Clone Information

BLAST Search Result

Clone Name	bags5p14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GDIB_HUMAN (P50395) Rab GDP dissociation inhibitor beta (Rab GDI...	259	4e-69
2	GDIB_BOVIN (P50397) Rab GDP dissociation inhibitor beta (Rab GDI...	259	5e-69
3	GDIA_PANTR (P60028) Rab GDP dissociation inhibitor alpha (Rab GD...	259	6e-69
4	GDIA_MOUSE (P50396) Rab GDP dissociation inhibitor alpha (Rab GD...	259	6e-69
5	GDIA_HUMAN (P31150) Rab GDP dissociation inhibitor alpha (Rab GD...	259	6e-69
6	GDIB_PONPY (Q5RCE1) Rab GDP dissociation inhibitor beta (Rab GDI...	258	8e-69
7	GDIA_RAT (P50398) Rab GDP dissociation inhibitor alpha (Rab GDI ...	258	8e-69
8	GDIA_PONPY (Q7YQM0) Rab GDP dissociation inhibitor alpha (Rab GD...	258	8e-69
9	GDIA_MACFA (Q8HXX7) Rab GDP dissociation inhibitor alpha (Rab GD...	258	8e-69
10	GDIA_BOVIN (P21856) Rab GDP dissociation inhibitor alpha (Rab GD...	258	8e-69
11	GDIB_MOUSE (Q61598) Rab GDP dissociation inhibitor beta (Rab GDI...	258	1e-68
12	GDIB_PIG (Q6Q7J2) Rab GDP dissociation inhibitor beta (Rab GDI b...	258	1e-68
13	GDIA_CANFA (O97555) Rab GDP dissociation inhibitor alpha (Rab GD...	258	1e-68
14	GDIB_CANFA (O97556) Rab GDP dissociation inhibitor beta (Rab GDI...	256	3e-68
15	GDIB_RAT (P50399) Rab GDP dissociation inhibitor beta (Rab GDI b...	244	2e-64
16	GDI1_YEAST (P39958) Rab GDP-dissociation inhibitor (Rab GDI) (Se...	240	3e-63
17	GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation ...	239	4e-63
18	RAE2_MOUSE (Q9QZD5) Rab proteins geranylgeranyltransferase compo...	105	1e-22
19	RAE2_HUMAN (P26374) Rab proteins geranylgeranyltransferase compo...	103	6e-22
20	RAE1_MOUSE (Q9QXG2) Rab proteins geranylgeranyltransferase compo...	101	2e-21
21	RAE1_HUMAN (P24386) Rab proteins geranylgeranyltransferase compo...	99	8e-21
22	RABEP_DROME (Q9V8W3) Rab proteins geranylgeranyltransferase comp...	98	2e-20
23	RAE1_RAT (P37727) Rab proteins geranylgeranyltransferase compone...	97	4e-20
24	RAEP_YEAST (P32864) Rab proteins geranylgeranyltransferase compo...	58	3e-08
25	RAEP_CANAL (O93831) Rab proteins geranylgeranyltransferase compo...	55	2e-07
26	CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2...	40	0.008
27	CP3A6_RABIT (P11707) Cytochrome P450 3A6 (EC 1.14.14.1) (CYPIIIA...	36	0.11
28	FAS1_YARLI (P34229) Fatty acid synthase beta subunit (EC 2.3.1.8...	32	1.2
29	VG12_ICHV1 (Q00165) Hypothetical gene 12 zinc-binding protein	32	2.1
30	CAD3_CAEEL (P34616) Cadherin-3 precursor	31	2.7
31	CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor...	30	4.7
32	CP3A1_RAT (P04800) Cytochrome P450 3A1 (EC 1.14.14.1) (CYPIIIA1)...	30	6.1
33	CP3A7_HUMAN (P24462) Cytochrome P450 3A7 (EC 1.14.14.1) (CYPIIIA...	30	8.0

>GDIB_HUMAN (P50395) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  259 bits (663), Expect = 4e-69
 Identities = 120/204 (58%), Positives = 159/204 (77%)
 Frame = +2

Query: 5   LWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVF 184
           L+K+F+    PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK  +GS+V+
Sbjct: 52  LYKRFKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVY 111

