| Clone Name | bags6f17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete cds Length = 1433 Score = 468 bits (236), Expect = e-129 Identities = 274/293 (93%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 351 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 411 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 471 Query: 181 cttggacttgcaaagagagntgnagctagaatattgnngacttnnacctntgaagtttat 240 ||||||||||||||||||| || ||||||||||||| ||||| |||| |||||||||| Sbjct: 472 cttggacttgcaaagagagttggagctagaatattgttgacttcgacctctgaagtttat 531 Query: 241 ggtgatnctntngagcatnctnanacngangcctactgnnncantgttaaccc 293 |||||| || | |||||| || | || || |||||||| || ||||||||| Sbjct: 532 ggtgatcctcttgagcatcctcagacggaggcctactggggcaatgttaaccc 584
>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene) Length = 1562 Score = 349 bits (176), Expect = 3e-93 Identities = 259/293 (88%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 458 gacaacttgaagaagtggatcggccacccaagatttgagctcatccgtcatgatgtcacc 517 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 518 caaccgctgcttgtggaggttgaccaaatctatcaccttgcttgccctgcgtcaccaatc 577 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 |||||||||||||||||||| |||||||||||||| ||||| || |||||| |||||||| Sbjct: 578 ttctacaagcacaaccctgttaagaccatcaagacaaatgttatcgggaccctgaacatg 637 Query: 181 cttggacttgcaaagagagntgnagctagaatattgnngacttnnacctntgaagtttat 240 || |||||||||||||||| || ||||||||| || ||||| |||| |||||||||| Sbjct: 638 ctcggacttgcaaagagagttggagctagaattttattgacttcaacctctgaagtttat 697 Query: 241 ggtgatnctntngagcatnctnanacngangcctactgnnncantgttaaccc 293 |||||| | | |||||| || | || || |||||||| || ||||||||| Sbjct: 698 ggtgatccgcttgagcatcctcaaacagaggcctactggggcaatgttaaccc 750
>gb|AY104952.1| Zea mays PCO092342 mRNA sequence Length = 1825 Score = 325 bits (164), Expect = 4e-86 Identities = 256/293 (87%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 702 gacaacctgaagaagtggattggccacccaagatttgagctcatccgtcatgatgtcacc 761 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || ||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 762 gagccacttcttgtggaagttgaccaaatctatcaccttgcttgccctgcttcaccaatc 821 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 |||||||||||||| ||||| |||||||||||||| ||||| ||||| ||| |||||||| Sbjct: 822 ttctacaagcacaatcctgttaagaccatcaagacaaatgttattggtaccctgaacatg 881 Query: 181 cttggacttgcaaagagagntgnagctagaatattgnngacttnnacctntgaagtttat 240 || |||||||||||||||| || |||||| || ||| ||| | |||| |||||||||| Sbjct: 882 ctgggacttgcaaagagagttggagctaggattttgttgacatcaacctctgaagtttat 941 Query: 241 ggtgatnctntngagcatnctnanacngangcctactgnnncantgttaaccc 293 |||||| | | |||||| || | || || |||||||| || ||||||||| Sbjct: 942 ggtgatccacttgagcatcctcaaactgaggcctactggggcaatgttaaccc 994
>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence Length = 958 Score = 303 bits (153), Expect = 2e-79 Identities = 242/278 (87%) Strand = Plus / Plus Query: 16 tggatcggccacccaagatttgagctcatccgtcacgatgtcaccgaaccactgctcgtg 75 ||||| ||||||||||||||||||||||||||||| ||||||||||| || || || ||| Sbjct: 1 tggattggccacccaagatttgagctcatccgtcatgatgtcaccgagccgcttcttgtg 60 Query: 76 gaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttctacaagcacaac 135 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 61 gaagttgaccaaatctatcaccttgcttgccctgcttcaccaatcttctacaagcacaac 120 Query: 136 cctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgcaaag 195 ||||| |||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||| Sbjct: 121 cctgttaagaccatcaagacaaatgttattggtaccctgaacatgcttggacttgcaaag 180 Query: 196 agagntgnagctagaatattgnngacttnnacctntgaagtttatggtgatnctntngag 255 |||| || |||||| || ||| ||| | |||| |||||||||||||||| | | ||| Sbjct: 181 agagttggagctaggattttgttgacatcaacctctgaagtttatggtgatccacttgag 240 Query: 256 catnctnanacngangcctactgnnncantgttaaccc 293 ||| || | || || |||||||| || ||||||||| Sbjct: 241 catcctcaaactgaggcctactggggcaatgttaaccc 278
>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1053 Score = 303 bits (153), Expect = 2e-79 Identities = 221/246 (89%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 220 gacaacctgaagaagtggatcggacacccaagatttgagctaatccgtcatgatgtcacc 279 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 | || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 280 cagcccctgcttgtggaggttgaccaaatctatcaccttgcttgccctgcttcaccaatc 339 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||||||||||||||||||||||||||||| || || || || ||| |||||||| Sbjct: 340 ttctacaagcacaaccctgtcaagaccatcaagacaaacgttatcggaaccctgaacatg 399 Query: 181 cttggacttgcaaagagagntgnagctagaatattgnngacttnnacctntgaagtttat 240 ||||||||||| ||||||| || |||||| || ||| ||||| |||| ||||||||| Sbjct: 400 cttggacttgccaagagagttggagctaggattttgttgacttcgacctctgaagtttac 459 Query: 241 ggtgat 246 |||||| Sbjct: 460 ggtgat 465
