ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6g24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X82832.1|HVUDEC H.vulgare mRNA for uroporphyrinogen decarbox... 918 0.0
2gb|AF058763.1|AF058763 Zea mays uroporphyrinogen decarboxylase (... 504 e-139
3dbj|AK070859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 496 e-137
4gb|AF119232.1|AF119232 Oryza sativa uroporphyrinogen decarboxyla... 490 e-135
5gb|AY111127.1| Zea mays CL1743_1 mRNA sequence 482 e-133
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 240 3e-60
7gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 240 3e-60
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 240 3e-60
9gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 220 3e-54
10ref|NM_129611.3| Arabidopsis thaliana uroporphyrinogen decarboxy... 100 8e-18
11gb|AY142634.1| Arabidopsis thaliana putative uroporphyrinogen de... 100 8e-18
12gb|AY035057.1| Arabidopsis thaliana putative uroporphyrinogen de... 100 8e-18
13emb|BX820790.1|CNS0AA7W Arabidopsis thaliana Full-length cDNA Co... 100 8e-18
14emb|BX820062.1|CNS0AA6S Arabidopsis thaliana Full-length cDNA Co... 100 8e-18
15emb|BX819829.1|CNS0AA6W Arabidopsis thaliana Full-length cDNA Co... 100 8e-18
16emb|BX819769.1|CNS0AA6J Arabidopsis thaliana Full-length cDNA Co... 100 8e-18
17emb|X82833.1|NTUDEC N.tabacum mRNA for uroporphyrinogen decarbox... 70 7e-09
18dbj|AB050117.1| Amaranthus tricolor UROD mRNA for uroporphyrinog... 68 3e-08
19gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map ... 62 2e-06
20gb|AC149472.23| Medicago truncatula clone mth2-77f21, complete s... 58 3e-05
21emb|BX470127.2| Mouse DNA sequence from clone RP24-280A6 on chro... 44 0.41
22emb|AL683826.14| Human DNA sequence from clone XXyac-21CG7 on ch... 42 1.6
23gb|AC096759.3| Homo sapiens BAC clone RP11-567N4 from 4, complet... 42 1.6
24dbj|BS000079.1| Pan troglodytes chromosome 22 clone:RP43-047O12,... 42 1.6
25dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.6
26dbj|AP000953.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 1.6
27emb|AL646048.22| Mouse DNA sequence from clone RP23-289C5 on chr... 42 1.6
28ref|NM_111542.1| Arabidopsis thaliana unknown protein AT3G66652 ... 40 6.4
29gb|AF386526.1| Shigella flexneri 2a str. 301 virulence plasmid p... 40 6.4
30gb|AC150408.2| Branchiostoma floridae clone CH302-56A5, complete... 40 6.4
31gb|AY563922.1| Brachystigma wrightii isolate brwr1 maturase K (m... 40 6.4
32gb|AF531781.1| Pedicularis sylvatica trnK gene, intron; and matu... 40 6.4
33ref|XM_710711.1| Candida albicans SC5314 regulator of filamentou... 40 6.4
34ref|XM_710662.1| Candida albicans SC5314 regulator of filamentou... 40 6.4
35gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, com... 40 6.4
36ref|XM_388575.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 6.4
37ref|XM_806416.1| Trypanosoma cruzi strain CL Brener peroxin 14 (... 40 6.4
38gb|AC126553.4| Mus musculus BAC clone RP23-448L16 from chromosom... 40 6.4
39gb|AC124567.4| Mus musculus BAC clone RP23-145E22 from 6, comple... 40 6.4
40ref|XM_883627.1| Candida albicans SC5314 hypothetical protein (C... 40 6.4
41ref|XM_715226.1| Candida albicans SC5314 hypothetical protein (C... 40 6.4
42ref|XM_715227.1| Candida albicans SC5314 hypothetical protein (C... 40 6.4
43gb|AC158144.13| Mus musculus chromosome 7, clone RP23-82N3, comp... 40 6.4
44emb|AL591398.2| Human DNA sequence from clone RP11-81C12 on chro... 40 6.4
45emb|AL590628.6| Human DNA sequence from clone RP11-252O7 on chro... 40 6.4
46emb|AL139084.9| Human DNA sequence from clone RP11-318G11 on chr... 40 6.4
47gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 m... 40 6.4
48emb|AL391753.1|SFPWR100 Shigella flexneri virulence plasmid pWR1... 40 6.4
49gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, com... 40 6.4
50gb|AC153921.5| Mus musculus 10 BAC RP23-89C21 (Roswell Park Canc... 40 6.4
51gb|AF348706.1|AF348706 Shigella flexneri large virulence plasmid... 40 6.4
52gb|AF330198.1|AF330198 Candida albicans regulator of filamentous... 40 6.4
53gb|AC036106.6|AC036106 Arabidopsis thaliana chromosome 3 BAC T8E... 40 6.4
54emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chr... 40 6.4
55gb|AC153603.3| Mus musculus 6 BAC RP23-315I7 (Roswell Park Cance... 40 6.4
56gb|AC154823.2| Mus musculus BAC clone RP24-538J1 from 17, comple... 40 6.4
57gb|AC104921.9| Mus musculus chromosome 7, clone RP23-474B13, com... 40 6.4
58emb|AL163612.5|CNS01RII Human chromosome 14 DNA sequence BAC R-3... 40 6.4
59dbj|D50601.1|SHFORF Shigella sonnei genes for 26 ORFs, complete cds 40 6.4
60gb|U94325.1|FRU94325 Fugu rubripes Tuple1/HirA gene, complete cds 40 6.4
61dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 40 6.4
62emb|AL671920.9| Mouse DNA sequence from clone RP23-445A22 on chr... 40 6.4
63gb|CP000035.1| Shigella dysenteriae Sd197 plasmid pSD1_197, comp... 40 6.4
64gb|CP000039.1| Shigella sonnei Ss046 plasmid pSS_046, complete s... 40 6.4 
>emb|X82832.1|HVUDEC H.vulgare mRNA for uroporphyrinogen decarboxylase
          Length = 1208

 Score =  918 bits (463), Expect = 0.0
 Identities = 470/471 (99%), Gaps = 1/471 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tacatgaagtagctaccaaaatctctgtgagaaatatcctttgttccgtgaaagatcaga 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  tacatgaag-agctaccaaaatctctgtgagaaatatcctttgttccgtgaaagatcaga 101

