>CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)|
          Length = 2663

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
 Frame = +2

Query: 113  NPHCLSRATDCLTE---DPQGNXEEKAPGRSQVHKK----------DITVDLLLAVESSL 253
            NPH  SRAT   TE   + + +  E     S +HK+          ++T D++  +++ +
Sbjct: 2330 NPHVTSRATQLTTEKIRELENSLHEAK--ESAMHKESKIIKMQKELEVTNDIIAKLQAKV 2387

Query: 254  PNGHLGDLCKENTDD---ILIDN--RGAKDGYQPFENAKHPLEKLPLLTENVAKTALSEV 418
               H  + C E T +   +L D    GAK   +  E+ K  L K+ L     AK    E+
Sbjct: 2388 ---HESNKCLEKTKETIQVLQDKVALGAKPYKEEIEDLKMKLVKIDLEKMKNAKEFEKEI 2444

Query: 419  GNTSEPVEAEKNLVPLVKQEV 481
              T   VE +K ++ L+++ +
Sbjct: 2445 SATKATVEYQKEVIRLLRENL 2465

>RAD52_CANGA (Q6FSW2) DNA repair and recombination protein RAD52|
          Length = 505

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = +2

Query: 230 LLAVESSLPNGHLGDLCKENTDDILIDNRGAKDGYQPFENAKHPLEKLPLLTENVAKTAL 409
           L+   SS P+    +  KENT DI      A D YQ  EN    L+  P    +  K  +
Sbjct: 274 LMNKNSSDPDRRFNNAPKENTGDITFVTARAADSYQSTENVPENLKFDPKYVPHSMKLTI 333

Query: 410 SEVGNTSEPV 439
            +  NTS+ +
Sbjct: 334 DQ--NTSKHI 341

>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)|
          Length = 1075

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 24/68 (35%), Positives = 32/68 (47%)
 Frame = -1

Query: 495 SFSVITSCLTSGTKFFSASTGSEVFPTSDRAVLATFSVSNGNFSSGCLAFSNG*YPSLAP 316
           S SVI+S  T+ T  FS S+ S V PTS     +T   S    SS   + S+    S +P
Sbjct: 689 SSSVISSSTTTSTSIFSESSTSSVIPTSS----STSGSSESKTSSASSSSSSSSISSESP 744

Query: 315 RLSMRISS 292
           +     SS
Sbjct: 745 KSPTNSSS 752

>PITX1_DROME (O18400) Pituitary homeobox 1 homolog (D-PTX1)|
          Length = 509

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
 Frame = +2

Query: 230 LLAVESSLPNGHLGDLCKENTDDILIDNRGAKDGYQPFENAKHPLEKLPLLTENVAKTAL 409
           + AV +SL + HL +    +T  I   +R  KDG          + +  + TEN++ +  
Sbjct: 192 MTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDG-------NRSVNETTIKTENISSSGH 244

Query: 410 SEVGNTS--EPVEAEKNLVPLVKQEVIT-EKLPVLKHVYS 520
            E   TS  EP   +KN     ++   T ++L  L+H +S
Sbjct: 245 DEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFS 284

>TA2R5_PONPY (Q645U0) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 367 LQWMLGVLKRLIPIFGSSVVYEDIVSVFFAQISQMTIW*GTFNS 236
           LQW++ +   L P+F SS  +   +S+F+  +SQ ++W  TF S
Sbjct: 58  LQWLIILDLSLFPLFQSSR-WLRYLSIFWVLVSQASLWFATFLS 100

>TA2R5_PANTR (Q646A4) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 367 LQWMLGVLKRLIPIFGSSVVYEDIVSVFFAQISQMTIW*GTFNS 236
           LQW++ +   L P+F SS  +   +S+F+  +SQ ++W  TF S
Sbjct: 58  LQWLIILDLSLFPLFQSSR-WLRYLSIFWVLVSQASLWFATFLS 100

>TA2R5_PANPA (Q646D5) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 367 LQWMLGVLKRLIPIFGSSVVYEDIVSVFFAQISQMTIW*GTFNS 236
           LQW++ +   L P+F SS  +   +S+F+  +SQ ++W  TF S
Sbjct: 58  LQWLIILDLSLFPLFQSSR-WLRYLSIFWVLVSQASLWFATFLS 100

>TA2R5_HUMAN (Q9NYW4) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 367 LQWMLGVLKRLIPIFGSSVVYEDIVSVFFAQISQMTIW*GTFNS 236
           LQW++ +   L P+F SS  +   +S+F+  +SQ ++W  TF S
Sbjct: 58  LQWLIILDLSLFPLFQSSR-WLRYLSIFWVLVSQASLWFATFLS 100

>TA2R5_GORGO (Q645Z1) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 367 LQWMLGVLKRLIPIFGSSVVYEDIVSVFFAQISQMTIW*GTFNS 236
           LQW++ +   L P+F SS  +   +S+F+  +SQ ++W  TF S
Sbjct: 58  LQWLIILDLSLFPLFQSSR-WLRYLSIFWVLVSQASLWFATFLS 100

>ORC2_MOUSE (Q60862) Origin recognition complex subunit 2|
          Length = 576

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
 Frame = +2

Query: 305 IDNRGAKDGYQP---FENAKHPLEKLPLLTENVAKTALSEVGNTSEPVEAEKNLVPLVKQ 475
           + N  AKDG      F+  KHP E   L  E +AKT+  +    S   E  KN+    K 
Sbjct: 82  LGNGSAKDGRNKVYSFQQRKHPEEMTKLALE-LAKTSGKKDPLDSNDPEITKNIAQKSKG 140

