ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6e19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY236152.1| Triticum aestivum cytosolic malate dehydrogenase mRNA, partial cds Length = 683 Score = 482 bits (243), Expect = e-133 Identities = 290/305 (95%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 1 tgacccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaa 60 ||||||| || |||||||||||||||||||||||||| |||||| |||||| ||||||| Sbjct: 380 tgacccgcctagaccacaacagggcactcggtcagatttctgag-agacttggtgtccaa 438 Query: 61 gtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgat 120 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 439 gtttctgacgttaagaatgctattatctggggtaatcactcgtccagtcagtatcctgat 498 Query: 121 gttaaccatgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaa 180 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 499 gttaaccatgccactgtgaagactcccagtggagagaagcctgttcgtgaacttgttcaa 558 Query: 181 gangatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatc 240 || ||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 559 gatgatgaatggctaaatggggagttcattgccactgtccagcagcgtggtgctgcaatc 618 Query: 241 atcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 atcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatc 678 Query: 301 cgtga 305 ||||| Sbjct: 679 cgtga 683
>gb|BT016453.1| Zea mays clone Contig286 mRNA sequence Length = 1354 Score = 281 bits (142), Expect = 8e-73 Identities = 302/356 (84%), Gaps = 1/356 (0%) Strand = Plus / Plus Query: 1 tgacccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaa 60 |||||||||| |||||||||||||| || || ||||| |||||| ||||||||||||||| Sbjct: 553 tgacccgtctggaccacaacagggctcttggccagatttctgag-agacttaatgtccaa 611 Query: 61 gtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgat 120 ||| ||| |||||||||| ||| ||||||||||| ||||| ||| |||||| |||||| Sbjct: 612 gttagtgatgtgaagaatgttatcatctggggtaaccactcgtcctctcagtaccctgat 671 Query: 121 gttaaccatgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaa 180 |||||||||||||| ||||| ||| ||| ||| ||||||||||||||||| ||||| Sbjct: 672 gttaaccatgccacagtgaagacttccactggggagaagcctgttcgtgagcttgtctct 731 Query: 181 gangatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatc 240 || || || ||||| ||||| || ||||| | |||||||| |||| ||| ||||||||| Sbjct: 732 gatgacgagtggcttaatggtgaattcatcacaactgtccaacagcgtggtgctgcaatc 791 Query: 241 atcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatc 300 || |||||||| ||| |||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 792 attaaagcgagaaagttctccagtgctctctcggctgctagctctgcttgtgaccacatt 851 Query: 301 cgtgactgggttctgggaacccctgagggaacatttgnttncatggntgtntactc 356 ||||| |||||||| ||||| |||||||| ||||||| || ||||| ||| ||||| Sbjct: 852 cgtgattgggttcttggaacacctgagggtacatttgtttccatgggtgtgtactc 907
>gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1275 Score = 281 bits (142), Expect = 8e-73 Identities = 302/356 (84%), Gaps = 1/356 (0%) Strand = Plus / Plus Query: 1 tgacccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaa 60 |||||||||| |||||||||||||| || || ||||| |||||| ||||||||||||||| Sbjct: 544 tgacccgtctggaccacaacagggctcttggccagatttctgag-agacttaatgtccaa 602 Query: 61 gtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgat 120 ||| ||| |||||||||| ||| ||||||||||| ||||| ||| |||||| |||||| Sbjct: 603 gttagtgatgtgaagaatgttatcatctggggtaaccactcgtcctctcagtaccctgat 662 Query: 121 gttaaccatgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaa 180 |||||||||||||| ||||| ||| ||| ||| ||||||||||||||||| ||||| Sbjct: 663 gttaaccatgccacagtgaagacttccactggggagaagcctgttcgtgagcttgtctct 722 Query: 181 gangatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatc 240 || || || ||||| ||||| || ||||| | |||||||| |||| ||| ||||||||| Sbjct: 723 gatgacgagtggcttaatggtgaattcatcacaactgtccaacagcgtggtgctgcaatc 782 Query: 241 atcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatc 300 || |||||||| ||| |||||||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 783 attaaagcgagaaagttctccagtgctctctcggctgctagctctgcttgtgaccacatt 842 Query: 301 cgtgactgggttctgggaacccctgagggaacatttgnttncatggntgtntactc 356 ||||| |||||||| ||||| |||||||| ||||||| || ||||| ||| ||||| Sbjct: 843 cgtgattgggttcttggaacacctgagggtacatttgtttccatgggtgtgtactc 898
>ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplasmic malate dehydrogenase (OSJNBa0055P24.3), mRNA Length = 1381 Score = 248 bits (125), Expect = 1e-62 Identities = 296/354 (83%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 3 acccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagt 62 |||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 567 acccgtcttgaccacaacagggcacttggccagatctctgaaaa-acttaatgtccaagt 625 Query: 63 ttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgt 122 | |||| ||||||||||| || |||||||| || ||||| |||| ||||| |||||||| Sbjct: 626 tactgatgtgaagaatgcgatcatctggggcaaccactcatccacccagtaccctgatgt 685 Query: 123 taaccatgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaaga 182 |||||| ||||||||||| ||| ||||||||||||||||||| | ||||| ||| || Sbjct: 686 taaccacgccactgtgaagactcccagtggagagaagcctgtcagggaactcgttgctga 745 Query: 183 ngatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcat 242 ||||| ||| | ||| || ||||| | || |||||||||| ||| || || ||||| Sbjct: 746 tgatgagtggttaaatacggaattcatctctaccgtccagcagcgtggtgccgccatcat 805 Query: 243 caaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccg 302 ||| |||||||||| |||||||| || |||||||||||||| || || |||||||| || Sbjct: 806 caaggcgaggaagcaatccagtgccctatctgctgccagctctgcatgcgatcacattcg 865 Query: 303 tgactgggttctgggaacccctgagggaacatttgnttncatggntgtntactc 356 |||||||||||| || || |||||||||||||||| | ||||| ||| ||||| Sbjct: 866 tgactgggttcttggcactcctgagggaacatttgtctccatgggtgtgtactc 919
>dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G07, full insert sequence Length = 1326 Score = 248 bits (125), Expect = 1e-62 Identities = 296/354 (83%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 3 acccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagt 62 |||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 573 acccgtcttgaccacaacagggcacttggccagatctctgaaaa-acttaatgtccaagt 631 Query: 63 ttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgt 122 | |||| ||||||||||| || |||||||| || ||||| |||| ||||| |||||||| Sbjct: 632 tactgatgtgaagaatgcgatcatctggggcaaccactcatccacccagtaccctgatgt 691 Query: 123 taaccatgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaaga 182 |||||| ||||||||||| ||| ||||||||||||||||||| | ||||| ||| || Sbjct: 692 taaccacgccactgtgaagactcccagtggagagaagcctgtcagggaactcgttgctga 751 Query: 183 ngatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcat 242 ||||| ||| | ||| || ||||| | || |||||||||| ||| || || ||||| Sbjct: 752 tgatgagtggttaaatacggaattcatctctaccgtccagcagcgtggtgccgccatcat 811 Query: 243 caaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccg 302 ||| |||||||||| |||||||| || |||||||||||||| || || |||||||| || Sbjct: 812 caaggcgaggaagcaatccagtgccctatctgctgccagctctgcatgcgatcacattcg 871 Query: 303 tgactgggttctgggaacccctgagggaacatttgnttncatggntgtntactc 356 |||||||||||| || || |||||||||||||||| | ||||| ||| ||||| Sbjct: 872 tgactgggttcttggcactcctgagggaacatttgtctccatgggtgtgtactc 925
>dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064D20, full insert sequence Length = 1392 Score = 248 bits (125), Expect = 1e-62 Identities = 296/354 (83%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 3 acccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagt 62 |||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 578 acccgtcttgaccacaacagggcacttggccagatctctgaaaa-acttaatgtccaagt 636 Query: 63 ttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgt 122 | |||| ||||||||||| || |||||||| || ||||| |||| ||||| |||||||| Sbjct: 637 tactgatgtgaagaatgcgatcatctggggcaaccactcatccacccagtaccctgatgt 696 Query: 123 taaccatgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaaga 182 |||||| ||||||||||| ||| ||||||||||||||||||| | ||||| ||| || Sbjct: 697 taaccacgccactgtgaagactcccagtggagagaagcctgtcagggaactcgttgctga 756 Query: 183 ngatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcat 242 ||||| ||| | ||| || ||||| | || |||||||||| ||| || || ||||| Sbjct: 757 tgatgagtggttaaatacggaattcatctctaccgtccagcagcgtggtgccgccatcat 816 Query: 243 caaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccg 302 ||| |||||||||| |||||||| || |||||||||||||| || || |||||||| || Sbjct: 817 caaggcgaggaagcaatccagtgccctatctgctgccagctctgcatgcgatcacattcg 876 Query: 303 tgactgggttctgggaacccctgagggaacatttgnttncatggntgtntactc 356 |||||||||||| || || |||||||||||||||| | ||||| ||| ||||| Sbjct: 877 tgactgggttcttggcactcctgagggaacatttgtctccatgggtgtgtactc 930
>gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1371 Score = 248 bits (125), Expect = 1e-62 Identities = 296/354 (83%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 3 acccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagt 62 |||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 558 acccgtcttgaccacaacagggcacttggccagatctctgaaaa-acttaatgtccaagt 616 Query: 63 ttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgt 122 | |||| ||||||||||| || |||||||| || ||||| |||| ||||| |||||||| Sbjct: 617 tactgatgtgaagaatgcgatcatctggggcaaccactcatccacccagtaccctgatgt 676 Query: 123 taaccatgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaaga 182 |||||| ||||||||||| ||| ||||||||||||||||||| | ||||| ||| || Sbjct: 677 taaccacgccactgtgaagactcccagtggagagaagcctgtcagggaactcgttgctga 736 Query: 183 ngatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcat 242 ||||| ||| | ||| || ||||| | || |||||||||| ||| || || ||||| Sbjct: 737 tgatgagtggttaaatacggaattcatctctaccgtccagcagcgtggtgccgccatcat 796 Query: 243 caaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccg 302 ||| |||||||||| |||||||| || |||||||||||||| || || |||||||| || Sbjct: 797 caaggcgaggaagcaatccagtgccctatctgctgccagctctgcatgcgatcacattcg 856 Query: 303 tgactgggttctgggaacccctgagggaacatttgnttncatggntgtntactc 356 |||||||||||| || || |||||||||||||||| | ||||| ||| ||||| Sbjct: 857 tgactgggttcttggcactcctgagggaacatttgtctccatgggtgtgtactc 910
>gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds Length = 587 Score = 236 bits (119), Expect = 4e-59 Identities = 154/167 (92%) Strand = Plus / Plus Query: 184 gatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatc 243 ||||||||||| |||| | ||||||||||||||||||||||| ||| |||||||||||| Sbjct: 1 gatgaatggctaaatgcagggttcattgccactgtccagcagcgtggtgctgcaatcatc 60 Query: 244 aaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccgt 303 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 61 aaagcgaggaagctctccagtgctctctctgctgccagctctgcttgtgaccacatccgt 120 Query: 304 gactgggttctgggaacccctgagggaacatttgnttncatggntgt 350 || |||||||| |||||||||||||||||||||| || ||||| ||| Sbjct: 121 gattgggttctcggaacccctgagggaacatttgtttccatgggtgt 167
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 172 bits (87), Expect = 5e-40 Identities = 144/162 (88%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 3 acccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagt 62 |||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 17401655 acccgtcttgaccacaacagggcacttggccagatctctgaaaa-acttaatgtccaagt 17401713 Query: 63 ttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgt 122 | |||| ||||||||||| || |||||||| || ||||| |||| ||||| |||||||| Sbjct: 17401714 tactgatgtgaagaatgcgatcatctggggcaaccactcatccacccagtaccctgatgt 17401773 Query: 123 taaccatgccactgtgaatactgccagtggagagaagcctgt 164 |||||| ||||||||||| ||| ||||||||||||||||||| Sbjct: 17401774 taaccacgccactgtgaagactcccagtggagagaagcctgt 17401815 Score = 97.6 bits (49), Expect = 2e-17 Identities = 96/112 (85%) Strand = Plus / Plus Query: 217 gtccagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 276 |||||||||| ||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 17401963 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 17402022 Query: 277 gccagctcagcttgtgatcacatccgtgactgggttctgggaacccctgagg 328 |||||||| || || |||||||| |||||||||||||| || || ||||||| Sbjct: 17402023 gccagctctgcatgcgatcacattcgtgactgggttcttggcactcctgagg 17402074
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 172 bits (87), Expect = 5e-40 Identities = 144/162 (88%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 3 acccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagt 62 |||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 30650 acccgtcttgaccacaacagggcacttggccagatctctgaaaa-acttaatgtccaagt 30708 Query: 63 ttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgt 122 | |||| ||||||||||| || |||||||| || ||||| |||| ||||| |||||||| Sbjct: 30709 tactgatgtgaagaatgcgatcatctggggcaaccactcatccacccagtaccctgatgt 30768 Query: 123 taaccatgccactgtgaatactgccagtggagagaagcctgt 164 |||||| ||||||||||| ||| ||||||||||||||||||| Sbjct: 30769 taaccacgccactgtgaagactcccagtggagagaagcctgt 30810 Score = 97.6 bits (49), Expect = 2e-17 Identities = 96/112 (85%) Strand = Plus / Plus Query: 217 gtccagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 276 |||||||||| ||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 30958 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 31017 Query: 277 gccagctcagcttgtgatcacatccgtgactgggttctgggaacccctgagg 328 |||||||| || || |||||||| |||||||||||||| || || ||||||| Sbjct: 31018 gccagctctgcatgcgatcacattcgtgactgggttcttggcactcctgagg 31069
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 172 bits (87), Expect = 5e-40 Identities = 144/162 (88%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 3 acccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagt 62 |||||||||||||||||||||||||| || ||||||||||| | ||||||||||||||| Sbjct: 17410695 acccgtcttgaccacaacagggcacttggccagatctctgaaaa-acttaatgtccaagt 17410753 Query: 63 ttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgt 122 | |||| ||||||||||| || |||||||| || ||||| |||| ||||| |||||||| Sbjct: 17410754 tactgatgtgaagaatgcgatcatctggggcaaccactcatccacccagtaccctgatgt 17410813 Query: 123 taaccatgccactgtgaatactgccagtggagagaagcctgt 164 |||||| ||||||||||| ||| ||||||||||||||||||| Sbjct: 17410814 taaccacgccactgtgaagactcccagtggagagaagcctgt 17410855 Score = 97.6 bits (49), Expect = 2e-17 Identities = 96/112 (85%) Strand = Plus / Plus Query: 217 gtccagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 276 |||||||||| ||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 17411003 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 17411062 Query: 277 gccagctcagcttgtgatcacatccgtgactgggttctgggaacccctgagg 328 |||||||| || || |||||||| |||||||||||||| || || ||||||| Sbjct: 17411063 gccagctctgcatgcgatcacattcgtgactgggttcttggcactcctgagg 17411114
>gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, partial cds Length = 529 Score = 143 bits (72), Expect = 4e-31 Identities = 124/143 (86%) Strand = Plus / Plus Query: 214 actgtccagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgctctctct 273 |||||||| |||| ||| ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 13 actgtccaacagcgtggtgctgcaatcattaaagcgagaaagttctccagtgctctctcg 72 Query: 274 gctgccagctcagcttgtgatcacatccgtgactgggttctgggaacccctgagggaaca 333 ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| ||| Sbjct: 73 gctgctagctctgcttgtgaccacattcgtgattgggttcttggaacacctgagggtaca 132 Query: 334 tttgnttncatggntgtntactc 356 |||| || ||||| ||| ||||| Sbjct: 133 tttgtttccatgggtgtgtactc 155