                                                                       
Query: 61  aaatgttgaccttgttgttgagatctctctgcagccatggaaggttttcaagcctgatgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 aaatgttgaccttgttgttgagatctctctgcagccatggaaggttttcaagcctgatgg 161

                                                                       
Query: 121 agttatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 agttatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacat 221

                                                                       
Query: 181 tgtgaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tgtgaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacga 281

                                                                       
Query: 241 agtcagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaatttgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agtcagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaatttgct 341

                                                                       
Query: 301 gcgaggagaggttaagaatgaagctgctgtgcttggttttgttggagctccctttacctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gcgaggagaggttaagaatgaagctgctgtgcttggttttgttggagctccctttacctt 401

                                                                       
Query: 361 ggcatcttattgcgtggagggaggttcatccaagaatttctcaaagataaagagaatggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggcatcttattgcgtggagggaggttcatccaagaatttctcaaagataaagagaatggc 461

                                                              
Query: 421 cttcgcagagccagcgattctacataatttgctacagaagtttacaacttc 471
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 cttcgcagagccagcgattctacataatttgctacagaagtttacaacttc 512
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>gb|AF058763.1|AF058763 Zea mays uroporphyrinogen decarboxylase (les22) mRNA, complete cds
          Length = 1663

 Score =  504 bits (254), Expect = e-139
 Identities = 389/434 (89%)
 Strand = Plus / Plus

                                                                       
Query: 35  tatcctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcag 94
           ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| |||| 
Sbjct: 400 tatccttcgttccgtgaaagatcagaaaatgtcgacctagttgttgagatctctttgcaa 459

                                                                       
Query: 95  ccatggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccactt 154
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 460 ccatggaaggttttcaagcctgatggagtcatcttgttctcggacatccttactccactt 519

                                                                       
Query: 155 cctgggatgaacataccttttgacattgtgaaaggaaaaggtccagtgatatatgatccc 214
           |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| 
Sbjct: 520 cctgggatgaacataccttttgacattgtgaagggaaaaggtccagtgatctatgatcca 579

                                                                       
Query: 215 ttaagaacagcagcggctgtgaacgaagtcagagaattcgttccagaggagtgggtccct 274
           || ||||| ||||| |||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 580 ttgagaacggcagcagctgtgaatgaagtcagagaatttgttcctgaggagtgggtccct 639

                                                                       
Query: 275 tatgtaggacaggctttaaatttgctgcgaggagaggttaagaatgaagctgctgtgctt 334
           ||||| || |||||| | ||| |  || ||  ||||||||| |||||||||||||| || 
Sbjct: 640 tatgtggggcaggctctgaatattttgagacaagaggttaaaaatgaagctgctgtacta 699

                                                                       
Query: 335 ggttttgttggagctccctttaccttggcatcttattgcgtggagggaggttcatccaag 394
           ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 700 ggttttgttggagctccgtttaccttggcatcttattgtgtggaaggaggttcatcaaag 759

                                                                       
Query: 395 aatttctcaaagataaagagaatggccttcgcagagccagcgattctacataatttgcta 454
           || ||  ||  ||| |||| |||||||||| |||| ||||||||| |||| |||||||||
Sbjct: 760 aactttacattgattaagaaaatggccttctcagaaccagcgattttacacaatttgcta 819

                         
Query: 455 cagaagtttacaac 468
           |||||||| |||||
Sbjct: 820 cagaagttcacaac 833
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>dbj|AK070859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065H03, full
           insert sequence
          Length = 1596

 Score =  496 bits (250), Expect = e-137
 Identities = 379/422 (89%)
 Strand = Plus / Plus

                                                                       
Query: 44  ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 103
           ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 345 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaaccatggaag 404

                                                                       
Query: 104 gttttcaagcctgatggagttatcttgttctcggatatccttactccacttcctgggatg 163
           ||||||||||| |||||||||||| ||||||| ||||||||||| || ||||||||||||
Sbjct: 405 gttttcaagcccgatggagttatcctgttctcagatatccttacaccgcttcctgggatg 464

                                                                       
Query: 164 aacataccttttgacattgtgaaaggaaaaggtccagtgatatatgatcccttaagaaca 223
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 465 aacataccttttgacattgtgaaaggaaaaggtccagtgatatttgatcccttgagaaca 524

                                                                       
Query: 224 gcagcggctgtgaacgaagtcagagaattcgttccagaggagtgggtcccttatgtagga 283
           ||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||| || 
Sbjct: 525 gcagctgctgtgaatgaggtcagagaatttgttccagaggagtgggtcccatatgttggg 584

                                                                       
Query: 284 caggctttaaatttgctgcgaggagaggttaagaatgaagctgctgtgcttggttttgtt 343
           |||||||||||  |  |||| | ||||||||| ||||||||||| ||| | || ||||||
Sbjct: 585 caggctttaaacattttgcgggaagaggttaacaatgaagctgccgtgttgggctttgtt 644

                                                                       
Query: 344 ggagctccctttaccttggcatcttattgcgtggagggaggttcatccaagaatttctca 403
           |||||||||||||| |||||||| ||||| || || ||||||||||| || || || |||
Sbjct: 645 ggagctccctttacattggcatcctattgtgttgaaggaggttcatcaaaaaacttttca 704

                                                                       
Query: 404 aagataaagagaatggccttcgcagagccagcgattctacataatttgctacagaagttt 463
           ||||| |||| |||||||||| |||| |||| |||||| ||||||||||||||||| |||
Sbjct: 705 aagattaagaaaatggccttctcagaaccagagattctgcataatttgctacagaaattt 764

             
Query: 464 ac 465
           ||
Sbjct: 765 ac 766
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>gb|AF119232.1|AF119232 Oryza sativa uroporphyrinogen decarboxylase UROD-like mRNA sequence
          Length = 970

 Score =  490 bits (247), Expect = e-135
 Identities = 385/431 (89%)
 Strand = Plus / Plus

                                                                       
Query: 35  tatcctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcag 94
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 124 tatccttcgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaa 183

                                                                       
Query: 95  ccatggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccactt 154
           |||||||||||||||||||| |||||||||||| ||||||| ||||||||||| || |||
Sbjct: 184 ccatggaaggttttcaagcccgatggagttatcctgttctcagatatccttacaccgctt 243