Query: 476 EVITEKLPVLKH 511
              +EK P++ +
Sbjct: 141 HSTSEKAPLVNN 152

>TA2R5_PAPHA (Q646E6) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 367 LQWMLGVLKRLIPIFGSSVVYEDIVSVFFAQISQMTIW*GTFNS 236
           LQW++ +   L P+F SS  +   ++VF+  +SQ ++W  TF S
Sbjct: 58  LQWLIILDLSLFPLFQSSS-WLRYLNVFWVLVSQASLWFATFLS 100

>SPIKE_IBV6 (P05135) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1; Spike protein S2]
          Length = 1163

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -2

Query: 215 CLSYVPGSSLE---LFLXYSPVDLLLDNQLPCLDNVGFTDRVGLSY 87
           CL YV G+SLE   LF  Y PV    DN L  +++VG  + + L Y
Sbjct: 611 CLQYVCGNSLECRKLFQQYGPV---CDNILSVVNSVGQKEDMELLY 653

>SKN7_YEAST (P38889) Transcription factor SKN7 (Peroxide sensitivity protein|
           POS9)
          Length = 622

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 167 NXEEKAPGRSQVHKKDITVDLL-LAVESSLPNGHLGDLCKENTDDILIDNRGAKDGYQPF 343
           N + K P + +V   +    LL    E + PN   G L  E+T ++L+ N  +KD    F
Sbjct: 184 NIKRKIPAQRKVLLDESQKALLHFNSEGTNPNNPSGSLLNESTTELLLSNTVSKDA---F 240

Query: 344 ENAKHPLEKL 373
            N +  ++KL
Sbjct: 241 GNLRRRVDKL 250

>NUGM_NEUCR (P23710) NADH-ubiquinone oxidoreductase 30.4 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-30KD) (CI-31KD)
          Length = 283

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = -2

Query: 380 AMVISPVDAWRSQTADTHL---WLLGCL*GYRQCFLCTNLPNDHLVRNFQQLGVGPL 219
           A V++P D ++S+  + H    WL+GCL  Y Q F   ++  D L       GV P+
Sbjct: 57  AAVVNPADKYQSKADNLHKYGSWLMGCLPKYIQQF---SVWKDELTIYISPAGVIPV 110

>FLO1_YEAST (P32768) Flocculation protein FLO1 precursor (Flocculin-1)|
          Length = 1537

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 495  SFSVITSCLTSGTKFFSASTGSEVFPTS 412
            S SVI+S  T+ T  FS S+ S V PTS
Sbjct: 1140 SSSVISSSTTTSTSIFSESSKSSVIPTS 1167

>VSIB_TRYBB (P07208) Variant surface glycoprotein ILTAT 1.1BC precursor (VSG)|
          Length = 471

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +2

Query: 125 LSRATDCLTEDPQGNXEEKAPGRSQVHKKDITVDLLLAVESSLPNGHLGDLCK--ENTDD 298
           +S+ T+C TE P+   + K P ++ + KK    DL LA+   +   + G  C    ++D 
Sbjct: 159 VSKTTECNTESPE---DTKEPDQTTLSKKQGLKDLKLALRVKVACKNGGGACSAASSSDK 215

Query: 299 ILIDN 313
           I I N
Sbjct: 216 IHITN 220

>SPIKE_IBVK (P12650) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1; Spike protein S2]
          Length = 1162

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -2

Query: 215 CLSYVPGSSLE---LFLXYSPVDLLLDNQLPCLDNVG 114
           CL Y+ G+SLE   LF  Y PV    DN L  +++VG
Sbjct: 610 CLQYICGNSLECRNLFQQYGPV---CDNMLSVVNSVG 643

>POLG_BTMV (Q6XW15) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral gen
          Length = 3085

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
 Frame = +2

Query: 224  DLLLAVESSLPNGHLGDL---CKENTDDILIDNRGAKDGYQPFENAKHPLEK-------- 370
            D  +  + SL    +G+    C E+ DD LID    K G Q +   K+  +K        
Sbjct: 1941 DESVQTDISLVQSEIGEYRQKCMED-DDELIDFIKQKPGIQAYF-MKNGSDKALQVDLTP 1998

Query: 371  -LPLLTENVAKTAL--------SEVGNTSEPVEAEKNLVPLVKQEVITEK 493
             +PLL+   AKTA         SE+  T  P+   KN+VP   +EV+ E+
Sbjct: 1999 HIPLLS--CAKTATIAGFPERESELRQTGTPIVVNKNVVPGEHKEVVREE 2046

>YN81_CAEEL (Q03610) Hypothetical protein ZC84.1 in chromosome III|
          Length = 1416

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 62  EAKHFAGAGRIDQLCQ*NPHCLS 130
           E   F+G+GR+  +CQ N  CLS
Sbjct: 2   EQSQFSGSGRVGDVCQYNTDCLS 24

>SOS_DROME (P26675) Protein son of sevenless|
          Length = 1596

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
 Frame = +2

Query: 203 HKKDITVDLLLAVESSLPNGHLGDLCKENTDDILIDNRGAKDGYQPFENAKHPLEKLPLL 382
           HK D   DLL+ +  S+ + HL        D IL D              KHPL ++P  
Sbjct: 575 HKHDWMADLLMVITKSMLDRHL--------DSILQD-----------IERKHPL-RMP-- 612

Query: 383 TENVAKTALSEVGNTSEPVEAEKNLVPLVKQEVITEKLPVLK-HVYS 520
           +  + K A+ + G+     E E   VP++K   + + +  L  H+Y+
Sbjct: 613 SPEIYKFAVPDSGDNIVLEERESAGVPMIKGATLCKLIERLTYHIYA 659


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,686,711
Number of Sequences: 219361
Number of extensions: 1626253
Number of successful extensions: 3980
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3979
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)