ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016261.1| Zea mays clone Contig94 mRNA sequence 100 1e-18
2dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein,... 100 1e-18
3gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA,... 100 1e-18
4gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence 76 1e-11
5gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds 76 1e-11
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-11
7dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-11
8dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-11
9dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-11
10dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-11
11gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps... 76 1e-11
12ref|XM_388890.1| Gibberella zeae PH-1 chromosome 2 conserved hyp... 64 6e-08
13ref|XM_475130.1| Oryza sativa (japonica cultivar-group), predic... 60 9e-07
14gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-07
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-07
16dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-07
17ref|NM_193994.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-05
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-05
19dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-05
20dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-05
21ref|NM_001036769.1| Arabidopsis thaliana structural constituent ... 54 5e-05
22ref|NM_120791.2| Arabidopsis thaliana structural constituent of ... 54 5e-05
23gb|BT018605.1| Zea mays clone EL01N0450E04.d mRNA sequence 54 5e-05
24gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal prote... 54 5e-05
25gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal prote... 54 5e-05
26emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, B... 54 5e-05
27gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, co... 54 5e-05
28gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, co... 54 5e-05
29emb|BX824247.1|CNS0A6X1 Arabidopsis thaliana Full-length cDNA Co... 54 5e-05
30emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Co... 54 5e-05
31emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Co... 54 5e-05
32emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Co... 54 5e-05
33emb|BX832253.1|CNS09ZUO Arabidopsis thaliana Full-length cDNA Co... 54 5e-05
34gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete s... 54 5e-05
35dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 5e-05
36ref|NM_127291.2| Arabidopsis thaliana structural constituent of ... 46 0.013
37gb|AY062983.1| Arabidopsis thaliana putative ribosomal protein S... 46 0.013
38gb|AY035131.1| Arabidopsis thaliana putative ribosomal protein S... 46 0.013
39gb|AY064625.1| Arabidopsis thaliana unknown protein mRNA, comple... 46 0.013
40gb|AF370469.1|AF370469 Arabidopsis thaliana Unknown protein mRNA... 46 0.013
41emb|BX820506.1|CNS0A8QA Arabidopsis thaliana Full-length cDNA Co... 46 0.013
42emb|BX818868.1|CNS0A8UP Arabidopsis thaliana Full-length cDNA Co... 46 0.013
43emb|BX818793.1|CNS0A8YY Arabidopsis thaliana Full-length cDNA Co... 46 0.013
44emb|BX833645.1|CNS0A1VP Arabidopsis thaliana Full-length cDNA Co... 46 0.013
45emb|BX831856.1|CNS09ZNQ Arabidopsis thaliana Full-length cDNA Co... 46 0.013
46gb|AY084230.1| Arabidopsis thaliana clone 10042 mRNA, complete s... 46 0.013
47gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II sectio... 46 0.013
48gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4... 46 0.013
49dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 0.20
50emb|X76651.1|STRPS4 S.tuberosum (Desiree) mRNA for ribosomal pro... 42 0.20
51gb|DQ268839.1| Solanum tuberosum clone 130D11 40S ribosomal prot... 42 0.20
52gb|AF359361.3| Gibberella zeae strain GZ3639 trichothecene gene ... 40 0.81
53ref|XM_383708.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 0.81
54gb|AF336366.2| Gibberella zeae H-11 trichothecene biosynthesis g... 40 0.81
55gb|AY857461.1| Suberites domuncula S4 mRNA, complete cds 40 0.81
56dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, com... 40 0.81
57ref|NM_125228.3| Arabidopsis thaliana structural constituent of ... 38 3.2
58gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 3.2
59gb|BT014201.1| Lycopersicon esculentum clone 133378R, mRNA sequence 38 3.2
60ref|XM_567206.1| Cryptococcus neoformans var. neoformans JEC21 h... 38 3.2
61gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, comp... 38 3.2
62gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, comp... 38 3.2
63gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mR... 38 3.2
64emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Co... 38 3.2
65emb|BX832133.1|CNS09ZP1 Arabidopsis thaliana Full-length cDNA Co... 38 3.2
66emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Co... 38 3.2
67emb|BX830139.1|CNS09ZZ0 Arabidopsis thaliana Full-length cDNA Co... 38 3.2
68emb|BX829418.1|CNS09ZZ4 Arabidopsis thaliana Full-length cDNA Co... 38 3.2
69emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Co... 38 3.2
70gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete s... 38 3.2
71dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 3.2
72emb|X79300.1|GHRS4E G.hirsutum (DPL 62) mRNA for ribosomal prote... 38 3.2 
>gb|BT016261.1| Zea mays clone Contig94 mRNA sequence
          Length = 1116