>gb|AY109362.1| Zea mays CL1892_2 mRNA sequence Length = 943 Score = 143 bits (72), Expect = 4e-31 Identities = 124/143 (86%) Strand = Plus / Plus Query: 214 actgtccagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgctctctct 273 |||||||| |||| ||| ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 594 actgtccaacagcgtggtgctgcaatcattaaagcgagaaagttctccagtgctctctcg 653 Query: 274 gctgccagctcagcttgtgatcacatccgtgactgggttctgggaacccctgagggaaca 333 ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| |||||||| ||| Sbjct: 654 gctgctagctctgcttgtgaccacattcgtgattgggttcttggaacacctgagggtaca 713 Query: 334 tttgnttncatggntgtntactc 356 |||| || ||||| ||| ||||| Sbjct: 714 tttgtttccatgggtgtgtactc 736 Score = 79.8 bits (40), Expect = 6e-12 Identities = 80/92 (86%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 1 tgacccgtcttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaa 60 |||||||||| || ||||||||||| || || ||||| |||||| ||||||||||||||| Sbjct: 482 tgacccgtctcgagcacaacagggctcttggccagatttctgag-agacttaatgtccaa 540 Query: 61 gtttctgacgtgaagaatgctattatctgggg 92 ||| ||| |||||||||| ||| |||||||| Sbjct: 541 gttagtgatgtgaagaatgttatcatctgggg 572
>emb|X96539.1|MCMDH M.crystallinum mRNA for malate dehydrogenase Length = 1273 Score = 135 bits (68), Expect = 1e-28 Identities = 262/326 (80%), Gaps = 1/326 (0%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagtttctga 68 |||||||||||||| || || ||||||||||| ||| ||| | ||||| ||||| ||||| Sbjct: 561 cttgaccacaacagagctctaggtcagatctcagag-agattgaatgttcaagtctctga 619 Query: 69 cgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaacca 128 || ||||||| ||||| ||||| || ||||| || | ||| || |||||||| ||||| Sbjct: 620 tgttaagaatgtgattatttggggaaaccactcctcaactcaataccctgatgtcaacca 679 Query: 129 tgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaagangatga 188 || || ||||| || ||| || |||||||||||||| |||||| || |||| Sbjct: 680 cgctaccgtgaaaacacagggtgttgataagcctgttcgtgagcttgttgctgatgatgc 739 Query: 189 atggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagc 248 |||| ||||||| |||||||| | ||||| || |||| ||| ||||| |||||||| || Sbjct: 740 atggttgaatggagagttcataacaactgtgcaacagcgtggagctgccatcatcaaggc 799 Query: 249 gaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccgtgactg 308 ||||||||||||||||| | || ||||| || || |||||||||||||||| ||| || Sbjct: 800 aaggaagctctccagtgcattgtcagctgctagttctgcttgtgatcacatccatgattg 859 Query: 309 ggttctgggaacccctgagggaacat 334 ||| || |||||||| |||||||||| Sbjct: 860 ggtgcttggaaccccagagggaacat 885
>emb|AJ843126.1| Plantago major mRNA for malate dehydrogenase (mdh1 gene) Length = 1353 Score = 119 bits (60), Expect = 6e-24 Identities = 181/222 (81%) Strand = Plus / Plus Query: 108 tcagtatcctgatgttaaccatgccactgtgaatactgccagtggagagaagcctgttcg 167 ||||||||||||||| |||||||| || || || ||| || |||||| || |||||||| Sbjct: 636 tcagtatcctgatgtgaaccatgctaccgtaaaaactcccgctggagataaacctgttcg 695 Query: 168 tgaacttgttcaagangatgaatggctgaatggcgagttcattgccactgtccagcagcn 227 ||| |||||| || || ||||| ||||| |||||||||| | ||||||||||||| Sbjct: 696 tgagcttgttgctgatgaccaatggttgaataccgagttcatttcaactgtccagcagcg 755 Query: 228 tggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagc 287 ||| ||||| || ||||| || |||||| | || |||||||| |||||||| ||||| || Sbjct: 756 tggtgctgccattatcaaggctaggaagttttctagtgctctttctgctgctagctctgc 815 Query: 288 ttgtgatcacatccgtgactgggttctgggaacccctgaggg 329 |||||| ||||| ||||| ||||| ||||||| || ||||| Sbjct: 816 ttgtgaccacattcgtgattgggtcttgggaactccagaggg 857
>emb|AJ251083.1|BVU251083 Beta vulgaris mRNA for putative malate dehydrogenase (nr1 gene) Length = 999 Score = 109 bits (55), Expect = 6e-21 Identities = 260/325 (80%), Gaps = 3/325 (0%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagtttctga 68 ||||| ||||||||||| |||||||| ||||| ||| ||||| |||| ||||| ||||| Sbjct: 475 cttgatcacaacagggctctcggtcaaatctcagag-agactgaatgctcaagtatctga 533 Query: 69 cgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaacc- 127 || ||||||| || |||||||| || ||||| || ||||| |||||||| |||| Sbjct: 534 tgttaagaatgtcatcatctggggaaaccactcctcatcccagtaccctgatgtgaaccc 593 Query: 128 atgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgttcaagangatg 187 |||| || ||||| || | ||||| |||||| |||| || || ||||| || |||| Sbjct: 594 atgc-accgtgaaaacagggagtggtgagaaggctgtccgagagcttgtcgctgatgatg 652 Query: 188 aatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaag 247 |||| | ||||| |||||||| | ||||| || || | ||| ||||| |||||||||| Sbjct: 653 catggttaaatggagagttcataacaactgtgcaacaacgtggtgctgccatcatcaaag 712 Query: 248 cgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccgtgact 307 | |||||||| ||||||||| | || ||||| || || |||||||||||||||||||| | Sbjct: 713 caaggaagctttccagtgctttgtcagctgctagttctgcttgtgatcacatccgtgatt 772 Query: 308 gggttctgggaacccctgagggaac 332 |||| || |||||||| |||||||| Sbjct: 773 gggtgcttggaaccccagagggaac 797
>gb|AF367442.1| Prunus persica clone Mdh1 NAD-dependent malate dehydrogenase (mdh1) mRNA, complete cds Length = 1491 Score = 107 bits (54), Expect = 2e-20 Identities = 217/272 (79%) Strand = Plus / Plus Query: 58 caagtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcct 117 ||||||||||| || || |||| |||||||||||| || ||||| || ||||||||| Sbjct: 523 caagtttctgatgttaaaaatgttattatctggggaaaccactcatcatcacagtatcct 582 Query: 118 gatgttaaccatgccactgtgaatactgccagtggagagaagcctgttcgtgaacttgtt 177 ||||| |||||||| ||||| || || | ||||||||| |||||||||| |||||| Sbjct: 583 gatgtcaaccatgcaactgtcaagacaccttctggagagaaagctgttcgtgagcttgtt 642 Query: 178 caagangatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgca 237 || |||| |||| ||| || || |||||| ||||||| || || | ||| |||||| Sbjct: 643 gctgatgatgcatggttgaccggagaattcattaccactgttcaacaacgtggtgctgca 702 Query: 238 atcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcac 297 |||||||| || | ||||| ||||| || | |||||||| ||||| |||||||||||| Sbjct: 703 atcatcaaggctcgtaagctgtccagggcattatctgctgctagctctgcttgtgatcac 762 Query: 298 atccgtgactgggttctgggaacccctgaggg 329 || ||||| ||||| || |||||||| ||||| Sbjct: 763 attcgtgattgggtacttggaacccccgaggg 794
>ref|NM_100321.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT1G04410 mRNA, complete cds Length = 1484 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 842 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 901 Query: 292 gatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||||||||||||||| || ||||| || ||||| Sbjct: 902 gaccacatccgtgactgggtccttggaactccagaggg 939 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgag 44 ||||||||||||||||| | || |||||||||||| Sbjct: 620 cttgaccacaacagggctttgggacagatctctgag 655
>gb|DQ225182.1| Lycopersicon chilense malate dehydrogenase mRNA, complete cds Length = 1005 Score = 99.6 bits (50), Expect = 6e-18 Identities = 161/200 (80%) Strand = Plus / Plus Query: 157 aagcctgttcgtgaacttgttcaagangatgaatggctgaatggcgagttcattgccact 216 ||||| || |||||||||||| || |||| |||| |||| || ||||||||| | ||| Sbjct: 628 aagccagtccgtgaacttgttgctgatgatgcatggttgaacggtgagttcatttctact 687 Query: 217 gtccagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 276 || |||||| || ||||| || |||||||| || ||||| || ||||| ||||| ||| Sbjct: 688 gtacagcagaggggtgctgccattatcaaagctagaaagctttctagtgccctctccgct 747 Query: 277 gccagctcagcttgtgatcacatccgtgactgggttctgggaacccctgagggaacattt 336 || || || |||||||||||||| ||||||||||| || ||||| || |||||||| ||| Sbjct: 748 gctagttctgcttgtgatcacattcgtgactgggtccttggaactccagagggaactttt 807 Query: 337 gnttncatggntgtntactc 356 | || |||| ||| ||||| Sbjct: 808 gtttctatgggtgtttactc 827
>gb|AY133655.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 999 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 697 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 756 Query: 292 gatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||||||||||||||| || ||||| || ||||| Sbjct: 757 gaccacatccgtgactgggtccttggaactccagaggg 794 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgag 44 ||||||||||||||||| | || |||||||||||| Sbjct: 475 cttgaccacaacagggctttgggacagatctctgag 510
