ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5p17 |
|---|---|
| Clone Library Name | barley_pub |
>KNAT3_ARATH (P48000) Homeobox protein knotted-1-like 3 (KNAT3)| Length = 431 Score = 203 bits (516), Expect = 3e-52 Identities = 96/126 (76%), Positives = 108/126 (85%) Frame = +3 Query: 3 GTRILTEGERSLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWW 182 G I TE ERSL+ERVR ELK ELKQGYKEK+VDIREEI+RKRRAGKLPGDT + LKAWW Sbjct: 304 GPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWW 363 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTG 362 Q+HSKWPYPTE+DKARLVQETGLQLKQINNWFINQRKRNWHS+ ++S+ K K+K N Sbjct: 364 QSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRKSNAGD 423 Query: 363 NDGAEQ 380 N G E+ Sbjct: 424 NSGRER 429
>KNAT4_ARATH (P48001) Homeobox protein knotted-1-like 4 (KNAT4)| Length = 393 Score = 200 bits (508), Expect = 3e-51 Identities = 92/126 (73%), Positives = 108/126 (85%) Frame = +3 Query: 3 GTRILTEGERSLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWW 182 G + TE ERSL+ERVR ELK ELKQGYKEK+VDIREEI+RKRRAGKLPGDT + LK+WW Sbjct: 268 GPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWW 327 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTG 362 Q+HSKWPYPTE+DKARLVQETGLQLKQINNWFINQRKRNWHS+ ++S+ K K++ N Sbjct: 328 QSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRRSNAGE 387 Query: 363 NDGAEQ 380 N G ++ Sbjct: 388 NSGRDR 393
>KNAP3_MALDO (O04136) Homeobox protein knotted-1-like 3 (KNAP3)| Length = 427 Score = 197 bits (502), Expect = 1e-50 Identities = 93/116 (80%), Positives = 104/116 (89%) Frame = +3 Query: 3 GTRILTEGERSLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWW 182 G I TE ERSL+ERVR ELK ELKQGYKEK+VDIREEI+RKRRAGKLPGDT + LKAWW Sbjct: 312 GPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWW 371 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKR 350 Q+HSKWPYPTE+DKARLVQETGLQLKQINNWFINQRKRNWHS+ + S+ K+K+KR Sbjct: 372 QSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR 427
>LET12_LYCES (O22300) Homeobox protein knotted-1-like LET12| Length = 426 Score = 196 bits (499), Expect = 3e-50 Identities = 91/113 (80%), Positives = 103/113 (91%) Frame = +3 Query: 3 GTRILTEGERSLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWW 182 G + TE ERSL+ERVR ELK ELKQGYKEK+VDIREEI+RKRRAGKLPGDT + LKAWW Sbjct: 309 GPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWW 368 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTK 341 Q+HSKWPYPTE+DKARLVQETGLQLKQINNWFINQRKRNWHS+ + SSS+K++ Sbjct: 369 QSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSSSQKSQ 421
>KNAT5_ARATH (P48002) Homeobox protein knotted-1-like 5 (KNAT5)| (Homeodomain-containing protein 1) Length = 383 Score = 189 bits (481), Expect = 4e-48 Identities = 91/120 (75%), Positives = 104/120 (86%) Frame = +3 Query: 3 GTRILTEGERSLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWW 182 G + TE ERSL+ERV+ ELK ELKQG+KEK+VDIREEIMRKRRAGKLPGDT + LK WW Sbjct: 263 GPLVPTERERSLMERVKKELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWW 322 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTG 362 + HSKWPYPTE+DKA+LVQETGLQLKQINNWFINQRKRNW +SN+++SS TK KR TG Sbjct: 323 RTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNW-NSNSSTSSTLTKNKRKRTG 381
>HD1_BRANA (P46606) Homeobox protein HD1| Length = 294 Score = 181 bits (460), Expect = 1e-45 Identities = 83/115 (72%), Positives = 98/115 (85%) Frame = +3 Query: 3 GTRILTEGERSLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWW 182 G + TE ERSL+ERVR ELK ELKQG+K ++ D+REEIMRKRRAGKLPGDT LK WW Sbjct: 179 GPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWW 238 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKK 347 Q H KWPYPTEDDKA+LV+ETGLQLKQINNWFINQRKRNWH+++ + +S K+K+K Sbjct: 239 QQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRK 293
>KNOX7_MAIZE (P56665) Homeobox protein knotted-1-like 7 (Fragment)| Length = 85 Score = 176 bits (446), Expect = 4e-44 Identities = 81/85 (95%), Positives = 84/85 (98%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK+ELKQGYKEKLVDIREEIMRKRRAGKLPGDTA+ LKAWWQAHSKWPYPTEDDKARLV Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 QETGLQLKQINNWFINQRKRNWHS+ Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>KNOX6_MAIZE (P56664) Homeobox protein knotted-1-like 6 (Fragment)| Length = 85 Score = 176 bits (446), Expect = 4e-44 Identities = 81/85 (95%), Positives = 84/85 (98%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK+ELKQGYKEKLVDIREEIMRKRRAGKLPGDTA+ LKAWWQAHSKWPYPTEDDKARLV Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 QETGLQLKQINNWFINQRKRNWHS+ Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>KNOX2_MAIZE (P56660) Homeobox protein knotted-1-like 2 (Fragment)| Length = 88 Score = 174 bits (442), Expect = 1e-43 Identities = 79/88 (89%), Positives = 86/88 (97%) Frame = +3 Query: 48 VRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKA 227 VR ELK ELKQGY++KLVDIREEI+RKRRAGKLPGDTA+TLKAWWQAHSKWPYPTE+DKA Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKA 60 Query: 228 RLVQETGLQLKQINNWFINQRKRNWHSS 311 RLVQETGLQLKQINNWFINQRKRNWH++ Sbjct: 61 RLVQETGLQLKQINNWFINQRKRNWHNN 88
>KNOX1_MAIZE (P56659) Homeobox protein knotted-1-like 1 (Fragment)| Length = 88 Score = 160 bits (404), Expect = 3e-39 Identities = 70/88 (79%), Positives = 80/88 (90%) Frame = +3 Query: 48 VRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKA 227 VR ELK ELKQG+K ++ D+REEI+RKRRAGKLPGDT + LK WWQ HSKWPYPTEDDKA Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKA 60 Query: 228 RLVQETGLQLKQINNWFINQRKRNWHSS 311 +LV+ETGLQLKQINNWFINQRKRNWH++ Sbjct: 61 KLVEETGLQLKQINNWFINQRKRNWHNN 88
>KNX11_MAIZE (P56668) Homeobox protein knotted-1-like 11 (Fragment)| Length = 88 Score = 104 bits (260), Expect = 2e-22 Identities = 47/85 (55%), Positives = 56/85 (65%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK L + Y L +R E ++KR+ GKLP D + L WW H +WPYPTE+DK RL Sbjct: 4 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 63 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 TGL KQINNWFINQRKR+W S Sbjct: 64 AATGLDPKQINNWFINQRKRHWKPS 88
>KNOX5_MAIZE (P56663) Homeobox protein knotted-1-like 5 (Fragment)| Length = 85 Score = 104 bits (259), Expect = 2e-22 Identities = 47/85 (55%), Positives = 56/85 (65%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK L + Y L +R E ++KR+ GKLP D + L WW H +WPYPTE+DK RL Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 60 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 TGL KQINNWFINQRKR+W S Sbjct: 61 AMTGLDPKQINNWFINQRKRHWKPS 85
>HLG3_MAIZE (P56669) Homeobox protein liguleless 3 (Fragment)| Length = 85 Score = 103 bits (258), Expect = 3e-22 Identities = 47/85 (55%), Positives = 55/85 (64%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK L + Y L +R E ++KR+ GKLP D L WW H +WPYPTE+DK RL Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLA 60 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 TGL KQINNWFINQRKR+W S Sbjct: 61 AMTGLDPKQINNWFINQRKRHWKPS 85
>OSH1_ORYSA (P46609) Homeobox protein OSH1| Length = 361 Score = 102 bits (255), Expect = 6e-22 Identities = 45/89 (50%), Positives = 58/89 (65%) Frame = +3 Query: 48 VRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKA 227 V ELK L + Y L +++E+ +K++ GKLP D L WW+ H KWPYP+E K Sbjct: 239 VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKV 298 Query: 228 RLVQETGLQLKQINNWFINQRKRNWHSSN 314 L + TGL LKQINNWFINQRKR+W S+ Sbjct: 299 ALAESTGLDLKQINNWFINQRKRHWKPSD 327
>KNAP2_MALDO (O04135) Homeobox protein knotted-1-like 2 (KNAP2)| Length = 397 Score = 102 bits (253), Expect = 1e-21 Identities = 43/85 (50%), Positives = 58/85 (68%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK+ L + Y L +++E+ +K++ GKLP D L +WW+ H KWPYP+E +K L Sbjct: 279 ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALA 338 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 339 ESTGLDQKQINNWFINQRKRHWKPS 363
>KN1_LYCES (Q41330) Homeotic protein knotted-1 (TKN1)| Length = 355 Score = 101 bits (251), Expect = 2e-21 Identities = 43/85 (50%), Positives = 57/85 (67%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK+ L + Y L +++E+ +K++ GKLP D L WW+ H KWPYP+E +K L Sbjct: 236 ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPSESEKVALA 295 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 296 ESTGLDQKQINNWFINQRKRHWKPS 320
>KNOX3_HORVU (Q43484) Homeobox protein KNOX3 (Hooded protein)| Length = 364 Score = 101 bits (251), Expect = 2e-21 Identities = 43/85 (50%), Positives = 57/85 (67%) Frame = +3 Query: 48 VRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKA 227 V ELK L + Y L +++E+ +K++ GKLP + L +WW+ H KWPYP+E K Sbjct: 243 VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSESQKV 302 Query: 228 RLVQETGLQLKQINNWFINQRKRNW 302 L + TGL LKQINNWFINQRKR+W Sbjct: 303 ALAESTGLDLKQINNWFINQRKRHW 327
>KN1_MAIZE (P24345) Homeotic protein knotted-1| Length = 359 Score = 100 bits (250), Expect = 2e-21 Identities = 44/88 (50%), Positives = 57/88 (64%) Frame = +3 Query: 48 VRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKA 227 V ELK L + Y L +++E+ +K++ GKLP + L +WW H KWPYP+E K Sbjct: 239 VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQKV 298 Query: 228 RLVQETGLQLKQINNWFINQRKRNWHSS 311 L + TGL LKQINNWFINQRKR+W S Sbjct: 299 ALAESTGLDLKQINNWFINQRKRHWKPS 326
>KNAP1_MALDO (O04134) Homeobox protein knotted-1-like 1 (KNAP1)| Length = 398 Score = 100 bits (249), Expect = 3e-21 Identities = 42/85 (49%), Positives = 58/85 (68%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK+ L + Y L +++E+ +K++ GKLP + L +WW+ H KWPYP+E +K L Sbjct: 280 ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALA 339 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 340 ESTGLDQKQINNWFINQRKRHWKPS 364
>STM_BRAOL (Q9M6D9) Homeobox protein Shootmeristemless| Length = 383 Score = 100 bits (248), Expect = 4e-21 Identities = 44/85 (51%), Positives = 55/85 (64%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK +L + Y L +++E M+KR+ GKLP + L WW H KWPYP+E K L Sbjct: 263 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALA 322 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 323 ESTGLDQKQINNWFINQRKRHWKPS 347
>KNAT1_ARATH (P46639) Homeobox protein knotted-1-like 1 (KNAT1)| Length = 398 Score = 100 bits (248), Expect = 4e-21 Identities = 42/85 (49%), Positives = 57/85 (67%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK+ L + Y L +++E+ +K++ GKLP + L WW+ H KWPYP+E +K L Sbjct: 279 ELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALA 338 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 339 ESTGLDQKQINNWFINQRKRHWKPS 363
>STM_ARATH (Q38874) Homeobox protein SHOOT MERISTEMLESS| Length = 382 Score = 100 bits (248), Expect = 4e-21 Identities = 44/85 (51%), Positives = 55/85 (64%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK +L + Y L +++E M+KR+ GKLP + L WW H KWPYP+E K L Sbjct: 262 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALA 321 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 322 ESTGLDQKQINNWFINQRKRHWKPS 346
>LET6_LYCES (O22299) Homeobox protein knotted-1-like LET6| Length = 355 Score = 99.4 bits (246), Expect = 6e-21 Identities = 44/85 (51%), Positives = 55/85 (64%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK +L + Y L +++E M+KR+ GKLP + L WW H KWPYP+E K L Sbjct: 237 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALA 296 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 297 ESTGLDQKQINNWFINQRKRHWKPS 321
>KNAT2_ARATH (P46640) Homeobox protein knotted-1-like 2 (KNAT2) (ATK1)| Length = 310 Score = 99.4 bits (246), Expect = 6e-21 Identities = 42/85 (49%), Positives = 56/85 (65%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 +LK +L + + + ++ E +K++ GKLP + L WW H+KWPYPTE DK L Sbjct: 208 DLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLA 267 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 +ETGL KQINNWFINQRKR+W S Sbjct: 268 EETGLDQKQINNWFINQRKRHWKPS 292
>HSBH1_SOYBN (P46608) Homeobox protein SBH1| Length = 379 Score = 99.4 bits (246), Expect = 6e-21 Identities = 43/85 (50%), Positives = 55/85 (64%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 +LK +L + Y L +++E M+KR+ GKLP + L WW H KWPYP+E K L Sbjct: 261 DLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALA 320 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 321 ESTGLDQKQINNWFINQRKRHWKPS 345
>RSH1_MAIZE (Q41853) Homeobox protein rough sheath 1| Length = 351 Score = 98.6 bits (244), Expect = 1e-20 Identities = 43/85 (50%), Positives = 56/85 (65%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK +L + Y L +R+E +K++ GKLP + L WW+ H KWPYP+E +K L Sbjct: 232 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALA 291 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 292 ESTGLDQKQINNWFINQRKRHWKPS 316
