ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6e14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472578.1| Oryza sativa (japonica cultivar-group), predic... 418 e-114
2dbj|AK100857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-114
3gb|AY108662.1| Zea mays PCO146921 mRNA sequence 385 e-104
4emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4,... 184 2e-43
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
6emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4,... 184 2e-43
7ref|XM_506822.1| PREDICTED Oryza sativa (japonica cultivar-group... 170 2e-39
8ref|XM_466189.1| Oryza sativa (japonica cultivar-group), mRNA 170 2e-39
9dbj|AK069920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
10dbj|AK060250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 6e-37
11ref|NM_125781.2| Arabidopsis thaliana UVR8 (UVB-RESISTANCE 8) AT... 96 1e-16
12gb|BT000600.1| Arabidopsis thaliana UVB-resistance protein UVR8 ... 96 1e-16
13gb|AF130442.1| Arabidopsis thaliana chromosome V genomic sequence 96 1e-16
14gb|AF130441.1| Arabidopsis thaliana UVB-resistance protein UVR8 ... 96 1e-16
15gb|AY125497.1| Arabidopsis thaliana AT5g63860/MGI19_6 mRNA, comp... 96 1e-16
16dbj|AB007646.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 96 1e-16
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
18emb|BX831176.1|CNS0A0PB Arabidopsis thaliana Full-length cDNA Co... 92 2e-15
19dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
20gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete se... 50 0.006
21dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone... 48 0.024
22gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 42 1.5
23ref|NM_114494.1| Arabidopsis thaliana unknown protein AT3G46260 ... 40 5.8
24emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome 3, B... 40 5.8
25gb|AC127170.11| Medicago truncatula clone mth2-35d10, complete s... 40 5.8
26gb|AC006058.1| Homo sapiens 3p22-7 PAC RPCI4-555D20 (Roswell Par... 40 5.8
27emb|CR386505.1| Gallus gallus finished cDNA, clone ChEST334c13 40 5.8
28gb|AC154610.3| Mus musculus BAC clone RP23-335A11 from chromosom... 40 5.8
29emb|AL805902.5| Mouse DNA sequence from clone RP23-224M4 on chro... 40 5.8 
>ref|XM_472578.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1362

 Score =  418 bits (211), Expect = e-114
 Identities = 370/423 (87%), Gaps = 1/423 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gtcaaggcgctgcaggggatcaagnatcaagcagctagcctgtggggatagccactgcct 62
           |||||||| ||||||||||| ||| ||||||||| |||| || || |||||||| || ||
Sbjct: 367 gtcaaggccctgcaggggataaag-atcaagcagatagcttgcggcgatagccattgtct 425

                                                                       
Query: 63  ggccgtcaccatggccggtgaagtgctcagttgggggcgtaaccaaaatggccagcttgg 122
            |||||||| ||||| ||||||||||  ||||||||||| |||||||| || ||||||||
Sbjct: 426 tgccgtcactatggcaggtgaagtgcaaagttgggggcgcaaccaaaacggacagcttgg 485

                                                                       
Query: 123 tcttggaactactgaagattcgctgctcccacaaacgattcaagcttttgagggtatttc 182
           ||||||||| |||||||| ||  |||||||||||| ||||||| ||||||||||  ||| 
Sbjct: 486 tcttggaaccactgaagactcattgctcccacaaaagattcaatcttttgagggagtttg 545

                                                                       
Query: 183 tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 242
           |||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||  |
Sbjct: 546 tgtgaaaatgattgctgctggtgctgaacataccgctgcagtaactgaagatggtgacct 605

                                                                       
Query: 243 ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 302
           |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct: 606 ctatggatggggctggggtcgatatggaaacttggggcttggtgatcgcaatgatcggtt 665

                                                                       
Query: 303 tgttcctgaaaaagtatcttcggtggagggagacaagatggtgcttgttgcatgcggatg 362
            || ||||| ||||||||||| ||||||||||| |||||||||||| ||||||| |||||
Sbjct: 666 ggtacctgagaaagtatcttctgtggagggagagaagatggtgcttattgcatgtggatg 725