>gb|AY081563.1| Arabidopsis thaliana unknown protein (At1g04410) mRNA, complete cds Length = 1223 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 697 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 756 Query: 292 gatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||||||||||||||| || ||||| || ||||| Sbjct: 757 gaccacatccgtgactgggtccttggaactccagaggg 794 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgag 44 ||||||||||||||||| | || |||||||||||| Sbjct: 475 cttgaccacaacagggctttgggacagatctctgag 510
>gb|AY065134.1| Arabidopsis thaliana unknown protein (At1g04410; F19P19.13) mRNA, complete cds Length = 1314 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 783 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 842 Query: 292 gatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||||||||||||||| || ||||| || ||||| Sbjct: 843 gaccacatccgtgactgggtccttggaactccagaggg 880 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgag 44 ||||||||||||||||| | || |||||||||||| Sbjct: 561 cttgaccacaacagggctttgggacagatctctgag 596
>gb|AY050374.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 1309 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 779 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 838 Query: 292 gatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||||||||||||||| || ||||| || ||||| Sbjct: 839 gaccacatccgtgactgggtccttggaactccagaggg 876 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgag 44 ||||||||||||||||| | || |||||||||||| Sbjct: 557 cttgaccacaacagggctttgggacagatctctgag 592
>emb|BX815185.1|CNS0ACZH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 541 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 7 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 66 Query: 292 gatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||||||||||||||| || ||||| || ||||| Sbjct: 67 gaccacatccgtgactgggtccttggaactccagaggg 104
>emb|BX815710.1|CNS0ACSG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 600 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 72 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 131 Query: 292 gatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||||||||||||||| || ||||| || ||||| Sbjct: 132 gaccacatccgtgactgggtccttggaactccagaggg 169
>gb|AY088023.1| Arabidopsis thaliana clone 40467 mRNA, complete sequence Length = 1351 Score = 99.6 bits (50), Expect = 6e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 819 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 878 Query: 292 gatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||||||||||||||| || ||||| || ||||| Sbjct: 879 gaccacatccgtgactgggtccttggaactccagaggg 916 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgag 44 ||||||||||||||||| | || |||||||||||| Sbjct: 597 cttgaccacaacagggctttgggacagatctctgag 632
>gb|AY057442.1| Arabidopsis thaliana ecotype Ler cryptochrome 2 (CRY2) gene, complete cds Length = 4649 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 265 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 324 Query: 292 gatcacatccgtgactgggttctgggaac 320 || ||||||||||||||||| || ||||| Sbjct: 325 gaccacatccgtgactgggtccttggaac 353
>gb|AY057441.1| Arabidopsis thaliana ecotype Cvi cryptochrome 2 (CRY2) gene, complete cds Length = 4659 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 272 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 331 Query: 292 gatcacatccgtgactgggttctgggaac 320 || ||||||||||||||||| || ||||| Sbjct: 332 gaccacatccgtgactgggtccttggaac 360
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| |||||| Sbjct: 43304 gctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctctgcttgt 43363 Query: 292 gatcacatccgtgactgggttctgggaac 320 || ||||||||||||||||| || ||||| Sbjct: 43364 gaccacatccgtgactgggtccttggaac 43392 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgag 44 ||||||||||||||||| | || |||||||||||| Sbjct: 42993 cttgaccacaacagggctttgggacagatctctgag 43028
>gb|AF020272.1|AF020272 Medicago sativa cytosolic malate dehydrogenase (cmdh) mRNA, complete cds Length = 1397 Score = 95.6 bits (48), Expect = 9e-17 Identities = 216/270 (80%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 52 aatgtccaagtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcag 111 ||||| ||||||||||| || ||||||| || |||||||||||||| || || | ||| Sbjct: 578 aatgttcaagtttctgatgtaaagaatgtcataatctggggtaatcattcatcaacccag 637 Query: 112 tatcctgatgttaaccatgccactgtgaatactgccag-tggagagaagcctgttcgtga 170 ||||||||||| |||||||| ||||| || || |||| ||| |||||||| || ||| | Sbjct: 638 tatcctgatgtcaaccatgcaactgttaacac-cccagctggggagaagcccgtccgtca 696 Query: 171 acttgttcaagangatgaatggctgaatggcgagttcattgccactgtccagcagcntgg 230 ||||||| || |||| |||| ||||||| || |||||| ||||||| || || | ||| Sbjct: 697 acttgtttccgacgatgcatggttgaatggagaattcatttccactgttcaacaacgtgg 756 Query: 231 cgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttg 290 |||||||| || || || || ||||| || ||||| || |||||||| || | ||||| Sbjct: 757 tgctgcaattattaaggctagaaagctttcaagtgcactatctgctgctagtgctgcttg 816 Query: 291 tgatcacatccgtgactgggttctgggaac 320 ||| ||||| || || |||||||| ||||| Sbjct: 817 tgaccacattcgcgattgggttcttggaac 846
>emb|AJ299059.1|CAR299059 Cicer arietinum mRNA for cytosolic malate dehydrogenase (ORF1), clone CanCMDH Length = 1399 Score = 85.7 bits (43), Expect = 9e-14 Identities = 217/273 (79%), Gaps = 2/273 (0%) Strand = Plus / Plus Query: 58 caagtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcct 117 ||||||||||| | ||||||| || |||||||||||||| || || | ||||||||| Sbjct: 589 caagtttctgaaataaagaatgtcataatctggggtaatcattcatcaactcagtatccc 648 Query: 118 gatgttaaccatgccactgtgaatactgccag-tggagagaagcctgttcgtgaacttgt 176 ||||| | |||||| ||||| || ||| |||| ||| ||||||||||| ||||||||||| Sbjct: 649 gatgtcacccatgcaactgttaaaact-ccagctggggagaagcctgtccgtgaacttgt 707 Query: 177 tcaagangatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgc 236 | || |||| ||| ||||||| || ||||| | ||||| || || | ||| ||||| Sbjct: 708 ttctgatgatgcctggttgaatggggaattcataccaactgttcaacaacgtggtgctgc 767 Query: 237 aatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatca 296 ||| ||||| || || ||| | || ||||| || |||||||| || | |||||||| || Sbjct: 768 aattatcaaggctagaaagttgtcaagtgcactatctgctgctagtgctgcttgtgacca 827 Query: 297 catccgtgactgggttctgggaacccctgaggg 329 ||| || || |||||||| ||||| |||||||| Sbjct: 828 cattcgcgattgggttcttggaactcctgaggg 860
>gb|AF459645.1| Lupinus albus malate dehydrogenase (MDH1) mRNA, complete cds Length = 1290 Score = 79.8 bits (40), Expect = 6e-12 Identities = 247/313 (78%), Gaps = 3/313 (0%) Strand = Plus / Plus Query: 18 aacagggcactcggtcagatctctgagnagacttaatgtccaagtttctgacgtgaagaa 77 ||||||||||| ||||| || ||||| ||||| || || ||||||||||| || || || Sbjct: 536 aacagggcactgggtcaaatttctga-aagactgaacgttcaagtttctgatgtaaaaaa 594 Query: 78 tgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgccactgt 137 || ||| || |||||||| || || || ||||||||||||||| |||||||| ||||| Sbjct: 595 tgttataatatggggtaaccattcatcatctcagtatcctgatgtcaaccatgcaactgt 654 Query: 138 gaatactgccagt-ggagagaagcctgttcgtgaacttgttcaagangatgaatggctga 196 | || |||| || || ||||||||||||||||||||| || |||| |||| ||| Sbjct: 655 tacaacc-ccagcaggggaaaagcctgttcgtgaacttgttgctgatgatgcatggttga 713 Query: 197 atggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagcgaggaagc 256 || || ||||| || |||||||| || | ||| |||||||| || ||||| || |||| Sbjct: 714 attcggaattcatagctactgtccaacaacgtggtgctgcaattattaaagctagaaagc 773 Query: 257 tctccagtgctctctctgctgccagctcagcttgtgatcacatccgtgactgggttctgg 316 | || ||||| || |||||||| || | |||||||| ||||| | || |||||||| | Sbjct: 774 tttcaagtgcactatctgctgctagtgctgcttgtgaccacattagagattgggttcttg 833 Query: 317 gaacccctgaggg 329 |||| |||||||| Sbjct: 834 gaactcctgaggg 846