>KNX10_MAIZE (P56667) Homeobox protein knotted-1-like 10 (Fragment)| Length = 88 Score = 98.6 bits (244), Expect = 1e-20 Identities = 43/83 (51%), Positives = 56/83 (67%) Frame = +3 Query: 54 HELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARL 233 ++LK+ L Y L + E+ RK++ GKLP D L WWQ H +WPYP+E +KA L Sbjct: 3 NDLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAAL 62 Query: 234 VQETGLQLKQINNWFINQRKRNW 302 + TGL+ KQINNWFINQRKR+W Sbjct: 63 AESTGLEAKQINNWFINQRKRHW 85
>KNOX4_MAIZE (P56662) Homeobox protein knotted-1-like 4 (Fragment)| Length = 85 Score = 98.2 bits (243), Expect = 1e-20 Identities = 43/85 (50%), Positives = 56/85 (65%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK +L + Y L +R+E +K++ GKLP + L WW+ H KWPYP+E +K L Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALA 60 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL KQINNWFINQRKR+W S Sbjct: 61 EATGLDQKQINNWFINQRKRHWKPS 85
>KNOX3_MAIZE (P56661) Homeobox protein knotted-1-like 3 (Fragment)| Length = 88 Score = 97.8 bits (242), Expect = 2e-20 Identities = 42/85 (49%), Positives = 59/85 (69%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK +L + Y L ++R+E+ +KR+ KLP + L +WW+ H +WPYP+E +K L Sbjct: 4 ELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALA 63 Query: 237 QETGLQLKQINNWFINQRKRNWHSS 311 + TGL+ KQINNWFINQRKR+W S Sbjct: 64 ESTGLEQKQINNWFINQRKRHWKPS 88
>KNOX8_MAIZE (P56666) Homeobox protein knotted-1-like 8 (Fragment)| Length = 85 Score = 94.7 bits (234), Expect = 2e-19 Identities = 41/82 (50%), Positives = 55/82 (67%) Frame = +3 Query: 57 ELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ELK +L + Y L +R+E ++++ GKLP + L WW+ H KWPYP+E +K L Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALA 60 Query: 237 QETGLQLKQINNWFINQRKRNW 302 + TGL KQINNWFINQRKR+W Sbjct: 61 ETTGLDPKQINNWFINQRKRHW 82
>PKNX1_MOUSE (O70477) Homeobox protein PKNOX1 (PBX/knotted homeobox 1)| Length = 435 Score = 68.6 bits (166), Expect = 1e-11 Identities = 33/93 (35%), Positives = 49/93 (52%) Frame = +3 Query: 108 REEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQ 287 +E+ K + G LP +++W H PYPTED+K ++ +T L L Q+NNWFIN Sbjct: 253 QEDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINA 312 Query: 288 RKRNWHSSNTASSSEKTKKKRNVTGNDGAEQSW 386 R+R +S SE K K+ N ++ W Sbjct: 313 RRRILQPMLDSSCSETPKTKKKPAQNRPVQRFW 345
>PKNX1_HUMAN (P55347) Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox| protein PREP-1) Length = 435 Score = 68.6 bits (166), Expect = 1e-11 Identities = 32/87 (36%), Positives = 46/87 (52%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWH 305 K + G LP +++W H PYPTED+K ++ +T L L Q+NNWFIN R+R Sbjct: 259 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQ 318 Query: 306 SSNTASSSEKTKKKRNVTGNDGAEQSW 386 +S SE K K+ N ++ W Sbjct: 319 PMLDSSCSETPKTKKKTAQNRPVQRFW 345
>MEIS3_HUMAN (Q99687) Homeobox protein Meis3 (Meis1-related protein 2)| Length = 375 Score = 63.5 bits (153), Expect = 4e-10 Identities = 27/65 (41%), Positives = 40/65 (61%) Frame = +3 Query: 102 DIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFI 281 D+ +E R ++ G P ++AW H PYP+E+ K +L Q+TGL + Q+NNWFI Sbjct: 255 DLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFI 314 Query: 282 NQRKR 296 N R+R Sbjct: 315 NARRR 319
>PKNX2_HUMAN (Q96KN3) Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox| protein PREP-2) Length = 460 Score = 62.8 bits (151), Expect = 7e-10 Identities = 29/82 (35%), Positives = 44/82 (53%) Frame = +3 Query: 111 EEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQR 290 E+ K + G LP +++W H PYPTED+K ++ +T L L Q+NNWFIN R Sbjct: 272 EDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINAR 331 Query: 291 KRNWHSSNTASSSEKTKKKRNV 356 +R AS+ + K + + Sbjct: 332 RRILQPMLDASNPDPAPKAKKI 353
>MEIS3_MOUSE (P97368) Homeobox protein Meis3 (Meis1-related protein 2)| Length = 378 Score = 61.6 bits (148), Expect = 1e-09 Identities = 27/65 (41%), Positives = 39/65 (60%) Frame = +3 Query: 102 DIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFI 281 D+ E R ++ G P ++AW H PYP+E+ K +L Q+TGL + Q+NNWFI Sbjct: 258 DLDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFI 317 Query: 282 NQRKR 296 N R+R Sbjct: 318 NARRR 322
>MEIS2_MOUSE (P97367) Homeobox protein Meis2 (Meis1-related protein 1)| Length = 477 Score = 60.1 bits (144), Expect = 4e-09 Identities = 25/58 (43%), Positives = 37/58 (63%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 R+++ G P ++AW H PYP+E+ K +L Q+TGL + Q+NNWFIN R+R Sbjct: 276 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
>MEIS2_HUMAN (O14770) Homeobox protein Meis2 (Meis1-related protein 1)| Length = 477 Score = 60.1 bits (144), Expect = 4e-09 Identities = 25/58 (43%), Positives = 37/58 (63%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 R+++ G P ++AW H PYP+E+ K +L Q+TGL + Q+NNWFIN R+R Sbjct: 276 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
>MEIS1_XENLA (P79937) Homeobox protein Meis1 (XMeis1)| Length = 390 Score = 59.3 bits (142), Expect = 7e-09 Identities = 27/65 (41%), Positives = 38/65 (58%) Frame = +3 Query: 102 DIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFI 281 D +E R + G P ++AW H PYP+E+ K +L Q+TGL + Q+NNWFI Sbjct: 265 DPDKEKKRNKGRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFI 324 Query: 282 NQRKR 296 N R+R Sbjct: 325 NARRR 329
>MEIS1_MOUSE (Q60954) Homeobox protein Meis1 (Myeloid ecotropic viral| integration site 1) Length = 390 Score = 59.3 bits (142), Expect = 7e-09 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 R ++ G P ++AW H PYP+E+ K +L Q+TGL + Q+NNWFIN R+R Sbjct: 272 RHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
>MEIS1_HUMAN (O00470) Homeobox protein Meis1| Length = 390 Score = 59.3 bits (142), Expect = 7e-09 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 R ++ G P ++AW H PYP+E+ K +L Q+TGL + Q+NNWFIN R+R Sbjct: 272 RHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
>TF2LX_PANTR (Q8MIB7) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 241 Score = 58.9 bits (141), Expect = 1e-08 Identities = 25/58 (43%), Positives = 37/58 (63%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G LP ++ L+ W H YP+E++K L ++T L L QI+NWFIN R+R Sbjct: 50 KKKRKGNLPAESVKVLRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRR 107
>TF2LX_HUMAN (Q8IUE1) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 241 Score = 58.5 bits (140), Expect = 1e-08 Identities = 25/58 (43%), Positives = 37/58 (63%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G LP ++ L+ W H YP+E++K L ++T L L QI+NWFIN R+R Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRR 107
>TF2LX_GORGO (Q8MIE9) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 241 Score = 58.5 bits (140), Expect = 1e-08 Identities = 25/58 (43%), Positives = 37/58 (63%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G LP ++ L+ W H YP+E++K L ++T L L QI+NWFIN R+R Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRR 107
>HD2_ENCCU (Q8SR09) Homeobox protein HD-2 (EcHD-2)| Length = 192 Score = 58.2 bits (139), Expect = 2e-08 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Frame = +3 Query: 36 LIERVRHELKSELKQGYKEKLVDIREEIMRK----RRAGKLPGDTAATLKAWWQAHSKWP 203 +I V+ ++ G E + I+ E K R P DT+ L++W + + P Sbjct: 89 IIGCVKSITSEPIRVGTVEAVRPIQHEAEHKCAKPRTRANFPMDTSQLLRSWLKENMDNP 148 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKR 296 YP++ +KA L Q+TGL QINNWFIN R+R Sbjct: 149 YPSDAEKAYLCQKTGLGPAQINNWFINARRR 179
>TF2LY_HUMAN (Q8IUE0) Homeobox protein TGIF2LY (TGFB-induced factor 2-like| protein, Y-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the Y) Length = 185 Score = 57.0 bits (136), Expect = 4e-08 Identities = 24/58 (41%), Positives = 37/58 (63%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G LP ++ L+ W H YP+E++K L ++T L L +I+NWFIN R+R Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRR 107
>TF2LX_PAPHA (Q8MIC2) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 256 Score = 57.0 bits (136), Expect = 4e-08 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G LP ++ L+ W H YP+E +K L ++T L L QI+NWFIN R+R Sbjct: 64 KKKRKGYLPAESVKILRRWMYKHRFRAYPSEAEKRMLSKKTNLSLSQISNWFINARRR 121
>TF2LX_PONPY (Q8MIB8) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 241 Score = 56.6 bits (135), Expect = 5e-08 Identities = 24/58 (41%), Positives = 36/58 (62%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G LP + L+ W H YP+E++K L ++T L L Q++NWFIN R+R Sbjct: 50 KKKRHGNLPAKSVKILRDWMYKHRFRAYPSEEEKQMLSEKTNLSLLQVSNWFINARRR 107
>TF2LX_MIOTA (Q8MID1) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 249 Score = 56.6 bits (135), Expect = 5e-08 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G LP ++ L+ W H YP+E +K L ++T L L QI+NWFIN R+R Sbjct: 57 KKKRKGYLPAESVKILRDWMYKHRFRAYPSEAEKRMLSKKTNLSLSQISNWFINARRR 114
>TF2LX_MACFA (Q8MID8) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 249 Score = 56.6 bits (135), Expect = 5e-08 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G LP ++ L+ W H YP+E +K L ++T L L QI+NWFIN R+R Sbjct: 57 KKKRKGYLPAESVKILRDWMYKHRFRAYPSEAEKRMLSKKTNLSLSQISNWFINARRR 114
>TF2LX_HYLLA (Q8MIE6) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 241 Score = 55.1 bits (131), Expect = 1e-07 Identities = 24/57 (42%), Positives = 35/57 (61%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 K+ G LP ++ L+ W H YP+E++K L ++T L L QI+NWFIN R+R Sbjct: 51 KKPKGYLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLSQISNWFINARRR 107
>TGIF_PANTR (Q5IS58) 5'-TG-3'-interacting factor (Homeobox protein TGIF)| Length = 401 Score = 55.1 bits (131), Expect = 1e-07 Identities = 25/58 (43%), Positives = 35/58 (60%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++RR G LP ++ L+ W H YP+E +KA L Q+T L Q+ NWFIN R+R Sbjct: 164 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 221
>TGIF_HUMAN (Q15583) 5'-TG-3'-interacting factor (Homeobox protein TGIF)| Length = 401 Score = 55.1 bits (131), Expect = 1e-07 Identities = 25/58 (43%), Positives = 35/58 (60%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++RR G LP ++ L+ W H YP+E +KA L Q+T L Q+ NWFIN R+R Sbjct: 164 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 221
>TGIF_MOUSE (P70284) 5'-TG-3'-interacting factor (Homeobox protein TGIF)| Length = 272 Score = 55.1 bits (131), Expect = 1e-07 Identities = 25/58 (43%), Positives = 35/58 (60%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++RR G LP ++ L+ W H YP+E +KA L Q+T L Q+ NWFIN R+R Sbjct: 35 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92
>CUP9_YEAST (P41817) Homeobox protein CUP9| Length = 306 Score = 54.3 bits (129), Expect = 2e-07 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Frame = +3 Query: 105 IREEIMRKRRAGK---LPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNW 275 + + RK+ +G+ LP +T L W H PYPT+ +K L+ +TGL Q++NW Sbjct: 153 VESKSRRKQNSGRRSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNW 212 Query: 276 FINQRKR 296 FIN R+R Sbjct: 213 FINVRRR 219
>TF2LX_MACMU (Q8MID6) Homeobox protein TGIF2LX (TGFB-induced factor 2-like| protein, X-linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF-like on the X) Length = 249 Score = 54.3 bits (129), Expect = 2e-07 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +K+R G P ++ L+ W H YP+E +K L ++T L L QI+NWFIN R+R Sbjct: 57 KKKRKGYSPAESVKILRDWMYKHRFRAYPSEAEKRMLSKKTNLSLSQISNWFINARRR 114
>TOS8_YEAST (P53147) Homeobox protein TOS8 (Target of SBF 8)| Length = 276 Score = 54.3 bits (129), Expect = 2e-07 Identities = 26/70 (37%), Positives = 37/70 (52%) Frame = +3 Query: 132 RAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSS 311 + LP T + L W H PYPT +K L+ +TGL QI+NWFIN R+R S Sbjct: 197 KRSNLPKATVSILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRKIFSG 256 Query: 312 NTASSSEKTK 341 +++ + K Sbjct: 257 QNDANNFRRK 266
>HD12_ENCCU (Q8SRR1) Homeobox protein HD-12 (EcHD-12)| Length = 193 Score = 53.9 bits (128), Expect = 3e-07 Identities = 22/50 (44%), Positives = 34/50 (68%) Frame = +3 Query: 147 PGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 P + + L+ W + H +PYP++ +K L +ETGL+L QI+NWF N R+R Sbjct: 131 PKEISKILRKWLKKHLTYPYPSKIEKKMLSKETGLKLSQIDNWFANARRR 180
>IRX2_MOUSE (P81066) Iroquois-class homeodomain protein IRX-2 (Iroquois| homeobox protein 2) (Homeodomain protein IRXA2) Length = 474 Score = 53.5 bits (127), Expect = 4e-07 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 14/91 (15%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-------NWHSS 311 D ATLKAW H K PYPT+ +K L T + L Q++ WF N R+R W Sbjct: 125 DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR 184 Query: 312 NTASSSE-------KTKKKRNVTGNDGAEQS 383 N + + ++K++ + DG E S Sbjct: 185 NKSEDEDEDEGDASRSKEESSDKAQDGTETS 215
>IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Iroquois| homeobox protein 4) Length = 485 Score = 53.1 bits (126), Expect = 5e-07 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 7/68 (10%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-------NWHSS 311 +T +TLKAW Q H K PYPT+ +K L T + L Q++ WF N R+R W Sbjct: 151 ETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPR 210 Query: 312 NTASSSEK 335 N S ++ Sbjct: 211 NKCSDEKR 218
>IRX4_MOUSE (Q9QY61) Iroquois-class homeodomain protein IRX-4 (Iroquois| homeobox protein 4) (Homeodomain protein IRXA3) Length = 515 Score = 52.8 bits (125), Expect = 7e-07 Identities = 23/48 (47%), Positives = 31/48 (64%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +T +TLKAW Q H K PYPT+ +K L T + L Q++ WF N R+R Sbjct: 153 ETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 200
>IRX4_HUMAN (P78413) Iroquois-class homeodomain protein IRX-4 (Iroquois| homeobox protein 4) (Homeodomain protein IRXA3) Length = 519 Score = 52.8 bits (125), Expect = 7e-07 Identities = 23/48 (47%), Positives = 31/48 (64%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +T +TLKAW Q H K PYPT+ +K L T + L Q++ WF N R+R Sbjct: 152 ETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 199
>IRX5_HUMAN (P78411) Iroquois-class homeodomain protein IRX-5 (Iroquois| homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A) Length = 482 Score = 52.4 bits (124), Expect = 9e-07 Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-------NWHSS 311 D ATLKAW H K PYPT+ +K L T + L Q++ WF N R+R W Sbjct: 123 DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR 182 Query: 312 NTASSSEKTKKKRNVTGNDGAE 377 N S E+ ++ ++ ND E Sbjct: 183 N-RSEDEEEEENIDLEKNDEDE 203
>IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Iroquois| homeobox protein 3) (Homeodomain protein IRXB1) Length = 507 Score = 52.4 bits (124), Expect = 9e-07 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-NWHSSNTASSS 329 ++ +TLKAW H K PYPT+ +K L T + L Q++ WF N R+R + T + Sbjct: 140 ESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR 199 Query: 330 EKTKKKRNVTGNDGAEQ 380 +T ++ N G++ E+ Sbjct: 200 SRTDEEGNAYGSEREEE 216
>IRX5_MOUSE (Q9JKQ4) Iroquois-class homeodomain protein IRX-5 (Iroquois| homeobox protein 5) (Homeodomain protein IRXB2) Length = 484 Score = 52.4 bits (124), Expect = 9e-07 Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-------NWHSS 311 D ATLKAW H K PYPT+ +K L T + L Q++ WF N R+R W Sbjct: 122 DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR 181 Query: 312 NTASSSEKTKKKRNVTGNDGAE 377 N S E+ ++ ++ ND E Sbjct: 182 N-RSEDEEEEENIDLEKNDEDE 202
>IRX3_HUMAN (P78415) Iroquois-class homeodomain protein IRX-3 (Iroquois| homeobox protein 3) (Homeodomain protein IRXB1) Length = 501 Score = 52.4 bits (124), Expect = 9e-07 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-NWHSSNTASSS 329 ++ +TLKAW H K PYPT+ +K L T + L Q++ WF N R+R + T + Sbjct: 137 ESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR 196 Query: 330 EKTKKKRNVTGNDGAEQ 380 +T ++ N G++ E+ Sbjct: 197 SRTDEEGNAYGSEREEE 213
>ARA_DROME (Q24248) Homeobox protein araucan| Length = 717 Score = 52.0 bits (123), Expect = 1e-06 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 13/90 (14%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-------NWHSS 311 ++ ATLKAW H K PYPT+ +K L T + L Q++ WF N R+R W Sbjct: 265 ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPK 324 Query: 312 N------TASSSEKTKKKRNVTGNDGAEQS 383 N A S+ K K ++ + G++ S Sbjct: 325 NRTDDDDDALVSDDEKDKEDLEPSKGSQGS 354
>AKR_CHICK (Q90655) Homeobox protein AKR (Avian knotted-related protein)| Length = 269 Score = 52.0 bits (123), Expect = 1e-06 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++RR G LP ++ L+ W H YP+E +K L ++T L Q+ NWFIN R+R Sbjct: 35 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKVLLSRQTHLSTLQVCNWFINARRR 92
>IRX2_HUMAN (Q9BZI1) Iroquois-class homeodomain protein IRX-2 (Iroquois| homeobox protein 2) (Homeodomain protein IRXA2) Length = 471 Score = 51.6 bits (122), Expect = 2e-06 Identities = 23/48 (47%), Positives = 29/48 (60%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 D ATLKAW H K PYPT+ +K L T + L Q++ WF N R+R Sbjct: 124 DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 171
>IRX6_HUMAN (P78412) Iroquois-class homeodomain protein IRX-6 (Iroquois| homeobox protein 6) (Homeodomain protein IRXB3) Length = 445 Score = 51.6 bits (122), Expect = 2e-06 Identities = 28/77 (36%), Positives = 38/77 (49%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 +T +TLKAW H K PYPT+ +K L T + L Q++ WF N R+R N + + Sbjct: 156 ETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-LKKENKMTWAP 214 Query: 333 KTKKKRNVTGNDGAEQS 383 K K G E S Sbjct: 215 KNKGGEERKAEGGEEDS 231
>TGIF2_MOUSE (Q8C0Y1) Homeobox protein TGIF2 (TGFB-induced factor 2)| (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2) Length = 237 Score = 51.6 bits (122), Expect = 2e-06 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +++R G LP ++ L+ W H YP+E +K L +T L + QI NWFIN R+R Sbjct: 18 KRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
>TGIF2_HUMAN (Q9GZN2) Homeobox protein TGIF2 (TGFB-induced factor 2)| (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2) Length = 237 Score = 51.6 bits (122), Expect = 2e-06 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +++R G LP ++ L+ W H YP+E +K L +T L + QI NWFIN R+R Sbjct: 18 KRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
>IRXH_CAEEL (Q93348) Putative iroquois-class homeobox protein C36F7.1| Length = 356 Score = 51.2 bits (121), Expect = 2e-06 Identities = 24/59 (40%), Positives = 35/59 (59%) Frame = +3 Query: 120 MRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++KR A + + A LK W +H K PYP++ DK L TG+ L Q++ WF N R+R Sbjct: 117 IKKRNATR---EATAPLKDWLHSHRKNPYPSKADKVMLAVGTGMTLTQVSTWFANARRR 172
>CAUP_DROME (P54269) Homeobox protein caupolican| Length = 693 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 13/97 (13%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-------NWHSS 311 ++ ATLKAW H K PYPT+ +K L T + L Q++ WF N R+R W Sbjct: 236 ESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPK 295 Query: 312 NTASS------SEKTKKKRNVTGNDGAEQSW*TGSQM 404 N S+ K+K G + +++ G+Q+ Sbjct: 296 NKTEDDDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQL 332
>HM20_CAEEL (P41779) Homeobox protein ceh-20| Length = 338 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%) Frame = +3 Query: 36 LIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGK-LPGDTAATLKAWWQAHSKWPYPT 212 +I+R + ++ +LKQ E ++ +R + RR + L ++ H PYP+ Sbjct: 158 IIQRKFNGIQVQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYGHLSNPYPS 217 Query: 213 EDDKARLVQETGLQLKQINNWFINQR---KRNWHSSNTASSSEKTKKKRNVT 359 E+ K L ++ + + Q++NWF N+R K+N + +S KK +VT Sbjct: 218 EEAKEDLARQCNITVSQVSNWFGNKRIRYKKNMAKAQEEASMYAAKKNAHVT 269
>ATH1_ARATH (P48731) Homeobox protein ATH1| Length = 473 Score = 50.1 bits (118), Expect = 4e-06 Identities = 27/80 (33%), Positives = 40/80 (50%) Frame = +3 Query: 114 EIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRK 293 +I R +R LP + + L+ W + PYP + +K L +GL Q++NWFIN R Sbjct: 371 QIWRPQRG--LPEKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARV 428 Query: 294 RNWHSSNTASSSEKTKKKRN 353 R W +E K+K N Sbjct: 429 RLWKPMIEEMYAEMNKRKLN 448
>PBX2_MOUSE (O35984) Pre-B-cell leukemia transcription factor 2 (Homeobox| protein PBX2) Length = 430 Score = 49.7 bits (117), Expect = 6e-06 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +3 Query: 33 SLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGK-LPGDTAATLKAWWQAHSKWPYP 209 S+I R ++ +LKQ E ++ +R + RR + L ++ +H PYP Sbjct: 213 SIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYP 272 Query: 210 TEDDKARLVQETGLQLKQINNWFINQRKR 296 +E+ K L ++ G+ + Q++NWF N+R R Sbjct: 273 SEEAKEELAKKCGITVSQVSNWFGNKRIR 301
>PBX2_HUMAN (P40425) Pre-B-cell leukemia transcription factor 2 (Homeobox| protein PBX2) (Protein G17) Length = 430 Score = 49.7 bits (117), Expect = 6e-06 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +3 Query: 33 SLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGK-LPGDTAATLKAWWQAHSKWPYP 209 S+I R ++ +LKQ E ++ +R + RR + L ++ +H PYP Sbjct: 213 SIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYP 272 Query: 210 TEDDKARLVQETGLQLKQINNWFINQRKR 296 +E+ K L ++ G+ + Q++NWF N+R R Sbjct: 273 SEEAKEELAKKCGITVSQVSNWFGNKRIR 301
>PBX1_MOUSE (P41778) Pre-B-cell leukemia transcription factor 1 (Homeobox| protein PBX1) Length = 430 Score = 49.3 bits (116), Expect = 8e-06 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +3 Query: 33 SLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAAT-LKAWWQAHSKWPYP 209 S+I R ++ +LKQ E ++ +R + RR + A L ++ +H PYP Sbjct: 202 SIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYP 261 Query: 210 TEDDKARLVQETGLQLKQINNWFINQRKR 296 +E+ K L ++ G+ + Q++NWF N+R R Sbjct: 262 SEEAKEELAKKCGITVSQVSNWFGNKRIR 290
>PBX1_HUMAN (P40424) Pre-B-cell leukemia transcription factor 1 (Homeobox| protein PBX1) (Homeobox protein PRL) Length = 430 Score = 49.3 bits (116), Expect = 8e-06 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +3 Query: 33 SLIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAAT-LKAWWQAHSKWPYP 209 S+I R ++ +LKQ E ++ +R + RR + A L ++ +H PYP Sbjct: 202 SIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYP 261 Query: 210 TEDDKARLVQETGLQLKQINNWFINQRKR 296 +E+ K L ++ G+ + Q++NWF N+R R Sbjct: 262 SEEAKEELAKKCGITVSQVSNWFGNKRIR 290
>IRX1_MOUSE (P81068) Iroquois-class homeodomain protein IRX-1 (Iroquois| homeobox protein 1) (Homeodomain protein IRXA1) Length = 480 Score = 49.3 bits (116), Expect = 8e-06 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++ +TLKAW H K PYPT+ +K L T + L Q++ WF N R+R Sbjct: 137 ESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184
>IRX1_HUMAN (P78414) Iroquois-class homeodomain protein IRX-1 (Iroquois| homeobox protein 1) (Homeodomain protein IRXA1) Length = 480 Score = 49.3 bits (116), Expect = 8e-06 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++ +TLKAW H K PYPT+ +K L T + L Q++ WF N R+R Sbjct: 137 ESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 184
>PBX4_HUMAN (Q9BYU1) Pre-B-cell leukemia transcription factor 4 (Homeobox| protein PBX4) (Fragment) Length = 330 Score = 48.9 bits (115), Expect = 1e-05 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = +3 Query: 60 LKSELKQGYKEKLVDIREEIMRKRRAGK-LPGDTAATLKAWWQAHSKWPYPTEDDKARLV 236 ++ +LKQ E ++ +R ++ RR + L ++ +H PYP+E+ K L Sbjct: 144 IQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELA 203 Query: 237 QETGLQLKQINNWFINQRKR 296 ++ GL + Q++NWF N+R R Sbjct: 204 RKGGLTISQVSNWFGNKRIR 223
>EXD_DROME (P40427) Homeobox protein extradenticle| Length = 376 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 5/115 (4%) Frame = +3 Query: 6 TRILTEGERSLIERVRHE----LKSELKQGYKEKLVDIREEIMRKRRAGK-LPGDTAATL 170 TR +T E + ++ H+ ++ +LKQ E ++ +R + RR + + L Sbjct: 194 TRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEIL 253 Query: 171 KAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 ++ +H PYP+E+ K L ++ G+ + Q++NWF N+R R + N + E+ Sbjct: 254 NEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR--YKKNIGKAQEE 306
>PBX4_MOUSE (Q99NE9) Pre-B-cell leukemia transcription factor 4 (Homeobox| protein PBX4) Length = 378 Score = 48.5 bits (114), Expect = 1e-05 Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Frame = +3 Query: 60 LKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAA-TLKAWWQAHSKWPYPTEDDKARLV 236 ++ +LKQ E ++ +R + RR + A L ++ +H PYP+E+ K L Sbjct: 193 IQRQLKQSTCEAVMTLRSRFLDARRKRRNFSKQATDVLNEYFYSHLSNPYPSEETKEELA 252 Query: 237 QETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 ++ G+ + Q++NWF N+R R + NT E+ Sbjct: 253 RKGGITVSQVSNWFGNKRIR--YKKNTGKFQEE 283
>IRX6_MOUSE (Q9ER75) Iroquois-class homeodomain protein IRX-6 (Iroquois| homeobox protein 6) (Homeodomain protein IRXB3) Length = 438 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR-------NWHSS 311 ++ + LKAW H K PYPT+ +K L T + L Q++ WF N R+R W Sbjct: 153 ESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPK 212 Query: 312 NTASSSEKTKKKRNVTG 362 N K + G Sbjct: 213 NKGGEERKADSGEDSLG 229
>SIX5_MOUSE (P70178) Homeobox protein SIX5 (DM locus-associated homeodomain| protein homolog) Length = 719 Score = 46.6 bits (109), Expect = 5e-05 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +3 Query: 162 ATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTK 341 A LKA ++ + YPT D+K RL TGL L Q++NWF N+R+R+ + + K++ Sbjct: 207 AALKACYRGNR---YPTPDEKRRLATLTGLSLTQVSNWFKNRRQRD-RTGTGGGAPCKSE 262 Query: 342 KKRNVTGNDGAEQS 383 N T D + +S Sbjct: 263 SDGNPTTEDESSRS 276