>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full insert sequence Length = 1811 Score = 303 bits (153), Expect = 2e-79 Identities = 221/246 (89%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 708 gacaacctgaagaagtggatcggacacccaagatttgagctaatccgtcatgatgtcacc 767 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 | || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 768 cagcccctgcttgtggaggttgaccaaatctatcaccttgcttgccctgcttcaccaatc 827 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||||||||||||||||||||||||||||| || || || || ||| |||||||| Sbjct: 828 ttctacaagcacaaccctgtcaagaccatcaagacaaacgttatcggaaccctgaacatg 887 Query: 181 cttggacttgcaaagagagntgnagctagaatattgnngacttnnacctntgaagtttat 240 ||||||||||| ||||||| || |||||| || ||| ||||| |||| ||||||||| Sbjct: 888 cttggacttgccaagagagttggagctaggattttgttgacttcgacctctgaagtttac 947 Query: 241 ggtgat 246 |||||| Sbjct: 948 ggtgat 953
>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full insert sequence Length = 1411 Score = 303 bits (153), Expect = 2e-79 Identities = 221/246 (89%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 319 gacaacctgaagaagtggatcggacacccaagatttgagctaatccgtcatgatgtcacc 378 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 | || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 379 cagcccctgcttgtggaggttgaccaaatctatcaccttgcttgccctgcttcaccaatc 438 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||||||||||||||||||||||||||||| || || || || ||| |||||||| Sbjct: 439 ttctacaagcacaaccctgtcaagaccatcaagacaaacgttatcggaaccctgaacatg 498 Query: 181 cttggacttgcaaagagagntgnagctagaatattgnngacttnnacctntgaagtttat 240 ||||||||||| ||||||| || |||||| || ||| ||||| |||| ||||||||| Sbjct: 499 cttggacttgccaagagagttggagctaggattttgttgacttcgacctctgaagtttac 558 Query: 241 ggtgat 246 |||||| Sbjct: 559 ggtgat 564
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 145 bits (73), Expect = 9e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 52 gatgtcaccgaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcc 111 ||||||||| | || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9410749 gatgtcacccagcccctgcttgtggaggttgaccaaatctatcaccttgcttgccctgct 9410808 Query: 112 tcaccaatcttctacaagcacaaccctgtcaag 144 ||||||||||||||||||||||||||||||||| Sbjct: 9410809 tcaccaatcttctacaagcacaaccctgtcaag 9410841 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtca 50 ||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 9410145 gacaacctgaagaagtggatcggacacccaagatttgagctaatccgtca 9410194 Score = 65.9 bits (33), Expect = 7e-08 Identities = 58/67 (86%) Strand = Plus / Plus Query: 143 agaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgcaaagagagntg 202 ||||||||||||| || || || || ||| ||||||||||||||||||| ||||||| || Sbjct: 9410945 agaccatcaagacaaacgttatcggaaccctgaacatgcttggacttgccaagagagttg 9411004 Query: 203 nagctag 209 |||||| Sbjct: 9411005 gagctag 9411011 Score = 48.1 bits (24), Expect = 0.016 Identities = 42/48 (87%) Strand = Plus / Minus Query: 150 caagacgaatgtcattgggaccttgaacatgcttggacttgcaaagag 197 |||||| ||||| || ||||||||||||||||| ||| | |||||||| Sbjct: 9574636 caagacaaatgtgatggggaccttgaacatgctgggattggcaaagag 9574589
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 145 bits (73), Expect = 9e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 52 gatgtcaccgaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcc 111 ||||||||| | || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 108149 gatgtcacccagcccctgcttgtggaggttgaccaaatctatcaccttgcttgccctgct 108208 Query: 112 tcaccaatcttctacaagcacaaccctgtcaag 144 ||||||||||||||||||||||||||||||||| Sbjct: 108209 tcaccaatcttctacaagcacaaccctgtcaag 108241 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtca 50 ||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 107545 gacaacctgaagaagtggatcggacacccaagatttgagctaatccgtca 107594 Score = 65.9 bits (33), Expect = 7e-08 Identities = 58/67 (86%) Strand = Plus / Plus Query: 143 agaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgcaaagagagntg 202 ||||||||||||| || || || || ||| ||||||||||||||||||| ||||||| || Sbjct: 108345 agaccatcaagacaaacgttatcggaaccctgaacatgcttggacttgccaagagagttg 108404 Query: 203 nagctag 209 |||||| Sbjct: 108405 gagctag 108411
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 145 bits (73), Expect = 9e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 52 gatgtcaccgaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcc 111 ||||||||| | || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9408870 gatgtcacccagcccctgcttgtggaggttgaccaaatctatcaccttgcttgccctgct 9408929 Query: 112 tcaccaatcttctacaagcacaaccctgtcaag 144 ||||||||||||||||||||||||||||||||| Sbjct: 9408930 tcaccaatcttctacaagcacaaccctgtcaag 9408962 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtca 50 ||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 9408266 gacaacctgaagaagtggatcggacacccaagatttgagctaatccgtca 9408315 Score = 65.9 bits (33), Expect = 7e-08 Identities = 58/67 (86%) Strand = Plus / Plus Query: 143 agaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgcaaagagagntg 202 ||||||||||||| || || || || ||| ||||||||||||||||||| ||||||| || Sbjct: 9409066 agaccatcaagacaaacgttatcggaaccctgaacatgcttggacttgccaagagagttg 9409125 Query: 203 nagctag 209 |||||| Sbjct: 9409126 gagctag 9409132 Score = 48.1 bits (24), Expect = 0.016 Identities = 42/48 (87%) Strand = Plus / Minus Query: 150 caagacgaatgtcattgggaccttgaacatgcttggacttgcaaagag 197 |||||| ||||| || ||||||||||||||||| ||| | |||||||| Sbjct: 9572757 caagacaaatgtgatggggaccttgaacatgctgggattggcaaagag 9572710