>ref|NM_123699.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT5G43330 mRNA, complete cds Length = 1308 Score = 75.8 bits (38), Expect = 9e-11 Identities = 89/106 (83%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 ||||| || ||||| || |||||||| || ||||| || ||||| || |||||||||||| Sbjct: 816 gctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctcagcttgt 875 Query: 292 gatcacatccgtgactgggttctgggaacccctgagggaacatttg 337 || || |||||||| |||||| | ||||| |||||||| ||||||| Sbjct: 876 gaccatatccgtgattgggttgttggaacacctgagggcacatttg 921
>gb|AY091220.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase (At5g43330) mRNA, complete cds Length = 1030 Score = 75.8 bits (38), Expect = 9e-11 Identities = 89/106 (83%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 ||||| || ||||| || |||||||| || ||||| || ||||| || |||||||||||| Sbjct: 697 gctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctcagcttgt 756 Query: 292 gatcacatccgtgactgggttctgggaacccctgagggaacatttg 337 || || |||||||| |||||| | ||||| |||||||| ||||||| Sbjct: 757 gaccatatccgtgattgggttgttggaacacctgagggcacatttg 802
>gb|AY072137.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase (At5g43330) mRNA, complete cds Length = 1198 Score = 75.8 bits (38), Expect = 9e-11 Identities = 89/106 (83%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 ||||| || ||||| || |||||||| || ||||| || ||||| || |||||||||||| Sbjct: 770 gctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctcagcttgt 829 Query: 292 gatcacatccgtgactgggttctgggaacccctgagggaacatttg 337 || || |||||||| |||||| | ||||| |||||||| ||||||| Sbjct: 830 gaccatatccgtgattgggttgttggaacacctgagggcacatttg 875
>ref|NM_001006693.1| Xenopus tropicalis malate dehydrogenase 1, NAD (soluble) (mdh1), mRNA Length = 1305 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| |||||||||||||||||||| |||| |||||||||||||| | |||||| Sbjct: 609 aagaatgtaattatctggggtaatcactcatccactcagtatcctgatgcttcccatgca 668 Query: 133 actgtgaat 141 ||||||||| Sbjct: 669 actgtgaat 677
>emb|AJ299256.1|NTA299256 Nicotiana tabacum mRNA for malate dehydrogenase (md1 gene) Length = 1328 Score = 73.8 bits (37), Expect = 3e-10 Identities = 146/183 (79%) Strand = Plus / Plus Query: 150 tggagagaagcctgttcgtgaacttgttcaagangatgaatggctgaatggcgagttcat 209 |||||||||||| || ||||||||||| || |||| |||| ||||||| |||||||| Sbjct: 670 tggagagaagccagtccgtgaacttgtggctgatgatgcatggttgaatggtgagttcat 729 Query: 210 tgccactgtccagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgctct 269 | | ||||| |||||| || ||||| || ||||| || || ||||| || || || || Sbjct: 730 ttctactgtacagcagaggggtgctgccattatcaaggctagaaagctttctagcgccct 789 Query: 270 ctctgctgccagctcagcttgtgatcacatccgtgactgggttctgggaacccctgaggg 329 || ||||| || || |||||||||||||| ||||| ||||| || ||||| || ||||| Sbjct: 790 ttccgctgctagttctgcttgtgatcacatacgtgattgggtccttggaactccagaggg 849 Query: 330 aac 332 ||| Sbjct: 850 aac 852
>gb|BC075396.1| Xenopus tropicalis malate dehydrogenase 1, NAD (soluble), mRNA (cDNA clone MGC:89131 IMAGE:7007067), complete cds Length = 1305 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| |||||||||||||||||||| |||| |||||||||||||| | |||||| Sbjct: 609 aagaatgtaattatctggggtaatcactcatccactcagtatcctgatgcttcccatgca 668 Query: 133 actgtgaat 141 ||||||||| Sbjct: 669 actgtgaat 677
>emb|CR761081.2| Xenopus tropicalis finished cDNA, clone TEgg049g04 Length = 1293 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| |||||||||||||||||||| |||| |||||||||||||| | |||||| Sbjct: 607 aagaatgtaattatctggggtaatcactcatccactcagtatcctgatgcttcccatgca 666 Query: 133 actgtgaat 141 ||||||||| Sbjct: 667 actgtgaat 675
>emb|BX841818.1|CNS09Y6C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1075 Score = 71.9 bits (36), Expect = 1e-09 Identities = 70/80 (87%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagctt-g 290 |||||||||||||| |||||| || | || ||||| ||||||||||| ||||| |||| | Sbjct: 768 gctgcaatcatcaaggcgagggagttgtctagtgcgctctctgctgctagctctgcttgg 827 Query: 291 tgatcacatccgtgactggg 310 ||| |||||||||||||||| Sbjct: 828 tgaccacatccgtgactggg 847 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 9 cttgaccacaacagggcactcggtcagatctctgag 44 ||||||||||||||||| | || |||||||||||| Sbjct: 546 cttgaccacaacagggctttgggacagatctctgag 581
>gb|AF459646.1| Lupinus albus malate dehydrogenase (MDH2) mRNA, complete cds Length = 1277 Score = 71.9 bits (36), Expect = 1e-09 Identities = 204/258 (79%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 76 aatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgccact 135 |||| ||| ||||||||||| || || || | ||||||||| ||||| |||||||| ||| Sbjct: 592 aatgttataatctggggtaaccattcatcaactcagtatcccgatgtcaaccatgcaact 651 Query: 136 gtgaatactgccag-tggagagaagcctgttcgtgaacttgttcaagangatgaatggct 194 || | ||| |||| ||| || |||||||| |||||||||||| || |||| ||| | Sbjct: 652 gttacaact-ccagctggggaaaagcctgtccgtgaacttgtttgtgatgatgcctggtt 710 Query: 195 gaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagcgaggaa 254 |||| || ||||| ||||||||| || | ||| |||||||| |||||||| || || Sbjct: 711 gaattcagaattcataagcactgtccaacaacgtggtgctgcaattatcaaagctagaaa 770 Query: 255 gctctccagtgctctctctgctgccagctcagcttgtgatcacatccgtgactgggttct 314 ||| || ||||| || |||||||| || | |||||||| ||||| | || |||||||| Sbjct: 771 gctttcaagtgcactatctgctgctagtgctgcttgtgaccacattagagattgggttct 830 Query: 315 gggaacccctgagggaac 332 ||||| ||||||||||| Sbjct: 831 tggaactcctgagggaac 848
>gb|AC122161.26| Medicago truncatula clone mth2-11l3, complete sequence Length = 118625 Score = 69.9 bits (35), Expect = 5e-09 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 52 aatgtccaagtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcag 111 ||||| ||||||||||| || ||||||| || |||||||||||||| || || | ||| Sbjct: 79661 aatgttcaagtttctgatgtaaagaatgtcataatctggggtaatcattcatcaacccag 79720 Query: 112 tatcctgatgttaaccatgccactgtgaatactgccag-tggagagaagcctgttcgtga 170 ||||||||||| |||||||| ||||| || || |||| ||| ||||||||||| || || Sbjct: 79721 tatcctgatgtcaaccatgcaactgttaacac-cccagctggggagaagcctgtccgcga 79779 Query: 171 acttgtt 177 ||||||| Sbjct: 79780 acttgtt 79786
>gb|AC149493.7| Medicago truncatula clone mth2-116k17, complete sequence Length = 105229 Score = 69.9 bits (35), Expect = 5e-09 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 52 aatgtccaagtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcag 111 ||||| ||||||||||| || ||||||| || |||||||||||||| || || | ||| Sbjct: 35878 aatgttcaagtttctgatgtaaagaatgtcataatctggggtaatcattcatcaacccag 35937 Query: 112 tatcctgatgttaaccatgccactgtgaatactgccag-tggagagaagcctgttcgtga 170 ||||||||||| |||||||| ||||| || || |||| ||| ||||||||||| || || Sbjct: 35938 tatcctgatgtcaaccatgcaactgttaacac-cccagctggggagaagcctgtccgcga 35996 Query: 171 acttgtt 177 ||||||| Sbjct: 35997 acttgtt 36003
>gb|AC122171.21| Medicago truncatula clone mth2-23b18, complete sequence Length = 125865 Score = 69.9 bits (35), Expect = 5e-09 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 52 aatgtccaagtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcag 111 ||||| ||||||||||| || ||||||| || |||||||||||||| || || | ||| Sbjct: 38965 aatgttcaagtttctgatgtaaagaatgtcataatctggggtaatcattcatcaacccag 38906 Query: 112 tatcctgatgttaaccatgccactgtgaatactgccag-tggagagaagcctgttcgtga 170 ||||||||||| |||||||| ||||| || || |||| ||| ||||||||||| || || Sbjct: 38905 tatcctgatgtcaaccatgcaactgttaacac-cccagctggggagaagcctgtccgcga 38847 Query: 171 acttgtt 177 ||||||| Sbjct: 38846 acttgtt 38840