>HM34_CAEEL (Q94165) Homeobox protein ceh-34| Length = 256 Score = 45.8 bits (107), Expect = 8e-05 Identities = 23/64 (35%), Positives = 37/64 (57%) Frame = +3 Query: 186 AHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTGN 365 A+ K YP+ +DK RL Q+T L + Q++NWF N+R+R + SS ++ + G+ Sbjct: 152 AYKKCQYPSVEDKRRLAQQTELSIIQVSNWFKNKRQRERAAGQLDRSSARSNDSDD--GS 209 Query: 366 DGAE 377 G E Sbjct: 210 SGCE 213
>SIX5_HUMAN (Q8N196) Homeobox protein SIX5 (DM locus-associated homeodomain| protein) Length = 739 Score = 45.8 bits (107), Expect = 8e-05 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +3 Query: 162 ATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTK 341 A LKA ++ + YPT D+K RL TGL L Q++NWF N+R+R+ + + K++ Sbjct: 214 AALKACYRGNR---YPTPDEKRRLATLTGLSLTQVSNWFKNRRQRD-RTGAGGGAPCKSE 269 Query: 342 KKRNVTGNDGAEQS 383 N T D + +S Sbjct: 270 SDGNPTTEDESSRS 283
>PBX3_MOUSE (O35317) Pre-B-cell leukemia transcription factor 3 (Homeobox| protein PBX3) Length = 434 Score = 45.8 bits (107), Expect = 8e-05 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Frame = +3 Query: 36 LIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGK-LPGDTAATLKAWWQAHSKWPYPT 212 +I R ++ +LKQ E ++ +R + RR + L ++ +H PYP+ Sbjct: 205 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPS 264 Query: 213 EDDKARLVQETGLQLKQINNWFINQRKR 296 E+ K L ++ + + Q++NWF N+R R Sbjct: 265 EEAKEELAKKCSITVSQVSNWFGNKRIR 292
>PBX3_HUMAN (P40426) Pre-B-cell leukemia transcription factor 3 (Homeobox| protein PBX3) Length = 434 Score = 45.8 bits (107), Expect = 8e-05 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Frame = +3 Query: 36 LIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGK-LPGDTAATLKAWWQAHSKWPYPT 212 +I R ++ +LKQ E ++ +R + RR + L ++ +H PYP+ Sbjct: 205 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPS 264 Query: 213 EDDKARLVQETGLQLKQINNWFINQRKR 296 E+ K L ++ + + Q++NWF N+R R Sbjct: 265 EEAKEELAKKCSITVSQVSNWFGNKRIR 292
>SIX1_MOUSE (Q62231) Homeobox protein SIX1 (Sine oculis homeobox homolog 1)| Length = 284 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 5/71 (7%) Frame = +3 Query: 180 WQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN-----WHSSNTASSSEKTKK 344 W AH+ PYP+ +K L + TGL Q++NWF N+R+R+ NT +++ + K Sbjct: 142 WYAHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENTENNNSSSNK 199 Query: 345 KRNVTGNDGAE 377 + ++ +G + Sbjct: 200 QNQLSPLEGGK 210
>SIX1_HUMAN (Q15475) Homeobox protein SIX1 (Sine oculis homeobox homolog 1)| Length = 284 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 5/71 (7%) Frame = +3 Query: 180 WQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN-----WHSSNTASSSEKTKK 344 W AH+ PYP+ +K L + TGL Q++NWF N+R+R+ NT +++ + K Sbjct: 142 WYAHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENTENNNSSSNK 199 Query: 345 KRNVTGNDGAE 377 + ++ +G + Sbjct: 200 QNQLSPLEGGK 210
>SIX4_HUMAN (Q9UIU6) Homeobox protein SIX4 (Sine oculis homeobox homolog 4)| Length = 760 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 YP+ +K L + TGL L Q++NWF N+R+R+ + S T S SE Sbjct: 226 YPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSE 268
>SIX4_MOUSE (Q61321) Homeobox protein SIX4 (Sine oculis homeobox homolog 4)| (Skeletal muscle-specific ARE binding protein AREC3) Length = 775 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 YP+ +K L + TGL L Q++NWF N+R+R+ + S T S SE Sbjct: 240 YPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSE 282
>SIX2_HUMAN (Q9NPC8) Homeobox protein SIX2 (Sine oculis homeobox homolog 2)| Length = 291 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%) Frame = +3 Query: 180 WQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR----------NWHSSNTASSS 329 W AH+ PYP+ +K L + TGL Q++NWF N+R+R N +SN+ S + Sbjct: 142 WYAHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENNENSNSNSHN 199 Query: 330 EKTKKKRNVTGNDGAEQS 383 ++V G+ E++ Sbjct: 200 PLNGSGKSVLGSSEDEKT 217
>MTAL2_CANAL (Q9UW22) Mating-type-like protein ALPHA2 (MTLalpha2 protein)| Length = 186 Score = 43.9 bits (102), Expect = 3e-04 Identities = 23/76 (30%), Positives = 37/76 (48%) Frame = +3 Query: 105 IREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFIN 284 I E+ +K ++ +L L+ W+Q H PY +D L++ T L Q+ NW N Sbjct: 106 IDEDDDKKIKSRRLTKKQLLVLEGWFQKHKNHPYSQKDQTNLLIKSTKLSKSQVQNWISN 165 Query: 285 QRKRNWHSSNTASSSE 332 +R++ NT S E Sbjct: 166 RRRK---EKNTKVSPE 178
>SO_DROME (Q27350) Protein sine oculis| Length = 416 Score = 43.5 bits (101), Expect = 4e-04 Identities = 19/52 (36%), Positives = 33/52 (63%) Frame = +3 Query: 180 WQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 W +H+ PYP+ +K L + TGL Q++NWF N+R+R+ + + S++K Sbjct: 236 WYSHN--PYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKDGSTDK 285
>HM40_CAEEL (Q19503) Homeobox protein ceh-40| Length = 329 Score = 43.1 bits (100), Expect = 5e-04 Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 1/94 (1%) Frame = +3 Query: 72 LKQGYKEKLVDIREEIMRKRRAGKLPGDTAAT-LKAWWQAHSKWPYPTEDDKARLVQETG 248 LKQ E+++ +++ + RR + T+ L ++ A+ PYP+E+ K L + Sbjct: 169 LKQTACEEVIQLKKRYLDARRKRRNFSKTSTEILNEYFLANINHPYPSEEVKQALAMQCN 228 Query: 249 LQLKQINNWFINQRKRNWHSSNTASSSEKTKKKR 350 + + Q++NWF N+R R + A + ++ ++ R Sbjct: 229 ISVAQVSNWFGNKRIR--YKKTMAKNEDERRENR 260
>SIX2_MOUSE (Q62232) Homeobox protein SIX2 (Sine oculis homeobox homolog 2)| Length = 296 Score = 43.1 bits (100), Expect = 5e-04 Identities = 18/40 (45%), Positives = 27/40 (67%) Frame = +3 Query: 180 WQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 W AH+ PYP+ +K L + TGL Q++NWF N+R+R+ Sbjct: 142 WYAHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 179
>HD1_ENCCU (Q8SUB7) Homeobox protein HD-1 (EcHD-1)| Length = 157 Score = 41.2 bits (95), Expect = 0.002 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKR 296 YP+E +KARL + L KQINNWF N+R R Sbjct: 117 YPSEAEKARLAKICKLSTKQINNWFTNKRNR 147
>HM32_CAEEL (Q23175) Homeobox protein ceh-32| Length = 439 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/69 (33%), Positives = 33/69 (47%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 T + L+ W+ K PYP K L TGL Q+ NWF N+R+R+ + Sbjct: 196 TRSLLREWYL---KDPYPNPPKKKELANATGLTQMQVGNWFKNRRQRD--------RAAA 244 Query: 336 TKKKRNVTG 362 K K+N+ G Sbjct: 245 AKNKQNIIG 253
>MTAL2_PICAN (Q707Y8) Mating-type protein ALPHA2 (MATalpha2 transcription| factor) Length = 163 Score = 40.4 bits (93), Expect = 0.004 Identities = 20/81 (24%), Positives = 40/81 (49%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWH 305 ++R+ + P L+ W+ + PY ++ D +LV +TGL Q+ NW N+R++ Sbjct: 81 EKRSKRFPKTAQMELENWYTENEDNPYLSKRDLQQLVHKTGLCAPQVRNWVSNRRRKERT 140 Query: 306 SSNTASSSEKTKKKRNVTGND 368 + + S+ + + ND Sbjct: 141 LTISKELSDLLNQDTRCSPND 161
>SIX3_CHICK (O42406) Homeobox protein SIX3 (Sine oculis homeobox homolog 3)| (CSIX3) Length = 314 Score = 40.4 bits (93), Expect = 0.004 Identities = 22/72 (30%), Positives = 34/72 (47%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 T + L+ W+ PYP K L Q TGL Q+ NWF N+R+R+ +++ K Sbjct: 199 TRSLLREWYLQD---PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD------RAAAAK 249 Query: 336 TKKKRNVTGNDG 371 + + G G Sbjct: 250 NRLQHQAIGQSG 261
>OPTIX_DROME (Q95RW8) Protein Optix (Homeobox protein SIX3) (D-Six3)| Length = 487 Score = 40.0 bits (92), Expect = 0.005 Identities = 21/69 (30%), Positives = 35/69 (50%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 T + L+ W+ PYP K L + TGL Q+ NWF N+R+R+ A++ + Sbjct: 167 TRSLLREWYLQD---PYPNPTKKRELAKATGLNPTQVGNWFKNRRQRD----RAAAAKNR 219 Query: 336 TKKKRNVTG 362 + +N +G Sbjct: 220 IQHSQNSSG 228
>SIX3_MOUSE (Q62233) Homeobox protein SIX3 (Sine oculis homeobox homolog 3)| Length = 333 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 T + L+ W+ PYP K L Q TGL Q+ NWF N+R+R+ Sbjct: 218 TRSLLREWYLQD---PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD 262
>SIX3_HUMAN (O95343) Homeobox protein SIX3 (Sine oculis homeobox homolog 3)| Length = 332 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 T + L+ W+ PYP K L Q TGL Q+ NWF N+R+R+ Sbjct: 217 TRSLLREWYLQD---PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD 261
>HM14_CAEEL (P20271) Homeobox protein ceh-14| Length = 351 Score = 39.7 bits (91), Expect = 0.006 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 12/122 (9%) Frame = +3 Query: 9 RILTEGERSLI--ERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWW 182 R L GE + + R K + +Q + ++ + KR + + TLK + Sbjct: 140 RSLETGEEFYLIADDARLVCKDDYEQARDKHCNELEGDGSNKRPRTTISAKSLETLKQAY 199 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRK----------RNWHSSNTASSSE 332 Q SK P + +L ETGL ++ + WF N+R R W SSN A S Sbjct: 200 QTSSK---PARHVREQLASETGLDMRVVQVWFQNRRAKEKRLKKDAGRRWKSSNRAESDS 256 Query: 333 KT 338 + Sbjct: 257 NS 258
>MTAL2_KLUDE (Q874N1) Mating-type protein ALPHA2| Length = 174 Score = 39.3 bits (90), Expect = 0.008 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = +3 Query: 132 RAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWH 305 R + + TL+AW+ H PY L Q+T L QI NW N+R++ H Sbjct: 111 RGHRFTKENVHTLEAWYSNHIDNPYLDPKSLQSLAQKTNLSKIQIKNWVSNRRRKQKH 168
>SIX6_MOUSE (Q9QZ28) Homeobox protein SIX6 (Sine oculis homeobox homolog 6)| (Optic homeobox 2) (Six9 protein) Length = 246 Score = 38.9 bits (89), Expect = 0.010 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 T L+ W+ PYP K L Q TGL Q+ NWF N+R+R+ Sbjct: 139 TRHLLREWYLQD---PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD 183
>SIX6_HUMAN (O95475) Homeobox protein SIX6 (Sine oculis homeobox homolog 6)| (Optic homeobox 2) (Homeodomain protein OPTX2) Length = 246 Score = 38.9 bits (89), Expect = 0.010 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 T L+ W+ PYP K L Q TGL Q+ NWF N+R+R+ Sbjct: 139 TRNLLREWYLQD---PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD 183
>SIX6_CHICK (O93307) Homeobox protein SIX6 (Sine oculis homeobox homolog 6)| (Optic homeobox 2) (Six9 protein) Length = 246 Score = 38.9 bits (89), Expect = 0.010 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 T L+ W+ PYP K L Q TGL Q+ NWF N+R+R+ Sbjct: 139 TRHLLREWYLQD---PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD 183
>HOX1A_MAIZE (P46605) Homeobox protein HOX1A| Length = 719 Score = 38.1 bits (87), Expect = 0.018 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASS 326 PYP+ K L +E GL +Q+N WF +R HS+ ASS Sbjct: 582 PYPSRSVKESLAEELGLTFRQVNKWFETRR----HSARVASS 619
>SIX3_ORYLA (O73916) Homeobox protein SIX3 (Sine oculis homeobox homolog 3)| Length = 272 Score = 37.4 bits (85), Expect = 0.030 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 T L+ W+ PYP K L TGL Q+ NWF N+R+R+ Sbjct: 180 TRGLLREWYLQD---PYPNPGKKRELAHATGLTPTQVGNWFKNRRQRD 224
>HOMEZ_RAT (Q8K3E9) Homeobox and leucine zipper protein Homez (Homeodomain| leucine zipper-containing factor) Length = 513 Score = 37.0 bits (84), Expect = 0.039 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Frame = +3 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR---NWHS 308 QA S +PYP+ D A L GLQ++++ WF+ QR R +W S Sbjct: 48 QAFSYFPYPSLADIALLCLRHGLQMEKVKTWFMAQRLRCGISWSS 92
>HAT31_ARATH (Q04996) Homeobox protein HAT3.1| Length = 661 Score = 37.0 bits (84), Expect = 0.039 Identities = 24/70 (34%), Positives = 37/70 (52%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTGNDGAEQS 383 YP + K L +E + +KQ+NNWF + R W ++ SE+ +K TG +G ++ Sbjct: 576 YPDKATKESLAKELQMTVKQVNNWF---KHRRWSINSKPLVSEENVEKLK-TGKEGECET 631 Query: 384 W*TGSQMKQT 413 GS KQT Sbjct: 632 SVAGSS-KQT 640
>HOMEZ_MOUSE (Q80W88) Homeobox and leucine zipper protein Homez (Homeodomain| leucine zipper-containing factor) Length = 518 Score = 37.0 bits (84), Expect = 0.039 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Frame = +3 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR---NWHS 308 QA S +PYP+ D A L GLQ++++ WF+ QR R +W S Sbjct: 48 QAFSYFPYPSLADIALLCLRHGLQMEKVKTWFMAQRLRCGISWSS 92
>MAAY3_SCHCO (P37934) Mating-type protein A-alpha Y3| Length = 926 Score = 37.0 bits (84), Expect = 0.039 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKR 296 YPT D+ L ++TG+Q +QI WF N R+R Sbjct: 171 YPTFADRRMLAEKTGMQTRQITVWFQNHRRR 201
>MTAL2_CANGA (Q86Z42) Mating-type-like protein ALPHA2 (MTL1alpha2 protein)| Length = 186 Score = 36.6 bits (83), Expect = 0.051 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +3 Query: 132 RAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 R + + L+ W++ H PY + + L Q+T L QI NW N+R++ Sbjct: 111 RGHRFTRENVQILETWYRNHIDNPYLDHNSQQYLAQKTNLSKIQIKNWVANRRRK 165