>gb|U82433.1|PAU82433 Prunus armeniaca thymidine diphospho-glucose 4-6-dehydratase homolog mRNA, partial cds Length = 1012 Score = 125 bits (63), Expect = 8e-26 Identities = 148/177 (83%) Strand = Plus / Plus Query: 30 aagatttgagctcatccgtcacgatgtcaccgaaccactgctcgtggaggttgaccaaat 89 ||||||||| || || ||||| |||||||| || || ||||| | |||||||||||||| Sbjct: 1 aagatttgaacttattcgtcatgatgtcacagagcctctgctaattgaggttgaccaaat 60 Query: 90 ctatcaccttgcttgccctgcctcaccaatcttctacaagcacaaccctgtcaagaccat 149 || || ||||| |||||||| || ||||||||||||||| |||| ||||| ||||| || Sbjct: 61 ataccatcttgcctgccctgcttctccaatcttctacaagtacaatcctgtaaagacaat 120 Query: 150 caagacgaatgtcattgggaccttgaacatgcttggacttgcaaagagagntgnagc 206 ||||| ||||||||||| || ||||||||||| |||||||| ||| ||| || ||| Sbjct: 121 aaagacaaatgtcattggtacattgaacatgctgggacttgccaagcgagttggagc 177
>ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript variant AT3G46440.1 mRNA, complete cds Length = 1374 Score = 123 bits (62), Expect = 3e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||| ||||||||||| || || |||||||||||||| ||||||||||||||||| Sbjct: 327 gacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacgatgtcacg 386 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || ||||| | | |||||||| || || || || ||||| || ||||| || || ||| Sbjct: 387 gagccacttttgatcgaggttgatcagatttaccatcttgcatgtcctgcttctcctatc 446 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||| |||||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 447 ttctacaagtacaaccctgtgaagacaatcaagaccaatgtgattggcacactgaacatg 506 Query: 181 ct 182 || Sbjct: 507 ct 508
>ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript variant AT3G46440.2 mRNA, complete cds Length = 1464 Score = 123 bits (62), Expect = 3e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||| ||||||||||| || || |||||||||||||| ||||||||||||||||| Sbjct: 417 gacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacgatgtcacg 476 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || ||||| | | |||||||| || || || || ||||| || ||||| || || ||| Sbjct: 477 gagccacttttgatcgaggttgatcagatttaccatcttgcatgtcctgcttctcctatc 536 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||| |||||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 537 ttctacaagtacaaccctgtgaagacaatcaagaccaatgtgattggcacactgaacatg 596 Query: 181 ct 182 || Sbjct: 597 ct 598
>gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratases (At3g46440) mRNA, complete cds Length = 1057 Score = 123 bits (62), Expect = 3e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||| ||||||||||| || || |||||||||||||| ||||||||||||||||| Sbjct: 202 gacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacgatgtcacg 261 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || ||||| | | |||||||| || || || || ||||| || ||||| || || ||| Sbjct: 262 gagccacttttgatcgaggttgatcagatttaccatcttgcatgtcctgcttctcctatc 321 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||| |||||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 322 ttctacaagtacaaccctgtgaagacaatcaagaccaatgtgattggcacactgaacatg 381 Query: 181 ct 182 || Sbjct: 382 ct 383
>gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratase (At3g46440) mRNA, complete cds Length = 1356 Score = 123 bits (62), Expect = 3e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||| ||||||||||| || || |||||||||||||| ||||||||||||||||| Sbjct: 327 gacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacgatgtcacg 386 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || ||||| | | |||||||| || || || || ||||| || ||||| || || ||| Sbjct: 387 gagccacttttgatcgaggttgatcagatttaccatcttgcatgtcctgcttctcctatc 446 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||| |||||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 447 ttctacaagtacaaccctgtgaagacaatcaagaccaatgtgattggcacactgaacatg 506 Query: 181 ct 182 || Sbjct: 507 ct 508
>emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZD03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1211 Score = 121 bits (61), Expect = 1e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||| ||||||||||| || || |||||||||||||| ||||||||||||||||| Sbjct: 226 gacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacgatgtcacg 285 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || ||||| | | |||||||| || || || || ||||| || ||||| || || ||| Sbjct: 286 gagccacttttgatcgaggttgatcagatttaccatcttgcatgtcctgcttctcctatc 345 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||| |||||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 346 ttctacaagtacaaccctgtgaagacaatcaagaccaatgtgattggcacactgaacatg 405 Query: 181 c 181 | Sbjct: 406 c 406
>gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete sequence Length = 1281 Score = 117 bits (59), Expect = 2e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||| || ||||||||||| || || || ||||||||||| |||||||| |||||||| Sbjct: 263 gacaatctcaagaagtggattggtcatccgagatttgagcttatccgtcatgatgtcaca 322 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || ||||| || | |||||||| || || || || ||||| || ||||| || || ||| Sbjct: 323 gagccacttctgatcgaggttgatcagatttaccatcttgcatgtcctgcttctcctatc 382 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||| |||||||||| ||||| |||||||| ||||||||||| || |||||||| Sbjct: 383 ttctacaagtacaaccctgtgaagacaatcaagaccaatgtcattggcacactgaacatg 442 Query: 181 cttggacttgc 191 || || ||||| Sbjct: 443 ctaggtcttgc 453
>emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1114 Score = 115 bits (58), Expect = 8e-23 Identities = 151/182 (82%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||| ||||||||||| || || |||||||||||||| ||||||||||||||||| Sbjct: 151 gacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacgatgtcacg 210 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || ||||| | | |||||||| || || || || ||||| || ||||| || || ||| Sbjct: 211 gagccacttttgatcgaggttgatcagatttaccatcttgcatgtcctgcttctcctatc 270 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 ||||||||| |||||| ||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 271 ttctacaagtacaaccgtgtgaagacaatcaagaccaatgtgattggcacactgaacatg 330 Query: 181 ct 182 || Sbjct: 331 ct 332
>ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE); catalytic AT5G59290 (UXS3) mRNA, complete cds Length = 1459 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 4 aacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcaccgaa 63 ||||| |||||||||||||| ||||| || ||||| || || ||||||||||| ||||| Sbjct: 354 aacctcaagaagtggatcggtcaccccaggtttgaacttattcgtcacgatgttaccgag 413 Query: 64 ccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttc 123 || || | | |||||||| | || || || |||||||| |||||||| || |||||| Sbjct: 414 cctttgttgatcgaggttgatcggatttaccatcttgcttgtcctgcctctcctatcttc 473 Query: 124 tacaagcacaaccctgtcaagaccatcaagacgaatgtcattgg 167 ||||| |||||||||| ||||| |||||||| ||||| ||||| Sbjct: 474 tacaaatacaaccctgttaagacaatcaagaccaatgtgattgg 517
>gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds Length = 1029 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 4 aacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcaccgaa 63 ||||| |||||||||||||| ||||| || ||||| || || ||||||||||| ||||| Sbjct: 208 aacctcaagaagtggatcggtcaccccaggtttgaacttattcgtcacgatgttaccgag 267 Query: 64 ccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttc 123 || || | | |||||||| | || || || |||||||| |||||||| || |||||| Sbjct: 268 cctttgttgatcgaggttgatcggatttaccatcttgcttgtcctgcctctcctatcttc 327 Query: 124 tacaagcacaaccctgtcaagaccatcaagacgaatgtcattgg 167 ||||| |||||||||| ||||| |||||||| ||||| ||||| Sbjct: 328 tacaaatacaaccctgttaagacaatcaagaccaatgtgattgg 371
>gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds Length = 1364 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 4 aacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcaccgaa 63 ||||| |||||||||||||| ||||| || ||||| || || ||||||||||| ||||| Sbjct: 298 aacctcaagaagtggatcggtcaccccaggtttgaacttattcgtcacgatgttaccgag 357 Query: 64 ccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttc 123 || || | | |||||||| | || || || |||||||| |||||||| || |||||| Sbjct: 358 cctttgttgatcgaggttgatcggatttaccatcttgcttgtcctgcctctcctatcttc 417 Query: 124 tacaagcacaaccctgtcaagaccatcaagacgaatgtcattgg 167 ||||| |||||||||| ||||| |||||||| ||||| ||||| Sbjct: 418 tacaaatacaaccctgttaagacaatcaagaccaatgtgattgg 461
>emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1303 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 4 aacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcaccgaa 63 ||||| |||||||||||||| ||||| || ||||| || || ||||||||||| ||||| Sbjct: 280 aacctcaagaagtggatcggtcaccccaggtttgaacttattcgtcacgatgttaccgag 339 Query: 64 ccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttc 123 || || | | |||||||| | || || || |||||||| |||||||| || |||||| Sbjct: 340 cctttgttgatcgaggttgatcggatttaccatcttgcttgtcctgcctctcctatcttc 399 Query: 124 tacaagcacaaccctgtcaagaccatcaagacgaatgtcattgg 167 ||||| |||||||||| ||||| |||||||| ||||| ||||| Sbjct: 400 tacaaatacaaccctgttaagacaatcaagaccaatgtgattgg 443
>gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, complete sequence Length = 1418 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 4 aacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcaccgaa 63 ||||| |||||||||||||| ||||| || ||||| || || ||||||||||| ||||| Sbjct: 354 aacctcaagaagtggatcggtcaccccaggtttgaacttattcgtcacgatgttaccgag 413 Query: 64 ccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttc 123 || || | | |||||||| | || || || |||||||| |||||||| || |||||| Sbjct: 414 cctttgttgatcgaggttgatcggatttaccatcttgcttgtcctgcctctcctatcttc 473 Query: 124 tacaagcacaaccctgtcaagaccatcaagacgaatgtcattgg 167 ||||| |||||||||| ||||| |||||||| ||||| ||||| Sbjct: 474 tacaaatacaaccctgttaagacaatcaagaccaatgtgattgg 517
>gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS3) mRNA, complete cds Length = 1029 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 4 aacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcaccgaa 63 ||||| |||||||||||||| ||||| || ||||| || || ||||||||||| ||||| Sbjct: 208 aacctcaagaagtggatcggtcaccccaggtttgaacttattcgtcacgatgttaccgag 267 Query: 64 ccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttc 123 || || | | |||||||| | || || || |||||||| |||||||| || |||||| Sbjct: 268 cctttgttgatcgaggttgatcggatttaccatcttgcttgtcctgcctctcctatcttc 327 Query: 124 tacaagcacaaccctgtcaagaccatcaagacgaatgtcattgg 167 ||||| |||||||||| ||||| |||||||| ||||| ||||| Sbjct: 328 tacaaatacaaccctgttaagacaatcaagaccaatgtgattgg 371
>gb|AY619952.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 3 mRNA, complete cds Length = 1756 Score = 77.8 bits (39), Expect = 2e-11 Identities = 105/127 (82%) Strand = Plus / Plus Query: 73 gtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttctacaagcac 132 |||||||||||||| ||||| ||||| |||||||||||||| || | ||| ||||| Sbjct: 705 gtggaggttgaccagatctaccacctcgcttgccctgcctctcctgttcactataagcat 764 Query: 133 aaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgca 192 ||||| ||||||||||| ||||| ||||| | ||||| |||||||||||||| | || Sbjct: 765 aaccccgtcaagaccattaagacaaatgttgtggggacactgaacatgcttggattggcg 824 Query: 193 aagagag 199 ||||||| Sbjct: 825 aagagag 831
>emb|AJ275318.1|CAR275318 Cicer arietinum mRNA for dTDP-glucose 4-6-dehydratase Length = 1356 Score = 75.8 bits (38), Expect = 7e-11 Identities = 155/194 (79%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||| || || ||||| || || |||||||||||||| |||||||| |||||||| Sbjct: 272 gacaacctcaaaaaatggattggtcatccaagatttgagcttatccgtcatgatgtcact 331 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || || ||| | | |||||||| || ||||| || || || ||||| || || || || Sbjct: 332 gagcctctgatgattgaggttgatcagatctaccatctggcatgccccgcatctcctatt 391 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 || ||||| | || ||||| ||||| || ||||| ||||| ||||| || |||||||| Sbjct: 392 ttttacaaatataatcctgtaaagacaataaagactaatgttattggcactctgaacatg 451 Query: 181 cttggacttgcaaa 194 |||||||||||||| Sbjct: 452 cttggacttgcaaa 465
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 69.9 bits (35), Expect = 4e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 76 gaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttctacaagcacaac 135 |||||||| || || || || ||||| || ||||| || || |||||||||||| ||||| Sbjct: 76744 gaggttgatcagatttaccatcttgcatgtcctgcttctcctatcttctacaagtacaac 76685 Query: 136 cctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgct 182 ||||| ||||| |||||||| ||||| ||||| || |||||||||| Sbjct: 76684 cctgtgaagacaatcaagaccaatgtgattggcacactgaacatgct 76638 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacg 52 |||||||| ||||||||||| || || |||||||||||||| |||||||||| Sbjct: 76917 gacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacg 76866
>dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-1 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1303 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 140 tcaagaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgcaaagag 197 |||||||||||||||| ||||| || ||||||||||||||||| ||| | |||||||| Sbjct: 561 tcaagaccatcaagacaaatgtgatggggaccttgaacatgctgggattggcaaagag 618
>dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I12, full insert sequence Length = 1604 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 140 tcaagaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgcaaagag 197 |||||||||||||||| ||||| || ||||||||||||||||| ||| | |||||||| Sbjct: 656 tcaagaccatcaagacaaatgtgatggggaccttgaacatgctgggattggcaaagag 713
>gb|BT017677.1| Zea mays clone EL01N0443A11.c mRNA sequence Length = 1211 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 123 ctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgct 182 ||||||| ||||||| |||||||||||||||| ||||| ||||||| |||||||||| Sbjct: 252 ctacaagtacaaccccatcaagaccatcaagacaaatgttgttgggacactgaacatgct 311 Query: 183 tgga 186 |||| Sbjct: 312 tgga 315
>gb|AY619951.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 2 mRNA, complete cds Length = 1519 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 76 gaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttctacaagcacaac 135 |||||||| || || ||||| ||||| ||||| || || ||||| ||||||||| |||| Sbjct: 492 gaggttgatcagatttatcatcttgcatgcccggcttctccaatattctacaagtacaat 551 Query: 136 cctgtcaagaccatcaagacgaatgtcattgg 167 ||||| ||||| || ||||| ||||||||||| Sbjct: 552 cctgttaagacaataaagactaatgtcattgg 583
