ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6f01 |
|---|---|
| Clone Library Name | barley_pub |
>RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2| Length = 209 Score = 162 bits (409), Expect(2) = 3e-50 Identities = 82/117 (70%), Positives = 88/117 (75%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P S ISMANSRQNIRKLVKDGFIIRKP KI EAK+KGRHSGYGKR+GTR Sbjct: 26 PNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTR 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 EARLPTKI KYRE+KKID+HMYHDMY+KVKGN+FKNKRVLMESI Sbjct: 86 EARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESI 142 Score = 55.5 bits (132), Expect(2) = 3e-50 Identities = 24/27 (88%), Positives = 27/27 (100%) Frame = +2 Query: 14 VSLKLQKRLASSVLKCGKGKVWLDPNE 94 VSLK+QKRLA+SV+KCGKGKVWLDPNE Sbjct: 2 VSLKIQKRLAASVMKCGKGKVWLDPNE 28
>RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1| Length = 214 Score = 158 bits (399), Expect(2) = 2e-49 Identities = 80/117 (68%), Positives = 86/117 (73%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P S+ ISMANSRQNIRKLVKDGFIIRKP KI AK KGRHSGYGKR+GTR Sbjct: 26 PNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARKMKIAKMKGRHSGYGKRKGTR 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 EARLPTK+ KYRE KKIDKHMYHDMY++VKGN+FKNKRVLMESI Sbjct: 86 EARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMYHDMYMRVKGNVFKNKRVLMESI 142 Score = 56.6 bits (135), Expect(2) = 2e-49 Identities = 25/30 (83%), Positives = 29/30 (96%) Frame = +2 Query: 14 VSLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 VSLKLQKRLA+SV+KCGKGKVWLDPNE ++ Sbjct: 2 VSLKLQKRLAASVMKCGKGKVWLDPNESSD 31
>RL19C_ARATH (P49693) 60S ribosomal protein L19-3| Length = 208 Score = 157 bits (396), Expect(2) = 1e-48 Identities = 79/117 (67%), Positives = 86/117 (73%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + ISMANSRQNIRKLVKDGFIIRKP KI AK+KGRHSGYGKR+GTR Sbjct: 26 PNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARQLNIAKRKGRHSGYGKRKGTR 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 EARLPTK+ KYRE KKID+HMYHDMY+KVKGN+FKNKRVLMESI Sbjct: 86 EARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMYHDMYMKVKGNVFKNKRVLMESI 142 Score = 55.1 bits (131), Expect(2) = 1e-48 Identities = 26/27 (96%), Positives = 26/27 (96%) Frame = +2 Query: 14 VSLKLQKRLASSVLKCGKGKVWLDPNE 94 VSLKLQKRLASSVLKCGK KVWLDPNE Sbjct: 2 VSLKLQKRLASSVLKCGKRKVWLDPNE 28
>RL19_DROME (P36241) 60S ribosomal protein L19| Length = 203 Score = 128 bits (322), Expect(2) = 1e-40 Identities = 61/117 (52%), Positives = 78/117 (66%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P I+ NSRQNIRKL+KDG II+KP + EA++KGRH G+GKR+GT Sbjct: 26 PNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+PTK+ KYR++KKID+H+YHD+Y+K KGN+FKNKRVLME I Sbjct: 86 NARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYI 142 Score = 56.6 bits (135), Expect(2) = 1e-40 Identities = 25/29 (86%), Positives = 28/29 (96%) Frame = +2 Query: 17 SLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 SLKLQKRLA+SVL+CGK KVWLDPNE+NE Sbjct: 3 SLKLQKRLAASVLRCGKKKVWLDPNEINE 31
>RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19| Length = 197 Score = 125 bits (315), Expect(2) = 6e-39 Identities = 62/117 (52%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKLVKDG IIRKP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME I Sbjct: 86 NARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 6e-39 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_RAT (P84100) 60S ribosomal protein L19| Length = 196 Score = 125 bits (315), Expect(2) = 6e-39 Identities = 61/117 (52%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKL+KDG IIRKP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME I Sbjct: 86 NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 6e-39 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_PONPY (Q5RB99) 60S ribosomal protein L19| Length = 196 Score = 125 bits (315), Expect(2) = 6e-39 Identities = 61/117 (52%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKL+KDG IIRKP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME I Sbjct: 86 NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 