 Score = 99.6 bits (50), Expect = 1e-18
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||||||||||||||| ||||||||||| || ||| | ||||| |||
Sbjct: 616 gacttcatcaagtttgacgtcggcaacgtggtcatggtgaccggcgggaggaacaccggg 675

                             
Query: 61  cgtgttggtgtgatcaag 78
           ||||| ||||||||||||
Sbjct: 676 cgtgtaggtgtgatcaag 693
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>dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds
          Length = 1053

 Score = 99.6 bits (50), Expect = 1e-18
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || ||||| || |||||||| ||||||||||| |||||||| 
Sbjct: 606 gacttcatcaagtttgatgttggcaatgttgtcatggttactggtgggcgtaacactggc 665

                             
Query: 61  cgtgttggtgtgatcaag 78
           ||||||||||||||||||
Sbjct: 666 cgtgttggtgtgatcaag 683
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>gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA, complete cds
          Length = 1090

 Score = 99.6 bits (50), Expect = 1e-18
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||||||||||||||| ||||||||||| || ||| | ||||| |||
Sbjct: 595 gacttcatcaagtttgacgtcggcaacgtggtcatggtgaccggcgggaggaacaccggg 654

                             
Query: 61  cgtgttggtgtgatcaag 78
           ||||| ||||||||||||
Sbjct: 655 cgtgtaggtgtgatcaag 672
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>gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence
          Length = 1145

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || ||||||||||||||||||||||| ||  | |||||||  
Sbjct: 458 gacttcatcaagtttgatgttggcaacgtcgtcatggtgactgggggaaggaacactgcc 399

                             
Query: 61  cgtgttggtgtgatcaag 78
           ||||| ||||| ||||||
Sbjct: 398 cgtgtgggtgttatcaag 381
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>gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds
          Length = 1037

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || |||||||| |||||||||||||| ||  | |||||||| 
Sbjct: 582 gacttcatcaagtttgatgttggcaacgttgtcatggtgactggcggaaggaacactggc 641

                             
Query: 61  cgtgttggtgtgatcaag 78
           ||||| ||||| ||||||
Sbjct: 642 cgtgtgggtgttatcaag 659
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1      gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
              ||||||||||||||||| || ||||| || |||||||||||||| ||  | ||||| || 
Sbjct: 317247 gacttcatcaagtttgatgttggcaatgttgtcatggtgactggaggaaggaacacaggc 317188

                                
Query: 61     cgtgttggtgtgatcaag 78
              ||||||||||||||||||
Sbjct: 317187 cgtgttggtgtgatcaag 317170
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>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
             ||||||||||||||||| || ||||| || |||||||||||||| ||  | ||||| || 
Sbjct: 46031 gacttcatcaagtttgatgttggcaatgttgtcatggtgactggaggaaggaacacaggc 45972

                               
Query: 61    cgtgttggtgtgatcaag 78
             ||||||||||||||||||
Sbjct: 45971 cgtgttggtgtgatcaag 45954
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>dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B09, full
           insert sequence
          Length = 1016

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || ||||| || |||||||||||||| ||  | ||||| || 
Sbjct: 606 gacttcatcaagtttgatgttggcaatgttgtcatggtgactggaggaaggaacacaggc 665

                             
Query: 61  cgtgttggtgtgatcaag 78
           ||||||||||||||||||
Sbjct: 666 cgtgttggtgtgatcaag 683
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>dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093E13, full
           insert sequence
          Length = 1157