Query: 185 SKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTREL 364
             GKI+KVP+T+ EAL S LMG+FEKRR R F +YV ++++ DP+T +G+D  + T R++
Sbjct: 112 KGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDV 171

Query: 365 IAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYG 544
             K  L  D IDF GHALAL+R D YL +P  +T+ R+KLYSESLAR+ G SPY+YPLYG
Sbjct: 172 YKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYG 230

Query: 545 LGELPQAFARLSAVYGGTYMLNKP 616
           LGELPQ FARLSA+YGGTYMLNKP
Sbjct: 231 LGELPQGFARLSAIYGGTYMLNKP 254

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>GDIB_BOVIN (P50397) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  259 bits (662), Expect = 5e-69
 Identities = 121/204 (59%), Positives = 159/204 (77%)
 Frame = +2

Query: 5   LWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVF 184
           L+K+F+    PPA +G  RD+NVD++PKF+MANG LV+ L+ T+VT+YL FK  +GS+V+
Sbjct: 52  LYKRFKIPGAPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVY 111

Query: 185 SKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTREL 364
             GKI+KVP+T+ EAL S LMG+FEKRR R F +YV ++++ DP+T +G+D  + + RE+
Sbjct: 112 KGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREV 171

Query: 365 IAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYG 544
             K  L  D IDF GHALAL+R D YL +P  +T+ R+KLYSESLAR+ G SPY+YPLYG
Sbjct: 172 YKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYG 230

Query: 545 LGELPQAFARLSAVYGGTYMLNKP 616
           LGELPQ FARLSA+YGGTYMLNKP
Sbjct: 231 LGELPQGFARLSAIYGGTYMLNKP 254

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>GDIA_PANTR (P60028) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  259 bits (661), Expect = 6e-69
 Identities = 122/205 (59%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           +L+K+F+  + PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V
Sbjct: 51  ELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFV 110

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  GKI+KVP+T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D    + R+
Sbjct: 111 YKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRD 170

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K  L  D IDF GHALAL+R D YL +P L+TV R+KLYSESLAR+ G SPY+YPLY
Sbjct: 171 VYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLY 229

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 230 GLGELPQGFARLSAIYGGTYMLNKP 254

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>GDIA_MOUSE (P50396) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  259 bits (661), Expect = 6e-69
 Identities = 121/205 (59%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           +L+K+F+  + PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V
Sbjct: 51  ELYKRFQILEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFV 110

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  GKI+KVP+T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D    + R+
Sbjct: 111 YKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRD 170

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K  L  D IDF GHALAL+R D YL +P L+T+ R+KLYSESLAR+ G SPY+YPLY
Sbjct: 171 VYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLY 229

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 230 GLGELPQGFARLSAIYGGTYMLNKP 254

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>GDIA_HUMAN (P31150) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
           (XAP-4) (Oligophrenin-2)
          Length = 447

 Score =  259 bits (661), Expect = 6e-69
 Identities = 122/205 (59%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           +L+K+F+  + PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V
Sbjct: 51  ELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFV 110

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  GKI+KVP+T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D    + R+
Sbjct: 111 YKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRD 170

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K  L  D IDF GHALAL+R D YL +P L+TV R+KLYSESLAR+ G SPY+YPLY
Sbjct: 171 VYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLY 229

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 230 GLGELPQGFARLSAIYGGTYMLNKP 254

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>GDIB_PONPY (Q5RCE1) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  258 bits (660), Expect = 8e-69
 Identities = 119/204 (58%), Positives = 159/204 (77%)
 Frame = +2

Query: 5   LWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVF 184
           L+K+++    PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK  +GS+V+
Sbjct: 52  LYKRYKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVY 111

Query: 185 SKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTREL 364
             GKI+KVP+T+ EAL S LMG+FEKRR R F +YV ++++ DP+T +G+D  + T R++
Sbjct: 112 KGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDV 171

Query: 365 IAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYG 544
             K  L  D IDF GHALAL+R D YL +P  +T+ R+KLYSESLAR+ G SPY+YPLYG
Sbjct: 172 YKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYG 230