6e-39 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_MOUSE (P84099) 60S ribosomal protein L19| Length = 196 Score = 125 bits (315), Expect(2) = 6e-39 Identities = 61/117 (52%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKL+KDG IIRKP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME I Sbjct: 86 NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 6e-39 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_MACFA (Q8HXN9) 60S ribosomal protein L19| Length = 196 Score = 125 bits (315), Expect(2) = 6e-39 Identities = 61/117 (52%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKL+KDG IIRKP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME I Sbjct: 86 NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 6e-39 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_HUMAN (P84098) 60S ribosomal protein L19| Length = 196 Score = 125 bits (315), Expect(2) = 6e-39 Identities = 61/117 (52%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKL+KDG IIRKP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME I Sbjct: 86 NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 6e-39 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19| Length = 196 Score = 125 bits (315), Expect(2) = 6e-39 Identities = 61/117 (52%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKL+KDG IIRKP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME I Sbjct: 86 NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 6e-39 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_BRARE (Q6P5L3) 60S ribosomal protein L19| Length = 196 Score = 122 bits (306), Expect(2) = 6e-38 Identities = 60/117 (51%), Positives = 75/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKLVKDG II+KP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YREAKKID+HMYH +YL+ KGN+FKNKR+LME I Sbjct: 86 NARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 6e-38 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_ICTPU (Q90YU8) 60S ribosomal protein L19| Length = 196 Score = 120 bits (301), Expect(2) = 2e-37 Identities = 59/117 (50%), Positives = 75/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + I+ ANSRQ IRKLVKDG II+KP + A++KGRH G GKR+GT Sbjct: 26 PNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K+ +YRE+KKID+HMYH +YL+ KGN+FKNKR+LME I Sbjct: 86 NARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHI 142 Score = 53.9 bits (128), Expect(2) = 2e-37 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L+LQKRLASSVL+CGK KVWLDPNE NE Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNE 31
>RL19_CAEEL (O02639) 60S ribosomal protein L19| Length = 198 Score = 120 bits (301), Expect(2) = 5e-37 Identities = 59/117 (50%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + IS ANSRQ+IR+LV DG IIRKP + EA++KGRH+GYGKRRGT Sbjct: 26 PNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTA 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 AR+P K +YR+AKK+DKH+YH++YL+ KGN FKNK+ L+E I Sbjct: 86 NARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYI 142 Score = 52.8 bits (125), Expect(2) = 5e-37 Identities = 23/29 (79%), Positives = 28/29 (96%) Frame = +2 Query: 17 SLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 +L+LQKRLAS+VLKCGK +VWLDPNEV+E Sbjct: 3 NLRLQKRLASAVLKCGKHRVWLDPNEVSE 31
>RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specific protein| V14) (22 kDa calmodulin-binding protein) Length = 186 Score = 117 bits (293), Expect(2) = 5e-37 Identities = 59/117 (50%), Positives = 72/117 (61%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P ++MANSR N+R+L+ GFI+RKP + AK+ GRH G G R GTR Sbjct: 26 PNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTR 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 EARLP+KI KYREAKKIDKH Y ++YLK KGN+FKNKR L+E I Sbjct: 86 EARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYI 142 Score = 55.8 bits (133), Expect(2) = 5e-37 Identities = 23/28 (82%), Positives = 28/28 (100%) Frame = +2 Query: 14 VSLKLQKRLASSVLKCGKGKVWLDPNEV 97 VSLKLQKRLA+S+LKCGKG+VW+DPNE+ Sbjct: 2 VSLKLQKRLAASILKCGKGRVWIDPNEI 29
>RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)| Length = 192 Score = 120 bits (300), Expect(2) = 2e-36 Identities = 58/117 (49%), Positives = 75/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + IS ANSRQN+RKL+KDG +IRKP + AK+ GRH+GYGKR+GT Sbjct: 25 PNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTA 84 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 EAR+P+ + KYRE+ KIDKH+YH +YL+ KGN FK+KR L+E I Sbjct: 85 EARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHI 141 Score = 50.8 bits (120), Expect(2) = 2e-36 Identities = 21/29 (72%), Positives = 27/29 (93%) Frame = +2 Query: 17 SLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 +L+ QKRLA+SVLKCGK KVW+DPNE++E Sbjct: 2 NLRTQKRLAASVLKCGKRKVWMDPNEISE 30
>RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L)| Length = 188 Score = 114 bits (284), Expect(2) = 4e-32 Identities = 55/117 (47%), Positives = 76/117 (64%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P ++ I+ ANSR IRKLVK+G I++K + ++K++GRHSGYGKR+GTR Sbjct: 25 PNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTR 84 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESI 437 EARLP+++ KYR+A KIDKH+YH +Y + KGN FK+KR L+E I Sbjct: 85 EARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHI 141 Score = 42.7 bits (99), Expect(2) = 4e-32 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = +2 Query: 17 SLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 +L+ QKRLA+SV+ GK KVWLDPNE +E Sbjct: 2 NLRTQKRLAASVVGVGKRKVWLDPNETSE 30
>RL19_PYRHO (O59437) 50S ribosomal protein L19e| Length = 150 Score = 74.3 bits (181), Expect(2) = 2e-20 Identities = 39/113 (34%), Positives = 59/113 (52%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + ++ A +R++IR+L+K+G I +KP + E K+KGRH G G R+G + Sbjct: 26 PEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKK 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 425 AR+ K K +E KKID+ Y +Y++ KG FKNK L Sbjct: 86 TARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138 Score = 43.1 bits (100), Expect(2) = 2e-20 Identities = 15/29 (51%), Positives = 26/29 (89%) Frame = +2 Query: 17 SLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 +LK+Q+R+A+ +LKCG+ +VW+DP +V+E Sbjct: 3 TLKMQRRIAAELLKCGENRVWIDPEKVDE 31
>RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e| Length = 151 Score = 75.9 bits (185), Expect(2) = 3e-20 Identities = 40/113 (35%), Positives = 59/113 (52%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P R ++ A +R++IR+L+K+G I +KP K E K+KGRH G G R+G + Sbjct: 26 PERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKK 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 425 AR+ K K +E KKID+ Y +Y++ KG FK+K L Sbjct: 86 TARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQL 138 Score = 40.8 bits (94), Expect(2) = 3e-20 Identities = 13/29 (44%), Positives = 25/29 (86%) Frame = +2 Query: 17 SLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 +LK+Q+R+A+ +LKCG+ ++W+DP V++ Sbjct: 3 TLKMQRRVAAELLKCGENRIWIDPERVDD 31
>RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)| Length = 150 Score = 73.6 bits (179), Expect(2) = 1e-19 Identities = 39/113 (34%), Positives = 58/113 (51%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P R ++ A +R++I++L+K+G I +KP K E K+KGRH G G R+G + Sbjct: 26 PERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKK 85 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 425 AR+ K K + KKID+ Y +Y++ KG FKNK L Sbjct: 86 TARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138 Score = 41.6 bits (96), Expect(2) = 1e-19 Identities = 12/29 (41%), Positives = 25/29 (86%) Frame = +2 Query: 17 SLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 +LK+Q+R+A+ +LKCG+ ++W+DP +++ Sbjct: 3 TLKMQRRIAAEILKCGENRIWIDPERIDD 31
>RL19_MAIZE (Q08066) 60S ribosomal protein L19 (Fragment)| Length = 62 Score = 55.8 bits (133), Expect(2) = 2e-17 Identities = 25/28 (89%), Positives = 27/28 (96%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 LKLQKRLA+S LKCGKGKVWLDPNEV+E Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSE 28 Score = 51.6 bits (122), Expect(2) = 2e-17 Identities = 25/32 (78%), Positives = 27/32 (84%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKI 182 P + ISMANSRQNIRKLVKDGFII+KP KI Sbjct: 23 PNEVSEISMANSRQNIRKLVKDGFIIKKPHKI 54