>gb|AY963839.1| Cucumis sativus putative nucleotide sugar epimerase mRNA, partial cds Length = 416 Score = 60.0 bits (30), Expect = 4e-06 Identities = 85/104 (81%) Strand = Plus / Plus Query: 103 tgccctgcctcaccaatcttctacaagcacaaccctgtcaagaccatcaagacgaatgtc 162 ||||| ||||| || ||||||||||| |||| ||||| ||||| | ||||| |||||| Sbjct: 23 tgccccgcctcgccgatcttctacaaatacaatcctgttaagacaacaaagacaaatgtc 82 Query: 163 attgggaccttgaacatgcttggacttgcaaagagagntgnagc 206 ||||| || ||||| ||| | |||||||| ||||||| || ||| Sbjct: 83 attggcacattgaatatgttgggacttgccaagagagttggagc 126
>dbj|AB059568.1| Pisum sativum uxs1 mRNA for UDP-D-glucuronate carboxy-lyase, complete cds Length = 1406 Score = 60.0 bits (30), Expect = 4e-06 Identities = 153/194 (78%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 |||||||| || || ||||| || || |||||||||||||| |||||||| |||||||| Sbjct: 332 gacaacctcaaaaaatggattggtcatccaagatttgagcttatccgtcatgatgtcact 391 Query: 61 gaaccactgctcgtggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatc 120 || || || | | ||||| || || ||||| || |||||||| || || || || || Sbjct: 392 gagcctttgatgattgaggtcgatcagatctaccatcttgcttgtcccgcatctcctatt 451 Query: 121 ttctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatg 180 |||||||| | || || || ||||| |||||||| || || ||||| || |||||||| Sbjct: 452 ttctacaaatataatcccgtgaagacaatcaagacaaacgtgattggcactctgaacatg 511 Query: 181 cttggacttgcaaa 194 ||||| |||||||| Sbjct: 512 cttgggcttgcaaa 525
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 123 ctacaagcacaaccctgtcaagaccatcaagac 155 ||||||||||||||| ||||||||||||||||| Sbjct: 28441812 ctacaagcacaaccccgtcaagaccatcaagac 28441844
>gb|AY619950.1| Nicotiana tabacum UDP-glucuronate decarboxylase 1 mRNA, complete cds Length = 1279 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 79 gttgaccaaatctatcaccttgcttgccctgcctcaccaatcttctacaagcacaaccct 138 ||||||| ||| |||||||||||||||||||| || || || || |||||| | || ||| Sbjct: 315 gttgaccgaatttatcaccttgcttgccctgcttcccctattttttacaagtataatcct 374 Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgc 191 || ||||| || ||||| ||||| |||| || |||||||| | |||||||| Sbjct: 375 gttaagacaattaagacaaatgtacttggaacaatgaacatgttgggacttgc 427
>dbj|AB183706.1| Oryza sativa (japonica cultivar-group) UXS-6 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1498 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 123 ctacaagcacaaccctgtcaagaccatcaagac 155 ||||||||||||||| ||||||||||||||||| Sbjct: 674 ctacaagcacaaccccgtcaagaccatcaagac 706
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 123 ctacaagcacaaccctgtcaagaccatcaagac 155 ||||||||||||||| ||||||||||||||||| Sbjct: 7564 ctacaagcacaaccccgtcaagaccatcaagac 7596
>dbj|AK099614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050E02, full insert sequence Length = 1965 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 123 ctacaagcacaaccctgtcaagaccatcaagac 155 ||||||||||||||| ||||||||||||||||| Sbjct: 543 ctacaagcacaaccccgtcaagaccatcaagac 575
>ref|NM_128436.3| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript variant AT2G28760.1 mRNA, complete cds Length = 1394 Score = 56.0 bits (28), Expect = 6e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||| || ||||| ||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 292 gacaatctcaagaaatggattggtcatccaagatttgagctaattcgtcatgatgtgact 351 Query: 61 gaaccactgctcgtggaggttgaccaaatcta 92 ||||| || |||| |||||||| |||||||| Sbjct: 352 gaacctcttttcgtcgaggttgatcaaatcta 383
>ref|NM_201826.1| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript variant AT2G28760.2 mRNA, complete cds Length = 1389 Score = 56.0 bits (28), Expect = 6e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||| || ||||| ||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 287 gacaatctcaagaaatggattggtcatccaagatttgagctaattcgtcatgatgtgact 346 Query: 61 gaaccactgctcgtggaggttgaccaaatcta 92 ||||| || |||| |||||||| |||||||| Sbjct: 347 gaacctcttttcgtcgaggttgatcaaatcta 378
>gb|AY128899.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase (At2g28760) mRNA, complete cds Length = 1234 Score = 56.0 bits (28), Expect = 6e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||| || ||||| ||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 208 gacaatctcaagaaatggattggtcatccaagatttgagctaattcgtcatgatgtgact 267 Query: 61 gaaccactgctcgtggaggttgaccaaatcta 92 ||||| || |||| |||||||| |||||||| Sbjct: 268 gaacctcttttcgtcgaggttgatcaaatcta 299
>gb|AY099703.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase (At2g28760) mRNA, complete cds Length = 1393 Score = 56.0 bits (28), Expect = 6e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||| || ||||| ||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 292 gacaatctcaagaaatggattggtcatccaagatttgagctaattcgtcatgatgtgact 351 Query: 61 gaaccactgctcgtggaggttgaccaaatcta 92 ||||| || |||| |||||||| |||||||| Sbjct: 352 gaacctcttttcgtcgaggttgatcaaatcta 383
>emb|BX818916.1|CNS0A9UJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 56.0 bits (28), Expect = 6e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1 gacaacctgaagaagtggatcggccacccaagatttgagctcatccgtcacgatgtcacc 60 ||||| || ||||| ||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 272 gacaatctcaagaaatggattggtcatccaagatttgagctaattcgtcatgatgtgact 331 Query: 61 gaaccactgctcgtggaggttgaccaaatcta 92 ||||| || |||| |||||||| |||||||| Sbjct: 332 gaacctcttttcgtcgaggttgatcaaatcta 363