Query: 545 LGELPQAFARLSAVYGGTYMLNKP 616
           LGELPQ FARLSA+YGGTYMLNKP
Sbjct: 231 LGELPQGFARLSAIYGGTYMLNKP 254

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>GDIA_RAT (P50398) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  258 bits (660), Expect = 8e-69
 Identities = 121/205 (59%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           +L+K+F+  + PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V
Sbjct: 51  ELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFV 110

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  GKI+KVP+T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D    + R+
Sbjct: 111 YKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRD 170

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K  L  D IDF GHALAL+R D YL +P L+T+ R+KLYSESLAR+ G SPY+YPLY
Sbjct: 171 VYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLY 229

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 230 GLGELPQGFARLSAIYGGTYMLNKP 254

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>GDIA_PONPY (Q7YQM0) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  258 bits (660), Expect = 8e-69
 Identities = 121/205 (59%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           +L+K+F+  + PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V
Sbjct: 51  ELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFV 110

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  GKI+KVP+T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D    + R+
Sbjct: 111 YKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRD 170

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K  L  D IDF GHALAL+R D YL +P L+T+ R+KLYSESLAR+ G SPY+YPLY
Sbjct: 171 VYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLY 229

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 230 GLGELPQGFARLSAIYGGTYMLNKP 254

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>GDIA_MACFA (Q8HXX7) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  258 bits (660), Expect = 8e-69
 Identities = 121/205 (59%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           +L+K+F+  + PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V
Sbjct: 51  ELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFV 110

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  GKI+KVP+T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D    + R+
Sbjct: 111 YKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRD 170

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K  L  D IDF GHALAL+R D YL +P L+T+ R+KLYSESLAR+ G SPY+YPLY
Sbjct: 171 VYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLY 229

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 230 GLGELPQGFARLSAIYGGTYMLNKP 254

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>GDIA_BOVIN (P21856) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
           (SMG p25A GDI)
          Length = 447

 Score =  258 bits (660), Expect = 8e-69
 Identities = 121/205 (59%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           +L+K+F+  + PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V
Sbjct: 51  ELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFV 110

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  GKI+KVP+T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D    + R+
Sbjct: 111 YKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRD 170

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K  L  D IDF GHALAL+R D YL +P L+T+ R+KLYSESLAR+ G SPY+YPLY
Sbjct: 171 VYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLY 229

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 230 GLGELPQGFARLSAIYGGTYMLNKP 254

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>GDIB_MOUSE (Q61598) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
           (GDI-3)
          Length = 445

 Score =  258 bits (659), Expect = 1e-68
 Identities = 118/204 (57%), Positives = 161/204 (78%)
 Frame = +2

Query: 5   LWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVF 184
           L+K+F+   +PPA +G  RD+NVD++PKF+MANG LV+ L+ T+VT+Y+ FK ++GS+V+
Sbjct: 52  LYKRFKLPGQPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVY 111

Query: 185 SKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTREL 364
             GKI+KVP+T+ EAL S LMG+FEKRR R F +YV ++++ DP+T +G+D  + + R++
Sbjct: 112 KGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDV 171

Query: 365 IAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYG 544
             K  L  D IDF GH+LAL+R D YL +P  +T+ R+KLYSESLAR+ G SPY+YPLYG
Sbjct: 172 YKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYG 230

Query: 545 LGELPQAFARLSAVYGGTYMLNKP 616
           LGELPQ FARLSA+YGGTYMLNKP
Sbjct: 231 LGELPQGFARLSAIYGGTYMLNKP 254

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>GDIB_PIG (Q6Q7J2) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  258 bits (658), Expect = 1e-68
 Identities = 121/204 (59%), Positives = 157/204 (76%)
 Frame = +2

Query: 5   LWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVF 184
           L+K+F     PPA +G  RD+NVD++PKF+MANG LV+ L+ T+VT+YL FK  +GS+V+
Sbjct: 52  LYKRFNIPGAPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVY 111

Query: 185 SKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTREL 364
             GKI+KVP+T+ EAL S LMG+FEKRR R F +YV ++++ DP+T +G+D  +   RE+
Sbjct: 112 KGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREV 171

Query: 365 IAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYG 544
             K  L  D IDF GHALAL+R D YL +P  +T+ R+KLYSESLAR+ G SPY+YPLYG
Sbjct: 172 YKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYG 230