                                                                       
Query: 155 cctgggatgaacataccttttgacattgtgaaaggaaaaggtccagtgatatatgatccc 214
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 244 cctgggatgaacataccttttgacattgtgaaaggaaaaggtccagtgatatttgatccc 303

                                                                       
Query: 215 ttaagaacagcagcggctgtgaacgaagtcagagaattcgttccagaggagtgggtccct 274
           || ||||||||||| |||| ||| || ||||||||||| |||||||||||||||||||| 
Sbjct: 304 ttgagaacagcagctgctgcgaatgaggtcagagaatttgttccagaggagtgggtccca 363

                                                                       
Query: 275 tatgtaggacaggctttaaatttgctgcgaggagaggttaagaatgaagctgctgtgctt 334
           ||||| || |||||||||||  |  |||| | ||||||||| ||||||||||| ||| | 
Sbjct: 364 tatgttgggcaggctttaaacattttgcgggaagaggttaacaatgaagctgccgtgttg 423

                                                                       
Query: 335 ggttttgttggagctccctttaccttggcatcttattgcgtggagggaggttcatccaag 394
           || |||||||||||||| |||||||||||||| ||||| || || ||||||||||| || 
Sbjct: 424 ggctttgttggagctccgtttaccttggcatcctattgtgttgaaggaggttcatcaaaa 483

                                                                       
Query: 395 aatttctcaaagataaagagaatggccttcgcagagccagcgattctacataatttgcta 454
           || || |||||||| |||| |||||||| | |||| |||| |||||| ||||||||||||
Sbjct: 484 aacttttcaaagattaagaaaatggcctcctcagaaccagagattctgcataatttgcta 543

                      
Query: 455 cagaagtttac 465
           ||||| |||||
Sbjct: 544 cagaaatttac 554
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>gb|AY111127.1| Zea mays CL1743_1 mRNA sequence
          Length = 1602

 Score =  482 bits (243), Expect = e-133
 Identities = 385/434 (88%)
 Strand = Plus / Plus

                                                                       
Query: 35  tatcctttgttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcag 94
           ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| |||| 
Sbjct: 400 tatccttcgttccgtgaaagatcagaaaatgtcgacctagttgttgagatctctttgcaa 459

                                                                       
Query: 95  ccatggaaggttttcaagcctgatggagttatcttgttctcggatatccttactccactt 154
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 460 ccatggaaggttttcaagcctgatggagtcatcttgttctcggacatccttactccactt 519

                                                                       
Query: 155 cctgggatgaacataccttttgacattgtgaaaggaaaaggtccagtgatatatgatccc 214
           |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| 
Sbjct: 520 cctgggatgaacataccttttgacattgtgaagggaaaaggtccagtgatctatgatcca 579

                                                                       
Query: 215 ttaagaacagcagcggctgtgaacgaagtcagagaattcgttccagaggagtgggtccct 274
           || ||||| ||||| |||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 580 ttgagaacggcagcagctgtgaatgaagtcagagaatttgttcctgaggagtgggtccct 639

                                                                       
Query: 275 tatgtaggacaggctttaaatttgctgcgaggagaggttaagaatgaagctgctgtgctt 334
           ||||| || |||||| | ||| |  || ||  |||||||     |||||||||||| || 
Sbjct: 640 tatgtggggcaggctctgaatattttgagacaagaggttnnnnntgaagctgctgtacta 699

                                                                       
Query: 335 ggttttgttggagctccctttaccttggcatcttattgcgtggagggaggttcatccaag 394
           ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 700 ggttttgttggagctccgtttaccttggcatcttattgtgtggaaggaggttcatcaaag 759

                                                                       
Query: 395 aatttctcaaagataaagagaatggccttcgcagagccagcgattctacataatttgcta 454
           || ||  ||  ||| |||| |||||||||| |||| ||||||||| |||| |||||||||
Sbjct: 760 aactttacattgattaagaaaatggccttctcagaaccagcgattttacacaatttgcta 819

                         
Query: 455 cagaagtttacaac 468
           |||||||| |||||
Sbjct: 820 cagaagttcacaac 833
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  240 bits (121), Expect = 3e-60
 Identities = 160/173 (92%)
 Strand = Plus / Plus

                                                                            
Query: 122      gttatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacatt 181
                |||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 12504787 gttatcctgttctcagatatccttacaccgcttcctgggatgaacataccttttgacatt 12504846

                                                                            
Query: 182      gtgaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaa 241
                ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || 
Sbjct: 12504847 gtgaaaggaaaaggtccagtgatatttgatcccttgagaacagcagctgctgtgaatgag 12504906

                                                                     
Query: 242      gtcagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 294
                ||||||||||| |||||||||||||||||||| ||||| || |||||||||||
Sbjct: 12504907 gtcagagaatttgttccagaggagtgggtcccatatgttgggcaggctttaaa 12504959



 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Minus

                                                                            
Query: 124      tatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacattgt 183
                |||| ||||||| ||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 12620107 tatcctgttctcagatatccttacaccgcttcctcggatgaacataccttttgacattgt 12620048

                                                                            
Query: 184      gaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaagt 243
                ||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||| || ||
Sbjct: 12620047 gaaaggaaaaggttcagtgatatttgatcccttgagaacagcagctgctgtgaatgaggt 12619988

                                                                   
Query: 244      cagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 294
                ||||||||| |||||||||||||||||||| ||||| || |||||||||||
Sbjct: 12619987 cagagaatttgttccagaggagtgggtcccgtatgttgggcaggctttaaa 12619937



 Score =  135 bits (68), Expect = 1e-28
 Identities = 77/80 (96%)
 Strand = Plus / Plus

                                                                            
Query: 44       ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 103
                ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 12504514 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaaccatggaag 12504573

                                    
Query: 104      gttttcaagcctgatggagt 123
                ||||||||||| ||||||||
Sbjct: 12504574 gttttcaagcccgatggagt 12504593



 Score =  107 bits (54), Expect = 3e-20
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                            
Query: 309      aggttaagaatgaagctgctgtgcttggttttgttggagctccctttaccttggcatctt 368
                ||||||| ||||||||||| ||| | || |||||||||||||||||||| |||||||| |
Sbjct: 12505754 aggttaacaatgaagctgccgtgttgggctttgttggagctccctttacattggcatcct 12505813

                                                                            
Query: 369      attgcgtggagggaggttcatccaagaatttctcaaagataaagagaatggccttcgcag 428
                |||| || || ||||||||||| || || || |||||||| |||| |||||||||| |||
Sbjct: 12505814 attgtgttgaaggaggttcatcaaaaaacttttcaaagattaagaaaatggccttctcag 12505873