>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1336 Score = 56.0 bits (28), Expect = 6e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 123 ctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgct 182 ||||||| ||||||| |||||||||||||||| || || ||||||| |||||||||| Sbjct: 596 ctacaagtacaaccccatcaagaccatcaagaccaacgtggttgggacactgaacatgct 655 Query: 183 tgga 186 |||| Sbjct: 656 tgga 659
>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full insert sequence Length = 1820 Score = 56.0 bits (28), Expect = 6e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 123 ctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgct 182 ||||||| ||||||| |||||||||||||||| || || ||||||| |||||||||| Sbjct: 723 ctacaagtacaaccccatcaagaccatcaagaccaacgtggttgggacactgaacatgct 782 Query: 183 tgga 186 |||| Sbjct: 783 tgga 786
>ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2); catalytic/ dTDP-glucose 4,6-dehydratase AT3G62830 (UXS2) mRNA, complete cds Length = 1338 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgg 185 |||||||| |||||||||||||| |||| || |||||||||||||| Sbjct: 607 gtcaagactatcaagacgaatgtggttggaacattgaacatgcttgg 653
>gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRNA, complete cds Length = 1338 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgg 185 |||||||| |||||||||||||| |||| || |||||||||||||| Sbjct: 607 gtcaagactatcaagacgaatgtggttggaacattgaacatgcttgg 653
>gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds Length = 1663 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgg 185 |||||||| |||||||||||||| |||| || |||||||||||||| Sbjct: 760 gtcaagactatcaagacgaatgtggttggaacattgaacatgcttgg 806
>gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS2) mRNA, complete cds Length = 1338 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgg 185 |||||||| |||||||||||||| |||| || |||||||||||||| Sbjct: 607 gtcaagactatcaagacgaatgtggttggaacattgaacatgcttgg 653
>emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-glucose 4-6-dehydratases Length = 1660 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgg 185 |||||||| |||||||||||||| |||| || |||||||||||||| Sbjct: 746 gtcaagactatcaagacgaatgtggttggaacattgaacatgcttgg 792
>dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G06, full insert sequence Length = 1057 Score = 50.1 bits (25), Expect = 0.004 Identities = 52/61 (85%) Strand = Plus / Plus Query: 126 caagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgg 185 |||| ||||||| |||||||||||||||| || || ||||||| ||||||||||||| Sbjct: 1 caagtacaaccccatcaagaccatcaagaccaacgtggttgggacactgaacatgcttgg 60 Query: 186 a 186 | Sbjct: 61 a 61
>gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydratase-like protein mRNA, partial cds Length = 773 Score = 48.1 bits (24), Expect = 0.016 Identities = 48/56 (85%) Strand = Plus / Plus Query: 131 acaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgga 186 ||||||| |||||||||||||||| || || ||||||| |||||||||||||| Sbjct: 1 acaaccccatcaagaccatcaagaccaacgtggttgggacactgaacatgcttgga 56
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 48.1 bits (24), Expect = 0.016 Identities = 39/44 (88%) Strand = Plus / Plus Query: 73 gtggaggttgaccaaatctatcaccttgcttgccctgcctcacc 116 |||||||||||| ||||||| | ||||| |||||||||||||| Sbjct: 1222411 gtggaggttgacgaaatctacaatcttgcctgccctgcctcacc 1222454
>gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS2) mRNA, complete cds Length = 1380 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Plus Query: 123 ctacaagcacaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgct 182 ||||||| ||||||| |||||||| |||||||| ||||| |||| || | |||||||| Sbjct: 474 ctacaagtacaaccccgtcaagacaatcaagaccaatgtggttggtacactcaacatgct 533 Query: 183 tgga 186 |||| Sbjct: 534 tgga 537
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 48.1 bits (24), Expect = 0.016 Identities = 42/48 (87%) Strand = Plus / Plus Query: 150 caagacgaatgtcattgggaccttgaacatgcttggacttgcaaagag 197 |||||| ||||| || ||||||||||||||||| ||| | |||||||| Sbjct: 38050 caagacaaatgtgatggggaccttgaacatgctgggattggcaaagag 38097
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 48.1 bits (24), Expect = 0.016 Identities = 39/44 (88%) Strand = Plus / Minus Query: 97 cttgcttgccctgcctcaccaatcttctacaagcacaaccctgt 140 |||||||| |||||||| || ||||||||||| |||||||||| Sbjct: 56444 cttgcttgtcctgcctctcctatcttctacaaatacaaccctgt 56401 Score = 42.1 bits (21), Expect = 0.97 Identities = 42/49 (85%) Strand = Plus / Minus Query: 4 aacctgaagaagtggatcggccacccaagatttgagctcatccgtcacg 52 ||||| |||||||||||||| ||||| || ||||| || || ||||||| Sbjct: 56637 aacctcaagaagtggatcggtcaccccaggtttgaacttattcgtcacg 56589
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 46.1 bits (23), Expect = 0.062 Identities = 47/55 (85%) Strand = Plus / Plus Query: 131 acaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgg 185 ||||||| || |||||||||||||| | ||||| |||||| | ||||||||||| Sbjct: 1602012 acaacccggtgaagaccatcaagacaagcgtcatggggaccatcaacatgcttgg 1602066