Query: 545 LGELPQAFARLSAVYGGTYMLNKP 616
           LGELPQ FARLSA+YGGTYMLNKP
Sbjct: 231 LGELPQGFARLSAIYGGTYMLNKP 254

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>GDIA_CANFA (O97555) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  258 bits (658), Expect = 1e-68
 Identities = 120/205 (58%), Positives = 162/205 (79%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           +L+K+F+  + PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS++
Sbjct: 51  ELYKRFQLLEGPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFI 110

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  GKI+KVP+T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D    + R+
Sbjct: 111 YKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRD 170

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K  L  D IDF GHALAL+R D YL +P L+T+ R+KLYSESLAR+ G SPY+YPLY
Sbjct: 171 VYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLY 229

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 230 GLGELPQGFARLSAIYGGTYMLNKP 254

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>GDIB_CANFA (O97556) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  256 bits (655), Expect = 3e-68
 Identities = 119/204 (58%), Positives = 158/204 (77%)
 Frame = +2

Query: 5   LWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVF 184
           L+K+F+    PPA +G  RD+N+D++PKF+MANG LV+ L++T+VT+YL FK  +GS+V+
Sbjct: 52  LYKRFKIPGAPPASMGRGRDWNLDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVY 111

Query: 185 SKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTREL 364
             GKI+KVP+T+ EAL S LMG+FEKRR R F +YV ++++ DP+T +G+D  +    E+
Sbjct: 112 KGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEV 171

Query: 365 IAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYG 544
             K  L  D IDF GHALAL+R D YL +P  +T+ R+KLYSESLAR+ G SPY+YPLYG
Sbjct: 172 YKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYG 230

Query: 545 LGELPQAFARLSAVYGGTYMLNKP 616
           LGELPQ FARLSA+YGGTYMLNKP
Sbjct: 231 LGELPQGFARLSAIYGGTYMLNKP 254

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>GDIB_RAT (P50399) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
           (GDI-3)
          Length = 445

 Score =  244 bits (622), Expect = 2e-64
 Identities = 112/204 (54%), Positives = 155/204 (75%)
 Frame = +2

Query: 5   LWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVF 184
           L+K+F+   +PPA +G  RD+NVD++PKF+MANG LV+ L+ T+VT+Y+ FK ++GS+V+
Sbjct: 52  LYKRFKLPGQPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVY 111

Query: 185 SKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTREL 364
             GKI+KVP+T+ EAL S LMG+FEKRR R F +YV ++++ DP+T +G+D  + + R++
Sbjct: 112 KGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDV 171

Query: 365 IAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYG 544
             K  L  D IDF GH+LAL+R D YL +P  + +  +  YSESLAR+ G SPY+YPLYG
Sbjct: 172 YKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCERLTELNFYSESLARY-GKSPYLYPLYG 230

Query: 545 LGELPQAFARLSAVYGGTYMLNKP 616
             ELPQ FARLSA+YGGTYMLNKP
Sbjct: 231 PWELPQGFARLSAIYGGTYMLNKP 254

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>GDI1_YEAST (P39958) Rab GDP-dissociation inhibitor (Rab GDI) (Secretory|
           pathway GDP dissociation inhibitor)
          Length = 451

 Score =  240 bits (612), Expect = 3e-63
 Identities = 116/209 (55%), Positives = 155/209 (74%), Gaps = 4/209 (1%)
 Frame = +2

Query: 2   QLWKKFR----GEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVD 169
           QL++KF+     +++  +  G  RD+NVD++PKF+MANG L   LIHTDVT+Y+ FK V 
Sbjct: 55  QLYEKFKQNPISKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVS 114

Query: 170 GSYVFSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRM 349
           GSYVF +GKI+KVPA ++EA+ SPLMGIFEKRR + F  ++  Y + D  THQGLDL + 
Sbjct: 115 GSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKN 174

Query: 350 TTRELIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYI 529
           T  E+  K GL + T +FIGHA+AL  +D YL +PA  + +R+ LY +S+AR+ G SPY+
Sbjct: 175 TMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYL 233