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || ||||| || |||||||||||||| ||  | ||||| || 
Sbjct: 610 gacttcatcaagtttgatgttggcaatgttgtcatggtgactggaggaaggaacacaggc 669

                             
Query: 61  cgtgttggtgtgatcaag 78
           ||||||||||||||||||
Sbjct: 670 cgtgttggtgtgatcaag 687
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>dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D06, full
           insert sequence
          Length = 1079

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || ||||| || |||||||||||||| ||  | ||||| || 
Sbjct: 602 gacttcatcaagtttgatgttggcaatgttgtcatggtgactggaggaaggaacacaggc 661

                             
Query: 61  cgtgttggtgtgatcaag 78
           ||||||||||||||||||
Sbjct: 662 cgtgttggtgtgatcaag 679
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>gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps4) mRNA, complete cds
          Length = 1013

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || ||||||||||||||||||||||| ||  | |||||||| 
Sbjct: 584 gacttcatcaagtttgatgttggcaacgtcgtcatggtgactggcggaaggaacactggc 643

                             
Query: 61  cgtgttggtgtgatcaag 78
           || || ||||| ||||||
Sbjct: 644 cgcgtgggtgttatcaag 661
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>ref|XM_388890.1| Gibberella zeae PH-1 chromosome 2 conserved hypothetical protein
           (FG08714.1) partial mRNA
          Length = 732

 Score = 63.9 bits (32), Expect = 6e-08
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           |||||||||||||| |||  ||||  |||||||||||| |||||||| |||||||  || 
Sbjct: 457 gacttcatcaagttcgacaccggcgccgtcgtcatggtcactggtggtcgcaacatgggt 516

                           
Query: 61  cgtgttggtgtgatca 76
           ||||||||||| ||||
Sbjct: 517 cgtgttggtgtcatca 532
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>ref|XM_475130.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 738

 Score = 60.0 bits (30), Expect = 9e-07
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || || ||| |||| |||||||| |||||| | ||||| |||
Sbjct: 457 gacttcatcaagtttgatgttggaaacatcgtgatggtgaccggtgggaggaacacgggg 516

                             
Query: 61  cgtgttggtgtgatcaag 78
           || || || |||||||||
Sbjct: 517 cgcgtcggggtgatcaag 534
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>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
             complete sequence
          Length = 159932

 Score = 60.0 bits (30), Expect = 9e-07
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1     gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
             ||||||||||||||||| || || ||| |||| |||||||| |||||| | ||||| |||
Sbjct: 80782 gacttcatcaagtttgatgttggaaacatcgtgatggtgaccggtgggaggaacacgggg 80841

                               
Query: 61    cgtgttggtgtgatcaag 78
             || || || |||||||||
Sbjct: 80842 cgcgtcggggtgatcaag 80859
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 9e-07
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1        gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
                ||||||||||||||||| || || ||| |||| |||||||| |||||| | ||||| |||
Sbjct: 17550977 gacttcatcaagtttgatgttggaaacatcgtgatggtgaccggtgggaggaacacgggg 17551036

                                  
Query: 61       cgtgttggtgtgatcaag 78
                || || || |||||||||
Sbjct: 17551037 cgcgtcggggtgatcaag 17551054
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>dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123J20, full
           insert sequence
          Length = 1162

 Score = 60.0 bits (30), Expect = 9e-07
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || || ||| |||| |||||||| |||||| | ||||| |||
Sbjct: 609 gacttcatcaagtttgatgttggaaacatcgtgatggtgaccggtgggaggaacacgggg 668

                             
Query: 61  cgtgttggtgtgatcaag 78
           || || || |||||||||
Sbjct: 669 cgcgtcggggtgatcaag 686
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>ref|NM_193994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 768

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || ||||| ||||| ||||| || || ||| | |||||||| 
Sbjct: 481 gacttcatcaagtttgatgtgggcaatgtcgttatggtcacaggagggaggaacactggt 540

                   
Query: 61  cgtgttgg 68
           ||||||||
Sbjct: 541 cgtgttgg 548
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                            
Query: 1        gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
                ||||||||||||||||| || ||||| ||||| ||||| || || ||| | |||||||| 
Sbjct: 14497692 gacttcatcaagtttgatgtgggcaatgtcgttatggtcacaggagggaggaacactggt 14497751