                                                                       
Query: 363 gcgccataccattactgtttcctnctncggtagtttgtacacttacngntggagtaaata 422
           ||||||||| ||||||||||| | ||  ||||||||||| |||||  | ||||| |||||
Sbjct: 726 gcgccatacaattactgtttcttcctctggtagtttgtatacttatggttggagcaaata 785

              
Query: 423 tgg 425
           |||
Sbjct: 786 tgg 788
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>dbj|AK100857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123M01, full
            insert sequence
          Length = 2021

 Score =  418 bits (211), Expect = e-114
 Identities = 370/423 (87%), Gaps = 1/423 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    gtcaaggcgctgcaggggatcaagnatcaagcagctagcctgtggggatagccactgcct 62
            |||||||| ||||||||||| ||| ||||||||| |||| || || |||||||| || ||
Sbjct: 710  gtcaaggccctgcaggggataaag-atcaagcagatagcttgcggcgatagccattgtct 768

                                                                        
Query: 63   ggccgtcaccatggccggtgaagtgctcagttgggggcgtaaccaaaatggccagcttgg 122
             |||||||| ||||| ||||||||||  ||||||||||| |||||||| || ||||||||
Sbjct: 769  tgccgtcactatggcaggtgaagtgcaaagttgggggcgcaaccaaaacggacagcttgg 828

                                                                        
Query: 123  tcttggaactactgaagattcgctgctcccacaaacgattcaagcttttgagggtatttc 182
            ||||||||| |||||||| ||  |||||||||||| ||||||| ||||||||||  ||| 
Sbjct: 829  tcttggaaccactgaagactcattgctcccacaaaagattcaatcttttgagggagtttg 888

                                                                        
Query: 183  tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 242
            |||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||  |
Sbjct: 889  tgtgaaaatgattgctgctggtgctgaacataccgctgcagtaactgaagatggtgacct 948

                                                                        
Query: 243  ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 302
            |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct: 949  ctatggatggggctggggtcgatatggaaacttggggcttggtgatcgcaatgatcggtt 1008

                                                                        
Query: 303  tgttcctgaaaaagtatcttcggtggagggagacaagatggtgcttgttgcatgcggatg 362
             || ||||| ||||||||||| ||||||||||| |||||||||||| ||||||| |||||
Sbjct: 1009 ggtacctgagaaagtatcttctgtggagggagagaagatggtgcttattgcatgtggatg 1068

                                                                        
Query: 363  gcgccataccattactgtttcctnctncggtagtttgtacacttacngntggagtaaata 422
            ||||||||| ||||||||||| | ||  ||||||||||| |||||  | ||||| |||||
Sbjct: 1069 gcgccatacaattactgtttcttcctctggtagtttgtatacttatggttggagcaaata 1128

               
Query: 423  tgg 425
            |||
Sbjct: 1129 tgg 1131
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>gb|AY108662.1| Zea mays PCO146921 mRNA sequence
          Length = 2037

 Score =  385 bits (194), Expect = e-104
 Identities = 370/429 (86%), Gaps = 1/429 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    gtcaaggcgctgcaggggatcaagnatcaagcagctagcctgtggggatagccactgcct 62
            |||||||||||||||||| ||||| ||||| ||| | ||||| ||||| ||||| || ||
Sbjct: 679  gtcaaggcgctgcaggggctcaag-atcaaacagattgcctgcggggacagccattgtct 737

                                                                        
Query: 63   ggccgtcaccatggccggtgaagtgctcagttgggggcgtaaccaaaatggccagcttgg 122
             ||||||||||||||||| |||||||  |||||||| ||||||||||| || ||||| ||
Sbjct: 738  tgccgtcaccatggccggagaagtgcagagttggggccgtaaccaaaacggacagctagg 797

                                                                        
Query: 123  tcttggaactactgaagattcgctgctcccacaaacgattcaagcttttgagggtatttc 182
             |||||||| |||||||| |||||||||||||||| |||||| ||||||||| || ||| 
Sbjct: 798  ccttggaaccactgaagactcgctgctcccacaaaagattcaggcttttgagagtgtttg 857

                                                                        
Query: 183  tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 242
             ||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||  |
Sbjct: 858  cgtgaaaatgattgctgccggtgccgaacatactgctgcagtaactgaagacggtgacct 917