Query: 530 YPLYGLGELPQAFARLSAVYGGTYMLNKP 616
           YP+YGLGELPQ FARLSA+YGGTYML+ P
Sbjct: 234 YPMYGLGELPQGFARLSAIYGGTYMLDTP 262

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>GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation inhibitor 1|
          Length = 440

 Score =  239 bits (611), Expect = 4e-63
 Identities = 116/205 (56%), Positives = 152/205 (74%)
 Frame = +2

Query: 2   QLWKKFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYV 181
           QL+  FR  ++ P  LG  RD+ VD+VPKF+MANG L   LI+TDVT+Y+ FK + GSYV
Sbjct: 50  QLYALFRPGEQRPESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYV 109

Query: 182 FSKGKIHKVPATDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRE 361
           +  G+I KVP  +MEALKSPLM +FEKRRA+ F  +V +Y + DP T++ +++ R +   
Sbjct: 110 YRDGRIAKVPGNEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMES 169

Query: 362 LIAKHGLSDDTIDFIGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY 541
           +  K GL   T DFIGHA+AL+ DD YL +PA +T +R+ LY+ S+A+F G SPYIYPLY
Sbjct: 170 VFKKFGLQSGTQDFIGHAMALYLDDAYLKKPARETRERILLYASSIAKF-GKSPYIYPLY 228

Query: 542 GLGELPQAFARLSAVYGGTYMLNKP 616
           GLGELPQ FARLSA+YGGTYMLN+P
Sbjct: 229 GLGELPQGFARLSAIYGGTYMLNQP 253

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>RAE2_MOUSE (Q9QZD5) Rab proteins geranylgeranyltransferase component A 2 (Rab|
           escort protein 2) (REP-2) (Choroideraemia-like protein)
          Length = 621

 Score =  105 bits (261), Expect = 1e-22
 Identities = 62/192 (32%), Positives = 106/192 (55%), Gaps = 1/192 (0%)
 Frame = +2

Query: 56  SRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALK 235
           SR +N+D+V K + + G+L+  LI ++V++Y  FK V     F +GK+ +VP +  +   
Sbjct: 225 SRRFNIDLVSKPLYSQGSLIDLLIKSNVSRYAEFKNVTRILAFWEGKVEQVPCSRADVFN 284

Query: 236 SPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELIAKHGLSDDTIDFIGHA 415
           S  + + EKR    F  +  DY   +  + +  D  + +  + +    L+ +   FI H+
Sbjct: 285 SKELSMVEKRMLMKFLTFCLDY---EQHSDEYQDFKQCSFSDYLKTKKLTPNLQHFILHS 341

Query: 416 LALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 595
           +A+  +    S   LD ++  K + + L RF G +P+I+PLYG GE+PQ F R+ AV+GG
Sbjct: 342 IAMTSES---SCTTLDGLQATKNFLQCLGRF-GNTPFIFPLYGHGEIPQCFCRMCAVFGG 397

Query: 596 TYML-NKPECKV 628
            Y L +K +C V
Sbjct: 398 VYCLRHKVQCLV 409

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>RAE2_HUMAN (P26374) Rab proteins geranylgeranyltransferase component A 2 (Rab|
           escort protein 2) (REP-2) (Choroideraemia-like protein)
          Length = 656

 Score =  103 bits (256), Expect = 6e-22
 Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 1/191 (0%)
 Frame = +2

Query: 59  RDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKS 238
           R +N+D+V K + + G L+  LI +DV++Y+ FK V     F +GK+ +VP +  +   S
Sbjct: 227 RRFNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNS 286

Query: 239 PLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELIAKHGLSDDTIDFIGHAL 418
             + + EKR    F  +  +Y +  P  +Q     + +  E +    L+ +   F+ H++
Sbjct: 287 KELTMVEKRMLMKFLTFCLEY-EQHPDEYQA--FRQCSFSEYLKTKKLTPNLQHFVLHSI 343

Query: 419 ALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGT 598
           A+  +    S   +D +   K + + L RF G +P+++PLYG GE+PQ F R+ AV+GG 
Sbjct: 344 AMTSES---SCTTIDGLNATKNFLQCLGRF-GNTPFLFPLYGQGEIPQGFCRMCAVFGGI 399