>MTL32_CANGA (Q870I4) Mating-type-like protein ALPHA2, silenced copy at MTL3| (MTL3alpha2 protein) Length = 210 Score = 36.6 bits (83), Expect = 0.051 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +3 Query: 132 RAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 R + + L+ W++ H PY + + L Q+T L QI NW N+R++ Sbjct: 111 RGHRFTRENVQILETWYRNHIDNPYLDHNSQQYLAQKTNLSKIQIKNWVANRRRK 165
>HM33_CAEEL (Q94166) Homeobox protein ceh-33| Length = 261 Score = 36.6 bits (83), Expect = 0.051 Identities = 16/44 (36%), Positives = 29/44 (65%) Frame = +3 Query: 168 LKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 L+ W+ +S YP+ +K L ++T L + Q++NWF N+R+R+ Sbjct: 148 LRDWYCRNS---YPSPREKRELAEKTHLTVTQVSNWFKNRRQRD 188
>MTAL2_KLULA (Q9HDS5) Mating-type protein ALPHA2 (MATalpha2 protein)| Length = 223 Score = 36.2 bits (82), Expect = 0.067 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +3 Query: 168 LKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 L+ W+ + + PY E+D A + + T L QI NW N+R+++ Sbjct: 166 LENWYSMNRRNPYLAENDLAYISKNTTLTKTQIKNWLANRRRKD 209
>MAAY1_SCHCO (P37936) Mating-type protein A-alpha Y1| Length = 891 Score = 35.8 bits (81), Expect = 0.088 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 14/101 (13%) Frame = +3 Query: 36 LIERVRHELKSELKQGYKEKLVDIREEI---MRKRRAGKLPGDTAATLKAWWQAHSKWP- 203 L+ +R L +E + + +++ + E+ M K+RA + T + K + HS++ Sbjct: 101 LLSTLRFRLYTEQVERWAVQVLQVAEQWRAEMEKQRA-HIAASTDKSKKPRPKFHSEYTP 159 Query: 204 ----------YPTEDDKARLVQETGLQLKQINNWFINQRKR 296 YPT D+ L ++TG+ +QI WF N R+R Sbjct: 160 LLELYFRFNAYPTYADRRVLAEKTGMLTRQITVWFQNHRRR 200
>MATPI_SCHPO (P10842) Mating-type P-specific polypeptide Pi| Length = 159 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRK 293 T L W H PYP+ + L TGL Q+ NWF N+R+ Sbjct: 114 TKPHLMRWLLLHYDNPYPSNSEFYDLSAATGLTRTQLRNWFSNRRR 159
>MATPI_SCHKA (Q6WRX8) Mating-type P-specific polypeptide Pi| Length = 159 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRK 293 T L W H PYP+ + L TGL Q+ NWF N+R+ Sbjct: 114 TKPHLMRWLLLHYDNPYPSNSEFYDLSAATGLTRTQLRNWFSNRRR 159
>LIM_HALRO (Q25132) LIM/homeobox protein LIM (HRLIM)| Length = 514 Score = 35.4 bits (80), Expect = 0.11 Identities = 25/87 (28%), Positives = 41/87 (47%) Frame = +3 Query: 36 LIERVRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTE 215 L+E R K + +Q K + DI + R R TA L+ A+++ P P Sbjct: 384 LLEDNRLVCKKDYEQA-KSRDADIENGVKRPRTT-----ITAKQLETLKSAYNQSPKPAR 437 Query: 216 DDKARLVQETGLQLKQINNWFINQRKR 296 + +L ETGL ++ + WF N+R + Sbjct: 438 HVREQLSSETGLDMRVVQVWFQNRRAK 464
>LHX1_BRARE (Q90476) LIM/homeobox protein Lhx1 (Homeobox protein LIM-1)| Length = 405 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 193 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 233
>LHX5_RAT (P61376) LIM/homeobox protein Lhx5 (Homeobox protein LIM-2)| Length = 402 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX5_MOUSE (P61375) LIM/homeobox protein Lhx5| Length = 402 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX5_HUMAN (Q9H2C1) LIM/homeobox protein Lhx5| Length = 402 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>Y260_MYCGE (P47502) Hypothetical lipoprotein MG260 precursor| Length = 765 Score = 35.4 bits (80), Expect = 0.11 Identities = 26/101 (25%), Positives = 46/101 (45%) Frame = +3 Query: 237 QETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTGNDGAEQSW*TGSQMKQTR 416 ++ ++ K+ NWF+NQ +W+S+N +S++T K D A S+ + K + Sbjct: 595 EKENIETKKFVNWFLNQSITDWNSNNQQKNSDQTTKTAAEYFTDQA--SYILPLKEKFNK 652 Query: 417 CKQYNLYHEECCSISXTPLSSFSLVGQLDTKTTRSLAKKSS 539 L S T +S SL+ ++ T S A K + Sbjct: 653 SSDLELKGSSSSSNLTTSSASASLLISNNSSTASSPAPKKT 693
>LHX1_SAIBB (Q5IS89) LIM/homeobox protein Lhx1 (LIM homeobox protein 1)| Length = 406 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX1_RAT (P63007) LIM/homeobox protein Lhx1 (LIM homeobox protein 1)| (Homeobox protein Lim-1) (Rlim) Length = 406 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX1_PANTR (Q5IS44) LIM/homeobox protein Lhx1 (LIM homeobox protein 1)| Length = 406 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX1_MOUSE (P63006) LIM/homeobox protein Lhx1 (LIM homeobox protein 1)| (Homeobox protein Lim-1) Length = 406 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX1_MESAU (P63008) LIM/homeobox protein Lhx1 (LIM homeobox protein 1)| (Homeobox protein Lim-1) (Homeobox protein LMX-2) Length = 406 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX1_HUMAN (P48742) LIM/homeobox protein Lhx1 (LIM homeobox protein 1)| (Homeobox protein Lim-1) Length = 406 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX1_CHICK (P53411) LIM/homeobox protein Lhx1 (Homeobox protein LIM-1)| Length = 406 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX1_XENLA (P29674) LIM/homeobox protein Lhx1 (Homeobox protein LIM-1)| (xLIM-1) Length = 403 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A + P PT + +L QETGL ++ I WF N+R + Sbjct: 193 TLKA---AFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 233
>HOMEZ_HUMAN (Q8IX15) Homeobox and leucine zipper protein Homez (Homeodomain| leucine zipper-containing factor) Length = 525 Score = 35.0 bits (79), Expect = 0.15 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +3 Query: 192 SKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR---NWHSSNTASSSEKTKKKRN 353 S +PYP+ D A L GLQ++++ WF+ QR R +W S + + +R+ Sbjct: 51 SYFPYPSLADIALLCLRYGLQMEKVKTWFMAQRLRCGISWSSEEIEETRARVVYRRD 107
>LHX3_MOUSE (P50481) LIM/homeobox protein Lhx3 (Homeobox protein LIM-3)| (Homeobox protein P-LIM) (LIM homeobox protein 3) Length = 400 Score = 35.0 bits (79), Expect = 0.15 Identities = 20/76 (26%), Positives = 35/76 (46%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 TA L+ A++ P P + +L ETGL ++ + WF N+R + A Sbjct: 168 TAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRW 227 Query: 336 TKKKRNVTGNDGAEQS 383 + RN+ + G+ +S Sbjct: 228 GQYFRNMKRSRGSSKS 243
>LHX3_CHICK (P53412) LIM/homeobox protein Lhx3 (Homeobox protein LIM-3)| Length = 395 Score = 35.0 bits (79), Expect = 0.15 Identities = 20/76 (26%), Positives = 34/76 (44%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 TA L+ A++ P P + +L ETGL ++ + WF N+R + A Sbjct: 162 TAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRW 221 Query: 336 TKKKRNVTGNDGAEQS 383 + RN+ + G +S Sbjct: 222 GQYFRNMKRSRGTSKS 237
>PRH_PETCR (P48786) Pathogenesis-related homeodomain protein (PRHP)| Length = 1088 Score = 34.7 bits (78), Expect = 0.20 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +3 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 Q+ + YP K L E L ++Q++NWF N+R HSS S K Sbjct: 952 QSFKENQYPQRAVKESLAAELALSVRQVSNWFNNRRWSFRHSSRIGSDVAK 1002
>LHX3_HUMAN (Q9UBR4) LIM/homeobox protein Lhx3| Length = 397 Score = 34.7 bits (78), Expect = 0.20 Identities = 20/76 (26%), Positives = 34/76 (44%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 TA L+ A++ P P + +L ETGL ++ + WF N+R + A Sbjct: 165 TAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRW 224 Query: 336 TKKKRNVTGNDGAEQS 383 + RN+ + G +S Sbjct: 225 GQYFRNMKRSRGGSKS 240
>LHX3_BRARE (Q90421) LIM/homeobox protein Lhx3 (Homeobox protein LIM-3)| Length = 398 Score = 34.7 bits (78), Expect = 0.20 Identities = 20/76 (26%), Positives = 34/76 (44%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 TA L+ A++ P P + +L ETGL ++ + WF N+R + A Sbjct: 162 TAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRW 221 Query: 336 TKKKRNVTGNDGAEQS 383 + RN+ + G +S Sbjct: 222 GQYFRNMKRSRGTSKS 237
>MAAY4_SCHCO (P37935) Mating-type protein A-alpha Y4| Length = 928 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 KR K + L+ ++ ++ YPT D+ L ++TG+ +QI WF N R+R Sbjct: 153 KRSRPKFHSEYTPVLELYFHFNA---YPTYADRRILAEKTGMLTRQITVWFQNHRRR 206
>HD6_ENCCU (Q8SVT6) Homeobox protein HD-6 (EcHD-6)| Length = 121 Score = 34.3 bits (77), Expect = 0.26 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Frame = +3 Query: 93 KLVDIREEIMRKRRAGKLPGDTAATLKAWWQA---HS--KWPYPTEDDKARLVQETGLQL 257 KLVD ++I R + P + L W HS PYP +K L +T + + Sbjct: 10 KLVDSEKDIERSYEPRRKPKRSRIQLHDWQSMLLEHSFRMNPYPDRIEKYNLFLKTKIPM 69 Query: 258 KQINNWFINQRKR 296 K + WF N+R R Sbjct: 70 KNVKIWFQNRRAR 82
>LHX5_BRARE (P52889) LIM/homeobox protein Lhx5 (Homeobox protein LIM-5)| Length = 399 Score = 34.3 bits (77), Expect = 0.26 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA + A P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKAAFVAT---PKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>MATA1_CANAL (Q9UW23) Mating-type-like protein A1 (MTLa1 protein)| Length = 210 Score = 34.3 bits (77), Expect = 0.26 Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 3/107 (2%) Frame = +3 Query: 27 ERSLIERVRHELKSEL---KQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSK 197 E +E++ E+ ++ K + L+ E K++ +L T L+ ++ + + Sbjct: 106 EEFALEQITFEVSDQMDDDKDSEDDILIKGEEIKKSKKKRQRLDNSTKEFLEKVFEKNKQ 165 Query: 198 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKT 338 P ++ + ++ G+ L QI WF N+R R + A SS + Sbjct: 166 ---PNRRERELIAEKHGVSLSQIRVWFTNKRMRKKEPKSKAKSSSNS 209
>LHX5_XENLA (P37137) LIM/homeobox protein Lhx5 (Homeobox protein LIM-5)| (xLIM-5) (xLIM-2A) Length = 402 Score = 34.3 bits (77), Expect = 0.26 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TLKA A P PT + +L QETGL ++ I WF N+R + Sbjct: 194 TLKA---AFIATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 234
>LHX3_XENLA (P36200) LIM/homeobox protein Lhx3 (Homeobox protein LIM-3)| (xLIM-3) Length = 395 Score = 34.3 bits (77), Expect = 0.26 Identities = 20/76 (26%), Positives = 34/76 (44%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 TA L+ A++ P P + +L ETGL ++ + WF N+R + A Sbjct: 162 TAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRW 221 Query: 336 TKKKRNVTGNDGAEQS 383 + RN+ + G +S Sbjct: 222 GQYFRNMKRSRGNSKS 237
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 33.9 bits (76), Expect = 0.33 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 9/134 (6%) Frame = +3 Query: 60 LKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQ 239 L ++L Q Y+ +L + KR ++ D L+ ++ ++ P+E+ + Sbjct: 2131 LPADLAQLYQHQLNPTLLQQQNKRPRTRITDDQLRVLRQYFDINNS---PSEEQIKEMAD 2187 Query: 240 ETGLQLKQINNWFIN----QRKRN----WHSSN-TASSSEKTKKKRNVTGNDGAEQSW*T 392 ++GL K I +WF N +R+RN ++ SN +S E+ K + +Q + Sbjct: 2188 KSGLPQKVIKHWFRNTLFKERQRNKDSPYNFSNPPITSLEELKIDSRPPSPEPQKQEYWG 2247 Query: 393 GSQMKQTRCKQYNL 434 + +TR Y L Sbjct: 2248 SKRSSRTRFTDYQL 2261
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 33.9 bits (76), Expect = 0.33 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 9/134 (6%) Frame = +3 Query: 60 LKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQ 239 L ++L Q Y+ +L + KR ++ D L+ ++ ++ P+E+ + Sbjct: 2124 LPADLAQLYQHQLNPTLLQQQNKRPRTRITDDQLRVLRQYFDINNS---PSEEQIKEMAD 2180 Query: 240 ETGLQLKQINNWFIN----QRKRN----WHSSN-TASSSEKTKKKRNVTGNDGAEQSW*T 392 ++GL K I +WF N +R+RN ++ SN +S E+ K + +Q + Sbjct: 2181 KSGLPQKVIKHWFRNTLFKERQRNKDSPYNFSNPPITSLEELKIDSRPPSPEPPKQEYWG 2240 Query: 393 GSQMKQTRCKQYNL 434 + +TR Y L Sbjct: 2241 SKRSSRTRFTDYQL 2254
>LHX3_PIG (O97581) LIM/homeobox protein Lhx3 (Homeobox protein LIM-3)| (Homeobox protein P-LIM) (LIM homeobox protein 3) (Fragment) Length = 383 Score = 33.5 bits (75), Expect = 0.44 Identities = 20/76 (26%), Positives = 33/76 (43%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEK 335 TA L+ A++ P P + +L ETGL ++ + WF N+R + A Sbjct: 150 TAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRW 209 Query: 336 TKKKRNVTGNDGAEQS 383 + RN+ G +S Sbjct: 210 GQYFRNMKRARGGSKS 225
>ZHX3_HUMAN (Q9H4I2) Zinc finger and homeobox protein 3 (Triple homeobox 1| protein) Length = 956 Score = 33.5 bits (75), Expect = 0.44 Identities = 15/71 (21%), Positives = 37/71 (52%) Frame = +3 Query: 168 LKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKK 347 L+A + ++ P P +++ RL ET + ++I++WF +RK+ + ++++ Sbjct: 624 LRALESSFAQNPLPLDEELDRLRSETKMTRREIDSWFSERRKKVNAEETKKAEENASQEE 683 Query: 348 RNVTGNDGAEQ 380 ++G E+ Sbjct: 684 EEAAEDEGGEE 694
>FWA_ARATH (Q9FVI6) Homeobox protein FWA| Length = 686 Score = 33.5 bits (75), Expect = 0.44 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSN 314 P+PTE+ + L Q + + Q+ NWF Q KRN N Sbjct: 63 PHPTEEQRYELGQRLNMGVNQVKNWF--QNKRNLEKIN 98
>MEC3_CAEBR (P34764) Mechanosensory protein 3| Length = 318 Score = 33.1 bits (74), Expect = 0.57 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +3 Query: 192 SKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 S P P++ +A+L ETGL ++ I WF N+R + Sbjct: 234 SNTPKPSKHARAKLALETGLSMRVIQVWFQNRRSK 268
>LIN11_CAEEL (P20154) Protein lin-11 (Abnormal cell lineage protein 11)| Length = 405 Score = 33.1 bits (74), Expect = 0.57 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +3 Query: 129 RRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 +R G A L+ A + P PT + +L ETGL ++ I WF N+R + Sbjct: 240 KRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSK 295