                        
Query: 61       cgtgttgg 68
                ||||||||
Sbjct: 14497752 cgtgttgg 14497759
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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1     gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
             ||||||||||||||||| || ||||| ||||| ||||| || || ||| | |||||||| 
Sbjct: 57005 gacttcatcaagtttgatgtgggcaatgtcgttatggtcacaggagggaggaacactggt 57064

                     
Query: 61    cgtgttgg 68
             ||||||||
Sbjct: 57065 cgtgttgg 57072
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>dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C06, full
           insert sequence
          Length = 1035

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactggg 60
           ||||||||||||||||| || ||||| ||||| ||||| || || ||| | |||||||| 
Sbjct: 598 gacttcatcaagtttgatgtgggcaatgtcgttatggtcacaggagggaggaacactggt 657

                   
Query: 61  cgtgttgg 68
           ||||||||
Sbjct: 658 cgtgttgg 665
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>ref|NM_001036769.1| Arabidopsis thaliana structural constituent of ribosome AT5G07090
           transcript variant AT5G07090.2 mRNA, complete cds
          Length = 1174

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 626 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 685

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 686 gtgggtgtgat 696
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>ref|NM_120791.2| Arabidopsis thaliana structural constituent of ribosome AT5G07090
           transcript variant AT5G07090.1 mRNA, complete cds
          Length = 1088

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 541 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 600

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 601 gtgggtgtgat 611
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>gb|BT018605.1| Zea mays clone EL01N0450E04.d mRNA sequence
          Length = 1698

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 11   agtttgacgtcggcaacgtcgtcatggtgac 41
            ||||||||||||||||||| |||||||||||
Sbjct: 1326 agtttgacgtcggcaacgtggtcatggtgac 1356
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>gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090)
           mRNA, complete cds
          Length = 820

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 514 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 573

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 574 gtgggtgtgat 584
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>gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090)
           mRNA, complete cds
          Length = 1059

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 538 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 597

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 598 gtgggtgtgat 608
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>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA
            project)
          Length = 104607

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 4    ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
            ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 7783 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 7842

                       
Query: 64   gttggtgtgat 74
            || ||||||||
Sbjct: 7843 gtgggtgtgat 7853
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>gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds
          Length = 789

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 514 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 573

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 574 gtgggtgtgat 584
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>gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds
          Length = 1008

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 538 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 597

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 598 gtgggtgtgat 608
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>emb|BX824247.1|CNS0A6X1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH32ZH05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1168

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 467 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 408

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 407 gtgggtgtgat 397
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>emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH87ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 976

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 508 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 567

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 568 gtgggtgtgat 578
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>emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 942

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 512 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 571

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 572 gtgggtgtgat 582
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>emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 952

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 501 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 560

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 561 gtgggtgtgat 571
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>emb|BX832253.1|CNS09ZUO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZB04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 945

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 512 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 571

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 572 gtgggtgtgat 582
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>gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete sequence
          Length = 1011

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 541 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 600

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 601 gtgggtgtgat 611
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>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9
          Length = 86380

 Score = 54.0 bits (27), Expect = 5e-05
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                         
Query: 4     ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
             ||||||||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 82506 ttcatcaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagagggcgt 82565

                        
Query: 64    gttggtgtgat 74
             || ||||||||
Sbjct: 82566 gtgggtgtgat 82576
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>ref|NM_127291.2| Arabidopsis thaliana structural constituent of ribosome AT2G17360
           mRNA, complete cds
          Length = 1074

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 627 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 686

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 687 gttggtgtgat 697
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>gb|AY062983.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360)
           mRNA, complete cds
          Length = 817

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 514 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 573

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 574 gttggtgtgat 584
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>gb|AY035131.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360)
           mRNA, complete cds
          Length = 1032

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 586 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 645

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 646 gttggtgtgat 656
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>gb|AY064625.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 813

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 514 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 573

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 574 gttggtgtgat 584
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>gb|AF370469.1|AF370469 Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1034

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 587 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 646

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 647 gttggtgtgat 657
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>emb|BX820506.1|CNS0A8QA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH41ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1000