                      
Query: 429      agccag 434
                | ||||
Sbjct: 12505874 aaccag 12505879



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 48       gtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaaggttt 107
                ||||||||||||||  |||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 12620369 gtgaaagatcagaacttgttgaccttgttgttgaaatctctctacaaccatggaaggttt 12620310

                                
Query: 108      tcaagcctgatggagt 123
                ||| ||| ||||||||
Sbjct: 12620309 tcacgcccgatggagt 12620294



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                            
Query: 336      gttttgttggagctccctttaccttggcatcttattgcgtggagggaggttcatccaaga 395
                |||||||||||||||||||||| |||||||| ||||| || || ||||||||||| ||||
Sbjct: 12618537 gttttgttggagctccctttacgttggcatcctattgtgttgaaggaggttcatcaaaga 12618478

                                            
Query: 396      atttctcaaagataaagagaatggcctt 423
                |||| |||||||| || | |||||||||
Sbjct: 12618477 atttttcaaagattaaaaaaatggcctt 12618450



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 436      gattctacataatttgctacagaagtttac 465
                |||||| ||||||||||||||||| |||||
Sbjct: 12506284 gattctgcataatttgctacagaaatttac 12506313
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>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score =  240 bits (121), Expect = 3e-60
 Identities = 160/173 (92%)
 Strand = Plus / Minus

                                                                         
Query: 122   gttatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacatt 181
             |||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 83154 gttatcctgttctcagatatccttacaccgcttcctgggatgaacataccttttgacatt 83095

                                                                         
Query: 182   gtgaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaa 241
             ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || 
Sbjct: 83094 gtgaaaggaaaaggtccagtgatatttgatcccttgagaacagcagctgctgtgaatgag 83035

                                                                  
Query: 242   gtcagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 294
             ||||||||||| |||||||||||||||||||| ||||| || |||||||||||
Sbjct: 83034 gtcagagaatttgttccagaggagtgggtcccatatgttgggcaggctttaaa 82982



 Score =  135 bits (68), Expect = 1e-28
 Identities = 77/80 (96%)
 Strand = Plus / Minus

                                                                         
Query: 44    ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 103
             ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 83427 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaaccatggaag 83368

                                 
Query: 104   gttttcaagcctgatggagt 123
             ||||||||||| ||||||||
Sbjct: 83367 gttttcaagcccgatggagt 83348



 Score =  107 bits (54), Expect = 3e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                         
Query: 309   aggttaagaatgaagctgctgtgcttggttttgttggagctccctttaccttggcatctt 368
             ||||||| ||||||||||| ||| | || |||||||||||||||||||| |||||||| |
Sbjct: 82187 aggttaacaatgaagctgccgtgttgggctttgttggagctccctttacattggcatcct 82128

                                                                         
Query: 369   attgcgtggagggaggttcatccaagaatttctcaaagataaagagaatggccttcgcag 428
             |||| || || ||||||||||| || || || |||||||| |||| |||||||||| |||
Sbjct: 82127 attgtgttgaaggaggttcatcaaaaaacttttcaaagattaagaaaatggccttctcag 82068

                   
Query: 429   agccag 434
             | ||||
Sbjct: 82067 aaccag 82062



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 436   gattctacataatttgctacagaagtttac 465
             |||||| ||||||||||||||||| |||||
Sbjct: 81657 gattctgcataatttgctacagaaatttac 81628
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  240 bits (121), Expect = 3e-60
 Identities = 160/173 (92%)
 Strand = Plus / Plus

                                                                            
Query: 122      gttatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacatt 181
                |||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 12501550 gttatcctgttctcagatatccttacaccgcttcctgggatgaacataccttttgacatt 12501609

                                                                            
Query: 182      gtgaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaa 241
                ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || 
Sbjct: 12501610 gtgaaaggaaaaggtccagtgatatttgatcccttgagaacagcagctgctgtgaatgag 12501669

                                                                     
Query: 242      gtcagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 294
                ||||||||||| |||||||||||||||||||| ||||| || |||||||||||
Sbjct: 12501670 gtcagagaatttgttccagaggagtgggtcccatatgttgggcaggctttaaa 12501722



 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Minus

                                                                            
Query: 124      tatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacattgt 183
                |||| ||||||| ||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 12616870 tatcctgttctcagatatccttacaccgcttcctcggatgaacataccttttgacattgt 12616811

                                                                            
Query: 184      gaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaagt 243
                ||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||| || ||
Sbjct: 12616810 gaaaggaaaaggttcagtgatatttgatcccttgagaacagcagctgctgtgaatgaggt 12616751

                                                                   
Query: 244      cagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 294
                ||||||||| |||||||||||||||||||| ||||| || |||||||||||
Sbjct: 12616750 cagagaatttgttccagaggagtgggtcccgtatgttgggcaggctttaaa 12616700



 Score =  135 bits (68), Expect = 1e-28
 Identities = 77/80 (96%)
 Strand = Plus / Plus

                                                                            
Query: 44       ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 103
                ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 12501277 ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctacaaccatggaag 12501336

                                    
Query: 104      gttttcaagcctgatggagt 123
                ||||||||||| ||||||||
Sbjct: 12501337 gttttcaagcccgatggagt 12501356



 Score =  107 bits (54), Expect = 3e-20
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                            
Query: 309      aggttaagaatgaagctgctgtgcttggttttgttggagctccctttaccttggcatctt 368
                ||||||| ||||||||||| ||| | || |||||||||||||||||||| |||||||| |
Sbjct: 12502517 aggttaacaatgaagctgccgtgttgggctttgttggagctccctttacattggcatcct 12502576

                                                                            
Query: 369      attgcgtggagggaggttcatccaagaatttctcaaagataaagagaatggccttcgcag 428
                |||| || || ||||||||||| || || || |||||||| |||| |||||||||| |||
Sbjct: 12502577 attgtgttgaaggaggttcatcaaaaaacttttcaaagattaagaaaatggccttctcag 12502636

                      
Query: 429      agccag 434
                | ||||
Sbjct: 12502637 aaccag 12502642



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 48       gtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaaggttt 107
                ||||||||||||||  |||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 12617132 gtgaaagatcagaacttgttgaccttgttgttgaaatctctctacaaccatggaaggttt 12617073