>RL19_METJA (P54043) 50S ribosomal protein L19e| Length = 151 Score = 63.9 bits (154), Expect(2) = 5e-15 Identities = 34/110 (30%), Positives = 53/110 (48%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + + MA S+ +IR L+K+G I +K +K E ++KGR G G RRG Sbjct: 28 PTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAA 87 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNK 416 AR P K + R++ KID+ +Y +Y KG F+++ Sbjct: 88 GARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSR 137 Score = 35.4 bits (80), Expect(2) = 5e-15 Identities = 11/29 (37%), Positives = 23/29 (79%) Frame = +2 Query: 14 VSLKLQKRLASSVLKCGKGKVWLDPNEVN 100 + + +Q+R+A+ +LKCG +VW+DP +++ Sbjct: 4 MDVSVQRRMAAEILKCGIERVWIDPTQLD 32
>RL19_METTH (O26129) 50S ribosomal protein L19e| Length = 148 Score = 62.0 bits (149), Expect(2) = 8e-15 Identities = 34/110 (30%), Positives = 52/110 (47%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P R +S A +R +++L+KDG I KP+K + K+KGR G G +G + Sbjct: 25 PERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAK 84 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNK 416 AR P K + R+ ++I+K Y +Y KG FK+K Sbjct: 85 GARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSK 134 Score = 36.6 bits (83), Expect(2) = 8e-15 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = +2 Query: 14 VSLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 ++L QKRLA+ +LK G ++W+DP ++E Sbjct: 1 MNLTTQKRLAADILKVGVNRIWIDPERIDE 30
>RL19_ARCFU (O28372) 50S ribosomal protein L19e| Length = 149 Score = 55.8 bits (133), Expect(2) = 4e-14 Identities = 31/109 (28%), Positives = 50/109 (45%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P I+ A ++Q+IR+L++ G I RKP K+KGR G+G R+G + Sbjct: 28 PAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAK 87 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKN 413 AR+P K + + +D+ Y +Y K KG F++ Sbjct: 88 GARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRS 136 Score = 40.4 bits (93), Expect(2) = 4e-14 Identities = 16/25 (64%), Positives = 21/25 (84%) Frame = +2 Query: 14 VSLKLQKRLASSVLKCGKGKVWLDP 88 + L LQ+RLA+SVLKCG+ +VW DP Sbjct: 4 MDLSLQRRLAASVLKCGENRVWFDP 28
>RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E)| Length = 149 Score = 63.2 bits (152), Expect(2) = 6e-14 Identities = 33/110 (30%), Positives = 52/110 (47%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P + MA ++ +IR L+ DG I++K +K E K+KG+ G G RRG + Sbjct: 25 PENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAK 84 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNK 416 AR P K + RE +KI++ Y +Y KG F+++ Sbjct: 85 GARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLYRMAKGGAFRSR 134 Score = 32.3 bits (72), Expect(2) = 6e-14 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +2 Query: 14 VSLKLQKRLASSVLKCGKGKVWLDPNEVNE 103 + + Q+R+A++VL CG +VW+DP + + Sbjct: 1 MDVSTQRRIAAAVLDCGIDRVWVDPENLEK 30
>RL19_AERPE (Q9YF93) 50S ribosomal protein L19e| Length = 155 Score = 45.8 bits (107), Expect(2) = 1e-08 Identities = 28/103 (27%), Positives = 45/103 (43%) Frame = +3 Query: 105 ISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTREARLPT 284 I A ++ ++R L+K G I P+K ++KGR G G+R+G ARL Sbjct: 33 IEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDP 92 Query: 285 KIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKN 413 K R+ + ID+ Y +Y+ KG F++ Sbjct: 93 KERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRD 135 Score = 32.0 bits (71), Expect(2) = 1e-08 Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = +2 Query: 23 KLQKRLASSVLKCGKGKVWLDPN-EVNEXLHGQLT 124 + Q+RLA+ +L G+ ++W+ P+ E+ E + G +T Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVT 38
>RL19_HALMA (P14119) 50S ribosomal protein L19e (Hmal19) (Hl24)| Length = 148 Score = 40.8 bits (94), Expect(2) = 5e-07 Identities = 27/107 (25%), Positives = 43/107 (40%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P R I+ A +R+++R+LV +G I K +K + + G G G R+G Sbjct: 25 PERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKA 84 Query: 267 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMF 407 AR +K + R+ + Y D+Y K G F Sbjct: 85 GARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEF 131 Score = 31.2 bits (69), Expect(2) = 5e-07 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDP 88 L QKRLA+ VL GK +VW +P Sbjct: 3 LSAQKRLAADVLDVGKNRVWFNP 25