Query: 599 YML-NKPECKV 628
           Y L +K +C V
Sbjct: 400 YCLRHKVQCFV 410

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>RAE1_MOUSE (Q9QXG2) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein
           homolog)
          Length = 665

 Score =  101 bits (251), Expect = 2e-21
 Identities = 56/183 (30%), Positives = 99/183 (54%)
 Frame = +2

Query: 59  RDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKS 238
           R +N+D+V K + + G L+  LI ++V++Y  FK +     F +G + +VP +  +   S
Sbjct: 237 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNS 296

Query: 239 PLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELIAKHGLSDDTIDFIGHAL 418
             + + EKR    F  +  +Y D  P  ++  + T  T  E +    L+ +   F+ H++
Sbjct: 297 KQLTMVEKRMLMKFLTFCVEYED-HPDEYKAYEET--TFSEYLKTQKLTPNLQYFVLHSI 353

Query: 419 ALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGT 598
           A+  +    +   +D +K  K + + L R+ G +P+++PLYG GELPQ F R+ AV+GG 
Sbjct: 354 AMTSE---TTSSTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGI 409

Query: 599 YML 607
           Y L
Sbjct: 410 YCL 412

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>RAE1_HUMAN (P24386) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein) (TCD
           protein)
          Length = 653

 Score = 99.4 bits (246), Expect = 8e-21
 Identities = 54/183 (29%), Positives = 99/183 (54%)
 Frame = +2

Query: 59  RDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKS 238
           R +N+D+V K + + G L+  LI ++V++Y  FK +     F +G++ +VP +  +   S
Sbjct: 225 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNS 284

Query: 239 PLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELIAKHGLSDDTIDFIGHAL 418
             + + EKR    F  +  +Y +  P  ++G +   +T  E +    L+ +    + H++
Sbjct: 285 KQLTMVEKRMLMKFLTFCMEY-EKYPDEYKGYE--EITFYEYLKTQKLTPNLQYIVMHSI 341

Query: 419 ALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGT 598
           A+  +    +   +D +K  K +   L R+ G +P+++PLYG GELPQ F R+ AV+GG 
Sbjct: 342 AMTSE---TASSTIDGLKATKNFLHCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGI 397

Query: 599 YML 607
           Y L
Sbjct: 398 YCL 400

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>RABEP_DROME (Q9V8W3) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein homolog) (REP)
          Length = 511

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 59/197 (29%), Positives = 98/197 (49%)
 Frame = +2

Query: 47  LGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDME 226
           L  SR +++D+ P+ + A G LV+ LI +++ +Y  F+AVD   +   G+I  VP +  +
Sbjct: 96  LAKSRRFSLDLCPRILYAAGELVQLLIKSNICRYAEFRAVDHVCMRHNGEIVSVPCSRSD 155

Query: 227 ALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELIAKHGLSDDTIDFI 406
              +  + I EKR    F     DY + D      L+    T  E +    +++     +
Sbjct: 156 VFNTKTLTIVEKRLLMKFLTACNDYGE-DKCNEDSLEFRGRTFLEYLQAQRVTEKISSCV 214

Query: 407 GHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYGLGELPQAFARLSAV 586
             A+A+        E     ++R + +  SL R+ G +P+++P+YG GELPQ F RL AV
Sbjct: 215 MQAIAMCGPSTSFEE----GMQRTQRFLGSLGRY-GNTPFLFPMYGCGELPQCFCRLCAV 269

Query: 587 YGGTYMLNKPECKVEFD 637
           YGG Y L +    +  D
Sbjct: 270 YGGIYCLKRAVDDIALD 286

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>RAE1_RAT (P37727) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein
           homolog)
          Length = 650

 Score = 97.1 bits (240), Expect = 4e-20
 Identities = 54/183 (29%), Positives = 99/183 (54%)
 Frame = +2

Query: 59  RDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKS 238
           R +N+D+V + + + G L+  LI ++V++Y  FK +     F +G + +VP +  +   S
Sbjct: 222 RRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNS 281

Query: 239 PLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELIAKHGLSDDTIDFIGHAL 418
             + + EKR    F  +  +Y +  P  ++  + T  T  E +    L+ +   F+ H++
Sbjct: 282 KQLTMVEKRMLMKFLTFCVEYEE-HPDEYRAYEGT--TFSEYLKTQKLTPNLQYFVLHSI 338