                                
Query: 108      tcaagcctgatggagt 123
                ||| ||| ||||||||
Sbjct: 12617072 tcacgcccgatggagt 12617057



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                            
Query: 336      gttttgttggagctccctttaccttggcatcttattgcgtggagggaggttcatccaaga 395
                |||||||||||||||||||||| |||||||| ||||| || || ||||||||||| ||||
Sbjct: 12615300 gttttgttggagctccctttacgttggcatcctattgtgttgaaggaggttcatcaaaga 12615241

                                            
Query: 396      atttctcaaagataaagagaatggcctt 423
                |||| |||||||| || | |||||||||
Sbjct: 12615240 atttttcaaagattaaaaaaatggcctt 12615213



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 436      gattctacataatttgctacagaagtttac 465
                |||||| ||||||||||||||||| |||||
Sbjct: 12503047 gattctgcataatttgctacagaaatttac 12503076
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>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                         
Query: 124   tatcttgttctcggatatccttactccacttcctgggatgaacataccttttgacattgt 183
             |||| ||||||| ||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 56882 tatcctgttctcagatatccttacaccgcttcctcggatgaacataccttttgacattgt 56941

                                                                         
Query: 184   gaaaggaaaaggtccagtgatatatgatcccttaagaacagcagcggctgtgaacgaagt 243
             ||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||| || ||
Sbjct: 56942 gaaaggaaaaggttcagtgatatttgatcccttgagaacagcagctgctgtgaatgaggt 57001

                                                                
Query: 244   cagagaattcgttccagaggagtgggtcccttatgtaggacaggctttaaa 294
             ||||||||| |||||||||||||||||||| ||||| || |||||||||||
Sbjct: 57002 cagagaatttgttccagaggagtgggtcccgtatgttgggcaggctttaaa 57052



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                         
Query: 336   gttttgttggagctccctttaccttggcatcttattgcgtggagggaggttcatccaaga 395
             |||||||||||||||||||||| |||||||| ||||| || || ||||||||||| ||||
Sbjct: 58452 gttttgttggagctccctttacgttggcatcctattgtgttgaaggaggttcatcaaaga 58511

                                         
Query: 396   atttctcaaagataaagagaatggcctt 423
             |||| |||||||| || | |||||||||
Sbjct: 58512 atttttcaaagattaaaaaaatggcctt 58539



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                         
Query: 48    gtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaaggttt 107
             ||||||||||||||  |||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 56620 gtgaaagatcagaacttgttgaccttgttgttgaaatctctctacaaccatggaaggttt 56679

                             
Query: 108   tcaagcctgatggagt 123
             ||| ||| ||||||||
Sbjct: 56680 tcacgcccgatggagt 56695
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>ref|NM_129611.3| Arabidopsis thaliana uroporphyrinogen decarboxylase AT2G40490 mRNA,
           complete cds
          Length = 1473

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 17  caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 76
           |||| |||||||||||| |||||||  ||| | || |||||||| ||||  || ||||| 
Sbjct: 349 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 408

                                                                       
Query: 77  gttgagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcg 136
           || || || ||| |||||||||||||||| || ||||| ||||| || ||  ||||||| 
Sbjct: 409 gtggaaatttctttgcagccatggaaggtgtttaagccagatggggtgattctgttctca 468

                                                                       
Query: 137 gatatccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggt 196
           || || || |||||| |  |||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 469 gacattctcactccattgtctggaatgaacatacctttcgacattgttaaaggaaaaggt 528

             
Query: 197 cc 198
           ||
Sbjct: 529 cc 530



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 308 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 357
           ||||| || |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 640 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 689
to top
>gb|AY142634.1| Arabidopsis thaliana putative uroporphyrinogen decarboxylase
           (At2g40490) mRNA, complete cds
          Length = 1216

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 17  caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 76
           |||| |||||||||||| |||||||  ||| | || |||||||| ||||  || ||||| 
Sbjct: 250 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 309

                                                                       
Query: 77  gttgagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcg 136
           || || || ||| |||||||||||||||| || ||||| ||||| || ||  ||||||| 
Sbjct: 310 gtggaaatttctttgcagccatggaaggtgtttaagccagatggggtgattctgttctca 369

                                                                       
Query: 137 gatatccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggt 196
           || || || |||||| |  |||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 370 gacattctcactccattgtctggaatgaacatacctttcgacattgttaaaggaaaaggt 429

             
Query: 197 cc 198
           ||
Sbjct: 430 cc 431



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 308 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 357
           ||||| || |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 541 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 590
to top
>gb|AY035057.1| Arabidopsis thaliana putative uroporphyrinogen decarboxylase
           (At2g40490) mRNA, complete cds
          Length = 1470

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 17  caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 76
           |||| |||||||||||| |||||||  ||| | || |||||||| ||||  || ||||| 
Sbjct: 336 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 395

                                                                       
Query: 77  gttgagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcg 136
           || || || ||| |||||||||||||||| || ||||| ||||| || ||  ||||||| 
Sbjct: 396 gtggaaatttctttgcagccatggaaggtgtttaagccagatggggtgattctgttctca 455

                                                                       
Query: 137 gatatccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggt 196
           || || || |||||| |  |||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 456 gacattctcactccattgtctggaatgaacatacctttcgacattgttaaaggaaaaggt 515

             
Query: 197 cc 198
           ||
Sbjct: 516 cc 517



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 308 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 357
           ||||| || |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 627 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 676
to top
>emb|BX820790.1|CNS0AA7W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH69ZB05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1369

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 17  caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 76
           |||| |||||||||||| |||||||  ||| | || |||||||| ||||  || ||||| 
Sbjct: 335 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 394

                                                                       
Query: 77  gttgagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcg 136
           || || || ||| |||||||||||||||| || ||||| ||||| || ||  ||||||| 
Sbjct: 395 gtggaaatttctttgcagccatggaaggtgtttaagccagatggggtgattctgttctca 454

                                                                       
Query: 137 gatatccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggt 196
           || || || |||||| |  |||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 455 gacattctcactccattgtctggaatgaacatacctttcgacattgttaaaggaaaaggt 514

             
Query: 197 cc 198
           ||
Sbjct: 515 cc 516



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 308 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 357
           ||||| || |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 626 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 675
to top
>emb|BX820062.1|CNS0AA6S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS6ZC09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1433

