>FBRL2_ARATH (Q94AH9) Fibrillarin-2 (Fibrillarin-like protein)|
          Length = 320

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAAA+LGGVDNIWI PG +VL LG
Sbjct: 133 NPFRSKLAAAILGGVDNIWIKPGAKVLYLG 162

>FBRL1_ARATH (Q9FEF8) Fibrillarin-1 (SKP1-interacting partner 7)|
          Length = 308

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAAA+LGGVDNIWI PG +VL LG
Sbjct: 122 NPFRSKLAAAILGGVDNIWIKPGAKVLYLG 151

>FBRL_SCHPO (P35551) Fibrillarin|
          Length = 305

 Score = 51.2 bits (121), Expect = 8e-07
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAA +LGG+DNI+I PG RVL LG
Sbjct: 126 NPFRSKLAAGILGGLDNIYIKPGARVLYLG 155

>FBRL_RAT (P22509) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAAA+LGGVD I I PG +VL LG
Sbjct: 144 NPFRSKLAAAILGGVDQIHIKPGAKVLYLG 173

>FBRL_MOUSE (P35550) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAAA+LGGVD I I PG +VL LG
Sbjct: 144 NPFRSKLAAAILGGVDQIHIKPGAKVLYLG 173

>FBRL_HUMAN (P22087) Fibrillarin (34 kDa nucleolar scleroderma antigen)|
          Length = 321

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAAA+LGGVD I I PG +VL LG
Sbjct: 138 NPFRSKLAAAILGGVDQIHIKPGAKVLYLG 167

>FBRL_XENLA (P22232) Fibrillarin|
          Length = 323

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSK+AAA+LGGVD I I PG +VL LG
Sbjct: 140 NPFRSKIAAAILGGVDQIHIKPGVKVLYLG 169

>FBRL_CANGA (Q6FN88) Fibrillarin|
          Length = 323

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAA ++GG+D ++IAPG +VL LG
Sbjct: 141 NPFRSKLAAGIMGGLDELFIAPGKKVLYLG 170

>FBRL_ASHGO (Q756P0) Fibrillarin|
          Length = 326

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAA ++GG+D ++IAPG +VL LG
Sbjct: 146 NPFRSKLAAGIMGGLDELFIAPGKKVLYLG 175

>FBRL_YEAST (P15646) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAA ++GG+D ++IAPG +VL LG
Sbjct: 145 NPFRSKLAAGIMGGLDELFIAPGKKVLYLG 174

>FBRL_DROER (Q8I1F4) Fibrillarin|
          Length = 345

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAAAVLGGV+ I + PG++VL LG
Sbjct: 164 NPFRSKLAAAVLGGVEQIHMPPGSKVLYLG 193

>FBRL_DEBHA (Q6BQ34) Fibrillarin|
          Length = 329

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAA ++GG+D + IAPG +VL LG
Sbjct: 147 NPFRSKLAAGIMGGIDELGIAPGKKVLYLG 176

>FBRL_DROME (Q9W1V3) Fibrillarin|
          Length = 344

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAAAVLGGV+ I + PG++VL LG
Sbjct: 163 NPFRSKLAAAVLGGVEQIHMPPGSKVLYLG 192

>FBRL3_ARATH (Q9FHB3) Putative fibrillarin-3|
          Length = 292

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP RSKLA A+  GVDNIWI PG +VL LG
Sbjct: 112 NPHRSKLADAITTGVDNIWIKPGVKVLYLG 141

>FBRL_NEUCR (Q9HE26) Fibrillarin|
          Length = 323

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAA +LGG++ I++ PG++VL LG
Sbjct: 140 NPFRSKLAAGILGGLETIYMKPGSKVLYLG 169

>FBRL_CAEEL (Q22053) Fibrillarin|
          Length = 352

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKLAA+++GG++N  I PGT++L LG
Sbjct: 169 NPFRSKLAASIMGGLENTHIKPGTKLLYLG 198

>FBRL_TETTH (Q27200) Fibrillarin|
          Length = 294

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP+RSK+AAAV+GG+ +I I PG++VL LG
Sbjct: 117 NPYRSKIAAAVVGGISDIHIKPGSKVLYLG 146

>FBRL_LEIMA (P35549) Fibrillarin|
          Length = 297

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/30 (56%), Positives = 24/30 (80%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP+RSKLA+A+  GV +I + PG++VL LG
Sbjct: 115 NPYRSKLASAIYAGVSSIHMGPGSKVLYLG 144

>FLPA_PYRKO (Q5JFN1) Fibrillarin-like pre-rRNA-processing protein|
          Length = 226

 Score = 37.4 bits (85), Expect = 0.012
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP RSKL AA+L G+ N  I PG+ VL LG
Sbjct: 51  NPTRSKLGAAILNGLKNFPIKPGSTVLYLG 80

>FBRL_ENCCU (Q8SR42) Fibrillarin|
          Length = 291

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           N +RSKLAA ++ G +NI + PG++VL LG
Sbjct: 100 NAYRSKLAAGIVCGAENIHMEPGSKVLYLG 129

