ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5p21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133P12, full insert sequence Length = 2407 Score = 601 bits (303), Expect = e-168 Identities = 435/479 (90%) Strand = Plus / Plus Query: 17 gctttattgaagtaccgattacctttgagggagatcattgtggacttctacaatgagttg 76 ||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||| || Sbjct: 1558 gctttgttgaagtaccgattaccattgagggaaatcattgtggatttctacaatgaactg 1617 Query: 77 aaaagcataacatctggctatgctacttttgactatgaagattctgagtatcaaaaatct 136 ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| | ||| Sbjct: 1618 aaaagcataacatctggatatgctacttttgattatgaagattctgagtaccaacagtct 1677 Query: 137 gatcttgttaagatggatattctacttaacggccagcctgttgatgctatggccactata 196 ||||||||||||||||||||| ||||||| || |||||||||||||||||||| || ||| Sbjct: 1678 gatcttgttaagatggatattttacttaatggtcagcctgttgatgctatggcaacaata 1737 Query: 197 atccataaccaaaaagctcagaaggttggaagagaattagtggataagctcaagaaattt 256 |||| ||||| |||||||||| |||||| |||||||||||||||| ||||||||||| Sbjct: 1738 gtccacaaccagaaagctcagagagttggacgagaattagtggataaactcaagaaattc 1797 Query: 257 atagaaaggcaaatgtttgagatcactatacaagcagcaattggttcaaaggttattgca 316 |||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||| Sbjct: 1798 atagaacggcaaatgtttgagatcactatacaagccgcagttggttcaaaggttatcgca 1857 Query: 317 agggaaactctgtcagcaatgagaaagaacgttctggccaagtgctatggtggtgatatc 376 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1858 agggaaactctgtcagcaatgagaaagaacgttctggccaagtgctatggtggtgatatt 1917 Query: 377 acccgcaaaaagaagctgctagagaagcagaaggaagggaagaagcgcatgaaacgtgtt 436 || |||||||||||| ||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 1918 actcgcaaaaagaagttgctagagaagcaaaaagaagggaagaagcgcatgaagcgtgta 1977 Query: 437 ggatccgtcgatattccccaagaggcattccacgagctactcaaggtctccagttcaaa 495 || ||||| |||||||| ||||| ||||| || |||||| | |||||||||| |||||| Sbjct: 1978 gggtccgttgatattcctcaagaagcatttcatgagctattaaaggtctccaattcaaa 2036
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 212 bits (107), Expect = 9e-52 Identities = 155/171 (90%) Strand = Plus / Minus Query: 325 tctgtcagcaatgagaaagaacgttctggccaagtgctatggtggtgatatcacccgcaa 384 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 2366367 tctgtcagcaatgagaaagaacgttctggccaagtgctatggtggtgatattactcgcaa 2366308 Query: 385 aaagaagctgctagagaagcagaaggaagggaagaagcgcatgaaacgtgttggatccgt 444 ||||||| ||||||||||||| || |||||||||||||||||||| ||||| || ||||| Sbjct: 2366307 aaagaagttgctagagaagcaaaaagaagggaagaagcgcatgaagcgtgtagggtccgt 2366248 Query: 445 cgatattccccaagaggcattccacgagctactcaaggtctccagttcaaa 495 |||||||| ||||| ||||| || |||||| | |||||||||| |||||| Sbjct: 2366247 tgatattcctcaagaagcatttcatgagctattaaaggtctccaattcaaa 2366197 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 17 gctttattgaagtaccgattacctttgagggagatcattgtggacttctacaatgagttg 76 ||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||| || Sbjct: 2368281 gctttgttgaagtaccgattaccattgagggaaatcattgtggatttctacaatgaactg 2368222 Query: 77 aaaagcataacatctggctatgctacttttgactatgaagattctgagta 126 ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2368221 aaaagcataacatctggatatgctacttttgattatgaagattctgagta 2368172 Score = 153 bits (77), Expect = 7e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 134 tctgatcttgttaagatggatattctacttaacggccagcctgttgatgctatggccact 193 |||||||||||||||||||||||| ||||||| || |||||||||||||||||||| || Sbjct: 2367453 tctgatcttgttaagatggatattttacttaatggtcagcctgttgatgctatggcaaca 2367394 Query: 194 ataatccataaccaaaaagctcagaaggttggaagagaattagtggataagctcaagaaa 253 ||| |||| ||||| |||||||||| |||||| |||||||||||||||| ||||||||| Sbjct: 2367393 atagtccacaaccagaaagctcagagagttggacgagaattagtggataaactcaagaaa 2367334 Query: 254 tttatagaa 262 || |||||| Sbjct: 2367333 ttcatagaa 2367325 Score = 99.6 bits (50), Expect = 9e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 263 aggcaaatgtttgagatcactatacaagcagcaattggttcaaaggttattgcaagggaa 322 ||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| Sbjct: 2367124 aggcaaatgtttgagatcactatacaagccgcagttggttcaaaggttatcgcaagggaa 2367065 Query: 323 ac 324 || Sbjct: 2367064 ac 2367063 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 aagggaaactctgtcagcaa 335 |||||||||||||||||||| Sbjct: 3875024 aagggaaactctgtcagcaa 3875005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 aagggaaactctgtcagcaa 335 |||||||||||||||||||| Sbjct: 3836968 aagggaaactctgtcagcaa 3836949
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 212 bits (107), Expect = 9e-52 Identities = 155/171 (90%) Strand = Plus / Minus Query: 325 tctgtcagcaatgagaaagaacgttctggccaagtgctatggtggtgatatcacccgcaa 384 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 88168 tctgtcagcaatgagaaagaacgttctggccaagtgctatggtggtgatattactcgcaa 88109 Query: 385 aaagaagctgctagagaagcagaaggaagggaagaagcgcatgaaacgtgttggatccgt 444 ||||||| ||||||||||||| || |||||||||||||||||||| ||||| || ||||| Sbjct: 88108 aaagaagttgctagagaagcaaaaagaagggaagaagcgcatgaagcgtgtagggtccgt 88049 Query: 445 cgatattccccaagaggcattccacgagctactcaaggtctccagttcaaa 495 |||||||| ||||| ||||| || |||||| | |||||||||| |||||| Sbjct: 88048 tgatattcctcaagaagcatttcatgagctattaaaggtctccaattcaaa 87998 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 17 gctttattgaagtaccgattacctttgagggagatcattgtggacttctacaatgagttg 76 ||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||| || Sbjct: 90082 gctttgttgaagtaccgattaccattgagggaaatcattgtggatttctacaatgaactg 90023 Query: 77 aaaagcataacatctggctatgctacttttgactatgaagattctgagta 126 ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 90022 aaaagcataacatctggatatgctacttttgattatgaagattctgagta 89973 Score = 153 bits (77), Expect = 7e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 134 tctgatcttgttaagatggatattctacttaacggccagcctgttgatgctatggccact 193 |||||||||||||||||||||||| ||||||| || |||||||||||||||||||| || Sbjct: 89254 tctgatcttgttaagatggatattttacttaatggtcagcctgttgatgctatggcaaca 89195 Query: 194 ataatccataaccaaaaagctcagaaggttggaagagaattagtggataagctcaagaaa 253 ||| |||| ||||| |||||||||| |||||| |||||||||||||||| ||||||||| Sbjct: 89194 atagtccacaaccagaaagctcagagagttggacgagaattagtggataaactcaagaaa 89135 Query: 254 tttatagaa 262 || |||||| Sbjct: 89134 ttcatagaa 89126 Score = 99.6 bits (50), Expect = 9e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 263 aggcaaatgtttgagatcactatacaagcagcaattggttcaaaggttattgcaagggaa 322 ||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| Sbjct: 88925 aggcaaatgtttgagatcactatacaagccgcagttggttcaaaggttatcgcaagggaa 88866 Query: 323 ac 324 || Sbjct: 88865 ac 88864