                                                                        
Query: 243  ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 302
            ||| |||||||| |||||||||||||||||||| ||||||||||| || |||||||| ||
Sbjct: 918  ctacggatggggttggggtcgatatggaaacttaggtcttggtgaccgtaatgaccgttt 977

                                                                        
Query: 303  tgttcctgaaaaagtatcttcggtggagggagacaagatggtgcttgttgcatgcggatg 362
              ||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||
Sbjct: 978  gcttcctgaaaaagtatcttctgtggagggtgagaagatggtgcttgtggcatgtggatg 1037

                                                                        
Query: 363  gcgccataccattactgtttcctnctncggtagtttgtacacttacngntggagtaaata 422
            ||||||||| ||||| |||||   ||  |||| | ||||||||||  | ||||| |||||
Sbjct: 1038 gcgccatacaattacggtttctgactctggtaatctgtacacttatggttggagcaaata 1097

                     
Query: 423  tggncagct 431
            ||| |||||
Sbjct: 1098 tggtcagct 1106
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>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13,
              complete sequence
          Length = 127952

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                          
Query: 183    tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 242
              |||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||  |
Sbjct: 127455 tgtgaaaatgattgctgctggtgctgaacataccgctgcagtaactgaagatggtgacct 127514

                                                                          
Query: 243    ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 302
              |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct: 127515 ctatggatggggctggggtcgatatggaaacttggggcttggtgatcgcaatgatcggtt 127574

                                           
Query: 303    tgttcctgaaaaagtatcttcggtggagg 331
               || ||||| ||||||||||| |||||||
Sbjct: 127575 ggtacctgagaaagtatcttctgtggagg 127603



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                          
Query: 91     agttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgctc 150
              ||||||||||| |||||||| || ||||||||||||||||| |||||||| ||  |||||
Sbjct: 126884 agttgggggcgcaaccaaaacggacagcttggtcttggaaccactgaagactcattgctc 126943

                                       
Query: 151    ccacaaacgattcaagcttttgagg 175
              ||||||| ||||||| |||||||||
Sbjct: 126944 ccacaaaagattcaatcttttgagg 126968



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 74/86 (86%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                          
Query: 3      gtcaaggcgctgcaggggatcaagnatcaagcagctagcctgtggggatagccactgcct 62
              |||||||| ||||||||||| ||| ||||||||| |||| || || |||||||| || ||
Sbjct: 126317 gtcaaggccctgcaggggataaag-atcaagcagatagcttgcggcgatagccattgtct 126375

                                        
Query: 63     ggccgtcaccatggccggtgaagtgc 88
               |||||||| ||||| ||||||||||
Sbjct: 126376 tgccgtcactatggcaggtgaagtgc 126401
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                            
Query: 183      tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 242
                |||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||  |
Sbjct: 21692913 tgtgaaaatgattgctgctggtgctgaacataccgctgcagtaactgaagatggtgacct 21692972

                                                                            
Query: 243      ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 302
                |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct: 21692973 ctatggatggggctggggtcgatatggaaacttggggcttggtgatcgcaatgatcggtt 21693032

                                             
Query: 303      tgttcctgaaaaagtatcttcggtggagg 331
                 || ||||| ||||||||||| |||||||
Sbjct: 21693033 ggtacctgagaaagtatcttctgtggagg 21693061



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                            
Query: 329      agggagacaagatggtgcttgttgcatgcggatggcgccataccattactgtttcctnct 388
                ||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||| | ||
Sbjct: 21694169 agggagagaagatggtgcttattgcatgtggatggcgccatacaattactgtttcttcct 21694228

                                                     
Query: 389      ncggtagtttgtacacttacngntggagtaaatatgg 425
                  ||||||||||| |||||  | ||||| ||||||||
Sbjct: 21694229 ctggtagtttgtatacttatggttggagcaaatatgg 21694265



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                            
Query: 91       agttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgctc 150
                ||||||||||| |||||||| || ||||||||||||||||| |||||||| ||  |||||
Sbjct: 21692342 agttgggggcgcaaccaaaacggacagcttggtcttggaaccactgaagactcattgctc 21692401

                                         
Query: 151      ccacaaacgattcaagcttttgagg 175
                ||||||| ||||||| |||||||||
Sbjct: 21692402 ccacaaaagattcaatcttttgagg 21692426