>gb|AF385328.1|AF385328 Filobasidiella neoformans UDP-glucuronic acid decarboxylase Uxs1p (UXS1) mRNA, complete cds Length = 1233 Score = 46.1 bits (23), Expect = 0.062 Identities = 32/35 (91%) Strand = Plus / Plus Query: 76 gaggttgaccaaatctatcaccttgcttgccctgc 110 ||||||||||| ||||| |||||||| |||||||| Sbjct: 451 gaggttgaccagatctaccaccttgcctgccctgc 485
>gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds Length = 1701 Score = 46.1 bits (23), Expect = 0.062 Identities = 41/47 (87%) Strand = Plus / Plus Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttgg 185 |||||||| |||||||||||||| |||| || | |||||||||||| Sbjct: 760 gtcaagactatcaagacgaatgtggttggaacatagaacatgcttgg 806
>ref|XM_572003.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1397 Score = 46.1 bits (23), Expect = 0.062 Identities = 32/35 (91%) Strand = Plus / Plus Query: 76 gaggttgaccaaatctatcaccttgcttgccctgc 110 ||||||||||| ||||| |||||||| |||||||| Sbjct: 492 gaggttgaccagatctaccaccttgcctgccctgc 526
>gb|AY106346.1| Zea mays PCO069392 mRNA sequence Length = 1708 Score = 46.1 bits (23), Expect = 0.062 Identities = 56/67 (83%) Strand = Plus / Plus Query: 131 acaaccctgtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttggacttg 190 ||||||| |||| || |||||||| ||||| ||||||| |||||||||||||| | | Sbjct: 672 acaaccccatcaaaacaatcaagaccaatgtggttgggactctgaacatgcttggattgg 731 Query: 191 caaagag 197 ||||||| Sbjct: 732 caaagag 738
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 40 ctcatccgtcacgatgtcaccgaacc 65 |||||||||||||| ||||||||||| Sbjct: 198109 ctcatccgtcacgacgtcaccgaacc 198134
>gb|AF542190.1| Triticum aestivum dTDP-glucose-4-6-dehydratase-like protein mRNA, partial cds Length = 800 Score = 44.1 bits (22), Expect = 0.25 Identities = 67/82 (81%) Strand = Plus / Plus Query: 74 tggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttctacaagcaca 133 ||||||| ||||| ||||| ||||| || ||||| ||||| || | ||||||| || Sbjct: 69 tggaggtggaccagatctaccacctcgcctgcccggcctcccccgtgcactacaagttca 128 Query: 134 accctgtcaagaccatcaagac 155 |||| ||||||||||||||||| Sbjct: 129 accccgtcaagaccatcaagac 150
>gb|AY677179.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS3) mRNA, complete cds Length = 1576 Score = 44.1 bits (22), Expect = 0.25 Identities = 67/82 (81%) Strand = Plus / Plus Query: 74 tggaggttgaccaaatctatcaccttgcttgccctgcctcaccaatcttctacaagcaca 133 ||||||| ||||| ||||| ||||| || ||||| ||||| || | ||||||| || Sbjct: 563 tggaggtggaccagatctaccacctcgcctgcccggcctcccccgtgcactacaagttca 622 Query: 134 accctgtcaagaccatcaagac 155 |||| ||||||||||||||||| Sbjct: 623 accccgtcaagaccatcaagac 644
>ref|NM_130333.1| Arabidopsis thaliana UXS4 (UDP-XYLOSE SYNTHASE 4); catalytic AT2G47650 (UXS4) mRNA, complete cds Length = 1529 Score = 42.1 bits (21), Expect = 0.97 Identities = 51/61 (83%) Strand = Plus / Plus Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgcaaagaga 198 |||||||| |||||||||||||| | || || ||||||||| | ||||| || |||||| Sbjct: 706 gtcaagactatcaagacgaatgtggtgggaacattgaacatgttgggactagcgaagaga 765 Query: 199 g 199 | Sbjct: 766 g 766
>gb|BT022016.1| Arabidopsis thaliana At2g47650 gene, complete cds Length = 1480 Score = 42.1 bits (21), Expect = 0.97 Identities = 51/61 (83%) Strand = Plus / Plus Query: 139 gtcaagaccatcaagacgaatgtcattgggaccttgaacatgcttggacttgcaaagaga 198 |||||||| |||||||||||||| | || || ||||||||| | ||||| || |||||| Sbjct: 625 gtcaagactatcaagacgaatgtggtgggaacattgaacatgttgggactagcgaagaga 684 Query: 199 g 199 | Sbjct: 685 g 685
>emb|BX005130.10| Mouse DNA sequence from clone RP23-475L14 on chromosome 2, complete sequence Length = 127298 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 catcaagacgaatgtcattgggacc 171 ||||||||||| ||||||||||||| Sbjct: 111654 catcaagacgactgtcattgggacc 111678
>gb|AY922314.1| Populus tomentosa UDP-glucuronic acid decarboxylase 2 (UXS2) mRNA, complete cds Length = 1466 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 tacaagcacaaccctgtcaagaccatcaagac 155 |||||||||||||| |||||||| || ||||| Sbjct: 698 tacaagcacaacccggtcaagacaataaagac 729
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 40.1 bits (20), Expect = 3.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 150 caagacgaatgtcattgggaccttgaacatgcttgg 185 |||||||||||| |||| || |||||||||||||| Sbjct: 86212 caagacgaatgtggttggaacattgaacatgcttgg 86247 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,558,077 Number of Sequences: 3902068 Number of extensions: 1558077 Number of successful extensions: 27008 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 26846 Number of HSP's gapped (non-prelim): 155 length of query: 293 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 271 effective length of database: 17,147,199,772 effective search space: 4646891138212 effective search space used: 4646891138212 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)