>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence Length = 108135 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Minus Query: 330 cagcaatgagaaagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaaga 389 |||| |||||||| || ||||| |||||||| || ||||||||||| || || || |||| Sbjct: 61325 cagctatgagaaaaaatgttcttgccaagtgttacggtggtgatattactcgaaagaaga 61266 Query: 390 agctgctagagaagcagaaggaagggaagaagcgcatgaaacgtgttggatccgtcgata 449 |||| | |||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 61265 agcttttggagaagcaaaaggaagggaaaaagcgaatgaaacgtgttggttccgttgatg 61206 Query: 450 ttccccaagaggcattcca 468 | || ||||| |||||||| Sbjct: 61205 taccacaagaagcattcca 61187
>dbj|AP006425.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39B10, TM0315, complete sequence Length = 121336 Score = 97.6 bits (49), Expect = 4e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 332 gcaatgagaaagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaag 391 ||||||||||| || ||||| |||||||| |||||||||||||| || || |||| |||| Sbjct: 23329 gcaatgagaaaaaatgttcttgccaagtgttatggtggtgatattactcgaaaaaggaag 23388 Query: 392 ctgctagagaagcagaaggaagggaagaagcgcatgaaacgtgttggatccgtcgatatt 451 || | ||||| || |||||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 23389 ctattggagaaacaaaaggaaggaaagaagcgaatgaagcgtgttggttctgttgatata 23448 Query: 452 ccccaagaggcattcca 468 || ||||| |||||||| Sbjct: 23449 ccacaagaagcattcca 23465
>gb|BT020455.1| Arabidopsis thaliana At5g39900 mRNA, complete cds Length = 1992 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 242 aagctcaagaaatttatagaaaggcaaatgtttgagatcactatacaagcagcaattggt 301 ||||| ||||| | |||||| |||||||||||||| | | |||||||| || |||||| Sbjct: 1744 aagcttaagaactatatagagaggcaaatgtttgaagtaatgatacaagctgctattggt 1803 Query: 302 tcaaaggttattgcaagggaaactctgtcagcaatgagaaagaacgttctggccaagtgc 361 |||||| | |||||||| || || | || || ||||||||||| ||||| || || || Sbjct: 1804 tcaaagatcattgcaagagacacaatctcggcgatgagaaagaatgttcttgcaaaatgt 1863 Query: 362 tatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaagggaagaag 421 ||||| || ||||| || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 1864 tatggaggagatataactcggaagaagaagcttctagagaaacagaaagaagggaagaaa 1923 Query: 422 cgcatgaaacgtgttggatccgtcgatattcc 453 | |||||||| ||||| || || |||||||| Sbjct: 1924 agaatgaaacgagttggttctgttgatattcc 1955 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 26 aagtaccgattacctttgagggagatcattgtggacttctacaatgagttgaaaagcata 85 ||||||| ||||| |||||||| || | ||||| |||||| ||||||||||||||||| Sbjct: 1528 aagtaccagttaccattgagggaaatagtagtggatttctacgatgagttgaaaagcata 1587 Query: 86 acatctggctatgctacttttgactatgaagattctgagtatcaaaaatctgatct 141 ||||| || |||||| |||||||||| || ||| | ||||| ||| ||||||||| Sbjct: 1588 acatcaggttatgcttcttttgactacgaggatgcggagtaccaagcatctgatct 1643
>ref|NM_123353.3| Arabidopsis thaliana GTP binding / translation elongation factor AT5G39900 mRNA, complete cds Length = 2240 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 242 aagctcaagaaatttatagaaaggcaaatgtttgagatcactatacaagcagcaattggt 301 ||||| ||||| | |||||| |||||||||||||| | | |||||||| || |||||| Sbjct: 1820 aagcttaagaactatatagagaggcaaatgtttgaagtaatgatacaagctgctattggt 1879 Query: 302 tcaaaggttattgcaagggaaactctgtcagcaatgagaaagaacgttctggccaagtgc 361 |||||| | |||||||| || || | || || ||||||||||| ||||| || || || Sbjct: 1880 tcaaagatcattgcaagagacacaatctcggcgatgagaaagaatgttcttgcaaaatgt 1939 Query: 362 tatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaagggaagaag 421 ||||| || ||||| || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 1940 tatggaggagatataactcggaagaagaagcttctagagaaacagaaagaagggaagaaa 1999 Query: 422 cgcatgaaacgtgttggatccgtcgatattcc 453 | |||||||| ||||| || || |||||||| Sbjct: 2000 agaatgaaacgagttggttctgttgatattcc 2031 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 26 aagtaccgattacctttgagggagatcattgtggacttctacaatgagttgaaaagcata 85 ||||||| ||||| |||||||| || | ||||| |||||| ||||||||||||||||| Sbjct: 1604 aagtaccagttaccattgagggaaatagtagtggatttctacgatgagttgaaaagcata 1663 Query: 86 acatctggctatgctacttttgactatgaagattctgagtatcaaaaatctgatct 141 ||||| || |||||| |||||||||| || ||| | ||||| ||| ||||||||| Sbjct: 1664 acatcaggttatgcttcttttgactacgaggatgcggagtaccaagcatctgatct 1719
>gb|BT020385.1| Arabidopsis thaliana At5g39900 mRNA, complete cds Length = 2196 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 242 aagctcaagaaatttatagaaaggcaaatgtttgagatcactatacaagcagcaattggt 301 ||||| ||||| | |||||| |||||||||||||| | | |||||||| || |||||| Sbjct: 1820 aagcttaagaactatatagagaggcaaatgtttgaagtaatgatacaagctgctattggt 1879 Query: 302 tcaaaggttattgcaagggaaactctgtcagcaatgagaaagaacgttctggccaagtgc 361 |||||| | |||||||| || || | || || ||||||||||| ||||| || || || Sbjct: 1880 tcaaagatcattgcaagagacacaatctcggcgatgagaaagaatgttcttgcaaaatgt 1939 Query: 362 tatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaagggaagaag 421 ||||| || ||||| || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 1940 tatggaggagatataactcggaagaagaagcttctagagaaacagaaagaagggaagaaa 1999 Query: 422 cgcatgaaacgtgttggatccgtcgatattcc 453 | |||||||| ||||| || || |||||||| Sbjct: 2000 agaatgaaacgagttggttctgttgatattcc 2031 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 26 aagtaccgattacctttgagggagatcattgtggacttctacaatgagttgaaaagcata 85 ||||||| ||||| |||||||| || | ||||| |||||| ||||||||||||||||| Sbjct: 1604 aagtaccagttaccattgagggaaatagtagtggatttctacgatgagttgaaaagcata 1663 Query: 86 acatctggctatgctacttttgactatgaagattctgagtatcaaaaatctgatct 141 ||||| || |||||| |||||||||| || ||| | ||||| ||| ||||||||| Sbjct: 1664 acatcaggttatgcttcttttgactacgaggatgcggagtaccaagcatctgatct 1719
>dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH19 Length = 77380 Score = 95.6 bits (48), Expect = 1e-16 Identities = 171/212 (80%) Strand = Plus / Minus Query: 242 aagctcaagaaatttatagaaaggcaaatgtttgagatcactatacaagcagcaattggt 301 ||||| ||||| | |||||| |||||||||||||| | | |||||||| || |||||| Sbjct: 29551 aagcttaagaactatatagagaggcaaatgtttgaagtaatgatacaagctgctattggt 29492 Query: 302 tcaaaggttattgcaagggaaactctgtcagcaatgagaaagaacgttctggccaagtgc 361 |||||| | |||||||| || || | || || ||||||||||| ||||| || || || Sbjct: 29491 tcaaagatcattgcaagagacacaatctcggcgatgagaaagaatgttcttgcaaaatgt 29432 Query: 362 tatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaagggaagaag 421 ||||| || ||||| || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 29431 tatggaggagatataactcggaagaagaagcttctagagaaacagaaagaagggaagaaa 29372 Query: 422 cgcatgaaacgtgttggatccgtcgatattcc 453 | |||||||| ||||| || || |||||||| Sbjct: 29371 agaatgaaacgagttggttctgttgatattcc 29340 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 26 aagtaccgattacctttgagggagatcattgtggacttctacaatgagttgaaaagcata 85 ||||||| ||||| |||||||| || | ||||| |||||| ||||||||||||||||| Sbjct: 29767 aagtaccagttaccattgagggaaatagtagtggatttctacgatgagttgaaaagcata 29708 Query: 86 acatctggctatgctacttttgactatgaagattctgagtatcaaaaatctgatct 141 ||||| || |||||| |||||||||| || ||| | ||||| ||| ||||||||| Sbjct: 29707 acatcaggttatgcttcttttgactacgaggatgcggagtaccaagcatctgatct 29652
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| |||||||||||||| || || || |||| |||||| |||||||| || ||| Sbjct: 1114999 aagaacgtgctggccaagtgctacggcggcgacatcagccgcaagaagaagcttctcgag 1115058 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 ||||||||||| || |||||||||||||| Sbjct: 1115059 aagcagaaggagggcaagaagcgcatgaa 1115087
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 338 agaaagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgcta 397 ||||||||||| |||||||||||||| ||||| || ||| ||| || ||||||||||| Sbjct: 4576593 agaaagaacgtactggccaagtgctacggtggcgacgtcagccgtaagaagaagctgctg 4576534 Query: 398 gagaagcagaaggaagggaagaagcgcatgaaac 431 ||||||||||||| || ||||| |||||||||| Sbjct: 4576533 gagaagcagaaggccggtaagaaacgcatgaaac 4576500
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 338 agaaagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgcta 397 ||||||||||| |||||||||||||| || ||||| ||| ||| || ||||||||||| Sbjct: 1632887 agaaagaacgtactggccaagtgctacggcggtgacgtcagccgtaagaagaagctgctg 1632946 Query: 398 gagaagcagaaggaagggaagaagcgcatgaaac 431 ||||||||||||| || ||||| |||||||||| Sbjct: 1632947 gagaagcagaaggccggtaagaaacgcatgaaac 1632980 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 342 agaacgttctggccaagtgcta 363 |||||||||||||||||||||| Sbjct: 559131 agaacgttctggccaagtgcta 559152
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| |||||||||||||||||||| || | | ||||| || |||||||| ||| Sbjct: 1555082 aagaacgtgctggccaagtgctatggtggcgacgtttcgcgcaagaaaaagctgctggag 1555141 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||||||| ||||| |||||||| Sbjct: 1555142 aagcagaaggaaggcaagaaacgcatgaa 1555170
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||| |||||||| || ||||||||||| ||||| || || || Sbjct: 1045842 aagaacgtcctggccaagtgttatggtggcgacatcacccgcaagaagaaacttctcgaa 1045901 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||| |||||||| ||||| Sbjct: 1045902 aagcagaaagaaggcaagaagcgtatgaa 1045930 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||| |||||||| || ||||||||||| ||||| || || || Sbjct: 902810 aagaacgtcctggccaagtgttatggtggcgacatcacccgcaagaagaaacttctcgaa 902869 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||| |||||||| ||||| Sbjct: 902870 aagcagaaagaaggcaagaagcgtatgaa 902898
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||| || |||||| | ||||| |||||| |||| || Sbjct: 140336 aagaacgtgctggccaagtgctatggcggcgatatctcgcgcaagaagaagttgctggaa 140277 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||| || |||||||||||||| Sbjct: 140276 aagcagaaggccggcaagaagcgcatgaa 140248
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||| || |||||| | ||||| |||||| |||| || Sbjct: 76829 aagaacgtgctggccaagtgctatggcggcgatatctcgcgcaagaagaagttgctggaa 76770 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||| || |||||||||||||| Sbjct: 76769 aagcagaaggccggcaagaagcgcatgaa 76741
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||| || |||||| | ||||| |||||| |||| || Sbjct: 143472 aagaacgtgctggccaagtgctatggcggcgatatctcgcgcaagaagaagttgctggaa 143413 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||| || |||||||||||||| Sbjct: 143412 aagcagaaggccggcaagaagcgcatgaa 143384
>gb|AF188620.1|AF188620 Bordetella pertussis lep operon, complete sequence Length = 3459 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||| || |||||| | ||||| |||||| |||| || Sbjct: 1978 aagaacgtgctggccaagtgctatggcggcgatatctcgcgcaagaagaagttgctggaa 2037 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||| || |||||||||||||| Sbjct: 2038 aagcagaaggccggcaagaagcgcatgaa 2066
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||| || ||||||| |||||| || |||||||| || Sbjct: 2487073 aagaacgtgctggccaagtgctatggcggcgatatcagccgcaagaaaaagctgctcgaa 2487014 Query: 401 aagcagaagg 410 |||||||||| Sbjct: 2487013 aagcagaagg 2487004
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||| || || |||| |||||| || |||||||| || Sbjct: 2943062 aagaacgtgctggccaagtgctatggcggcgacatcagccgcaagaaaaagctgctcgaa 2943121 Query: 401 aagcagaaggaagggaagaagcgcatgaaa 430 |||||||| |||| || |||||||||||| Sbjct: 2943122 aagcagaaaaaaggcaaaaagcgcatgaaa 2943151
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| || |||||||||||||| || || ||| | ||||| ||||||||||| || Sbjct: 3296531 aagaacgtgctcgccaagtgctatggcggggacatctcgcgcaagaagaagctgctcgaa 3296590 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 ||||||||||| || |||||||| ||||| Sbjct: 3296591 aagcagaaggagggcaagaagcggatgaa 3296619