>HME2B_XENLA (P52730) Homeobox protein engrailed-2-B (En-2B) (EN2 MABEN)| Length = 265 Score = 33.1 bits (74), Expect = 0.57 Identities = 26/80 (32%), Positives = 36/80 (45%) Frame = +3 Query: 87 KEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQI 266 K K + +E R R A + LKA +Q + Y TE + L QE GL QI Sbjct: 166 KPKKKSVSKEDKRPRTA--FTAEQLQRLKAEFQTNR---YLTEQRRQSLAQELGLNESQI 220 Query: 267 NNWFINQRKRNWHSSNTASS 326 WF N+R + S+ +S Sbjct: 221 KIWFQNKRAKIKKSTGNKNS 240
>MEC3_CAEEL (P09088) Mechanosensory protein 3| Length = 321 Score = 33.1 bits (74), Expect = 0.57 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +3 Query: 192 SKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 S P P++ +A+L ETGL ++ I WF N+R + Sbjct: 237 SNTPKPSKHARAKLALETGLSMRVIQVWFQNRRSK 271
>MATA1_PICAN (Q707Y6) Mating-type protein A1 (MATa1 transcription factor)| Length = 181 Score = 32.7 bits (73), Expect = 0.74 Identities = 20/72 (27%), Positives = 35/72 (48%) Frame = +3 Query: 84 YKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQ 263 YKE LV E K++ +P + L+ +A +P ++ R+ +E G+ Q Sbjct: 112 YKECLVS---ECFDKKKRRHIPESSKELLE---KAFKVKRFPNSKERERIARECGISPLQ 165 Query: 264 INNWFINQRKRN 299 + WF N+R R+ Sbjct: 166 VRVWFTNKRARS 177
>B7_USTMA (P22021) Mating-type locus allele B7 protein| Length = 410 Score = 32.7 bits (73), Expect = 0.74 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 17/69 (24%) Frame = +3 Query: 201 PYPTEDDKARLVQETG---------------LQLKQINNWFINQRKRN-W-HSSNTASSS 329 PYPT+++K LV+ T L++ Q+ WFIN R+R+ W H + Sbjct: 133 PYPTQEEKEGLVRLTNESTARVGLSNATRPPLEVHQLTLWFINARRRSGWSHILKKFARE 192 Query: 330 EKTKKKRNV 356 ++++ KR V Sbjct: 193 DRSRMKRLV 201
>HLX1_MOUSE (Q61670) Homeobox protein HLX1| Length = 476 Score = 32.3 bits (72), Expect = 0.97 Identities = 21/99 (21%), Positives = 40/99 (40%) Frame = +3 Query: 48 VRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKA 227 V+H+ + Y D + +++R+ + K + Y T+ D+ Sbjct: 245 VQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRK 304 Query: 228 RLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKK 344 +L GL Q+ WF N+R + HS + +K K+ Sbjct: 305 QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKE 343
>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)| Length = 488 Score = 32.3 bits (72), Expect = 0.97 Identities = 21/99 (21%), Positives = 40/99 (40%) Frame = +3 Query: 48 VRHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKA 227 V+H+ + Y D + +++R+ + K + Y T+ D+ Sbjct: 248 VQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRK 307 Query: 228 RLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKK 344 +L GL Q+ WF N+R + HS + +K K+ Sbjct: 308 QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKE 346
>GSBN_DROME (P09083) Protein gooseberry-neuro (Protein gooseberry proximal)| (BSH4) Length = 449 Score = 32.3 bits (72), Expect = 0.97 Identities = 21/60 (35%), Positives = 30/60 (50%) Frame = +3 Query: 117 IMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 + RK+R + TA L+A +A S+ YP + L Q T L +I WF N+R R Sbjct: 178 LKRKQRRSRTTF-TAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
>ZHX2_PONPY (Q5R7F2) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) Length = 837 Score = 32.3 bits (72), Expect = 0.97 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +3 Query: 141 KLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRK-RNWHSSNT 317 K T +K + K +PT+ + RL ET L ++I++WF +RK R+ Sbjct: 532 KFKEKTQGQVKILEDSFLKSSFPTQAELDRLRVETKLSRREIDSWFSERRKLRDSMEQAV 591 Query: 318 ASSSEKTKKKRNVTGNDGA 374 S KK ++V +GA Sbjct: 592 LDSMGSGKKGQDVGAPNGA 610 Score = 30.4 bits (67), Expect = 3.7 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 DT AT+ + +K+PYPT+ + + L + + I WF QR ++ S + E Sbjct: 272 DTNATMI---NSFNKFPYPTQAELSWLTAASKHPEEHIRIWFATQRLKHGISWSPEEVEE 328 Query: 333 KTKKKRNVT 359 KK N T Sbjct: 329 ARKKMFNGT 337 Score = 29.3 bits (64), Expect = 8.2 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Frame = +3 Query: 111 EEIMRKRRAGKLPGDTAATLKAWWQAH--------SKWPYPTEDDKARLVQETGLQLKQI 266 +++ + LP + A K+ Q H ++WP P E D+ L +TGL +I Sbjct: 615 DQLSGAQLTSSLPSPSPAIAKSQEQVHLLRSTFARTQWPTPQEYDQ--LAAKTGLVRTEI 672 Query: 267 NNWFINQR 290 WF R Sbjct: 673 VRWFKENR 680
>ZHX2_HUMAN (Q9Y6X8) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP) Length = 837 Score = 32.3 bits (72), Expect = 0.97 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +3 Query: 141 KLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRK-RNWHSSNT 317 K T +K + K +PT+ + RL ET L ++I++WF +RK R+ Sbjct: 532 KFKEKTQGQVKILEDSFLKSSFPTQAELDRLRVETKLSRREIDSWFSERRKLRDSMEQAV 591 Query: 318 ASSSEKTKKKRNVTGNDGA 374 S KK ++V +GA Sbjct: 592 LDSMGSGKKGQDVGAPNGA 610 Score = 30.4 bits (67), Expect = 3.7 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 DT AT+ + +K+PYPT+ + + L + + I WF QR ++ S + E Sbjct: 272 DTNATMI---NSFNKFPYPTQAELSWLTAASKHPEEHIRIWFATQRLKHGISWSPEEVEE 328 Query: 333 KTKKKRNVT 359 KK N T Sbjct: 329 ARKKMFNGT 337 Score = 29.3 bits (64), Expect = 8.2 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Frame = +3 Query: 111 EEIMRKRRAGKLPGDTAATLKAWWQAH--------SKWPYPTEDDKARLVQETGLQLKQI 266 +++ + LP + A K+ Q H ++WP P E D+ L +TGL +I Sbjct: 615 DQLSGAQLTSSLPSPSPAIAKSQEQVHLLRSTFARTQWPTPQEYDQ--LAAKTGLVRTEI 672 Query: 267 NNWFINQR 290 WF R Sbjct: 673 VRWFKENR 680
>HNF6_RAT (P70512) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 6/50 (12%) Frame = +3 Query: 207 PTEDDKARLVQETGLQLKQINNWFINQRKRN---WH---SSNTASSSEKT 338 P+++ + + Q+ GL+L ++N+F+N R+R+ W SSN+ +SS + Sbjct: 410 PSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDEGSSNSGNSSSSS 459
>HNF6_HUMAN (Q9UBC0) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 6/50 (12%) Frame = +3 Query: 207 PTEDDKARLVQETGLQLKQINNWFINQRKRN---WH---SSNTASSSEKT 338 P+++ + + Q+ GL+L ++N+F+N R+R+ W SSN+ +SS + Sbjct: 410 PSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDEGSSNSGNSSSSS 459
>ZHX2_MOUSE (Q8C0C0) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP) Length = 836 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 8/68 (11%) Frame = +3 Query: 111 EEIMRKRRAGKLPGDTAATLKAWWQAH--------SKWPYPTEDDKARLVQETGLQLKQI 266 +++ + AG LP ++A ++ Q H ++WP P E D+ L +TGL +I Sbjct: 615 DQLSGAQLAGSLPSPSSAIVQNQEQVHLLRSTFARTQWPTPQEYDQ--LAAKTGLVRTEI 672 Query: 267 NNWFINQR 290 WF R Sbjct: 673 VRWFKENR 680 Score = 31.2 bits (69), Expect = 2.2 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +3 Query: 168 LKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRK-RNWHSSNTASSSEKTKK 344 LK + K +PT+ + RL ET L ++I++WF +RK R+ S KK Sbjct: 541 LKTLEDSFLKSSFPTQAEVERLRVETKLSRREIDSWFSERRKLRDSMEQAVLDSMGSGKK 600 Query: 345 KRNVTGNDGA 374 + +GA Sbjct: 601 GSDAVAPNGA 610 Score = 30.4 bits (67), Expect = 3.7 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTG 362 +P + + RL++ TGL +I WF + R R +S K + +TG Sbjct: 463 FPDDAEVYRLIEVTGLARSEIKKWFSDHRYRCQRGIVHITSESLAKDQMAITG 515 Score = 30.4 bits (67), Expect = 3.7 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 DT AT+ + +K+PYPT+ + + L + + I WF QR ++ S + E Sbjct: 272 DTNATMI---NSFNKFPYPTQAELSWLTAASKHPEEHIRIWFATQRLKHGISWSPEEVEE 328 Query: 333 KTKKKRNVT 359 KK N T Sbjct: 329 ARKKMFNGT 337
>LHX4_MOUSE (P53776) LIM/homeobox protein Lhx4| Length = 367 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TA L+ A+ P P + +L ETGL ++ + WF N+R + Sbjct: 142 TAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAK 188
>LHX4_HUMAN (Q969G2) LIM/homeobox protein Lhx4| Length = 367 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +3 Query: 156 TAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 TA L+ A+ P P + +L ETGL ++ + WF N+R + Sbjct: 142 TAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAK 188
>MATA1_CANGA (Q708A7) Mating-type-like protein A1 (MTL1a1 protein)| Length = 130 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +3 Query: 183 QAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSN 314 + SK Y T +K +L + G+ Q+ WF N+RKR+ +N Sbjct: 85 ETFSKKRYLTRCEKHQLAVQCGITTNQVQIWFANRRKRSKDLNN 128
>HNF6_MOUSE (O08755) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 31.6 bits (70), Expect = 1.7 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 6/50 (12%) Frame = +3 Query: 207 PTEDDKARLVQETGLQLKQINNWFINQRKRN---WH---SSNTASSSEKT 338 P+++ + + Q+ GL+L ++N+F+N R+R+ W SN+ SSS + Sbjct: 410 PSKELQITISQQLGLELSTVSNFFMNARRRSLDKWQDEGGSNSGSSSSSS 459
>HME2A_XENLA (P52729) Homeobox protein engrailed-2-A (En-2A) (EN2 1.4)| Length = 265 Score = 31.6 bits (70), Expect = 1.7 Identities = 24/70 (34%), Positives = 31/70 (44%) Frame = +3 Query: 87 KEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQI 266 K K + +E R R A D LKA +Q + Y TE + L QE L QI Sbjct: 166 KPKKKSVSKEDKRPRTA--FTADQLQRLKAEFQTNR---YLTEQRRQSLAQELSLNESQI 220 Query: 267 NNWFINQRKR 296 WF N+R + Sbjct: 221 KIWFQNKRAK 230
>PO5F1_PIG (Q9TSV5) POU domain, class 5, transcription factor 1| (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) Length = 360 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 302 RKR+ + L++ + + P PT + + Q+ GL+ + WF N+R++ Sbjct: 230 RKRKRTSIENRVRGNLESMFL---QCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGK 286 Query: 303 HSSNTASSSE 332 SS+ S E Sbjct: 287 RSSSDYSQRE 296
>PO5F1_BOVIN (O97552) POU domain, class 5, transcription factor 1| (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) Length = 360 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 302 RKR+ + L++ + + P PT + + Q+ GL+ + WF N+R++ Sbjct: 230 RKRKRTSIENRVRGNLESMFL---QCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGK 286 Query: 303 HSSNTASSSE 332 SS+ S E Sbjct: 287 RSSSDYSQRE 296
>ATHB6_ARATH (P46668) Homeobox-leucine zipper protein ATHB-6 (Homeodomain| transcription factor ATHB-6) (HD-ZIP protein ATHB-6) Length = 311 Score = 31.6 bits (70), Expect = 1.7 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Frame = +3 Query: 78 QGYKEK---LVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETG 248 +GY+E+ +V+ R + + +L + L+ ++ +K + K +L QE G Sbjct: 41 EGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELENKLE---PERKVKLAQELG 97 Query: 249 LQLKQINNWFINQRKR 296 LQ +Q+ WF N+R R Sbjct: 98 LQPRQVAVWFQNRRAR 113
>B5_USTMA (P22019) Mating-type locus allele B5 protein| Length = 410 Score = 31.6 bits (70), Expect = 1.7 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 15/48 (31%) Frame = +3 Query: 201 PYPTEDDKARLVQETG---------------LQLKQINNWFINQRKRN 299 PYPT+++K LV+ T L++ Q+ WFIN R+R+ Sbjct: 133 PYPTQEEKQNLVRLTNESTVRVGSSNPARPPLEVHQLTLWFINARRRS 180
>B3_USTMA (P22017) Mating-type locus allele B3 protein| Length = 410 Score = 31.6 bits (70), Expect = 1.7 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 17/69 (24%) Frame = +3 Query: 201 PYPTEDDKARLVQETG---------------LQLKQINNWFINQRKRN-W-HSSNTASSS 329 PYPT+++K LV+ T L++ Q+ WFIN R+R+ W H + Sbjct: 133 PYPTQEEKEGLVRLTNESTARIRPSNAIRPPLEVHQLTLWFINARRRSGWSHILKKFARE 192 Query: 330 EKTKKKRNV 356 + ++ KR V Sbjct: 193 DPSRMKRLV 201
>HME1B_XENLA (P31538) Homeobox protein engrailed-1-B (En-1B) (Fragment)| Length = 171 Score = 31.2 bits (69), Expect = 2.2 Identities = 23/68 (33%), Positives = 30/68 (44%) Frame = +3 Query: 93 KLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINN 272 KL + E KR + LKA +QA+ Y TE + L QE L QI Sbjct: 72 KLKKKKSEKEDKRPRTAFTAEQLQRLKAEFQANR---YITEQRRQTLAQELSLNESQIKI 128 Query: 273 WFINQRKR 296 WF N+R + Sbjct: 129 WFQNKRAK 136
>HME1_HUMAN (Q05925) Homeobox protein engrailed-1 (Hu-En-1)| Length = 392 Score = 31.2 bits (69), Expect = 2.2 Identities = 23/68 (33%), Positives = 30/68 (44%) Frame = +3 Query: 93 KLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINN 272 KL + E KR + LKA +QA+ Y TE + L QE L QI Sbjct: 293 KLKKKKNEKEDKRPRTAFTAEQLQRLKAEFQANR---YITEQRRQTLAQELSLNESQIKI 349 Query: 273 WFINQRKR 296 WF N+R + Sbjct: 350 WFQNKRAK 357
>ZHX3_MOUSE (Q8C0Q2) Zinc finger and homeobox protein 3 (Triple homeobox 1| protein) Length = 951 Score = 31.2 bits (69), Expect = 2.2 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKK 344 P P E++ RL ET + ++I+ WF +RK+ ++E+TKK Sbjct: 630 PLPPEEELDRLRSETKMTRREIDGWFSERRKK--------VNTEETKK 669
>B6_USTMA (P22020) Mating-type locus allele B6 protein| Length = 410 Score = 31.2 bits (69), Expect = 2.2 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 15/48 (31%) Frame = +3 Query: 201 PYPTEDDKARLVQETG---------------LQLKQINNWFINQRKRN 299 PYPT+++K LV+ T L++ Q+ WFIN R+R+ Sbjct: 133 PYPTQEEKETLVRLTNESTARVGQSSVNRPPLEVHQLTLWFINARRRS 180
