggattcactgaggaggacggaacattgggggacatatgggagacagtttcaggcagc 142 |||||||| | ||||||| | ||||| | || ||||||||||| || | |||||||| Sbjct: 478 gctggatttagtgaggagaaaggaactctaggtgacatatgggaaactatatcaggcagt 537 Query: 143 gaccttgtgctgctgttgatctcagattctgcacaggcagacaactatgagaagatcttc 202 || ||||| ||||||| || || ||||||||||||||||| || |||||||| || ||| Sbjct: 538 gatcttgtattgctgttaatttctgattctgcacaggcagataattatgagaaaatattc 597 Query: 203 tctcacatgaaaccaaacagcattcttggtttatctcatgggtttctccttggtcatttg 262 || ||| |||| ||||||||||| ||||| | || || || ||||| ||||| || || Sbjct: 598 tcccacttgaagccaaacagcatacttgggctgtcccacggttttcttcttgggcactta 657 Query: 263 caatcacatggccttgatttcccaaagaacatcagcgtggttgctgtatgtcccaaggga 322 || ||| ||| |||||||| || || || |||| || ||||||| ||||| |||||| Sbjct: 658 cagtcaattggacttgattttcccaaaaatttcagtgtaattgctgtgtgtccaaaggga 717 Query: 323 atgggcccgtcggttcggagactgtatgttcagggcaaggaagtaaacggtgctggcatc 382 |||||||| || || |||| |||||||| || |||||||| ||||||||||||| || Sbjct: 718 atgggcccatctgtaaggaggctgtatgtacaaggcaaggagataaacggtgctggaatt 777 Query: 383 aacgctagctttgctgttcaccangatgttgatggaagggcaactgatgttgct 436 || | || |||| || ||||| ||||| ||||| ||||| ||| |||||||| Sbjct: 778 aattcaagttttggagtccaccaggatgtggatggcagggctactaatgttgct 831
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 8e-15 Identities = 111/133 (83%) Strand = Plus / Plus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 ||||||||||| ||||||| |||||||| ||||| |||||||||| |||||| || ||| Sbjct: 2847284 agattggtctccggaaaggctccaagtcatttgatgaagcacgtgctgctggtttttctg 2847343 Query: 96 aggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctgc 155 | ||| ||||| ||||| || || |||||||| ||||| ||||| ||||| ||| ||| Sbjct: 2847344 aagagagtggaaccttgggagatatttgggagactgtttctggcagtgacctcgtgttgc 2847403 Query: 156 tgttgatctcaga 168 ||||||| ||||| Sbjct: 2847404 tgttgatatcaga 2847416
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 89.7 bits (45), Expect = 8e-15 Identities = 111/133 (83%) Strand = Plus / Plus Query: 36 agattggtctcaggaaaggttccaagtcttttgaggaagcacgtggtgctggattcactg 95 ||||||||||| ||||||| |||||||| ||||| |||||||||| |||||| || ||| Sbjct: 115512 agattggtctccggaaaggctccaagtcatttgatgaagcacgtgctgctggtttttctg 115571 Query: 96 aggaggacggaacattgggggacatatgggagacagtttcaggcagcgaccttgtgctgc 155 | ||| ||||| ||||| || || |||||||| ||||| ||||| ||||| ||| ||| Sbjct: 115572 aagagagtggaaccttgggagatatttgggagactgtttctggcagtgacctcgtgttgc 115631 Query: 156 tgttgatctcaga 168 ||||||| ||||| Sbjct: 115632 tgttgatatcaga 115644
>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete cds, clone: RAFL22-45-C07 Length = 1266 Score = 83.8 bits (42), Expect = 5e-13 Identities = 166/209 (79%) Strand = Plus / Plus Query: 278 gatttcccaaagaacatcagcgtggttgctgtatgtcccaagggaatgggcccgtcggtt 337 |||||||||||||||||||| ||||| |||||||| || ||||||||||| || || || Sbjct: 19 gatttcccaaagaacatcagtgtggtcgctgtatgccctaagggaatgggtccttctgtg 78 Query: 338 cggagactgtatgttcagggcaaggaagtaaacggtgctggcatcaacgctagctttgct 397 |||| || || || || || || ||| | ||||||||||| |||||||| || ||||| Sbjct: 79 aggaggctttacgtccaaggaaaagaaattaacggtgctggaatcaacgccagttttgca 138 Query: 398 gttcaccangatgttgatggaagggcaactgatgttgctcttggatggncngntgcacta 457 || ||||| |||||||| || || || | |||||||| | |||||| | | ||||| Sbjct: 139 gtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagtagcactt 198 Query: 458 ngatccccgttcacctttgctactactct 486 | || ||||| || |||||||||||||| Sbjct: 199 ggttctccgtttacttttgctactactct 227
>emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons 1-9 Length = 3343 Score = 81.8 bits (41), Expect = 2e-12 Identities = 164/205 (80%) Strand = Plus / Plus Query: 174 cacaggcagacaactatgagaagatcttctctcacatgaaaccaaacagcattcttggtt 233 |||||||||| || |||||||| || ||||| ||| |||| ||||||||||| ||||| Sbjct: 1475 cacaggcagataattatgagaaaatattctcccacttgaagccaaacagcatacttgggc 1534 Query: 234 tatctcatgggtttctccttggtcatttgcaatcacatggccttgatttcccaaagaaca 293 | || || || ||||| ||||| || || || ||| ||| |||||||| || || || Sbjct: 1535 tgtcccacggttttcttcttgggcacttacagtcaattggacttgattttcccaaaaatt 1594 Query: 294 tcagcgtggttgctgtatgtcccaagggaatgggcccgtcggttcggagactgtatgttc 353 |||| || ||||||| ||||| |||||||||||||| || || |||| |||||||| | Sbjct: 1595 tcagtgtaattgctgtgtgtccaaagggaatgggcccatctgtaaggaggctgtatgtac 1654 Query: 354 agggcaaggaagtaaacggtgctgg 378 | |||||||| ||||||||||||| Sbjct: 1655 aaggcaaggagataaacggtgctgg 1679
>emb|CR456621.10| Zebrafish DNA sequence from clone DKEY-37G16 in linkage group 14, complete sequence Length = 177017 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 aaccaaacagcattcttggtttatct 238 |||||||||||| ||||||||||||| Sbjct: 163896 aaccaaacagcaatcttggtttatct 163921
>emb|BX950179.6| Zebrafish DNA sequence from clone DKEY-27P23 in linkage group 5, complete sequence Length = 235445 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 accaaacagcattcttggtttatct 238 ||||||||||| ||||||||||||| Sbjct: 2542 accaaacagcagtcttggtttatct 2566
>emb|CR896874.1| Zebrafish DNA sequence from clone DKEY-27P23 in linkage group 5, complete sequence Length = 12588 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 accaaacagcattcttggtttatct 238 ||||||||||| ||||||||||||| Sbjct: 2542 accaaacagcagtcttggtttatct 2566
>emb|BX465185.8| Zebrafish DNA sequence from clone CH211-39F23 in linkage group 23, complete sequence Length = 148690 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 accaaacagcattcttggtttatct 238 ||||||||||| ||||||||||||| Sbjct: 62145 accaaacagcagtcttggtttatct 62169
>emb|BX663520.9| Zebrafish DNA sequence from clone DKEY-105H12 in linkage group 15, complete sequence Length = 248279 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 accaaacagcattcttggtttatct 238 ||||||||||| ||||||||||||| Sbjct: 209715 accaaacagcagtcttggtttatct 209691
>emb|BX119985.7| Zebrafish DNA sequence from clone CH211-270B10 in linkage group 11, complete sequence Length = 172959 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 accaaacagcattcttggtttatct 238 ||||||||||| ||||||||||||| Sbjct: 4928 accaaacagcagtcttggtttatct 4952
>emb|CR383665.9| Zebrafish DNA sequence from clone DKEY-3G23 in linkage group 14, complete sequence Length = 120923 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 accaaacagcattcttggtttatct 238 ||||||||||| ||||||||||||| Sbjct: 30350 accaaacagcaatcttggtttatct 30374
>emb|AL935198.6| Zebrafish DNA sequence from clone CH211-198E13, complete sequence Length = 200697 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 accaaacagcattcttggtttatct 238 ||||||||||| ||||||||||||| Sbjct: 197677 accaaacagcagtcttggtttatct 197701