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 353 gccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaa 412 ||||||||||| || ||||| ||| ||||||| ||||||||| ||||||||||||||| Sbjct: 40805 gccaagtgctacggcggtgacatctcccgcaagcggaagctgctggagaagcagaaggaa 40746 Query: 413 gggaagaagcgcatgaa 429 || |||||||| ||||| Sbjct: 40745 ggcaagaagcggatgaa 40729
>gb|AE011763.1| Xanthomonas axonopodis pv. citri str. 306, section 141 of 469 of the complete genome Length = 9995 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| |||||||||||||||||||| || | | ||||| ||||||||||| || Sbjct: 9762 aagaacgtgctggccaagtgctatggtggcgacgtttcgcgcaagaagaagctgctggaa 9821 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||| ||||| |||||||| Sbjct: 9822 aagcagaaagaaggcaagaaacgcatgaa 9850
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 345 acgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagc 404 |||| |||||||||||||| || || || |||||||||| ||||||||| ||||||| Sbjct: 521709 acgtgctggccaagtgctacggcggcgacgtcacccgcaagcggaagctgctggagaagc 521768 Query: 405 agaaggaagggaagaagcgcatgaa 429 |||||||||| |||||||| ||||| Sbjct: 521769 agaaggaaggcaagaagcggatgaa 521793
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||| |||||||| || || || ||||| ||||| ||||| ||||| || Sbjct: 567653 aagaacgtgctggcgaagtgctacggcggcgacatcacgcgcaagaagaaactgctcgaa 567712 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||||||| ||||| || ||||| Sbjct: 567713 aagcagaaggaaggcaagaaacgaatgaa 567741
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||| |||||||| || || || ||||| ||||| ||||| ||||| || Sbjct: 3207117 aagaacgtgctggcgaagtgctacggcggcgacatcacgcgcaagaagaaactgctcgaa 3207058 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||||||| ||||| || ||||| Sbjct: 3207057 aagcagaaggaaggcaagaaacgaatgaa 3207029
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| |||||||| ||||| || || ||||||| ||| || ||||||||||| || Sbjct: 2629917 aagaacgtgctggccaaatgctacggcggcgatatcagccggaagaagaagctgctggaa 2629858 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| | ||| |||||||| ||||| Sbjct: 2629857 aagcagaaagcaggcaagaagcggatgaa 2629829
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 389 aagctgctagagaagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 983074 aagctgctggagaagcagaaggaaggcaagaagcgcatgaa 983114
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||| |||||||| || || || ||||| ||||| ||||| ||||| || Sbjct: 2936983 aagaacgtgctggcgaagtgctacggcggcgacatcacgcgcaagaagaaactgctcgaa 2936924 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||||||| ||||| || ||||| Sbjct: 2936923 aagcagaaggaaggcaagaaacgaatgaa 2936895
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||||| || | | ||||| || |||||||| || Sbjct: 1934071 aagaacgtgttggccaagtgctatggtggcgacgtttcgcgcaagaaaaagctgctggaa 1934130 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||| |||||||||||||| Sbjct: 1934131 aagcagaaagaaggcaagaagcgcatgaa 1934159
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 353 gccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaa 412 ||||||||||| || ||||| |||| |||||| |||||||| ||||||||||||||| Sbjct: 1572458 gccaagtgctacggcggtgacatcagccgcaagcgcaagctgctcgagaagcagaaggaa 1572517 Query: 413 gggaagaagcgcatgaa 429 || |||||||| ||||| Sbjct: 1572518 ggcaagaagcggatgaa 1572534
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||||| || | | ||||| || |||||||| || Sbjct: 1956096 aagaacgtgttggccaagtgctatggtggcgacgtttcgcgcaagaaaaagctgctggaa 1956155 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||| |||||||||||||| Sbjct: 1956156 aagcagaaagaaggcaagaagcgcatgaa 1956184
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 354 ccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaag 413 |||||||||| || || || ||||| |||||| |||||||| |||||||||||||||| Sbjct: 2698778 ccaagtgctacggcggcgacatcacgcgcaaacgcaagctgctggagaagcagaaggaag 2698719 Query: 414 ggaagaagcgcatgaa 429 | |||||||| ||||| Sbjct: 2698718 gcaagaagcggatgaa 2698703
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 345 acgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagc 404 |||| ||||| ||||||||||| || || ||||||||||| ||||||||||| || |||| Sbjct: 1728411 acgtgctggcaaagtgctatggcggcgacatcacccgcaagaagaagctgctcgaaaagc 1728470 Query: 405 agaa 408 |||| Sbjct: 1728471 agaa 1728474
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 354 ccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaag 413 |||||||||| || || || ||||| |||||| |||||||| |||||||||||||||| Sbjct: 276608 ccaagtgctacggcggcgacatcacgcgcaaacgcaagctgctggagaagcagaaggaag 276549 Query: 414 ggaagaagcgcatgaa 429 | |||||||| ||||| Sbjct: 276548 gcaagaagcggatgaa 276533
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 354 ccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaag 413 |||||||||| || || || ||||| |||||| |||||||| |||||||||||||||| Sbjct: 158516 ccaagtgctacggcggcgacatcacgcgcaaacgcaagctgctggagaagcagaaggaag 158457 Query: 414 ggaagaagcgcatgaa 429 | |||||||| ||||| Sbjct: 158456 gcaagaagcggatgaa 158441
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 352 ggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaagga 411 |||||||||||||||||| |||||| |||| || |||||||| || |||||||| || Sbjct: 1317402 ggccaagtgctatggtggcgatatctcccgtaagcgtaagctgctcgaaaagcagaaaga 1317461 Query: 412 agggaagaagcgcatgaa 429 ||| ||||| |||||||| Sbjct: 1317462 aggaaagaaacgcatgaa 1317479
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| || |||||||| || || ||||| |||| ||||||| ||||| || ||| Sbjct: 1655848 aagaacgtgcttgccaagtgttacggcggtgacatcagccgcaaacgcaagcttctcgag 1655789 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| || || |||||||||||||| Sbjct: 1655788 aagcagaaagagggcaagaagcgcatgaa 1655760
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 389 aagctgctagagaagcagaaggaagggaagaagcgcatgaa 429 |||||||| || |||||||||||||| |||||||||||||| Sbjct: 698773 aagctgctggaaaagcagaaggaaggcaagaagcgcatgaa 698813