>B4_USTMA (P22018) Mating-type locus allele B4 protein| Length = 410 Score = 31.2 bits (69), Expect = 2.2 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 15/48 (31%) Frame = +3 Query: 201 PYPTEDDKARLVQETG---------------LQLKQINNWFINQRKRN 299 PYPT+++K LV+ T L++ Q+ WFIN R+R+ Sbjct: 133 PYPTQEEKETLVRLTNESTARVGQSIVNRPPLEVHQLTLWFINARRRS 180
>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)| Length = 401 Score = 31.2 bits (69), Expect = 2.2 Identities = 23/68 (33%), Positives = 30/68 (44%) Frame = +3 Query: 93 KLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINN 272 KL + E KR + LKA +QA+ Y TE + L QE L QI Sbjct: 302 KLKKKKNEKEDKRPRTAFTAEQLQRLKAEFQANR---YITEQRRQTLAQELSLNESQIKI 358 Query: 273 WFINQRKR 296 WF N+R + Sbjct: 359 WFQNKRAK 366
>MEC3_CAEVU (P34765) Mechanosensory protein 3| Length = 320 Score = 30.8 bits (68), Expect = 2.8 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +3 Query: 192 SKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 S P P++ +A+ ETGL ++ I WF N+R + Sbjct: 236 SNTPKPSKHARAKKALETGLSMRVIQVWFQNRRSK 270
>RPOA_PRRS1 (Q9YN02) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP Length = 3966 Score = 30.8 bits (68), Expect = 2.8 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLK 260 +R+ G LP DT WW P +D + R + G Q K Sbjct: 254 ERQHGCLPADTVPEGNCWWSLFDLLPLEVQDKEIRHANQFGYQTK 298
>ASL1_ARATH (O80931) Protein ASYMMETRIC LEAVES1 (Myb-related protein 91)| (AtMYB91) (Protein PHANTASTICA) Length = 367 Score = 30.8 bits (68), Expect = 2.8 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Frame = +3 Query: 15 LTEGERSLIERVRHELKSELKQGY---KEKLVDIREEIMR----KRRAGKLPGDTAATLK 173 L +S +ER ++ LK +K+G +E+ + IR + K+ A ++PG TA L Sbjct: 38 LNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLG 97 Query: 174 AWWQAHSKWPYPTEDDKARLVQ 239 WW+ + E + + V+ Sbjct: 98 KWWEVFKEKQQREEKESNKRVE 119
>MATA2_YEAST (Q6B184) Hypothetical mating-type protein A2 (MATa2 protein)| Length = 119 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/65 (23%), Positives = 30/65 (46%) Frame = +3 Query: 102 DIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFI 281 D+ + + R + + L++W+ + + PY L++ T L QI NW Sbjct: 31 DMINKSTKPYRGHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVS 90 Query: 282 NQRKR 296 N+R++ Sbjct: 91 NRRRK 95
>LMX1A_MOUSE (Q9JKU8) LIM homeobox transcription factor 1 alpha (LIM/homeobox| protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1) Length = 382 Score = 30.8 bits (68), Expect = 2.8 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%) Frame = +3 Query: 171 KAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQ--------RKRNWHSSNTASS 326 KA ++ SK P + L ETGL ++ + WF NQ R++ + ++ Sbjct: 211 KASFEVSSK---PCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQQDQQNT 267 Query: 327 SEKTKKKRNVTGNDGAE 377 T + N +GN G E Sbjct: 268 QRLTSAQTNGSGNAGME 284
>HXB8A_BRARE (Q8AWZ0) Homeobox protein Hox-B8a (Hox-B8)| Length = 245 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/73 (23%), Positives = 30/73 (41%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTGNDGAEQ 380 PY T + + GL +Q+ WF N+R + W N +K ++ + E+ Sbjct: 168 PYLTRKRRIEVSHALGLTERQVKIWFQNRRMK-WKKENNKDKFPSSKSEQEQIEKEKREK 226 Query: 381 SW*TGSQMKQTRC 419 +G+Q C Sbjct: 227 EQASGTQSAGEDC 239
>HGL2_ARATH (P46607) Homeobox protein GLABRA2 (Homeobox-leucine zipper protein| ATHB-10) (HD-ZIP protein ATHB-10) Length = 745 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQR 290 KR+ K T ++ + P+P E + +L ++ GL +Q+ WF N+R Sbjct: 97 KRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRR 151
>MTAL2_YEAST (Q6B2C0) Mating-type protein ALPHA2 (MATalpha2 protein) (Alpha-2| repressor) Length = 210 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/65 (23%), Positives = 30/65 (46%) Frame = +3 Query: 102 DIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFI 281 D+ + + R + + L++W+ + + PY L++ T L QI NW Sbjct: 122 DMINKSTKPYRGHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVS 181 Query: 282 NQRKR 296 N+R++ Sbjct: 182 NRRRK 186
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/57 (35%), Positives = 26/57 (45%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 KR + LKA +Q + Y TE + L QE GL QI WF N+R + Sbjct: 200 KRPRTAFTAEQLQRLKAEFQTNR---YLTEQRRQSLAQELGLNESQIKIWFQNKRAK 253
>HAT7_ARATH (Q00466) Homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)| (HD-ZIP protein ATHB-3) Length = 314 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 222 KARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTGND 368 K +L + GLQ +QI WF N+R R W + + KK+ +V +D Sbjct: 142 KMQLAKALGLQPRQIAIWFQNRRAR-WKTKQLERDYDSLKKQFDVLKSD 189
>HME2A_BRARE (P09015) Homeobox protein engrailed-2a (Zf-En-2) (Eng2)| Length = 265 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/57 (35%), Positives = 26/57 (45%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 KR + LKA +Q + Y TE + L QE GL QI WF N+R + Sbjct: 177 KRPRTAFTAEQLQRLKAEFQTNR---YLTEQRRQSLAQELGLNESQIKIWFQNKRAK 230
>B2_USTMA (P22016) Mating-type locus allele B2 protein| Length = 410 Score = 30.8 bits (68), Expect = 2.8 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 15/48 (31%) Frame = +3 Query: 201 PYPTEDDKARLVQETG---------------LQLKQINNWFINQRKRN 299 PYPT+++K LV+ T L++ Q+ WFIN R+R+ Sbjct: 133 PYPTQEEKEGLVRLTNESTARVGLSKANRPPLEVHQLTLWFINARRRS 180
>MAB11_COPCI (P40333) Mating-type protein beta1-1| Length = 681 Score = 30.8 bits (68), Expect = 2.8 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 PYP+ + + ++ ++T K I+ WFI+ R+R Sbjct: 191 PYPSGEVRTQIARQTRTSRKDIDAWFIDARRR 222
>ISL2_BRARE (P53406) Insulin gene enhancer protein isl-2 (Islet-2)| Length = 359 Score = 30.8 bits (68), Expect = 2.8 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 2/126 (1%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTAS--SSEKT 338 TL+ + A+ P P K +LV+ TGL + I WF N+R ++ S ++ Sbjct: 205 TLRTCYNAN---PRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQH 261 Query: 339 KKKRNVTGNDGAEQSW*TGSQMKQTRCKQYNLYHEECCSISXTPLSSFSLVGQLDTKTTR 518 K N+ G G GS ++ Q N + LS F+L LD + Sbjct: 262 NDKTNLQGLTGTPLV--AGSPIRHDTTVQGNPVEVQTYQPPWKALSEFALQSDLDQPAFQ 319 Query: 519 SLAKKS 536 L S Sbjct: 320 QLVSFS 325
>HMENA_MYXGL (P31535) Homeobox protein engrailed-like A (EN-A) (Fragment)| Length = 60 Score = 30.4 bits (67), Expect = 3.7 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 D A L+A +QA+ Y TE+ + L +E L QI WF N+R + Sbjct: 2 DQLARLRAEFQANR---YLTEERRQNLARELSLNEAQIKIWFQNKRAK 46
>GSC_BRARE (P53544) Homeobox protein goosecoid (ZGSC)| Length = 240 Score = 30.4 bits (67), Expect = 3.7 Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Frame = +3 Query: 36 LIERVRHELKSELKQGYKEKL-VDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPT 212 LI V H++ S + G + + + ++ +R+ T L+A + YP Sbjct: 113 LISPVPHQMMSYMNVGTLSRTELQLLNQLHCRRKRRHRTIFTDEQLEALENLFQETKYPD 172 Query: 213 EDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKR 350 + +L ++ L+ +++ WF N+R + W +SS E ++ Sbjct: 173 VGTREQLARKVHLREEKVEVWFKNRRAK-WRRQKRSSSEESENSQK 217
>ZHX2_RAT (Q80VX4) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP) (Fragment) Length = 164 Score = 30.4 bits (67), Expect = 3.7 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +3 Query: 153 DTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 DT AT+ + +K+PYPT+ + + L + + I WF QR ++ S + E Sbjct: 78 DTNATMI---NSFNKFPYPTQAELSWLTAASKHPEEHIRIWFATQRLKHGISWSPEEVEE 134 Query: 333 KTKKKRNVT 359 KK N T Sbjct: 135 ARKKMFNGT 143
>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) (EGA) Length = 962 Score = 30.4 bits (67), Expect = 3.7 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +1 Query: 361 VMTARSNRGRLGPR*NKLDVNNTTFIMKSAAVYPXPLSPLSLWWGN 498 V +N R+ R + + +T +SA+ YP PLS L +WG+ Sbjct: 421 VPATHTNSLRIAARNHIQTIASTHLTTQSASGYPAPLSSLEYYWGS 466
>ONEC2_HUMAN (O95948) One cut domain family member 2 (Transcription factor| ONECUT-2) (OC-2) Length = 485 Score = 30.4 bits (67), Expect = 3.7 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = +3 Query: 207 PTEDDKARLVQETGLQLKQINNWFINQRKRN---WHSSNTASSSEKT 338 P+++ + + Q+ GL+L ++N+F+N R+R+ W + S T Sbjct: 432 PSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDDLSTGGSSST 478
>DBX1_MOUSE (P52950) Homeobox protein DBX1| Length = 335 Score = 30.4 bits (67), Expect = 3.7 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +3 Query: 171 KAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSS 311 KA + K Y ++ D+ +L + GL+ Q+ WF N+R + W +S Sbjct: 194 KALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMK-WRNS 239
>HM43_CAEEL (Q18273) Homeobox protein ceh-43| Length = 273 Score = 30.4 bits (67), Expect = 3.7 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = +3 Query: 195 KWPYPTEDDKARLVQETGLQLKQINNWFIN----QRKRNWHSSNTASSSE 332 K Y D+A L E GL Q+ WF N Q+K+ SS+ AS E Sbjct: 123 KTQYLALPDRAALAHELGLSQTQVKIWFQNRRSKQKKQKGGSSDHASDEE 172
>ATHB7_ARATH (P46897) Homeobox-leucine zipper protein ATHB-7 (Homeodomain| transcription factor ATHB-7) (HD-ZIP protein ATHB-7) Length = 258 Score = 30.4 bits (67), Expect = 3.7 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 14/57 (24%) Frame = +3 Query: 222 KARLVQETGLQLKQINNWFINQRKRNWHS--------------SNTASSSEKTKKKR 350 K +L +E GLQ +Q+ WF N+R R W S N AS E KK++ Sbjct: 59 KVQLARELGLQPRQVAIWFQNKRAR-WKSKQLETEYNILRQNYDNLASQFESLKKEK 114
>GCYA3_CANFA (Q4ZHS0) Guanylate cyclase soluble subunit alpha-3 (EC 4.6.1.2)| (GCS-alpha-3) (Soluble guanylate cyclase large subunit) (GCS-alpha-1) Length = 690 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -3 Query: 164 SCSIPRKFTSSPLSHDLLPDINQLFFVP 81 SCSIPRK SP ++ LL D F P Sbjct: 609 SCSIPRKINVSPTTYRLLKDCPGFVFTP 636
>ATHB5_ARATH (P46667) Homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein| ATHB-5) Length = 312 Score = 30.4 bits (67), Expect = 3.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +3 Query: 222 KARLVQETGLQLKQINNWFINQRKR 296 K +L QE GLQ +Q+ WF N+R R Sbjct: 99 KVKLAQELGLQPRQVAIWFQNRRAR 123
>HXADA_BRARE (Q6W990) Homeobox protein Hox-A13a| Length = 310 Score = 30.0 bits (66), Expect = 4.8 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 302 R+ R ++P T LK + ++ + T+D + R+ +T L +Q+ WF N+R + Sbjct: 242 RRGRKKRVPY-TKVQLKELEREYATNKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEK 300 Query: 303 HSSNTASSS 329 N SS Sbjct: 301 KVVNKLKSS 309
>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1| Length = 364 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVT 359 Y ++ARL G+ Q+ WF N+R + W + A + KK+ + T Sbjct: 260 YLAGPERARLAYSLGMTESQVKVWFQNRRTK-WRKKHAAEMATAKKKQDSET 310
>ISL2A_ONCTS (P53408) Insulin gene enhancer protein ISL-2A (Islet-2A)| Length = 358 Score = 30.0 bits (66), Expect = 4.8 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 2/126 (1%) Frame = +3 Query: 165 TLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKT-- 338 TL+ + A+ P P K +LV+ TGL + I WF N+R ++ S ++ Sbjct: 204 TLRTCYNAN---PRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIFMKQLQQQHH 260 Query: 339 KKKRNVTGNDGAEQSW*TGSQMKQTRCKQYNLYHEECCSISXTPLSSFSLVGQLDTKTTR 518 K N+ G G GS ++ Q N + LS F+L LD + Sbjct: 261 SDKTNLQGLTGTPLV--AGSPIRHDNTVQGNPVEVQTYQPPWKALSEFALQSDLDQPAFQ 318 Query: 519 SLAKKS 536 L S Sbjct: 319 QLVSFS 324
>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1| Length = 367 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVT 359 Y ++ARL G+ Q+ WF N+R + W + A + KK+ + T Sbjct: 260 YLAGPERARLAYSLGMTESQVKVWFQNRRTK-WRKKHAAEMATAKKKQDSET 310
>NKX61_RAT (O35762) Homeobox protein Nkx-6.1| Length = 365 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVT 359 Y ++ARL G+ Q+ WF N+R + W + A + KK+ + T Sbjct: 261 YLAGPERARLAYSLGMTESQVKVWFQNRRTK-WRKKHAAEMATAKKKQDSET 311
>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1| Length = 365 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVT 359 Y ++ARL G+ Q+ WF N+R + W + A + KK+ + T Sbjct: 261 YLAGPERARLAYSLGMTESQVKVWFQNRRTK-WRKKHAAEMATAKKKQDSET 311
>GSCA_XENLA (P29454) Homeobox protein goosecoid isoform A| Length = 243 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/87 (22%), Positives = 40/87 (45%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 302 RKRR + D L+A + YP + +L + L+ +++ WF N+R + Sbjct: 147 RKRRHRTIFTDEQ--LEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWR 204 Query: 303 HSSNTASSSEKTKKKRNVTGNDGAEQS 383 ++S + +K N + + AE++ Sbjct: 205 RQKRSSSEESENAQKWNKSSKNSAEKA 231
>GCYA3_MOUSE (Q9ERL9) Guanylate cyclase soluble subunit alpha-3 (EC 4.6.1.2)| (GCS-alpha-3) (Soluble guanylate cyclase large subunit) (GCS-alpha-1) Length = 691 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 164 SCSIPRKFTSSPLSHDLLPDINQLFFVP 81 SCS+PRK SP ++ LL D F P Sbjct: 609 SCSVPRKINVSPTTYRLLKDCPGFVFTP 636