>gb|AC101887.10| Mus musculus chromosome 1, clone RP23-415F2, complete sequence Length = 197942 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 tgggagacagtttcaggcag 141 |||||||||||||||||||| Sbjct: 88624 tgggagacagtttcaggcag 88605
>gb|AC147158.3| Pan troglodytes BAC clone CH251-137M10 from Y, complete sequence Length = 167138 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 tgaaaccaaacagcattcttggtt 233 |||||||||||||| ||||||||| Sbjct: 23952 tgaaaccaaacagctttcttggtt 23929
>gb|AC142354.3| Pan troglodytes BAC clone RP43-21M11 from Y, complete sequence Length = 163480 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 tgaaaccaaacagcattcttggtt 233 |||||||||||||| ||||||||| Sbjct: 132752 tgaaaccaaacagctttcttggtt 132729
>gb|AC096852.3| Sus scrofa clone RP44-524D11, complete sequence Length = 69000 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aaaccaaacagcattcttgg 231 |||||||||||||||||||| Sbjct: 31407 aaaccaaacagcattcttgg 31426
>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9, complete sequence Length = 164559 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agacaactatgagaagatct 200 |||||||||||||||||||| Sbjct: 36907 agacaactatgagaagatct 36888
>ref|XM_505537.1| Yarrowia lipolytica CLIB122, YALI0F17468g predicted mRNA Length = 3408 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 atgaaaccaaacagcattct 228 |||||||||||||||||||| Sbjct: 1964 atgaaaccaaacagcattct 1945
>dbj|BS000641.4| Pan troglodytes chromosome Y clone: PTB-094I22, complete sequence Length = 190308 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 tgaaaccaaacagcattcttggtt 233 |||||||||||||| ||||||||| Sbjct: 121438 tgaaaccaaacagctttcttggtt 121461
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 tgaaaccaaacagcattcttggtt 233 |||||||||||||| ||||||||| Sbjct: 17284244 tgaaaccaaacagctttcttggtt 17284221
>dbj|BS000573.1| Pan troglodytes chromosome Y clone:RP43-021M11, complete sequences Length = 163477 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 tgaaaccaaacagcattcttggtt 233 |||||||||||||| ||||||||| Sbjct: 30729 tgaaaccaaacagctttcttggtt 30752
>emb|BX649408.3| Zebrafish DNA sequence from clone DKEYP-18C4 in linkage group 4, complete sequence Length = 96612 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 caaacagcattcttggttta 235 |||||||||||||||||||| Sbjct: 11986 caaacagcattcttggttta 11967
>gb|AY746497.1| Enterobacteria phage JS98 contig9 genomic sequence Length = 48675 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ctcatgggtttctccttggt 256 |||||||||||||||||||| Sbjct: 22097 ctcatgggtttctccttggt 22078
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 atgaaaccaaacagcattct 228 |||||||||||||||||||| Sbjct: 2334550 atgaaaccaaacagcattct 2334531 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,800,706 Number of Sequences: 3902068 Number of extensions: 3800706 Number of successful extensions: 106176 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105789 Number of HSP's gapped (non-prelim): 382 length of query: 494 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 472 effective length of database: 17,147,199,772 effective search space: 8093478292384 effective search space used: 8093478292384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