Query: 419 ALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGT 598
           A+  +    +   +D +K  K + + L R+ G +P+++PLYG GELPQ F R+ AV+GG 
Sbjct: 339 AMTSE---TTSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGI 394

Query: 599 YML 607
           Y L
Sbjct: 395 YCL 397

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>RAEP_YEAST (P32864) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein) (REP)
          Length = 603

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
 Frame = +2

Query: 53  ASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEAL 232
           +SRD+ +D+ PK + A   L+  LI + V +YL F+++   + +      K+  T  E  
Sbjct: 125 SSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFEKLTNTKQEIF 184

Query: 233 KSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELIA-KHGLSDDTIDFIG 409
               + +  KR    F  +V ++   + +T         T  + +  K  L    +  + 
Sbjct: 185 TDQNLPLMTKRNLMKFIKFVLNW---EAQTEIWQPYAERTMSDFLGEKFKLEKPQVFELI 241

Query: 410 HALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLY-GLGELPQAFARLSAV 586
            ++ L  D   L+    + ++R++ Y  S   + G  P +   Y G GEL Q F R +AV
Sbjct: 242 FSIGLCYD---LNVKVPEALQRIRRYLTSFDVY-GPFPALCSKYGGPGELSQGFCRSAAV 297

Query: 587 YGGTYMLNK 613
            G TY LN+
Sbjct: 298 GGATYKLNE 306

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>RAEP_CANAL (O93831) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein) (REP)
          Length = 640

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
 Frame = +2

Query: 56  SRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKI-HKVPA-TDMEA 229
           S+DY +D+ PK M     L+  LI + V +YL F+++   +VF       KV A T  + 
Sbjct: 83  SKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFHVFENDDFQQKVNATTKQDI 142

Query: 230 LKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELIAKH--GLSDDTIDF 403
                + +  KR    F  ++      DP   Q +     T  ++  +    L +  I+ 
Sbjct: 143 FTDKSLSLMTKRYLMKFLKFLL----LDPDYKQRVKPYADTPIQVFLQQEFKLEEPQINE 198

Query: 404 IGHALALHRDDRYLSEPALDTVKRMKLYSESLARFQGGSPYIYPLYGLGELPQAFARLSA 583
           + +++ L   ++  ++ AL    RMK +  S   +      +    G GEL Q F R +A
Sbjct: 199 LVYSIGLSYKEQTSTKQAL---IRMKRFLSSFDVYGKFPCMVSKFGGPGELSQGFCRSAA 255

Query: 584 VYGGTYMLN 610
           V G TY LN
Sbjct: 256 VAGTTYKLN 264

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>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple|
            epidermal growth factor-like domains 3) (Fragment)
          Length = 2144

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
 Frame = -2

Query: 263  VSQICPSKGI---LEPPCQWQEPCESSLC*RHSFHQQL*KTDTSSHQCE*EYEPKFHSPS 93
            VS + PS+G    +EP C W +PC+S+ C  +S+       D  S+ C    +P ++  +
Sbjct: 999  VSSLDPSRGESINVEPGCSWPDPCDSNPCPTNSYC----SNDWDSYSC--SCDPGYYGDN 1052

Query: 92   *T----LEPCLHCSLC 57
             T    L PC H S C
Sbjct: 1053 CTNVCDLNPCEHQSAC 1068

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>CP3A6_RABIT (P11707) Cytochrome P450 3A6 (EC 1.14.14.1) (CYPIIIA6) (P450-3C)|
          Length = 501

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
 Frame = +2

Query: 215 TDMEALKSPLMGIFEKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELI---AKHGLS 385
           T +E +K   +   +KRR     + +   N  +  +H+ LD   +  + +I   A +  +
Sbjct: 249 TSVEKIKDDRLKDKQKRRVDFLQLMINSQNSKEIDSHKALDDIEVVAQSIIILFAGYETT 308

Query: 386 DDTIDFIGHALALHRDDRYLSEPALDTV 469
             T+ FI H LA H D +   +  +DT+
Sbjct: 309 SSTLSFIMHLLATHPDVQQKLQEEIDTL 336