>gb|AE012226.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 134 of 460 of the complete genome Length = 11922 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||| ||||||||||| || | | ||||| || |||||||| || Sbjct: 8746 aagaacgtgttggccaaatgctatggtggcgacgtttcgcgcaagaaaaagctgctggaa 8805 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||| |||||||||||||| Sbjct: 8806 aagcagaaagaaggcaagaagcgcatgaa 8834
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 353 gccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaag 409 |||||||||||||| || || ||||||||||| |||||||| || || ||||||||| Sbjct: 2792117 gccaagtgctatggcggcgacatcacccgcaagaagaagcttctggaaaagcagaag 2792061
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 353 gccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaa 412 ||||||||||| || || || ||||||||||| |||||||| |||||||||||||| Sbjct: 1508255 gccaagtgctacggcggcgacatcacccgcaagcgcaagctgctcgagaagcagaaggag 1508314 Query: 413 gggaagaagcgcatgaa 429 || |||||||| ||||| Sbjct: 1508315 ggcaagaagcggatgaa 1508331
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 353 gccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaa 412 |||||||| ||||| || || ||||||||||| || |||||||| ||||||||||| || Sbjct: 3880121 gccaagtgttatggcggcgacatcacccgcaagaaaaagctgctggagaagcagaaagag 3880180 Query: 413 gggaagaag 421 || |||||| Sbjct: 3880181 ggcaagaag 3880189
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||| ||||||||||| || | | ||||| || |||||||| || Sbjct: 3554798 aagaacgtgttggccaaatgctatggtggcgacgtttcgcgcaagaaaaagctgctggaa 3554739 Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||| |||||||||||||| Sbjct: 3554738 aagcagaaagaaggcaagaagcgcatgaa 3554710
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 353 gccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaa 412 ||||||||||| || ||||| ||| |||| || ||||||||| |||||||||||||| Sbjct: 6726782 gccaagtgctacggcggtgacatctcccgtaagcggaagctgctggagaagcagaaggag 6726841 Query: 413 gggaagaagcgcatgaa 429 || |||||||| ||||| Sbjct: 6726842 ggcaagaagcggatgaa 6726858
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 379 ccgcaaaaagaagctgctagagaagcagaaggaagggaagaagcgcatgaaac 431 |||||| ||||||||||| ||| |||||||||| || ||||| |||||||||| Sbjct: 550355 ccgcaagaagaagctgctggaggagcagaaggagggcaagaaacgcatgaaac 550407
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 388 gaagctgctagagaagcagaaggaagggaagaagcgcatg 427 |||||| || ||||||||||||||||| |||||||||||| Sbjct: 4268534 gaagcttctggagaagcagaaggaaggcaagaagcgcatg 4268573
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| ||||||||||||||||| || || ||||| || || || |||||||| || Sbjct: 2252246 aagaacgtgctggccaagtgctatggcggcgacatcacgcgtaagaaaaagctgctggaa 2252305 Query: 401 aagcagaaggaagggaagaagcgcatgaaac 431 || || |||| || |||||||| ||||||| Sbjct: 2252306 aaacaaaaggccggcaagaagcggatgaaac 2252336
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 338 agaaagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgcta 397 ||||||||||| ||||||||||||| || || || ||| ||| || || || ||||| Sbjct: 1155089 agaaagaacgtattggccaagtgctacggcggcgacgtcagccgtaagaaaaaactgctt 1155148 Query: 398 gagaagcagaaggaagggaagaagcgcatgaaac 431 ||||||||||||| || ||||| |||||||||| Sbjct: 1155149 gagaagcagaaggccggtaagaaacgcatgaaac 1155182 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 342 agaacgttctggccaagtgcta 363 |||||||||||||||||||||| Sbjct: 5697170 agaacgttctggccaagtgcta 5697149
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 353 gccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcag 406 |||||||||||||| ||||||||| |||| || ||||| ||||| |||||||| Sbjct: 228428 gccaagtgctatggcggtgatatctcccgtaagaagaaactgctgaagaagcag 228375
>emb|BX248359.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 6/8 Length = 349895 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 392 ctgctagagaagcagaaggaagggaagaagcgcatgaa 429 |||||||| |||||||| ||||| |||||||||||||| Sbjct: 73914 ctgctagaaaagcagaaagaaggcaagaagcgcatgaa 73877
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 344 aacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaag 403 ||||| ||||||||||| || || ||||| ||||||| ||| |||||| || |||||| Sbjct: 606503 aacgtcctggccaagtgttacggcggtgacgtcacccggaaacggaagctcctggagaag 606562 Query: 404 cagaaggaagggaagaagcgcatgaa 429 || |||||||| || ||||| ||||| Sbjct: 606563 caaaaggaaggcaaaaagcggatgaa 606588
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 353 gccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaa 412 |||||||| ||||| || || ||||||||||| ||| || || || |||||||||||| Sbjct: 1982226 gccaagtgttatggcggcgacatcacccgcaagcggaaactcctcgaaaagcagaaggaa 1982285 Query: 413 gggaagaagcgcatgaa 429 |||||||| || ||||| Sbjct: 1982286 gggaagaaacggatgaa 1982302
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 345 acgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagc 404 ||||||| || |||||||| || || || ||||||||||| |||||||| ||||||| Sbjct: 1524218 acgttctcgcgaagtgctacggcggcgacatcacccgcaagcgcaagctgctcgagaagc 1524159 Query: 405 agaaggaagggaagaagcgcatgaa 429 |||| || || |||||||| ||||| Sbjct: 1524158 agaaagagggcaagaagcggatgaa 1524134
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 389 aagctgctagagaagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||||||||||| || |||||||||||||| Sbjct: 983186 aagctgcttgagaagcagaaggctggtaagaagcgcatgaa 983226
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||||||||| |||||||||||||| Sbjct: 257914 aagcagaaggaaggcaagaagcgcatgaa 257942
>gb|AE005781.1| Caulobacter crescentus CB15 section 107 of 359 of the complete genome Length = 10898 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 379 ccgcaaaaagaagctgctagagaagcagaaggaagggaagaagcg 423 |||||| |||||||| || ||||| ||||||||||| |||||||| Sbjct: 4594 ccgcaagaagaagcttctggagaaacagaaggaaggcaagaagcg 4550
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 389 aagctgctagagaagcagaaggaagggaagaagcgcatgaa 429 ||||| || |||||||||||||| || |||||||||||||| Sbjct: 1855001 aagctcctcgagaagcagaaggagggcaagaagcgcatgaa 1855041
>emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete genome; segment 3/10 Length = 312050 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 362 tatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaagggaagaag 421 ||||| || ||||||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 56504 tatggcggcgatatcacccgcaaacgtaagcttctggaaaagcagaaggaaggcaagaaa 56563 Query: 422 cgcatgaa 429 || ||||| Sbjct: 56564 cggatgaa 56571
