>B3GT6_MOUSE (Q91Z92) Beta-1,3-galactosyltransferase 6 (EC 2.4.1.134) (Beta|
           3GalT6) (Galactosylxylosylprotein
           3-beta-galactosyltransferase) (UDP-Gal:betaGal beta
           1,3-galactosyltransferase polypeptide 6)
           (Galactosyltransferase II) (GAG GalTII)
          Length = 325

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 27/85 (31%), Positives = 42/85 (49%)
 Frame = +2

Query: 299 PVTSETSQPRKKAFVVVGVNTAFSSRKRRDSVRETWMPQGEKLLQLEEQKGIVIRFTIGH 478
           P  S  ++PR KAF+ V V +A  + +RR +VR TW+    +       + +  RF +G 
Sbjct: 39  PSASGAARPRAKAFLAVLVASAPRAVERRTAVRSTWLAPERR----GGPEDVWARFAVG- 93

Query: 479 SATSNSILDKAIXAXDAQHHDXLRL 553
           +    S   +A+    AQH D L L
Sbjct: 94  TGGLGSEERRALELEQAQHGDLLLL 118

>GYRB_TREPA (O08399) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 637

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
 Frame = +2

Query: 215 QLLDKSISTLQMELAAKRSTLELVRS------GVP---VTSETSQPRK-KAFVVVGVNTA 364
           ++L+KSI+  Q  LAA+R+     R       G+P          P K + ++V G +  
Sbjct: 374 KILEKSIAEAQARLAARRAKEAARRKSGMDSFGLPGKLADCSLKDPAKCEVYIVEGDSAG 433

Query: 365 FSSRKRRDSVRETWMPQGEKLLQLEEQK 448
            S++K RDS  +  +P   K+L +E+ +
Sbjct: 434 GSAKKGRDSKTQAILPLWGKMLNVEKTR 461

>DCUP_RAT (P32362) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)|
           (Fragment)
          Length = 364

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 25/121 (20%)
 Frame = +2

Query: 176 YIMGEVTRTHEAIQLLDKSISTLQMELAAK------RSTLELVRSGVPVTSETSQPR--- 328
           Y++G+V    +A+QL +     L  EL +K      R   + V++G+     T  P    
Sbjct: 199 YLIGQVAAGAQALQLFESHAGHLGSELFSKFALPYIRDVAKRVKAGLQKAGLTRMPMIIF 258

Query: 329 ------------KKAFVVVGVNTAFSSRKRRDSVRETWMPQGE----KLLQLEEQKGIVI 460
                       +  + VVG++   + +K R+ V +T   QGE     L   EE+ G ++
Sbjct: 259 AKDGHFALEELAQAGYEVVGLDWTVAPKKAREPVGKTVTLQGELDPCALYASEEEIGRLV 318

Query: 461 R 463
           +
Sbjct: 319 Q 319

>NOLC1_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)|
           (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar
           and coiled-body phosphoprotein 1)
          Length = 699

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 305 TSETSQPRKKAFVVVGVNTAFSSRKRRDSVRETWMPQGEKL 427
           + E  + +KKA VVV  + +   RK+ ++ +E   PQ +K+
Sbjct: 563 SEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKI 603

>MTAL3_KLULA (Q9HDS6) Mating-type protein ALPHA3 (MATalpha3 protein) (HMLalpha3|
           protein)
          Length = 897

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 31  GLGMLFTNRFWTAPNANNHIMSQRRRQDQELQLVSEDCNTKRKHE 165
           G G +F  R WT    N  I+    +QD+  Q++   CN K+ H+
Sbjct: 158 GTGYIFV-RGWTGYRVNTIILKCHCKQDKCHQILKPRCNVKKHHD 201

>ARGA_PASMU (Q9CMJ6) Amino-acid acetyltransferase (EC 2.3.1.1)|
           (N-acetylglutamate synthase) (AGS) (NAGS)
          Length = 440

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/72 (26%), Positives = 35/72 (48%)
 Frame = +2

Query: 83  TTSCPNAGDKIRSCNLCQRIAIQRGSMRGTRYIMGEVTRTHEAIQLLDKSISTLQMELAA 262
           T +CPN  + I   +L   + I+   + G RY + E+ + H+   +  K+I    +    
Sbjct: 33  TIACPNFVNIINDISLLHSLGIKLVLVFGARYQINELLQQHQIESVYHKNIRITDL---- 88

Query: 263 KRSTLELVRSGV 298
             ++LELV+  V
Sbjct: 89  --TSLELVKQAV 98

>MUKB_PHOLL (Q7N6B7) Chromosome partition protein mukB (Structural maintenance of|
            chromosome-related protein)
          Length = 1482

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/84 (25%), Positives = 36/84 (42%)
 Frame = +2

Query: 194  TRTHEAIQLLDKSISTLQMELAAKRSTLELVRSGVPVTSETSQPRKKAFVVVGVNTAFSS 373
            +R  E ++      S     LA+ +S+ E  +    +  E  Q  K+  V    N    +
Sbjct: 1001 SRAREQLRQQQAQYSQFNQVLASLKSSYETKQD---MLKELHQEMKEIGVRADANAEMRA 1057

Query: 374  RKRRDSVRETWMPQGEKLLQLEEQ 445
            R+RRD + E       ++ QLE+Q
Sbjct: 1058 RERRDQLHEALSANRSRVNQLEKQ 1081

>THII_METMA (Q8PU39) Probable thiamine biosynthesis protein thiI|
          Length = 405

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = +2

Query: 311 ETSQPRKKA-----FVVVGVNTAFSSRKRRDSVRETWMPQGEKLLQLEEQKGIVIRFTIG 475
           ET+ PR        F VV  ++A  ++   DS  ET    G+K++Q  E   I  R +  
Sbjct: 71  ETTDPRAAGAAADVFGVVSTSSALITKPELDSAAETCAFLGKKIIQEGESFAIRARRSGN 130

Query: 476 HSATSNSI 499
           HS +S  I
Sbjct: 131 HSFSSADI 138


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,033,958
Number of Sequences: 219361
Number of extensions: 1531710
Number of successful extensions: 4678
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4677
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)