>FLPA_PYRAE (Q8ZTI9) Fibrillarin-like pre-rRNA-processing protein|
          Length = 235

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP+RSKLAAA+L G+  + I  GT +L LG
Sbjct: 57  NPYRSKLAAAILNGLKLVPIKEGTHILYLG 86

>FLPA_PYRAB (Q9V2L5) Fibrillarin-like pre-rRNA-processing protein|
          Length = 227

 Score = 36.2 bits (82), Expect = 0.027
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP RSKL AA++ G+ N  I PG  VL LG
Sbjct: 52  NPHRSKLGAAIMNGLKNFPIKPGKSVLYLG 81

>FLPA_PYRFU (Q8U4M2) Fibrillarin-like pre-rRNA-processing protein|
          Length = 227

 Score = 35.8 bits (81), Expect = 0.035
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP RSKL AA++ G+ N  I PG  VL LG
Sbjct: 52  NPHRSKLGAAIVNGLKNFPIKPGKSVLYLG 81

>FLPA_PYRHO (O57811) Fibrillarin-like pre-rRNA-processing protein|
          Length = 227

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP RSKL AA++ G+ N  I PG  VL LG
Sbjct: 52  NPNRSKLGAAIMNGLKNFPIKPGKSVLYLG 81

>FBRL_GIALA (Q24957) Fibrillarin|
          Length = 327

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NPFRSKL AAV   V ++ I PG +VL LG
Sbjct: 147 NPFRSKLGAAVRLNVLDMPIKPGAKVLYLG 176

>FLPA_SULSO (P58032) Fibrillarin-like pre-rRNA-processing protein|
          Length = 232

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           N FRSKLA A+L G+    I  GT+VL LG
Sbjct: 55  NAFRSKLAGAILKGLKTNPIRKGTKVLYLG 84

>FLPA_METVA (P35552) Fibrillarin-like pre-rRNA-processing protein|
          Length = 230

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           NP +SKL AA++ G+  + I  GT+VL LG
Sbjct: 53  NPNKSKLGAAIINGLKKMPIKKGTKVLYLG 82

>FLPA_METWO (Q9HH35) Fibrillarin-like pre-rRNA-processing protein|
          Length = 222

 Score = 32.3 bits (72), Expect = 0.39
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           +P RSK+AAAVL G+    + P +RVL LG
Sbjct: 46  DPRRSKMAAAVLNGLRGFQLNPESRVLYLG 75

>FLPA_SULTO (Q971W2) Fibrillarin-like pre-rRNA-processing protein|
          Length = 233

 Score = 31.6 bits (70), Expect = 0.66
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           N FRSKL  A+L G+    I  GT+VL LG
Sbjct: 55  NAFRSKLGGAILKGLKQNPIVKGTKVLYLG 84

>FLPA_AERPE (Q9Y9U3) Fibrillarin-like pre-rRNA-processing protein|
          Length = 233

 Score = 31.6 bits (70), Expect = 0.66
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           N +RSKLAAA+L G+  + +  G R+L LG
Sbjct: 56  NAYRSKLAAALLKGLIELPVKEGDRILYLG 85

>FLPA_THEAC (Q9HJL8) Fibrillarin-like pre-rRNA-processing protein|
          Length = 230

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 6   PFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           P RSKLAAA+L G+ N+ I   + +L LG
Sbjct: 56  PDRSKLAAAILKGLHNMPIGESSSILYLG 84

>FLPA_METTH (O27283) Fibrillarin-like pre-rRNA-processing protein|
          Length = 224

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           +P RSKLAAA+L G+    +   +RVL LG
Sbjct: 48  DPRRSKLAAAILNGLRGFSLNSDSRVLYLG 77

>FLPA_SULAC (Q9P9M0) Fibrillarin-like pre-rRNA-processing protein|
          Length = 231

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   NPFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           N FRSKLA A++ G+    I  G+++L LG
Sbjct: 55  NAFRSKLAGAIVKGLKYNPIVKGSKILYLG 84

>FLPA_NANEQ (Q74N89) Fibrillarin-like pre-rRNA-processing protein|
          Length = 232

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 6   PFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           PFRSKLA+A+  G+       GT VL LG
Sbjct: 54  PFRSKLASAIKKGLKTWPFKKGTIVLYLG 82

>FLPA_METKA (Q8TXU9) Fibrillarin-like pre-rRNA-processing protein|
          Length = 232

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 6   PFRSKLAAAVLGGVDNIWIAPGTRVLXLG 92
           P RSKLAA ++ G++      G++VL LG
Sbjct: 56  PRRSKLAAMIMNGMEYFPFEEGSKVLYLG 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,808,436
Number of Sequences: 219361
Number of extensions: 140931
Number of successful extensions: 623
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 80,573,946
effective HSP length: 6
effective length of database: 79,257,780
effective search space used: 1902186720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)