>gb|AY087986.1| Arabidopsis thaliana clone 40174 mRNA, complete sequence Length = 1239 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 ||||| || ||||| || |||||||| || ||||| || ||||| || |||||||||||| Sbjct: 770 gctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctcagcttgt 829 Query: 292 gatcacatccgtgactgggttctgggaacccctgagggaacatttg 337 || || |||||||| |||||| | ||||| || ||||| ||||||| Sbjct: 830 gaccatatccgtgattgggttgttggaacacccgagggcacatttg 875
>gb|DQ294258.1| Solanum tuberosum clone 093D06 malate dehydrogenase-like protein mRNA, complete cds Length = 1220 Score = 67.9 bits (34), Expect = 2e-08 Identities = 137/173 (79%) Strand = Plus / Plus Query: 184 gatgaatggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatc 243 |||| |||| |||| || ||||||||| | ||||| |||||| || ||||| || ||| Sbjct: 685 gatgcatggttgaacggtgagttcatttctactgtacagcagaggggtgctgccattatc 744 Query: 244 aaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccgt 303 || || || ||||| || ||||| || || ||||| || || |||||||||||||| ||| Sbjct: 745 aaggctagaaagctttctagtgccctttccgctgctagttctgcttgtgatcacattcgt 804 Query: 304 gactgggttctgggaacccctgagggaacatttgnttncatggntgtntactc 356 |||||||| || ||||| || ||||| || |||| || |||| ||| ||||| Sbjct: 805 gactgggtccttggaactccagagggcacttttgtttctatgggtgtttactc 857
>gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, complete cds Length = 1312 Score = 65.9 bits (33), Expect = 8e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 61 gtttctgacgtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgat 120 |||||||| || ||||||| ||||||||||| |||||||| || | |||||||||||| Sbjct: 578 gtttctgatgtaaagaatgtcattatctggggcaatcactcatcaacccagtatcctgat 637 Query: 121 gttaaccatgccactgt 137 ||||| ||||| ||||| Sbjct: 638 gttaatcatgcaactgt 654 Score = 50.1 bits (25), Expect = 0.005 Identities = 108/136 (79%) Strand = Plus / Plus Query: 194 tgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagcgagga 253 ||||||| || |||||| | ||||| || || | |||||||||||| |||||||| || | Sbjct: 711 tgaatggggaattcattactactgttcaacaacgtggcgctgcaattatcaaagctagaa 770 Query: 254 agctctccagtgctctctctgctgccagctcagcttgtgatcacatccgtgactgggttc 313 |||| || ||||| || || ||||| || | |||||||| || || | |||||||||| Sbjct: 771 agctttcaagtgcactatcagctgctagtgctgcttgtgaccatattagagactgggttc 830 Query: 314 tgggaacccctgaggg 329 | ||||| ||| |||| Sbjct: 831 ttggaactcctcaggg 846
>emb|AM040268.1| Capsicum chinense partial mRNA for cytosolic malate dehydrogenase (mdh gene) Length = 773 Score = 65.9 bits (33), Expect = 8e-08 Identities = 162/207 (78%) Strand = Plus / Plus Query: 150 tggagagaagcctgttcgtgaacttgttcaagangatgaatggctgaatggcgagttcat 209 |||||| ||||| || ||||||||||| || |||| |||| |||| || |||||||| Sbjct: 168 tggagaaaagccagtccgtgaacttgtggctgatgatgcatggttgaacggtgagttcat 227 Query: 210 tgccactgtccagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgctct 269 | | ||||| |||||| || ||||| || ||||| || || ||||| || || ||||| Sbjct: 228 tactactgtacagcagaggggtgctgccattatcaaggctagaaagctttctagcgctct 287 Query: 270 ctctgctgccagctcagcttgtgatcacatccgtgactgggttctgggaacccctgaggg 329 |||||||| || || |||||||||||||| || || ||||| || ||||| || ||||| Sbjct: 288 ttctgctgctagttctgcttgtgatcacattcgcgattgggtccttggaactccagaggg 347 Query: 330 aacatttgnttncatggntgtntactc 356 || |||| || |||| ||| ||||| Sbjct: 348 tacttttgtttctatgggtgtttactc 374
>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20 Length = 91193 Score = 65.9 bits (33), Expect = 8e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 ||||| || ||||| || |||||||| || ||||| || ||||| || |||||||||||| Sbjct: 6968 gctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctcagcttgt 7027 Query: 292 gatcacatccgtgactgggttctgggaacccctgagg 328 || || |||||||| |||||| | ||||| ||||||| Sbjct: 7028 gaccatatccgtgattgggttgttggaacacctgagg 7064
>gb|DQ215423.1| Taeniopygia guttata clone 0062P0002E12 malate dehydrogenase cytoplasmic variant 2-like mRNA, complete sequence Length = 1283 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 70 gtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccat 129 |||||||||| || |||||||| || ||||| |||| ||| |||||||||||||||||| Sbjct: 590 gtgaagaatgtcatcatctggggcaaccactcctccactcaatatcctgatgttaaccat 649 Query: 130 gc 131 || Sbjct: 650 gc 651
>gb|DQ215422.1| Taeniopygia guttata clone 0058P0005E10 malate dehydrogenase cytoplasmic variant 2-like mRNA, complete sequence Length = 1268 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 70 gtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccat 129 |||||||||| || |||||||| || ||||| |||| ||| |||||||||||||||||| Sbjct: 588 gtgaagaatgtcatcatctggggcaaccactcctccactcaatatcctgatgttaaccat 647 Query: 130 gc 131 || Sbjct: 648 gc 649
>gb|DQ215421.1| Taeniopygia guttata clone 0061P0023E03 malate dehydrogenase cytoplasmic variant 1-like mRNA, complete sequence Length = 1552 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 70 gtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccat 129 |||||||||| || |||||||| || ||||| |||| ||| |||||||||||||||||| Sbjct: 584 gtgaagaatgtcatcatctggggcaaccactcctccactcaatatcctgatgttaaccat 643 Query: 130 gc 131 || Sbjct: 644 gc 645
>gb|AY161295.1| Danio rerio cytosolic malate dehydrogenase B (mdhB) mRNA, complete cds Length = 1048 Score = 60.0 bits (30), Expect = 5e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 190 tggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagcg 249 |||||||| || || |||||| | || || ||||||| ||| |||||| |||||||||| Sbjct: 674 tggctgaagggagaattcatttctacggtgcagcagcgtggtgctgcagtcatcaaagcc 733 Query: 250 aggaagctctccagtgc 266 ||||| ||||||||||| Sbjct: 734 aggaaactctccagtgc 750
>ref|NM_199969.1| Danio rerio malate dehydrogenase 1b, NAD (soluble) (mdh1b), mRNA Length = 1751 Score = 60.0 bits (30), Expect = 5e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 190 tggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagcg 249 |||||||| || || |||||| | || || ||||||| ||| |||||| |||||||||| Sbjct: 786 tggctgaagggagaattcatttctacggtgcagcagcgtggtgctgcagtcatcaaagcc 845 Query: 250 aggaagctctccagtgc 266 ||||| ||||||||||| Sbjct: 846 aggaaactctccagtgc 862
>gb|BC071512.1| Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA clone MGC:86883 IMAGE:6904389), complete cds Length = 1604 Score = 60.0 bits (30), Expect = 5e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 190 tggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagcg 249 |||||||| || || |||||| | || || ||||||| ||| |||||| |||||||||| Sbjct: 687 tggctgaagggagaattcatttctacggtgcagcagcgtggtgctgcagtcatcaaagcc 746 Query: 250 aggaagctctccagtgc 266 ||||| ||||||||||| Sbjct: 747 aggaaactctccagtgc 763
>gb|BC050508.1| Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA clone MGC:56234 IMAGE:5601379), complete cds Length = 1751 Score = 60.0 bits (30), Expect = 5e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 190 tggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagcg 249 |||||||| || || |||||| | || || ||||||| ||| |||||| |||||||||| Sbjct: 786 tggctgaagggagaattcatttctacggtgcagcagcgtggtgctgcagtcatcaaagcc 845 Query: 250 aggaagctctccagtgc 266 ||||| ||||||||||| Sbjct: 846 aggaaactctccagtgc 862
>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence Length = 87839 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 232 gctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgt 291 ||||||||||| ||||| | ||||| || ||||| | |||||||| ||||| |||||| Sbjct: 7272 gctgcaatcattaaagcacgaaagctttcaagtgcattatctgctgctagctctgcttgt 7213 Query: 292 gatcacatccgtgactgggttctgggaacccctgagg 328 || ||||| | ||| |||||||| ||||| ||||||| Sbjct: 7212 gaccacattcatgattgggttcttggaactcctgagg 7176 Score = 52.0 bits (26), Expect = 0.001 Identities = 102/126 (80%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 12 gaccacaacagggcactcggtcagatctctgagnagacttaatgtccaagtttctgacgt 71 ||||| ||||||||||| ||||| || || ||| || | ||||||||||| || || || Sbjct: 7580 gaccataacagggcacttggtcaaatttcagag-aggttgaatgtccaagtctccgatgt 7522 Query: 72 gaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgc 131 || |||| ||||| ||||| |||||||| || | |||||| |||||||| |||||||| Sbjct: 7521 taaaaatgtgattatttgggggaatcactcatctactcagtaccctgatgtcaaccatgc 7462 Query: 132 cactgt 137 ||||| Sbjct: 7461 tactgt 7456
>emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 in linkage group 17, complete sequence Length = 174580 Score = 56.0 bits (28), Expect = 8e-05 Identities = 42/47 (89%) Strand = Plus / Plus Query: 220 cagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgc 266 ||||||| ||| |||||| |||||||||| ||||| ||||||||||| Sbjct: 1311 cagcagcgtggtgctgcagtcatcaaagccaggaaactctccagtgc 1357
>emb|AJ719442.1| Gallus gallus mRNA for hypothetical protein, clone 2g5 Length = 1322 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 70 gtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccat 129 |||||||||| || || ||||| || ||||| |||| ||||||||| |||||||||||| Sbjct: 614 gtgaagaatgtcatcatttggggcaaccactcctccactcagtatccagatgttaaccat 673 Query: 130 gc 131 || Sbjct: 674 gc 675
>ref|NM_001006395.1| Gallus gallus malate dehydrogenase 1, NAD (soluble) (MDH1), mRNA Length = 1322 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 70 gtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccat 129 |||||||||| || || ||||| || ||||| |||| ||||||||| |||||||||||| Sbjct: 614 gtgaagaatgtcatcatttggggcaaccactcctccactcagtatccagatgttaaccat 673 Query: 130 gc 131 || Sbjct: 674 gc 675
>ref|XM_681988.1| PREDICTED: Danio rerio similar to cytosolic malate dehydrogenase B (LOC572887), mRNA Length = 1558 Score = 52.0 bits (26), Expect = 0.001 Identities = 64/77 (83%) Strand = Plus / Plus Query: 190 tggctgaatggcgagttcattgccactgtccagcagcntggcgctgcaatcatcaaagcg 249 |||||||| || || |||||| | || || ||||||| || |||||| |||||||||| Sbjct: 662 tggctgaagggagaattcatttctacggtgcagcagcgaggtgctgcagtcatcaaagcc 721 Query: 250 aggaagctctccagtgc 266 ||||| ||||||||||| Sbjct: 722 aggaaactctccagtgc 738
>emb|BX932010.1| Gallus gallus finished cDNA, clone ChEST222i6 Length = 1565 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 70 gtgaagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccat 129 |||||||||| || || ||||| || ||||| |||| ||||||||| |||||||||||| Sbjct: 571 gtgaagaatgtcatcatttggggcaaccactcctccactcagtatccagatgttaaccat 630 Query: 130 gc 131 || Sbjct: 631 gc 632
>gb|BC060386.1| Xenopus laevis hypothetical protein MGC68659, mRNA (cDNA clone MGC:68659 IMAGE:4032761), complete cds Length = 1320 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 82 attatctggggtaatcactcttccagtcagtatcctgatg 121 ||||| |||||||||||||| || | |||||||||||||| Sbjct: 646 attatatggggtaatcactcatcaactcagtatcctgatg 685
>gb|AY485993.1| Pinus pinaster malate dehydrogenase (mdh) mRNA, complete cds Length = 1413 Score = 48.1 bits (24), Expect = 0.020 Identities = 51/60 (85%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||| || ||||| ||||||||||| || |||||||| || ||| |||||||| Sbjct: 554 aagaatgttataatttggggaaatcactcttcaagccagtatccagacgtttaccatgcc 613
>emb|AL929560.14| Zebrafish DNA sequence from clone CH211-241O15 in linkage group 17, complete sequence Length = 103820 Score = 48.1 bits (24), Expect = 0.020 Identities = 41/47 (87%) Strand = Plus / Minus Query: 220 cagcagcntggcgctgcaatcatcaaagcgaggaagctctccagtgc 266 ||||||| || |||||| |||||||||| ||||| ||||||||||| Sbjct: 85089 cagcagcgaggtgctgcagtcatcaaagccaggaaactctccagtgc 85043
>gb|L41699.1|PS300585E Eucalyptus globulus bicostata symbiont (F00064) mRNA, ESTun585 Length = 194 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 106 agtcagtatcctgatgttaaccatgccactgt 137 ||||||||||||||||| |||||||| ||||| Sbjct: 1 agtcagtatcctgatgtgaaccatgcaactgt 32 Score = 40.1 bits (20), Expect = 4.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 244 aaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacat 299 ||||| |||||||| || ||||| || ||||||||||| | |||||||| ||||| Sbjct: 139 aaagctaggaagctttcaagtgcactttctgctgccagtgctgcttgtgaccacat 194
>gb|DQ096990.1| Xenopus laevis brso01 mRNA, complete sequence Length = 669 Score = 46.1 bits (23), Expect = 0.077 Identities = 35/39 (89%) Strand = Plus / Plus Query: 83 ttatctggggtaatcactcttccagtcagtatcctgatg 121 |||| |||||||||||||| || | |||||||||||||| Sbjct: 6 ttatatggggtaatcactcatcaactcagtatcctgatg 44
>emb|CT033066.1| Platynereis dumerilii EST IB0AAA27BE02EM1 Length = 933 Score = 46.1 bits (23), Expect = 0.077 Identities = 41/47 (87%) Strand = Plus / Plus Query: 85 atctggggtaatcactcttccagtcagtatcctgatgttaaccatgc 131 |||||||| || |||||||| | |||||| || |||||||||||||| Sbjct: 644 atctggggcaaccactcttctactcagtaccccgatgttaaccatgc 690
>gb|AC140228.3| Mus musculus BAC clone RP24-488C4 from 10, complete sequence Length = 137705 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 259 tccagtgctctctctgctgcca 280 |||||||||||||||||||||| Sbjct: 67970 tccagtgctctctctgctgcca 67991
>gb|AY391437.1| Danio rerio malate dehydrogenase 1, NAD (soluble) (MDH1) mRNA, complete cds Length = 1361 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 tgacccgtcttgaccacaacagggc 25 |||||||||| |||||||||||||| Sbjct: 504 tgacccgtctggaccacaacagggc 528
>ref|XM_515508.1| PREDICTED: Pan troglodytes LOC459271 (LOC459271), mRNA Length = 1059 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 589 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 648 Query: 133 a 133 | Sbjct: 649 a 649
>ref|NM_005917.2| Homo sapiens malate dehydrogenase 1, NAD (soluble) (MDH1), mRNA Length = 1268 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 591 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 650 Query: 133 a 133 | Sbjct: 651 a 651
>ref|NM_199947.1| Danio rerio malate dehydrogenase 1a, NAD (soluble) (mdh1a), mRNA Length = 1403 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 tgacccgtcttgaccacaacagggc 25 |||||||||| |||||||||||||| Sbjct: 501 tgacccgtctggaccacaacagggc 525
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 tgctgccagctcagcttgtga 293 ||||||||||||||||||||| Sbjct: 593952 tgctgccagctcagcttgtga 593932
>gb|BC053158.1| Danio rerio malate dehydrogenase 1a, NAD (soluble), mRNA (cDNA clone MGC:63941 IMAGE:6791191), complete cds Length = 1403 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 tgacccgtcttgaccacaacagggc 25 |||||||||| |||||||||||||| Sbjct: 501 tgacccgtctggaccacaacagggc 525
>gb|BC001484.2| Homo sapiens malate dehydrogenase 1, NAD (soluble), mRNA (cDNA clone MGC:1375 IMAGE:3505345), complete cds Length = 1286 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 591 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 650 Query: 133 a 133 | Sbjct: 651 a 651
>ref|XM_572644.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI02140) partial mRNA Length = 6132 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 tgctgccagctcagcttgtga 293 ||||||||||||||||||||| Sbjct: 3447 tgctgccagctcagcttgtga 3427
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 tggcgctgcaatcatcaaagc 248 ||||||||||||||||||||| Sbjct: 2511248 tggcgctgcaatcatcaaagc 2511228
>emb|CR622929.1| full-length cDNA clone CS0DC020YF01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1225 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 609 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 668 Query: 133 a 133 | Sbjct: 669 a 669
>emb|CR619426.1| full-length cDNA clone CS0DI002YM05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 717 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 37 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 96 Query: 133 a 133 | Sbjct: 97 a 97