>RL19_SULAC (O05639) 50S ribosomal protein L19e| Length = 150 Score = 52.0 bits (123), Expect = 6e-07 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 4/113 (3%) Frame = +3 Query: 87 PMRSTXISMANSRQNIRKLVKDGFIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 266 P R + A +R++I+KL+K+ +I P++ E K K R G G++ G+R Sbjct: 26 PERLEEVEEALTREDIKKLIKERAVIVNPKR---GISSGRLKERKHKRRSKGEGRKHGSR 82 Query: 267 EARLPTKIXXXXXXXXXXXXXXKY----REAKKIDKHMYHDMYLKVKGNMFKN 413 + + + +Y R+ IDKH Y +Y + KGN FKN Sbjct: 83 KGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLYKRAKGNYFKN 135
>RL19_SULSO (Q9UX89) 50S ribosomal protein L19e| Length = 151 Score = 44.7 bits (104), Expect = 1e-04 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 1/98 (1%) Frame = +3 Query: 120 SRQNIRKLVKDG-FIIRKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXX 296 +R IR L+KDG I+ K I + K G R+G + AR +K Sbjct: 37 TRDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMW 96 Query: 297 XXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFK 410 R+ K ID+H Y ++YLK KG +K Sbjct: 97 VKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>RL19E_HALSA (Q9HPB6) 50S ribosomal protein L19e| Length = 149 Score = 33.1 bits (74), Expect = 0.31 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +2 Query: 20 LKLQKRLASSVLKCGKGKVWLDPNEVNE 103 L QKRLA+ VL G+ +VW DP+ +E Sbjct: 4 LSAQKRLAADVLDVGENRVWFDPDAQSE 31
>LAMB2_MOUSE (Q61292) Laminin beta-2 chain precursor (S-laminin) (S-LAM)| Length = 1799 Score = 31.6 bits (70), Expect = 0.89 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -2 Query: 113 HGDXR*PHWGRARPCPC 63 HGD R P+ G+ RPCPC Sbjct: 914 HGDPRLPYGGQCRPCPC 930
>LAMB2_RAT (P15800) Laminin beta-2 chain precursor (S-laminin) (Laminin chain| B3) Length = 1801 Score = 31.6 bits (70), Expect = 0.89 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -2 Query: 113 HGDXR*PHWGRARPCPC 63 HGD R P+ G+ RPCPC Sbjct: 916 HGDPRLPYGGQCRPCPC 932
>NU1M_RAT (P03889) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 30.8 bits (68), Expect = 1.5 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -3 Query: 418 LLFLNMLPLTFRYMSWYMCLSIFFA 344 LL+ N LPLT + WY+ L IF A Sbjct: 288 LLWKNFLPLTLAFCMWYISLPIFLA 312
>NU1M_HYLLA (Q96126) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 29.6 bits (65), Expect = 3.4 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 418 LLFLNMLPLTFRYMSWYMCLSIFFAS 341 LL+ N LPLT + WY+ LS AS Sbjct: 288 LLWKNFLPLTLTLLMWYISLSTMIAS 313
>POLS_MOUSE (Q6PB75) DNA polymerase sigma (EC 2.7.7.7)| Length = 542 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 17/69 (24%) Frame = -2 Query: 278 EPSLPGTPTLTISRVTALLLGLMC-----------------PPCTRPGVDLLRLPDDETI 150 EPS P T LT+S + LL PPCT P V L T+ Sbjct: 334 EPSSPYTQRLTLSLSSPQLLSSGSSASSVSSLSGSDIDSDTPPCTTPSVYQFSLQAPTTL 393 Query: 149 LYQLPDVLP 123 + LP LP Sbjct: 394 MASLPTALP 402
>LAMB2_HUMAN (P55268) Laminin beta-2 chain precursor (S-laminin) (Laminin B1s| chain) Length = 1798 Score = 28.5 bits (62), Expect = 7.6 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -2 Query: 113 HGDXR*PHWGRARPCPC 63 H D R P+ G+ RPCPC Sbjct: 913 HRDPRLPYGGQCRPCPC 929
>PUR4_ARATH (Q9M8D3) Probable phosphoribosylformylglycinamidine synthase,| chloroplast precursor (EC 6.3.5.3) (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1387 Score = 28.5 bits (62), Expect = 7.6 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -1 Query: 267 PWYPYAYHIQSDGPSAW 217 PWYP ++ ++ GPS W Sbjct: 1357 PWYPTSWDVEKAGPSPW 1373
>NU1M_CHODI (Q70Y30) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 418 LLFLNMLPLTFRYMSWYMCLSIFFAS 341 LL+ N LPLT W++ SI FAS Sbjct: 288 LLWKNFLPLTLAMCMWHVSTSISFAS 313 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,841,432 Number of Sequences: 219361 Number of extensions: 984652 Number of successful extensions: 2892 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2785 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2886 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