>GCYA1_BOVIN (P19687) Guanylate cyclase soluble subunit alpha-1 (EC 4.6.1.2)| (GCS-alpha-1) (Soluble guanylate cyclase large subunit) Length = 691 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 164 SCSIPRKFTSSPLSHDLLPDINQLFFVP 81 SCS+PRK SP ++ LL D F P Sbjct: 610 SCSVPRKINVSPTTYRLLKDCPGFVFTP 637
>CUT_DROME (P10180) Homeobox protein cut| Length = 2175 Score = 30.0 bits (66), Expect = 4.8 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 PYP L E GL + I NWF N R R Sbjct: 1768 PYPNVGTIEFLANELGLATRTITNWFHNHRMR 1799
>HM23_CAEEL (P34663) Homeobox protein ceh-23| Length = 305 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/58 (25%), Positives = 23/58 (39%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVTGNDGAE 377 Y ++ L Q GL Q+ WF N+R ++ S ++K G D E Sbjct: 235 YVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQEEQQSTTLEEKSEEIGKDEEE 292
>CP1B1_HUMAN (Q16678) Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)| Length = 543 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 144 LPGDTAATLKAWWQAHS--KWPYPTEDDKARLVQETGLQLKQINN 272 +P DT + W H KWP P D AR + + GL K + + Sbjct: 414 IPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTS 458
>PO5F1_PANTR (Q7YR49) POU domain, class 5, transcription factor 1| (Octamer-binding transcription factor 3) (Oct-3) Length = 360 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 P PT + + Q+ GL+ + WF N+R++ SS+ + E Sbjct: 253 PKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQRE 296
>PO5F1_MACMU (Q5TM49) POU domain, class 5, transcription factor 1| (Octamer-binding transcription factor 3) (Oct-3) Length = 360 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 P PT + + Q+ GL+ + WF N+R++ SS+ + E Sbjct: 253 PKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQRE 296
>PO5F1_HUMAN (Q01860) POU domain, class 5, transcription factor 1| (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) Length = 360 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +3 Query: 201 PYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSE 332 P PT + + Q+ GL+ + WF N+R++ SS+ + E Sbjct: 253 PKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQRE 296
>GCYA3_RAT (P19686) Guanylate cyclase soluble subunit alpha-3 (EC 4.6.1.2)| (GCS-alpha-3) (Soluble guanylate cyclase large subunit) (GCS-alpha-1) Length = 690 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 164 SCSIPRKFTSSPLSHDLLPDINQLFFVP 81 SCS+PRK SP ++ LL D F P Sbjct: 608 SCSVPRKINVSPTTYRLLKDCPGFVFTP 635
>GCYA3_HUMAN (Q02108) Guanylate cyclase soluble subunit alpha-3 (EC 4.6.1.2)| (GCS-alpha-3) (Soluble guanylate cyclase large subunit) (GCS-alpha-1) Length = 690 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 164 SCSIPRKFTSSPLSHDLLPDINQLFFVP 81 SCS+PRK SP ++ LL D F P Sbjct: 609 SCSVPRKINVSPTTYRLLKDCPGFVFTP 636
>HME1A_XENLA (P31537) Homeobox protein engrailed-1-A (En-1A) (Fragment)| Length = 60 Score = 29.6 bits (65), Expect = 6.3 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +3 Query: 168 LKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 LKA +QA+ Y TE + L QE L QI WF N+R + Sbjct: 7 LKAEFQANR---YITEQRRQSLAQELSLNESQIKIWFQNKRAK 46
>ONEC2_MOUSE (Q6XBJ3) One cut domain family member 2 (Transcription factor| ONECUT-2) (OC-2) Length = 486 Score = 29.6 bits (65), Expect = 6.3 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 10/53 (18%) Frame = +3 Query: 207 PTEDDKARLVQETGLQLKQINNWFINQRKRN---WH-------SSNTASSSEK 335 P+++ + + Q+ GL+L ++N+F+N R+R+ W SS+T+S+ K Sbjct: 433 PSKEMQITISQQLGLELTTVSNFFMNARRRSLEKWQDDLGTGGSSSTSSTCTK 485
>GSCB_XENLA (P53546) Homeobox protein goosecoid isoform B| Length = 243 Score = 29.6 bits (65), Expect = 6.3 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 302 RKRR + D L+A + YP + +L + L+ +++ WF N+R + Sbjct: 147 RKRRHRTIFTDEQ--LEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWR 204 Query: 303 HSSNTASSSEKTKKKRNVTGNDGAEQ 380 ++S + +K N + + AE+ Sbjct: 205 RQKRSSSEESENAQKWNKSSKNSAEK 230
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.6 bits (65), Expect = 6.3 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +3 Query: 261 QINNWFINQRKRNWHSSNTASSSEKTKKKRNVTGNDGAEQSW*TGSQM-KQTRCKQ 425 Q+NN ++Q N SNT S S K K+K + T N + S +G + K TRC + Sbjct: 295 QLNNLTLSQN--NTSGSNTPSPSTKGKRKHHETSNSEKKDS--SGQTIPKCTRCNE 346
>HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4)| (HD-ZIP protein ATHB-2) Length = 284 Score = 29.6 bits (65), Expect = 6.3 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +3 Query: 129 RRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 R+ +L D +A L+ ++ HS K L ++ GL+ +Q+ WF N+R R Sbjct: 128 RKKLRLSKDQSAILEETFKDHSTL---NPKQKQALAKQLGLRARQVEVWFQNRRAR 180
>YA3B_SCHPO (Q09716) Hypothetical protein C18B11.11 in chromosome I| Length = 1294 Score = 29.6 bits (65), Expect = 6.3 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +3 Query: 42 ERVRHELKSE--LKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTE 215 +R++ + +E K +KLVD ++I+ + G + AAT+ W A K + Sbjct: 24 KRIKRLINNEQFCKNVILQKLVDSTKDIIENKVHGNI---LAATISLWTHAAEKHKEMSS 80 Query: 216 DDKARLVQE 242 DD+A L E Sbjct: 81 DDRALLFNE 89
>PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2| (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2) Length = 411 Score = 29.6 bits (65), Expect = 6.3 Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 69 ELKQGYKEKLV--DIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQE 242 E ++ ++EKL ++ +KR+ + +L+A++ P P+ + A + ++ Sbjct: 327 EAEKSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQ---PRPSSEKIAAIAEK 383 Query: 243 TGLQLKQINNWFINQRKR 296 L+ + WF NQR++ Sbjct: 384 LDLKKNVVRVWFCNQRQK 401
>HME2B_BRARE (P31533) Homeobox protein engrailed-2b (Zf-En-1) (Eng3)| Length = 261 Score = 29.6 bits (65), Expect = 6.3 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKR 296 Y TE + L QE GL QI WF N+R + Sbjct: 196 YLTEQRRQALAQELGLNESQIKIWFQNKRAK 226
>PO4F2_HUMAN (Q12837) POU domain, class 4, transcription factor 2| (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) Length = 410 Score = 29.6 bits (65), Expect = 6.3 Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 69 ELKQGYKEKLV--DIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQE 242 E ++ ++EKL ++ +KR+ + +L+A++ P P+ + A + ++ Sbjct: 326 EAEKSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQ---PRPSSEKIAAIAEK 382 Query: 243 TGLQLKQINNWFINQRKR 296 L+ + WF NQR++ Sbjct: 383 LDLKKNVVRVWFCNQRQK 400
>HHEX_CHICK (Q05502) Homeobox protein PRH (Hematopoietically expressed| homeobox) Length = 277 Score = 29.6 bits (65), Expect = 6.3 Identities = 19/88 (21%), Positives = 41/88 (46%) Frame = +3 Query: 120 MRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRN 299 + KR+ G++ T++ + ++ Y + ++ RL + L +Q+ WF N+R + Sbjct: 141 LHKRKGGQVRFSNEQTIELEKKFETQ-KYLSPPERKRLAKLLQLSERQVKTWFQNRRAK- 198 Query: 300 WHSSNTASSSEKTKKKRNVTGNDGAEQS 383 W + K++ TG+ G +S Sbjct: 199 WRRLKQENPQATKKEEAEGTGDHGDPRS 226
>B1_USTMA (P22015) Mating-type locus allele B1 protein| Length = 410 Score = 29.6 bits (65), Expect = 6.3 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 15/48 (31%) Frame = +3 Query: 201 PYPTEDDKARLVQETG---------------LQLKQINNWFINQRKRN 299 PYPT+++K LV+ T L++ + WFIN R+R+ Sbjct: 133 PYPTQEEKETLVRLTNESTARVGQSSVNRPPLEVHHVTLWFINARRRS 180
>RPC8_MOUSE (Q9D2C6) DNA-directed RNA polymerase III subunit 22.9 kDa| polypeptide (EC 2.7.7.6) (RPC8) Length = 204 Score = 29.6 bits (65), Expect = 6.3 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +3 Query: 198 WPYPTEDDKARLVQETG--LQLKQINNWFINQRKRNWHSSNTASSSEKTKKK 347 W Y TE+ L +TG ++ + ++ F++ S+ ASSSE+ KK Sbjct: 129 WEYETEEGAHDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKK 180
>CR2_HUMAN (P20023) Complement receptor type 2 precursor (Cr2) (Complement C3d| receptor) (Epstein-Barr virus receptor) (EBV receptor) (CD21 antigen) Length = 1033 Score = 29.3 bits (64), Expect = 8.2 Identities = 25/97 (25%), Positives = 40/97 (41%) Frame = -1 Query: 358 VTFLFFLVFSLEEAVLLLCQFRLRWLMNQLLICFSCNPVSCTRRALSSSVGYGHLE*ACH 179 VTF FS+ + CQ W +L C S P+ C + + GH H Sbjct: 114 VTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLECPALPM---IHNGH-----H 165 Query: 178 QAFNVAAVSPGSLPALLFRMISSLISTSFSLYPCLSS 68 + NV +++PG ++ + S + + CLSS Sbjct: 166 TSENVGSIAPGL--SVTYSCESGYLLVGEKIINCLSS 200
>ZHX1_RAT (Q8R515) Zinc fingers and homeoboxes protein 1| Length = 873 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 Query: 192 SKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSN 314 ++WP P E DK L +E+GL I +WF + R W + N Sbjct: 682 TQWPSPEEYDK--LAEESGLARTDIVSWFGDTRYA-WKNGN 719 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 189 HSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVT 359 ++K+PYPT + L + +QI WF QR ++ S E +K+ N T Sbjct: 303 YNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGT 359
>ZHX1_MOUSE (P70121) Zinc fingers and homeoboxes protein 1| Length = 873 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 189 HSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVT 359 ++K+PYPT + L + +QI WF QR ++ S E +K+ N T Sbjct: 303 YNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGT 359
>ZHX1_HUMAN (Q9UKY1) Zinc fingers and homeoboxes protein 1| Length = 873 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 189 HSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNTASSSEKTKKKRNVT 359 ++K+PYPT + L + +QI WF QR ++ S E +K+ N T Sbjct: 303 YNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGT 359
>HMIN_BOMMO (P27610) Homeobox protein invected| Length = 476 Score = 29.3 bits (64), Expect = 8.2 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 13/71 (18%) Frame = +3 Query: 123 RKRRAGKLPGDTAATLKAWWQAHSKWP-------------YPTEDDKARLVQETGLQLKQ 263 R RR K PGDTA+ + + P Y TE + L E GL Q Sbjct: 356 RTRRPKKPPGDTASNDEKRPRTAFSGPQLARLKHEFAENRYLTERRRQSLAAELGLAEAQ 415 Query: 264 INNWFINQRKR 296 I WF N+R + Sbjct: 416 IKIWFQNKRAK 426
>EPIPL_HUMAN (P58107) Epiplakin (450 kDa epidermal antigen)| Length = 5065 Score = 29.3 bits (64), Expect = 8.2 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = +3 Query: 72 LKQGYKEKLVDIRE---EIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQE 242 +K+G E V I E +++ R A G A + ++W S PY TED K L+QE Sbjct: 1735 IKKG--ENYVYINEATRHVLQSRTAKMRVGRFADQVVSFWDLLSS-PYFTEDRKRELIQE 1791 Query: 243 TGLQ 254 G Q Sbjct: 1792 YGAQ 1795
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = +3 Query: 120 MRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++K R P + A +A+ Q PYP+ L + L+ + NWF N R R Sbjct: 684 LKKPRVVLAPEEKEALKRAYQQK----PYPSPKTIEELATQLNLKTSTVINWFHNYRSR 738
>HMEN_HELTR (P23397) Homeobox protein Ht-En (Fragment)| Length = 98 Score = 29.3 bits (64), Expect = 8.2 Identities = 20/57 (35%), Positives = 26/57 (45%) Frame = +3 Query: 126 KRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 KR GD A LK + S+ Y TE + L +E L QI WF N+R + Sbjct: 4 KRPRTAFTGDQLARLK---REFSENKYLTEQRRTCLAKELNLNESQIKIWFQNKRAK 57
>TPP1_RAT (Q9EQV6) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)| (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl aminopeptidase) Length = 563 Score = 29.3 bits (64), Expect = 8.2 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 204 YPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSSNT 317 Y T +D A LVQ + L L+ + W + R+ HS T Sbjct: 79 YLTLEDVAELVQPSPLTLRTVQKWLLAAGARDCHSVTT 116
>RAD5_SCHPO (P36607) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1133 Score = 29.3 bits (64), Expect = 8.2 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%) Frame = +3 Query: 3 GTRILTEGERSLIERVRHELKSELKQGYKE-KLVDIR----EEIMR-----KRRAGKLPG 152 GTR L GER +ER + +KS+ + K+ KL+ I I+R GKLP Sbjct: 219 GTRTLQAGERIYLERQKLSIKSQSRNSRKKSKLLSINSSCYSNIVRFCNSDHHEIGKLPT 278 Query: 153 DTAATL 170 + A+ + Sbjct: 279 EVASVI 284
>CUTL1_RAT (P53565) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (CDP2) (Fragment) Length = 862 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = +3 Query: 120 MRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++K R P + A +A+ Q PYP+ L + L+ + NWF N R R Sbjct: 586 LKKPRVVLAPEEKEALKRAYQQK----PYPSPKTIEELATQLNLKTSTVINWFHNYRSR 640
>CUTL1_MOUSE (P53564) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Cux) Length = 1515 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = +3 Query: 120 MRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 296 ++K R P + A +A+ Q PYP+ L + L+ + NWF N R R Sbjct: 1239 LKKPRVVLAPEEKEALKRAYQQK----PYPSPKTIEELATQLNLKTSTVINWFHNYRSR 1293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,432,418 Number of Sequences: 219361 Number of extensions: 1661617 Number of successful extensions: 6143 Number of sequences better than 10.0: 250 Number of HSP's better than 10.0 without gapping: 5907 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6140 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