>emb|CR609240.1| full-length cDNA clone CS0DC013YO22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1257 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 602 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 661 Query: 133 a 133 | Sbjct: 662 a 662
>emb|CR606360.1| full-length cDNA clone CS0DJ015YM22 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1256 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 609 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 668 Query: 133 a 133 | Sbjct: 669 a 669
>emb|CR603513.1| full-length cDNA clone CS0DC017YG07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1233 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 584 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 643 Query: 133 a 133 | Sbjct: 644 a 644
>emb|CR598586.1| full-length cDNA clone CS0DJ013YB20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1258 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 609 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 668 Query: 133 a 133 | Sbjct: 669 a 669
>emb|CR594032.1| full-length cDNA clone CS0DB003YN14 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1231 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 584 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 643 Query: 133 a 133 | Sbjct: 644 a 644
>emb|CR457405.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0714D for gene MDH1, malate dehydrogenase 1, NAD (soluble); complete cds, incl. stopcodon Length = 1005 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 535 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 594 Query: 133 a 133 | Sbjct: 595 a 595
>dbj|D55654.1|HUMCMD Homo sapiens mRNA for cytosolic malate dehydrogenase, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 590 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 649 Query: 133 a 133 | Sbjct: 650 a 650
>gb|AC016734.7| Homo sapiens BAC clone RP11-391A7 from 2, complete sequence Length = 218836 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 141656 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 141715 Query: 133 a 133 | Sbjct: 141716 a 141716
>gb|U20352.1|HSU20352 Homo sapiens malate dehydrogenase (MDHA) mRNA, complete cds Length = 1213 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 73 aagaatgctattatctggggtaatcactcttccagtcagtatcctgatgttaaccatgcc 132 ||||||| ||||||||||| || || || || | ||||||||| ||||| ||||||||| Sbjct: 535 aagaatgtcattatctggggaaaccattcctcgactcagtatccagatgtcaaccatgcc 594 Query: 133 a 133 | Sbjct: 595 a 595
>gb|AE008571.1| Rickettsia conorii str. Malish 7, section 3 of 114 of the complete genome Length = 11078 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 aacccctgagggaacatttg 337 |||||||||||||||||||| Sbjct: 1012 aacccctgagggaacatttg 1031
>emb|AL590621.10| Human DNA sequence from clone RP11-435B17 on chromosome 6, complete sequence Length = 117411 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 acttaatgtccaagtttctgacgt 71 ||||||||| |||||||||||||| Sbjct: 28413 acttaatgttcaagtttctgacgt 28390
>emb|CR339060.11| Zebrafish DNA sequence from clone DKEY-276H21 in linkage group 23, complete sequence Length = 80855 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aaccatgccactgtgaatac 143 |||||||||||||||||||| Sbjct: 33764 aaccatgccactgtgaatac 33783
>gb|AC055713.29| Homo sapiens 12 BAC RP11-486O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118312 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 aacccctgagggaacatttg 337 |||||||||||||||||||| Sbjct: 2654 aacccctgagggaacatttg 2673
>emb|AL023592.1|SPCC550 S.pombe chromosome III cosmid c550 Length = 38475 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gttcgtgaacttgttcaaga 182 |||||||||||||||||||| Sbjct: 8796 gttcgtgaacttgttcaaga 8815
>emb|BX641152.1|HSM807171 Homo sapiens mRNA; cDNA DKFZp686I13109 (from clone DKFZp686I13109) Length = 8703 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tgctctctctgctgccagct 283 |||||||||||||||||||| Sbjct: 3694 tgctctctctgctgccagct 3713
>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains part of a novel gene, complete sequence Length = 150986 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 atcactcttccagtcagtat 114 |||||||||||||||||||| Sbjct: 54516 atcactcttccagtcagtat 54535
>gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2, complete sequence Length = 180948 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 gctctctctgctgccagctcagct 288 |||||||||||| ||||||||||| Sbjct: 93214 gctctctctgctcccagctcagct 93237
>dbj|AK131442.1| Homo sapiens cDNA FLJ16577 fis, clone TESTI2026647, weakly similar to PROBABLE ATP-DEPENDENT RNA HELICASE DDX10 Length = 1848 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 aacccctgagggaacatttg 337 |||||||||||||||||||| Sbjct: 27 aacccctgagggaacatttg 8
>ref|NM_001023088.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC550.05), partial mRNA Length = 612 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gttcgtgaacttgttcaaga 182 |||||||||||||||||||| Sbjct: 94 gttcgtgaacttgttcaaga 113
>dbj|AB208182.1| Elephas maximus DNA, AfroSINE locus Ma158 Length = 518 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 aggaagctctccagtgctct 269 |||||||||||||||||||| Sbjct: 132 aggaagctctccagtgctct 113
>dbj|AB208181.1| Loxodonta africana DNA, AfroSINE locus Ma158 Length = 518 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 aggaagctctccagtgctct 269 |||||||||||||||||||| Sbjct: 132 aggaagctctccagtgctct 113
>gb|AC048340.24| Homo sapiens 12 BAC RP11-469A24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76354 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 aacccctgagggaacatttg 337 |||||||||||||||||||| Sbjct: 8323 aacccctgagggaacatttg 8342
>gb|AC063926.36| Homo sapiens 12 BAC RP11-117L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192774 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tgctctctctgctgccagct 283 |||||||||||||||||||| Sbjct: 157437 tgctctctctgctgccagct 157456
>emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on chromosome 2, complete sequence Length = 171715 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 agcctgttcgtgaacttgtt 177 |||||||||||||||||||| Sbjct: 152500 agcctgttcgtgaacttgtt 152481
>gb|AY725475.1| Lycopersicon esculentum cytosolic malate dehydrogenase (cMDH) mRNA, complete cds Length = 1005 Score = 40.1 bits (20), Expect = 4.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 271 tctgctgccagctcagcttgtgatcacatccgtgactgggttct 314 ||||| || ||||||||||||||||| || | ||| |||||||| Sbjct: 742 tctgcagctagctcagcttgtgatcatatacatgattgggttct 785
>gb|AF075269.1|AF075269 Simian immunodeficiency virus strain SIVlhoest, complete genome Length = 9957 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tctccagtgctctctctgct 276 |||||||||||||||||||| Sbjct: 2519 tctccagtgctctctctgct 2500
>dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-158I9, complete sequence Length = 195409 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gaagctctccagtgctctctctgc 275 ||||||||||||| |||||||||| Sbjct: 130793 gaagctctccagtcctctctctgc 130816
>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete sequence Length = 178341 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gaagctctccagtgctctctctgc 275 ||||||||||||| |||||||||| Sbjct: 4855 gaagctctccagtcctctctctgc 4878 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,362,502 Number of Sequences: 3902068 Number of extensions: 2362502 Number of successful extensions: 46709 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46493 Number of HSP's gapped (non-prelim): 192 length of query: 359 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 337 effective length of database: 17,147,199,772 effective search space: 5778606323164 effective search space used: 5778606323164 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