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 48.1 bits (24), Expect = 0.031 Identities = 63/76 (82%) Strand = Plus / Minus Query: 352 ggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaagga 411 ||||||||||||||| || || ||||||||| || ||||| || ||||||||||| Sbjct: 260947 ggccaagtgctatggcggcgacgccacccgcaagcgcaaactgctcgacaagcagaagga 260888 Query: 412 agggaagaagcgcatg 427 ||| |||||||||||| Sbjct: 260887 aggcaagaagcgcatg 260872
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 282 ctatacaagcagcaattggttcaaaggttattgcaagggaaact 325 |||||||||||||| | |||||||| || || |||||||||||| Sbjct: 2166033 ctatacaagcagcagtaggttcaaaagtaatagcaagggaaact 2165990
>gb|U00016.1|U00016 Mycobacterium leprae cosmid B1937 Length = 42931 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 362 tatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaagggaagaag 421 ||||| || ||||||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 11322 tatggcggcgatatcacccgcaaacgtaagcttctggaaaagcagaaggaaggcaagaaa 11381 Query: 422 cgcatgaa 429 || ||||| Sbjct: 11382 cggatgaa 11389
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 aagcagaaggaagggaagaagcgcatg 427 |||||||||||||| |||||||||||| Sbjct: 1024472 aagcagaaggaaggcaagaagcgcatg 1024446
>gb|AE013060.1| Thermoanaerobacter tengcongensis MB4, section 87 of 244 of the complete genome Length = 11119 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Plus Query: 336 tgagaaagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgc 395 |||| ||||| || ||||| ||||||||||| ||||| |||| || || || ||||| Sbjct: 9756 tgaggaagaatgtgctggcgaagtgctatggcggtgacgtcacgcgaaagaaaaagcttt 9815 Query: 396 tagagaagcagaaggaagg 414 | ||||||||||||||||| Sbjct: 9816 tggagaagcagaaggaagg 9834
>ref|XM_736451.1| Plasmodium chabaudi chabaudi GTP-binding protein (PC000753.03.0) partial mRNA Length = 954 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 gccaagtgctatggtggtgatat 375 ||||||||||||||||||||||| Sbjct: 811 gccaagtgctatggtggtgatat 833
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 351 tggccaagtgctatggtggtgatatcacccgcaaa 385 ||||||||||||||||||| || ||||||||||| Sbjct: 288666 tggccaagtgctatggtggcgacgtcacccgcaaa 288700
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Minus Query: 347 gttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcag 406 ||||| |||||||| || || ||||||||| |||| || ||||| || ||||||||| Sbjct: 2387748 gttctagccaagtgttacggcggtgatatctcccgtaagcgcaagctcctggagaagcag 2387689 Query: 407 aaggaagggaagaagcgcatgaa 429 |||| || |||||||||||||| Sbjct: 2387688 aaggccggtaagaagcgcatgaa 2387666
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 aagcagaaggaagggaagaagcgcatg 427 |||||||||||||| |||||||||||| Sbjct: 257218 aagcagaaggaaggcaagaagcgcatg 257244
>gb|AE017308.1| Mycoplasma mobile 163K complete genome Length = 777079 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 287 caagcagcaattggttcaaaggttattgcaagggaaac 324 ||||||||||||||| |||| || |||||||| ||||| Sbjct: 505143 caagcagcaattggtgcaaaagtaattgcaagagaaac 505180
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 401 aagcagaaggaagggaagaagcgcatgaaa 430 |||||||||||||| |||||||| |||||| Sbjct: 1379075 aagcagaaggaaggaaagaagcggatgaaa 1379104
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Minus Query: 356 aagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaaggaaggg 415 |||||||| || || ||| ||| |||||| | ||||| || ||||||||||||||||| Sbjct: 384275 aagtgctacggcggcgatgtcagccgcaagagaaagcttctggagaagcagaaggaaggc 384216 Query: 416 aagaag 421 |||||| Sbjct: 384215 aagaag 384210
>gb|BC036768.1| Homo sapiens GUF1 GTPase homolog (S. cerevisiae), mRNA (cDNA clone MGC:46045 IMAGE:5744283), complete cds Length = 2350 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 aacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagct 393 |||||| |||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 2023 aacgttttggcaaaatgttatggtggtgatattacccgaaaaatgaagct 2072
>gb|BC012338.1| Homo sapiens GUF1 GTPase homolog (S. cerevisiae), mRNA (cDNA clone MGC:19877 IMAGE:4554249), complete cds Length = 2473 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 aacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagct 393 |||||| |||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 2021 aacgttttggcaaaatgttatggtggtgatattacccgaaaaatgaagct 2070
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.48 Identities = 67/82 (81%) Strand = Plus / Minus Query: 386 aagaagctgctagagaagcagaaggaagggaagaagcgcatgaaacgtgttggatccgtc 445 ||||||||||| || ||||| |||| ||| || ||||| ||||| | || ||||| ||| Sbjct: 3696883 aagaagctgctggaaaagcaaaaggcaggcaaaaagcgaatgaagcaggtgggatcggtc 3696824 Query: 446 gatattccccaagaggcattcc 467 || ||||| |||||||| |||| Sbjct: 3696823 gagattccgcaagaggctttcc 3696802
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Minus Query: 344 aacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaag 403 ||||| ||||||||||| ||||||||||| ||| ||| || ||||| ||| | |||| Sbjct: 3684801 aacgtactggccaagtgttatggtggtgacgtcagccgtaagaagaaactgttgcagaaa 3684742 Query: 404 cagaaggaagggaagaagcgcatgaa 429 ||||| || || |||||||| ||||| Sbjct: 3684741 cagaaagacggtaagaagcgtatgaa 3684716
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 342 agaacgttctggccaagtgcta 363 |||||||||||||||||||||| Sbjct: 6354092 agaacgttctggccaagtgcta 6354071
>dbj|AK001607.1| Homo sapiens cDNA FLJ10745 fis, clone NT2RP3001676 Length = 2288 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 aacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagct 393 |||||| |||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 135 aacgttttggcaaaatgttatggtggtgatattacccgaaaaatgaagct 184
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 389 aagctgctagagaagcagaaggaagggaag 418 |||||||| || |||||||||||||||||| Sbjct: 783888 aagctgctcgaaaagcagaaggaagggaag 783917