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 17  caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 76
           |||| |||||||||||| |||||||  ||| | || |||||||| ||||  || ||||| 
Sbjct: 349 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 408

                                                                       
Query: 77  gttgagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcg 136
           || || || ||| |||||||||||||||| || ||||| ||||| || ||  ||||||| 
Sbjct: 409 gtggaaatttctttgcagccatggaaggtgtttaagccagatggggtgattctgttctca 468

                                                                       
Query: 137 gatatccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggt 196
           || || || |||||| |  |||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 469 gacattctcactccattgtctggaatgaacatacctttcgacattgttaaaggaaaaggt 528

             
Query: 197 cc 198
           ||
Sbjct: 529 cc 530



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 308 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 357
           ||||| || |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 640 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 689
to top
>emb|BX819829.1|CNS0AA6W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS33ZA06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1397

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 17  caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 76
           |||| |||||||||||| |||||||  ||| | || |||||||| ||||  || ||||| 
Sbjct: 319 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 378

                                                                       
Query: 77  gttgagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcg 136
           || || || ||| |||||||||||||||| || ||||| ||||| || ||  ||||||| 
Sbjct: 379 gtggaaatttctttgcagccatggaaggtgtttaagccagatggggtgattctgttctca 438

                                                                       
Query: 137 gatatccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggt 196
           || || || |||||| |  |||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 439 gacattctcactccattgtctggaatgaacatacctttcgacattgttaaaggaaaaggt 498

             
Query: 197 cc 198
           ||
Sbjct: 499 cc 500



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 308 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 357
           ||||| || |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 610 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 659
to top
>emb|BX819769.1|CNS0AA6J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS25ZC09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1428

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 17  caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 76
           |||| |||||||||||| |||||||  ||| | || |||||||| ||||  || ||||| 
Sbjct: 336 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 395

                                                                       
Query: 77  gttgagatctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcg 136
           || || || ||| |||||||||||||||| || ||||| ||||| || ||  ||||||| 
Sbjct: 396 gtggaaatttctttgcagccatggaaggtgtttaagccagatggggtgattctgttctca 455

                                                                       
Query: 137 gatatccttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggt 196
           || || || |||||| |  |||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 456 gacattctcactccattgtctggaatgaacatacctttcgacattgttaaaggaaaaggt 515

             
Query: 197 cc 198
           ||
Sbjct: 516 cc 517



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 308 gaggttaagaatgaagctgctgtgcttggttttgttggagctccctttac 357
           ||||| || |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 627 gaggtgaacaatgaagccgctgttctgggatttgttggagctccatttac 676
to top
>emb|X82833.1|NTUDEC N.tabacum mRNA for uroporphyrinogen decarboxylase
          Length = 1477

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 161/203 (79%)
 Strand = Plus / Plus

                                                                       
Query: 23  ctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgttgttgag 82
           ||||| ||||| || || ||||||||||| |||||||| || ||||| ||||| || || 
Sbjct: 270 ctctgcgagaagtacccattgttccgtgatagatcagagaacgttgatcttgtggtagaa 329

                                                                       
Query: 83  atctctctgcagccatggaaggttttcaagcctgatggagttatcttgttctcggatatc 142
           || ||||| || || ||||| || |||| ||||||||| || || || || || || || 
Sbjct: 330 atttctctacaaccctggaaagtattcaggcctgatggggtcattttattttcagacatt 389

                                                                       
Query: 143 cttactccacttcctgggatgaacataccttttgacattgtgaaaggaaaaggtccagtg 202
           |||||||| ||| | |||||||| || ||||| |||||| | || || || ||||| || 
Sbjct: 390 cttactcctctttcagggatgaatatccctttcgacattataaaggggaagggtcctgtc 449

                                  
Query: 203 atatatgatcccttaagaacagc 225
           |||| ||||||| | ||||||||
Sbjct: 450 atatttgatcccctgagaacagc 472
to top
>dbj|AB050117.1| Amaranthus tricolor UROD mRNA for uroporphyrinogen decarboxylase,
           partial cds
          Length = 573

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 161 atgaacataccttttgacattgtgaaaggaaaaggtcc 198
           |||||||||||||||||||||||||||||||| |||||
Sbjct: 4   atgaacataccttttgacattgtgaaaggaaagggtcc 41



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 307 agaggttaagaatgaagctgctgtgcttggttttgttggagctccctttacc 358
           ||||||| | ||| ||||||| || || ||||||||||| ||||| ||||||
Sbjct: 150 agaggttgacaataaagctgcagttctcggttttgttggggctccttttacc 201
to top
>gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map CIC10A06, complete
             sequence
          Length = 84675

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 156   ctgggatgaacataccttttgacattgtgaaaggaaaaggtcc 198
             |||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 49261 ctggaatgaacatacctttcgacattgttaaaggaaaaggtcc 49219



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                         
Query: 17    caaaatctctgtgagaaatatcctttgttccgtgaaagatcagaaaatgttgaccttgtt 76
             |||| |||||||||||| |||||||  ||| | || |||||||| ||||  || ||||| 
Sbjct: 49495 caaactctctgtgagaagtatccttctttcagagatagatcagagaatgcagatcttgtg 49436

                                                         
Query: 77    gttgagatctctctgcagccatggaaggttttcaagcctgatgg 120
             || || || ||| |||||||||||||||| || ||||| |||||
Sbjct: 49435 gtggaaatttctttgcagccatggaaggtgtttaagccagatgg 49392



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 317   aatgaagctgctgtgcttggttttgttggagctccctttac 357
             |||||||| ||||| || || |||||||||||||| |||||
Sbjct: 48993 aatgaagccgctgttctgggatttgttggagctccatttac 48953
to top
>gb|AC149472.23| Medicago truncatula clone mth2-77f21, complete sequence
          Length = 120151

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 44    ttccgtgaaagatcagaaaatgttgaccttgttgttgagatctctctgcagccatggaag 103
             ||||| |||||||| ||||||||||| || || ||||| || ||  |||| || ||||||
Sbjct: 29999 ttccgggaaagatctgaaaatgttgatctcgtggttgaaatttcattgcaaccgtggaag 29940

                              
Query: 104   gttttcaagcctgatgg 120
             |||||| ||||||||||
Sbjct: 29939 gttttccagcctgatgg 29923
to top
>emb|BX470127.2| Mouse DNA sequence from clone RP24-280A6 on chromosome 4, complete
              sequence
          Length = 142803

