>SLIK5_HUMAN (O94991) SLIT and NTRK-like protein 5 precursor (Leucine-rich|
           repeat-containing protein 11)
          Length = 958

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 375 HDGILHQSPNHHVLLSRHPYRPWTTPAGS*NPGLSLRIGRKNQ*QGHHLATPA 217
           H+  +  S NHH+   + P  P   P     P L L+ G + + + HHL +PA
Sbjct: 780 HELKVTYSSNHHLQQQQQPPPPPQQPQQQPPPQLQLQPGEEERRESHHLRSPA 832

>LMO6_MOUSE (Q80VL3) LIM domain only protein 6 (Triple LIM domain protein 6)|
          Length = 624

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -1

Query: 543 HQRRRICHRRMTSHHAHHRTSGH 475
           H+RRR  HRR  SHH HH    H
Sbjct: 516 HRRRRQRHRRRGSHHHHHHPGRH 538

>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:|
            Endostatin]
          Length = 1774

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 12/76 (15%)
 Frame = +1

Query: 442  REDQTVRHPPAVAAR-PMVGVVARHPSVTDPPP----LVNAHRHT-------VVAVARPL 585
            R D  + +PP +  R P  GV   H S    PP    L  AH H        +VA+  PL
Sbjct: 1550 RADDILANPPRLPDRQPYPGVPHHHSSYVHLPPARPTLSLAHTHQDFQPVLHLVALNTPL 1609

Query: 586  AAGTEASVGACFTCGQ 633
            + G     GA F C Q
Sbjct: 1610 SGGMRGIRGADFQCFQ 1625

>PRM2_RATFU (Q91VE1) Protamine-2 (Protamine-P2) (Sperm histone P2)|
          Length = 105

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/80 (27%), Positives = 29/80 (36%)
 Frame = -1

Query: 615 RAH*SFCPCCQRTSHRDHRMTMSVHQRRRICHRRMTSHHAHHRTSGHRWGMTNGLIFXXX 436
           R H     C ++  HR       +H+RRR C RR      H R   HR G          
Sbjct: 45  RGHHRHRRCSRKRLHR-------IHKRRRSCRRRRRHSCCHRRR--HRRGCRR------- 88

Query: 435 XXXXXXXXKCRCQVCWSSCH 376
                   +C+C+ C   CH
Sbjct: 89  ---SRRRRRCKCRKCRRHCH 105

>PKN1_COREF (Q8FUI5) Probable serine/threonine protein kinase CE0033 (EC|
           2.7.11.1)
          Length = 660

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 22/72 (30%), Positives = 35/72 (48%)
 Frame = +3

Query: 33  PRSVTGFLSDVSPSAADAVGKIYLIADERVQGAVFDLPEEIAKDLLTMELPPGNTLSKVT 212
           P   + ++SD+SP+AA  V  + L A  +     +    E+A DL   EL   N +S+  
Sbjct: 231 PTPPSEYISDLSPTAALNVDAVVLTAMAKHPADRYQTAAEMAADL---ELLSRNAVSRAA 287

Query: 213 KLPVLQDDGPAT 248
           +  V + D P T
Sbjct: 288 RAHVEKPDEPET 299

>DBNL_HUMAN (Q9UJU6) Drebrin-like protein (SH3 domain-containing protein 7)|
           (Drebrin F) (Cervical SH3P7) (HPK1-interacting protein
           of 55 kDa) (HIP-55) (Cervical mucin-associated protein)
          Length = 430

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 20/69 (28%), Positives = 29/69 (42%)
 Frame = +1

Query: 358 MKDSVVVAGAPADLTTTFGQMMTFQVVVREDQTVRHPPAVAARPMVGVVARHPSVTDPPP 537
           M  + + +  P  L + F Q    Q+   E    R P A  +RP   + A  P+ + PP 
Sbjct: 268 MSTTSISSPQPGKLRSPFLQK---QLTQPETHFGREPAAAISRPRADLPAEEPAPSTPPC 324

Query: 538 LVNAHRHTV 564
           LV A    V
Sbjct: 325 LVQAEEEAV 333


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,414,849
Number of Sequences: 219361
Number of extensions: 1489384
Number of successful extensions: 5636
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5611
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)