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 0.48 Identities = 58/70 (82%) Strand = Plus / Minus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| || ||||||||||| || || || || || ||||| ||||||||||| || Sbjct: 2180858 aagaacgtgctcgccaagtgctacggcggcgacattacgcgcaagaagaagctgctcgaa 2180799 Query: 401 aagcagaagg 410 || ||||||| Sbjct: 2180798 aaacagaagg 2180789
>dbj|AK025248.1| Homo sapiens cDNA: FLJ21595 fis, clone COL07069 Length = 3013 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 aacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagct 393 |||||| |||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 842 aacgttttggcaaaatgttatggtggtgatattacccgaaaaatgaagct 891
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.48 Identities = 61/74 (82%) Strand = Plus / Plus Query: 341 aagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagag 400 |||||||| || || |||||||| || || || ||||| || || ||||| ||||| || Sbjct: 1937511 aagaacgtgctcgcgaagtgctacggcggcgacatcacgcgtaagaagaaactgctcgaa 1937570 Query: 401 aagcagaaggaagg 414 |||||||||||||| Sbjct: 1937571 aagcagaaggaagg 1937584
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 401 aagcagaaggaagggaagaagcgcatgaa 429 |||||||| ||||| |||||||||||||| Sbjct: 3309750 aagcagaaagaaggtaagaagcgcatgaa 3309722
>gb|AC007279.4| Homo sapiens BAC clone RP11-309N8 from 2, complete sequence Length = 138270 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 agcagaaggaagggaagaagc 422 ||||||||||||||||||||| Sbjct: 88635 agcagaaggaagggaagaagc 88655
>gb|AE004841.1| Pseudomonas aeruginosa PAO1, section 402 of 529 of the complete genome Length = 15733 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 agaacgttctggccaagtgctatgg 366 ||||||| ||||||||||||||||| Sbjct: 7608 agaacgtcctggccaagtgctatgg 7584
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Minus Query: 336 tgagaaagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgc 395 |||| ||| |||| || ||||||||||| || || || | ||||| || |||||||| Sbjct: 707269 tgaggaaggacgtcctcgccaagtgctacggcggggacgtgacccggaagaagaagcttt 707210 Query: 396 tagagaagcagaaggaagggaagaagcgc 424 | |||||||||||||| || ||||||||| Sbjct: 707209 tggagaagcagaaggagggcaagaagcgc 707181
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 389 aagctgctagagaagcagaaggaagggaagaag 421 ||||| || ||||||||||||||||| |||||| Sbjct: 8949556 aagcttctggagaagcagaaggaaggcaagaag 8949588
>emb|BX647242.1|HSM807386 Homo sapiens mRNA; cDNA DKFZp686M0649 (from clone DKFZp686M0649) Length = 6219 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 344 aacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagc 392 |||||| |||| || || |||||||||||||| ||||| |||| ||||| Sbjct: 1737 aacgttttggcaaaatgttatggtggtgatattacccgaaaaatgaagc 1785
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 393 tgctagagaagcagaaggaagggaagaagcgcatgaa 429 |||| ||||| |||||||||||||| ||||| ||||| Sbjct: 545247 tgctggagaaacagaaggaagggaaaaagcgaatgaa 545211
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Minus Query: 336 tgagaaagaacgttctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgc 395 |||| ||| |||| || ||||||||||| || || || | ||||| || |||||||| Sbjct: 377943 tgaggaaggacgtcctcgccaagtgctacggcggggacgtgacccggaagaagaagcttt 377884 Query: 396 tagagaagcagaaggaagggaagaagcgc 424 | |||||||||||||| || ||||||||| Sbjct: 377883 tggagaagcagaaggagggcaagaagcgc 377855
>emb|AL732486.9| Mouse DNA sequence from clone RP23-90B3 on chromosome X, complete sequence Length = 252977 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tctgtcagcaatgagaaagaa 345 ||||||||||||||||||||| Sbjct: 219005 tctgtcagcaatgagaaagaa 219025
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aatttatagaaaggcaaatg 271 |||||||||||||||||||| Sbjct: 1046179 aatttatagaaaggcaaatg 1046160
>gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, complete sequence Length = 155784 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gaagcagaaggaagggaaga 419 |||||||||||||||||||| Sbjct: 9986 gaagcagaaggaagggaaga 9967
>gb|AC102354.14| Mus musculus chromosome 17, clone RP23-80J17, complete sequence Length = 117703 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tcactatacaagcagcaatt 298 |||||||||||||||||||| Sbjct: 59737 tcactatacaagcagcaatt 59718
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence Length = 211002 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gagaagcagaaggaagggaagaag 421 |||||| ||||||||||||||||| Sbjct: 187875 gagaaggagaaggaagggaagaag 187852
>ref|XM_600742.2| PREDICTED: Bos taurus similar to CG32527-PB, isoform B, transcript variant 1 (LOC522459), mRNA Length = 3336 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 362 tatggtggtgatatcacccgcaaaaagaagct 393 |||||||||||||| ||||| |||| |||||| Sbjct: 1519 tatggtggtgatattacccgaaaaatgaagct 1550
>ref|XM_872916.1| PREDICTED: Bos taurus similar to CG32527-PB, isoform B, transcript variant 3 (LOC522459), mRNA Length = 2810 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 362 tatggtggtgatatcacccgcaaaaagaagct 393 |||||||||||||| ||||| |||| |||||| Sbjct: 993 tatggtggtgatattacccgaaaaatgaagct 1024
>ref|XM_872815.1| PREDICTED: Bos taurus similar to CG32527-PB, isoform B, transcript variant 2 (LOC522459), mRNA Length = 2876 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 362 tatggtggtgatatcacccgcaaaaagaagct 393 |||||||||||||| ||||| |||| |||||| Sbjct: 1059 tatggtggtgatattacccgaaaaatgaagct 1090
>gb|AC069279.6| Homo sapiens BAC clone CTD-2031I8 from 7, complete sequence Length = 103898 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 aagcagaaggaagggaagaa 420 |||||||||||||||||||| Sbjct: 58155 aagcagaaggaagggaagaa 58136
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence Length = 178757 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gagaagcagaaggaagggaagaag 421 |||||| ||||||||||||||||| Sbjct: 85735 gagaaggagaaggaagggaagaag 85712
>gb|AC122192.4| Mus musculus BAC clone RP23-45B2 from 14, complete sequence Length = 178698 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 agaagcagaaggaagggaagaagc 422 |||||||||||| ||||||||||| Sbjct: 112776 agaagcagaagggagggaagaagc 112753