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 380    ggaggttcatccaagaatttctcaaa 405
              ||||||||||||||||||||| ||||
Sbjct: 110535 ggaggttcatccaagaatttcacaaa 110560
to top
>emb|AL683826.14| Human DNA sequence from clone XXyac-21CG7 on chromosome 10 Contains
             gene FLJ21665, the gene for stresscopin (SPC) (SCP UCN3
             UCNIII) and the 5' end of a ribosomal protein L26 (RPL26)
             pseudogene, complete sequence
          Length = 103752

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 399   tctcaaagataaagagaatgg 419
             |||||||||||||||||||||
Sbjct: 37238 tctcaaagataaagagaatgg 37218
to top
>gb|AC096759.3| Homo sapiens BAC clone RP11-567N4 from 4, complete sequence
          Length = 196363

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 445   taatttgctacagaagtttac 465
             |||||||||||||||||||||
Sbjct: 68860 taatttgctacagaagtttac 68880
to top
>dbj|BS000079.1| Pan troglodytes chromosome 22 clone:RP43-047O12, map 22, complete
             sequences
          Length = 158933

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   ttttgacattgtgaaaggaaa 192
             |||||||||||||||||||||
Sbjct: 24492 ttttgacattgtgaaaggaaa 24472
to top
>dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, section 28/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 172    ttttgacattgtgaaaggaaa 192
              |||||||||||||||||||||
Sbjct: 205257 ttttgacattgtgaaaggaaa 205237
to top
>dbj|AP000953.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B697O17,
             LL56-APP region, complete sequence
          Length = 96067

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   ttttgacattgtgaaaggaaa 192
             |||||||||||||||||||||
Sbjct: 27122 ttttgacattgtgaaaggaaa 27102
to top
>emb|AL646048.22| Mouse DNA sequence from clone RP23-289C5 on chromosome X, complete
             sequence
          Length = 114787

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   ccacttcctgggatgaacata 169
             |||||||||||||||||||||
Sbjct: 78387 ccacttcctgggatgaacata 78407
to top
>ref|NM_111542.1| Arabidopsis thaliana unknown protein AT3G66652 mRNA, complete cds
          Length = 2943

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 390  ccaagaatttctcaaagataaaga 413
            |||||||| |||||||||||||||
Sbjct: 2181 ccaagaatctctcaaagataaaga 2158
to top
>gb|AF386526.1| Shigella flexneri 2a str. 301 virulence plasmid pCP301, complete sequence
          Length = 221618

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    ttggcatcttattgcgtgga 378
              ||||||||||||||||||||
Sbjct: 121569 ttggcatcttattgcgtgga 121588
to top
>gb|AC150408.2| Branchiostoma floridae clone CH302-56A5, complete sequence
          Length = 180427

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 24   tctgtgagaaatatcctttgttccgtgaaaga 55
            ||||||||||||||||| ||||  ||||||||
Sbjct: 3577 tctgtgagaaatatcctatgttttgtgaaaga 3546
to top
>gb|AY563922.1| Brachystigma wrightii isolate brwr1 maturase K (matK) gene,
           complete cds; chloroplast
          Length = 2730

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  cttgttgttgagatctctct 90
           ||||||||||||||||||||
Sbjct: 781 cttgttgttgagatctctct 762
to top
>gb|AF531781.1| Pedicularis sylvatica trnK gene, intron; and maturase (matK) gene,
           complete cds; chloroplast genes for chloroplast products
          Length = 2450

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  cttgttgttgagatctctct 90
           ||||||||||||||||||||
Sbjct: 761 cttgttgttgagatctctct 742
to top
>ref|XM_710711.1| Candida albicans SC5314 regulator of filamentous growth and virulence
            Rfg1p (CaO19_10341), mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   aatgttgaccttgttgttga 81
            ||||||||||||||||||||
Sbjct: 1732 aatgttgaccttgttgttga 1713
to top
>ref|XM_710662.1| Candida albicans SC5314 regulator of filamentous growth and virulence
            Rfg1p (CaO19_2824), mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   aatgttgaccttgttgttga 81
            ||||||||||||||||||||
Sbjct: 1033 aatgttgaccttgttgttga 1014
to top
>gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, complete sequence
          Length = 165330

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 169    accttttgacattgtgaaaggaaa 192
              ||||||||||||||||||| ||||
Sbjct: 102488 accttttgacattgtgaaatgaaa 102465
to top
>ref|XM_388575.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08399.1)
           partial mRNA
          Length = 1563

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 388 atccaagaatttctcaaaga 407
           ||||||||||||||||||||
Sbjct: 154 atccaagaatttctcaaaga 173
to top
>ref|XM_806416.1| Trypanosoma cruzi strain CL Brener peroxin 14 (Tc00.1047053504069.50)
            partial mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 248  gaattcgttccagaggagtg 267
            ||||||||||||||||||||
Sbjct: 1090 gaattcgttccagaggagtg 1109
to top
>gb|AC126553.4| Mus musculus BAC clone RP23-448L16 from chromosome 18, complete sequence
          Length = 184463

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    gctgcgaggagaggttaaga 317
              ||||||||||||||||||||
Sbjct: 134857 gctgcgaggagaggttaaga 134838
to top
>gb|AC124567.4| Mus musculus BAC clone RP23-145E22 from 6, complete sequence
          Length = 218924

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ctctgtgagaaatatccttt 42
             ||||||||||||||||||||
Sbjct: 73586 ctctgtgagaaatatccttt 73567
to top
>ref|XM_883627.1| Candida albicans SC5314 hypothetical protein (CaJ7.0107) partial
           mRNA
          Length = 789

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  atgttgaccttgttgttgag 82
           ||||||||||||||||||||
Sbjct: 690 atgttgaccttgttgttgag 671
to top
>ref|XM_715226.1| Candida albicans SC5314 hypothetical protein (CaO19.7025) partial
           mRNA
          Length = 789

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  atgttgaccttgttgttgag 82
           ||||||||||||||||||||
Sbjct: 690 atgttgaccttgttgttgag 671
to top
>ref|XM_715227.1| Candida albicans SC5314 hypothetical protein (CaO19.7026) partial
           mRNA
          Length = 417

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  atgttgaccttgttgttgag 82
           ||||||||||||||||||||
Sbjct: 281 atgttgaccttgttgttgag 262
to top
>gb|AC158144.13| Mus musculus chromosome 7, clone RP23-82N3, complete sequence
          Length = 213341