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 572 ttcattaagtttgatgtgggcaacgtagttatggtaactggaggaagaaacagagggcgt 631

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 632 gttggtgtgat 642
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>emb|BX818868.1|CNS0A8UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZB04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1007

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 579 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 638

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 639 gttggtgtgat 649
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>emb|BX818793.1|CNS0A8YY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB13ZG07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 966

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 579 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 638

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 639 gttggtgtgat 649
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>emb|BX833645.1|CNS0A1VP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL68ZB07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 984

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||||||||||||||| || ||||| || |||||||| || ||  | ||||  ||||||
Sbjct: 512 ttcatcaagtttgacgtgggtaacgttgtgatggtgaccggaggcagaaacagagggcgt 571

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 572 gtgggtgtgat 582
to top
>emb|BX831856.1|CNS09ZNQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH34ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 934

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| ||||||||||| || ||||| || ||||||||||| ||  | ||||  ||||||
Sbjct: 512 ttcatgaagtttgacgtgggtaacgttgtgatggtgactggaggcagaaacagcgggcgt 571

                      
Query: 64  gttggtgtgat 74
           || ||||||||
Sbjct: 572 gtgggtgtgat 582
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>gb|AY084230.1| Arabidopsis thaliana clone 10042 mRNA, complete sequence
          Length = 1023

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 627 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 686

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 687 gttggtgtgat 697
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>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete
             sequence. Sequence from clones T23A1, F5J6, MJB20
          Length = 76170

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 4     ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
             ||||| |||||||| || |||||||| || ||||| ||||| ||  | ||||  ||||||
Sbjct: 48683 ttcattaagtttgatgtgggcaacgtagttatggtcactggaggaagaaacagagggcgt 48742

                        
Query: 64    gttggtgtgat 74
             |||||||||||
Sbjct: 48743 gttggtgtgat 48753
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>gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4 (RPS4) mRNA, complete cds
          Length = 1086

 Score = 46.1 bits (23), Expect = 0.013
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgg 47
           |||||||| |||||||| || || || || |||||||||||||||||
Sbjct: 545 gacttcattaagtttgatgttggaaatgttgtcatggtgactggtgg 591
to top
>dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJG14
          Length = 86121

 Score = 42.1 bits (21), Expect = 0.20
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    gggcgtgttggtgtgatcaag 78
             |||||||||||||||||||||
Sbjct: 15683 gggcgtgttggtgtgatcaag 15663
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>emb|X76651.1|STRPS4 S.tuberosum (Desiree) mRNA for ribosomal protein S4
          Length = 966

 Score = 42.1 bits (21), Expect = 0.20
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactgg 44
           ||||||||||||||||| || || || || |||||||||||
Sbjct: 563 ttcatcaagtttgacgttgggaatgttgtgatggtgactgg 603
to top
>gb|DQ268839.1| Solanum tuberosum clone 130D11 40S ribosomal protein S4-like
           protein mRNA, complete cds
          Length = 1052

 Score = 42.1 bits (21), Expect = 0.20
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactgg 44
           ||||||||||||||||| || || || || |||||||||||
Sbjct: 546 ttcatcaagtttgacgttgggaatgttgtgatggtgactgg 586
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>gb|AF359361.3| Gibberella zeae strain GZ3639 trichothecene gene cluster, complete
             sequence
          Length = 57840

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gcaacactgggcgtgttggt 69
             ||||||||||||||||||||
Sbjct: 18300 gcaacactgggcgtgttggt 18319
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>ref|XM_383708.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03532.1)
           partial mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  gcaacactgggcgtgttggt 69
           ||||||||||||||||||||
Sbjct: 593 gcaacactgggcgtgttggt 574
to top
>gb|AF336366.2| Gibberella zeae H-11 trichothecene biosynthesis gene cluster,
           complete sequence
          Length = 27022

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  gcaacactgggcgtgttggt 69
           ||||||||||||||||||||
Sbjct: 753 gcaacactgggcgtgttggt 772
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>gb|AY857461.1| Suberites domuncula S4 mRNA, complete cds
          Length = 786