>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence Length = 236182 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gaagcagaaggaagggaaga 419 |||||||||||||||||||| Sbjct: 33821 gaagcagaaggaagggaaga 33840
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gagaagcagaaggaagggaagaag 421 ||||||||||||||||| |||||| Sbjct: 482324 gagaagcagaaggaaggcaagaag 482301
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 266 caaatgtttgagatcactatacaagcagcaattggt 301 ||||||||||| ||| |||||||||| || |||||| Sbjct: 4340052 caaatgtttgatatcgctatacaagccgctattggt 4340017
>emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chromosome 11 Contains the Ppm1d gene for magnesium-dependent protein phosphatase 1D delta isoform, the 5' end of the Bcas3 gene for breast carcinoma amplified sequence 3 and a CpG island, complete sequence Length = 130030 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 actcaaggtctccagttcaa 494 |||||||||||||||||||| Sbjct: 76158 actcaaggtctccagttcaa 76139
>gb|AC011266.8| Homo sapiens chromosome 18, clone RP11-5A1, complete sequence Length = 167191 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 aaaaagaagctgctagagaa 402 |||||||||||||||||||| Sbjct: 8380 aaaaagaagctgctagagaa 8399
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gagaagcagaaggaagggaagaag 421 ||||||||||||||||| |||||| Sbjct: 642022 gagaagcagaaggaaggcaagaag 641999
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.5 Identities = 65/80 (81%) Strand = Plus / Minus Query: 350 ctggccaagtgctatggtggtgatatcacccgcaaaaagaagctgctagagaagcagaag 409 ||||||||||||||||| || ||| | |||||||| |||||| | || || || ||| Sbjct: 593012 ctggccaagtgctatgggggggatgtgacccgcaagcgcaagctgttggaaaaacaaaag 592953 Query: 410 gaagggaagaagcgcatgaa 429 || ||||| ||||||||||| Sbjct: 592952 gaggggaaaaagcgcatgaa 592933
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 351 tggccaagtgctatggtggtgatatcacccgcaaaaagaagctg 394 ||||||||||||| || || ||||||| |||||| || |||||| Sbjct: 1158797 tggccaagtgctacggcggcgatatcagccgcaagaaaaagctg 1158840
>gb|AF436381.1| Glossosoma nigrior 18S small subunit ribosomal RNA gene, partial sequence Length = 538 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 gttcaaagtaaacagccgta 508 |||||||||||||||||||| Sbjct: 186 gttcaaagtaaacagccgta 167
>gb|AC103562.6| Homo sapiens BAC clone RP11-608O21 from 4, complete sequence Length = 147301 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gcctcagtgtacctggaagg 541 |||||||||||||||||||| Sbjct: 115837 gcctcagtgtacctggaagg 115856
>gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, complete sequence Length = 160151 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 caagaaatttatagaaaggcaaat 270 ||||||||||||||||||| |||| Sbjct: 108379 caagaaatttatagaaaggaaaat 108402
>gb|AC096586.3| Homo sapiens chromosome 4 clone RP11-700J17, complete sequence Length = 175517 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 362 tatggtggtgatatcacccgcaaaaagaagct 393 |||||||||||||| ||||| |||| |||||| Sbjct: 116589 tatggtggtgatattacccgaaaaatgaagct 116558
>dbj|AB179285.1| Macaca fascicularis testis cDNA clone: QtsA-16809, similar to human hypothetical protein FLJ13220 (FLJ13220), mRNA, RefSeq: NM_021927.1 Length = 1864 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 362 tatggtggtgatatcacccgcaaaaagaagct 393 |||||||||||||| ||||| |||| |||||| Sbjct: 1656 tatggtggtgatattacccgaaaaatgaagct 1687
>dbj|AK046348.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230374E05 product:unclassifiable, full insert sequence Length = 2835 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 cagaaggttggaagagaattagtg 238 |||||||||||||| ||||||||| Sbjct: 496 cagaaggttggaagtgaattagtg 519
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 aagggaaactctgtcagcaa 335 |||||||||||||||||||| Sbjct: 132978 aagggaaactctgtcagcaa 132959 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 aagggaaactctgtcagcaa 335 |||||||||||||||||||| Sbjct: 94922 aagggaaactctgtcagcaa 94903
>dbj|AP001104.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-755I3, complete sequence Length = 179727 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gctatgctacttttgactat 112 |||||||||||||||||||| Sbjct: 14308 gctatgctacttttgactat 14289
>dbj|AK116681.1| Ciona intestinalis cDNA, clone:cieg003m17, full insert sequence Length = 2551 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 87 catctggctatgctacttttgactatgaagat 118 ||||||| ||||| | |||||||||||||||| Sbjct: 1594 catctgggtatgcaagttttgactatgaagat 1625
>gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, complete sequence Length = 189288 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gagaagcagaaggaagggaa 417 |||||||||||||||||||| Sbjct: 59346 gagaagcagaaggaagggaa 59327
>emb|CT010501.6| Mouse DNA sequence from clone RP23-333D13 on chromosome 17, complete sequence Length = 207346 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tcactatacaagcagcaatt 298 |||||||||||||||||||| Sbjct: 8368 tcactatacaagcagcaatt 8349
>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete sequence Length = 186404 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gagaagcagaaggaagggaagaag 421 |||||| ||||||||||||||||| Sbjct: 70111 gagaaggagaaggaagggaagaag 70088
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 351 tggccaagtgctatggtggtgatatcacccgcaaaaagaagctg 394 ||||||||||||| || || ||||||| |||||| || |||||| Sbjct: 462083 tggccaagtgctacggcggcgatatcagccgcaagaaaaagctg 462040
>dbj|AP001372.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-702H23, complete sequences Length = 120700 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gctatgctacttttgactat 112 |||||||||||||||||||| Sbjct: 112540 gctatgctacttttgactat 112521 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,236,845 Number of Sequences: 3902068 Number of extensions: 5236845 Number of successful extensions: 110533 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 109727 Number of HSP's gapped (non-prelim): 787 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