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  gaatttctcaaagataaaga 413
            ||||||||||||||||||||
Sbjct: 4481 gaatttctcaaagataaaga 4462
to top
>emb|AL591398.2| Human DNA sequence from clone RP11-81C12 on chromosome X Contains a
             pseudogene similar to part of mothers against
             decapentaplegic (MAD) homolog (Drosophila) interacting
             protein receptor activation anchor (MADHIP), complete
             sequence
          Length = 89973

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    aaaatctctgtgagaaatat 37
             ||||||||||||||||||||
Sbjct: 76717 aaaatctctgtgagaaatat 76698
to top
>emb|AL590628.6| Human DNA sequence from clone RP11-252O7 on chromosome 10 Contains the
             3' end of the ADD3 gene for adducin 3 (gamma) and a small
             nuclear ribonucleoprotein polypeptide G (SNRPG)
             pseudogene, complete sequence
          Length = 113797

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   gtgaaaggaaaaggtccagt 201
             ||||||||||||||||||||
Sbjct: 22999 gtgaaaggaaaaggtccagt 22980
to top
>emb|AL139084.9| Human DNA sequence from clone RP11-318G11 on chromosome 13 Contains
             part of the gene for zizimin1 (KIAA1085) and a ribosomal
             protein L7 (RPL7) pseudogene, complete sequence
          Length = 80803

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tctgcagccatggaaggttt 107
             ||||||||||||||||||||
Sbjct: 45021 tctgcagccatggaaggttt 45040
to top
>gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 map X, complete sequence
          Length = 203953

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     aaaatctctgtgagaaatat 37
              ||||||||||||||||||||
Sbjct: 131605 aaaatctctgtgagaaatat 131586
to top
>emb|AL391753.1|SFPWR100 Shigella flexneri virulence plasmid pWR100: from 1 to 213494
          Length = 213494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    ttggcatcttattgcgtgga 378
              ||||||||||||||||||||
Sbjct: 116905 ttggcatcttattgcgtgga 116924
to top
>gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, complete sequence
          Length = 172865

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     catgaagtagctaccaaaatctct 26
             |||||||||| |||||||||||||
Sbjct: 75327 catgaagtagttaccaaaatctct 75304
to top
>gb|AC153921.5| Mus musculus 10 BAC RP23-89C21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 212543

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    agaatttctcaaagataaag 412
              ||||||||||||||||||||
Sbjct: 139098 agaatttctcaaagataaag 139117
to top
>gb|AF348706.1|AF348706 Shigella flexneri large virulence plasmid pWR501, complete plasmid
              sequence
          Length = 221851

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    ttggcatcttattgcgtgga 378
              ||||||||||||||||||||
Sbjct: 114594 ttggcatcttattgcgtgga 114613
to top
>gb|AF330198.1|AF330198 Candida albicans regulator of filamentous growth and virulence Rfg1
            (rfg1) gene, complete cds
          Length = 3387

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   aatgttgaccttgttgttga 81
            ||||||||||||||||||||
Sbjct: 1866 aatgttgaccttgttgttga 1847
to top
>gb|AC036106.6|AC036106 Arabidopsis thaliana chromosome 3 BAC T8E24 genomic sequence, complete
             sequence
          Length = 51646

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 390   ccaagaatttctcaaagataaaga 413
             |||||||| |||||||||||||||
Sbjct: 34524 ccaagaatctctcaaagataaaga 34547
to top
>emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chromosome 2, complete
             sequence
          Length = 144566

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    atcagaaaatgttgaccttg 74
             ||||||||||||||||||||
Sbjct: 29462 atcagaaaatgttgaccttg 29481
to top
>gb|AC153603.3| Mus musculus 6 BAC RP23-315I7 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 228174

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   ctctgtgagaaatatccttt 42
            ||||||||||||||||||||
Sbjct: 4678 ctctgtgagaaatatccttt 4659
to top
>gb|AC154823.2| Mus musculus BAC clone RP24-538J1 from 17, complete sequence
          Length = 187746

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   tacataatttgctacagaag 460
             ||||||||||||||||||||
Sbjct: 15323 tacataatttgctacagaag 15342
to top
>gb|AC104921.9| Mus musculus chromosome 7, clone RP23-474B13, complete sequence
          Length = 182487

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   gaatttctcaaagataaaga 413
             ||||||||||||||||||||
Sbjct: 30180 gaatttctcaaagataaaga 30199
to top
>emb|AL163612.5|CNS01RII Human chromosome 14 DNA sequence BAC R-346L24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171345

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    tgttgaccttgttgttgaga 83
             ||||||||||||||||||||
Sbjct: 62360 tgttgaccttgttgttgaga 62379
to top
>dbj|D50601.1|SHFORF Shigella sonnei genes for 26 ORFs, complete cds
          Length = 20323

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  ttggcatcttattgcgtgga 378
            ||||||||||||||||||||
Sbjct: 5808 ttggcatcttattgcgtgga 5827
to top
>gb|U94325.1|FRU94325 Fugu rubripes Tuple1/HirA gene, complete cds
          Length = 9861

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 ggttaagaatgaagctgctg 329
           ||||||||||||||||||||
Sbjct: 549 ggttaagaatgaagctgctg 568
to top
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     atgttgaccttgttgttgag 82
              ||||||||||||||||||||
Sbjct: 188123 atgttgaccttgttgttgag 188142
to top
>emb|AL671920.9| Mouse DNA sequence from clone RP23-445A22 on chromosome X, complete
             sequence
          Length = 166399

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    aaaatctctgtgagaaatat 37
             ||||||||||||||||||||
Sbjct: 82768 aaaatctctgtgagaaatat 82749
to top
>gb|CP000035.1| Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence
          Length = 182726

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    ttggcatcttattgcgtgga 378
              ||||||||||||||||||||
Sbjct: 143662 ttggcatcttattgcgtgga 143681
to top
>gb|CP000039.1| Shigella sonnei Ss046 plasmid pSS_046, complete sequence
          Length = 214396

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   ttggcatcttattgcgtgga 378
             ||||||||||||||||||||
Sbjct: 94790 ttggcatcttattgcgtgga 94809


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,915,226
Number of Sequences: 3902068
Number of extensions: 4915226
Number of successful extensions: 97460
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97239
Number of HSP's gapped (non-prelim): 218
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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