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 7   atcaagtttgacgtcggcaacgtcgtcatggt 38
           |||||||||||  |||||||| ||||||||||
Sbjct: 517 atcaagtttgatatcggcaacctcgtcatggt 548
to top
>dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, complete cds
          Length = 1105

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 31  gtcatggtgactggtgggcgcaacactgggcgtgttggtgtgatcaag 78
           |||||||||||||| ||| | || |||||||| ||||| || ||||||
Sbjct: 628 gtcatggtgactggggggaggaatactgggcgagttggagttatcaag 675
to top
>ref|NM_125228.3| Arabidopsis thaliana structural constituent of ribosome AT5G58420
           mRNA, complete cds
          Length = 1080

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 607 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 666

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 667 gttggtgtgat 677
to top
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                      
Query: 6       catcaagtttgacgtcggcaacgtcgtcatggtgactgg 44
               ||||||||||||   ||| |||||||||||||| |||||
Sbjct: 1677468 catcaagtttgagcccggaaacgtcgtcatggttactgg 1677506
to top
>gb|BT014201.1| Lycopersicon esculentum clone 133378R, mRNA sequence
          Length = 1292

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 40/47 (85%)
 Strand = Plus / Plus

                                                          
Query: 1   gacttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgg 47
           ||||||||||||||||| || || || || || ||| ||||||||||
Sbjct: 591 gacttcatcaagtttgatgttggtaatgtggttatgttgactggtgg 637
to top
>ref|XM_567206.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNA06200) partial mRNA
          Length = 840

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 6   catcaagtttgacgtcggcaacgtcgtcatggtgactgg 44
           ||||||||||||   ||| |||||||||||||| |||||
Sbjct: 516 catcaagtttgagcccggaaacgtcgtcatggttactgg 554
to top
>gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, complete cds
          Length = 789

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 514 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 573

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 574 gttggtgtgat 584
to top
>gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds
          Length = 995

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 587 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 646

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 647 gttggtgtgat 657
to top
>gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds
          Length = 1005

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 598 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 657

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 658 gttggtgtgat 668
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>emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH62ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 978

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 608 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 667

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 668 gttggtgtgat 678
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>emb|BX832133.1|CNS09ZP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH53ZH10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 537

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 127 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 186

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 187 gttggtgtgat 197
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>emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB70ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 988

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 578 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 637

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 638 gttggtgtgat 648
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>emb|BX830139.1|CNS09ZZ0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB61ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 737

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 327 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 386

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 387 gttggtgtgat 397
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>emb|BX829418.1|CNS09ZZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB12ZD07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 566

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 156 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 215

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 216 gttggtgtgat 226
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>emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZG11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 997

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 587 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 646

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 647 gttggtgtgat 657
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>gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete sequence
          Length = 1010

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
           |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 602 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 661

                      
Query: 64  gttggtgtgat 74
           |||||||||||
Sbjct: 662 gttggtgtgat 672
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>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2
          Length = 51440

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                        
Query: 4    ttcatcaagtttgacgtcggcaacgtcgtcatggtgactggtgggcgcaacactgggcgt 63
            |||||||||||||| || ||||| || || ||||| || || ||  | ||||  ||||||
Sbjct: 6659 ttcatcaagtttgatgttggcaatgttgtgatggttacaggaggtagaaacagagggcgt 6718

                       
Query: 64   gttggtgtgat 74
            |||||||||||
Sbjct: 6719 gttggtgtgat 6729
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>emb|X79300.1|GHRS4E G.hirsutum (DPL 62) mRNA for ribosomal protein small subunit 4e
          Length = 1090

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                              
Query: 4   ttcatcaagtttgacgtcggcaacgtcgtcatggt 38
           ||||||||||||||||| || || || ||||||||
Sbjct: 569 ttcatcaagtttgacgttgggaatgttgtcatggt 603


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 396,231
Number of Sequences: 3902068
Number of extensions: 396231
Number of successful extensions: 27642
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 27559
Number of HSP's gapped (non-prelim): 92
length of query: 78
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 57
effective length of database: 17,151,101,840
effective search space: 977612804880
effective search space used: 977612804880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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