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>FAS1_YARLI (P34229) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:|
            3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC
            4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH]
            (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase
            (EC 2.
          Length = 2086

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
 Frame = -3

Query: 268  STFLKYAHQRGF*SLHVSGRNLVNLPFAE--DIASIN-----SFERQILRHISVNESTNQ 110
            S+F+KY ++  F S+H +G+ L+ LP  E  +IA++N     S    ++ ++  N +T +
Sbjct: 1496 SSFIKYKNETVFSSVHTTGKVLMELPSKEVIEIATVNYQAGESHGNPVIDYLERNGTTIE 1555

Query: 109  SSIRHHK 89
              +   K
Sbjct: 1556 QPVEFEK 1562

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>VG12_ICHV1 (Q00165) Hypothetical gene 12 zinc-binding protein|
          Length = 299

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 61  RLQCRHGSKVYDGEWNFGSYSHSH*CDEVSVF 156
           RL C H  +V DGE+ FG  ++   CDE +VF
Sbjct: 11  RLSCGHPLRVPDGEFCFGDGAYCCDCDERAVF 42

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>CAD3_CAEEL (P34616) Cadherin-3 precursor|
          Length = 3343

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +2

Query: 104  GTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDME---ALKSPLMGIFEKRRAR 274
            GT+V  + ++D TKY       G  +  +G I      D E    LK+ ++   E  R  
Sbjct: 1294 GTVVGVVPNSDTTKYRLVDPTCGLLIDQEGIIRTTTVFDRENTSLLKTKMIEPSE-NRIW 1352

Query: 275  NFFIYVQDYNDADPK 319
            N  I++ D ND  PK
Sbjct: 1353 NLLIFIADVNDNKPK 1367

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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = -2

Query: 263  VSQICPSKGI---LEPPCQWQEPCESSLC*RHSFHQQL*KTDTSSHQCE*EYEPKFHSPS 93
            V  + PS+G    +EP C   +PC+S+ C  +S++      ++ S  C   Y     +  
Sbjct: 1775 VHSLDPSRGESINVEPGCSLPDPCDSNPCPTNSYYSN--DWNSYSCSCVLGYYGDNCTNV 1832

Query: 92   *TLEPCLHCSLC 57
              L PC H S+C
Sbjct: 1833 CDLNPCEHQSVC 1844

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>CP3A1_RAT (P04800) Cytochrome P450 3A1 (EC 1.14.14.1) (CYPIIIA1) (P450-PCN1)|
          Length = 504

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
 Frame = +2

Query: 230 LKSPLMGIFEKRRARNFFIYVQDYNDA-DPKTHQGLDLTRMTTRELI---AKHGLSDDTI 397
           +K   +   +K R     + +  +ND+ D ++H  L    +T + +I   A +  +  T+
Sbjct: 256 MKETRLDSVQKHRVDFLQLMMNAHNDSKDKESHTALSDMEITAQSIIFIFAGYEPTSSTL 315

Query: 398 DFIGHALALHRD---------DRYL---SEPALDTVKRMK 481
            F+ H+LA H D         DR L   + P  DTV  M+
Sbjct: 316 SFVLHSLATHPDTQKKLQEEIDRALPNKAPPTYDTVMEME 355

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>CP3A7_HUMAN (P24462) Cytochrome P450 3A7 (EC 1.14.14.1) (CYPIIIA7) (P450-HFLA)|
          Length = 503

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +2

Query: 257 EKRRARNFFIYVQDYNDADPKTHQGLDLTRMTTRELI---AKHGLSDDTIDFIGHALALH 427
           +K R     + +   N  D +TH+ L    +  + +I   A +  +   + FI + LA H
Sbjct: 265 QKHRVDFLQLMIDSQNSKDSETHKALSDLELMAQSIIFIFAGYETTSSVLSFIIYELATH 324

Query: 428 RDDRYLSEPALDTV 469
            D +   +  +DTV
Sbjct: 325 PDVQQKVQKEIDTV 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,435,795
Number of Sequences: 219361
Number of extensions: 1958180
Number of successful extensions: 4789
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4765
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

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