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 74/86 (86%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 3        gtcaaggcgctgcaggggatcaagnatcaagcagctagcctgtggggatagccactgcct 62
                |||||||| ||||||||||| ||| ||||||||| |||| || || |||||||| || ||
Sbjct: 21691775 gtcaaggccctgcaggggataaag-atcaagcagatagcttgcggcgatagccattgtct 21691833

                                          
Query: 63       ggccgtcaccatggccggtgaagtgc 88
                 |||||||| ||||| ||||||||||
Sbjct: 21691834 tgccgtcactatggcaggtgaagtgc 21691859
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>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20,
            complete sequence
          Length = 141915

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                        
Query: 183  tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 242
            |||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||  |
Sbjct: 4530 tgtgaaaatgattgctgctggtgctgaacataccgctgcagtaactgaagatggtgacct 4589

                                                                        
Query: 243  ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 302
            |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct: 4590 ctatggatggggctggggtcgatatggaaacttggggcttggtgatcgcaatgatcggtt 4649

                                         
Query: 303  tgttcctgaaaaagtatcttcggtggagg 331
             || ||||| ||||||||||| |||||||
Sbjct: 4650 ggtacctgagaaagtatcttctgtggagg 4678



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                        
Query: 329  agggagacaagatggtgcttgttgcatgcggatggcgccataccattactgtttcctnct 388
            ||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||| | ||
Sbjct: 5786 agggagagaagatggtgcttattgcatgtggatggcgccatacaattactgtttcttcct 5845

                                                 
Query: 389  ncggtagtttgtacacttacngntggagtaaatatgg 425
              ||||||||||| |||||  | ||||| ||||||||
Sbjct: 5846 ctggtagtttgtatacttatggttggagcaaatatgg 5882



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                        
Query: 91   agttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgctc 150
            ||||||||||| |||||||| || ||||||||||||||||| |||||||| ||  |||||
Sbjct: 3959 agttgggggcgcaaccaaaacggacagcttggtcttggaaccactgaagactcattgctc 4018

                                     
Query: 151  ccacaaacgattcaagcttttgagg 175
            ||||||| ||||||| |||||||||
Sbjct: 4019 ccacaaaagattcaatcttttgagg 4043



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 74/86 (86%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    gtcaaggcgctgcaggggatcaagnatcaagcagctagcctgtggggatagccactgcct 62
            |||||||| ||||||||||| ||| ||||||||| |||| || || |||||||| || ||
Sbjct: 3392 gtcaaggccctgcaggggataaag-atcaagcagatagcttgcggcgatagccattgtct 3450

                                      
Query: 63   ggccgtcaccatggccggtgaagtgc 88
             |||||||| ||||| ||||||||||
Sbjct: 3451 tgccgtcactatggcaggtgaagtgc 3476
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>ref|XM_506822.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470G10.15 mRNA
          Length = 1691

 Score =  170 bits (86), Expect = 2e-39
 Identities = 279/344 (81%)
 Strand = Plus / Plus

                                                                       
Query: 52  agccactgcctggccgtcaccatggccggtgaagtgctcagttgggggcgtaaccaaaat 111
           ||||||||||| ||||||||| | |||||  | || | ||| ||||| || || ||||||
Sbjct: 464 agccactgcctcgccgtcaccgtcgccggccatgtccacagctggggacgcaatcaaaat 523

                                                                       
Query: 112 ggccagcttggtcttggaactactgaagattcgctgctcccacaaacgattcaagctttt 171
           || |||||||| || ||||  || || || ||  |||||||||||| |||||||||||||
Sbjct: 524 ggtcagcttggcctcggaaacaccgaggactccttgctcccacaaaagattcaagctttt 583

                                                                       
Query: 172 gagggtatttctgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaa 231
           |||||| |   ||| || |||||||||||||||||||| || || ||||| ||||| |||
Sbjct: 584 gagggtgtccgtgtaaaaatgattgctgctggtgccgagcacaccgctgctgtaacagaa 643

                                                                       
Query: 232 gatggcgatatctatggatggggctggggtcgatatggaaacttgggtcttggtgatcgg 291
           ||||| ||| |||| || |||||||||||||| ||||| |||||||| || || ||||| 
Sbjct: 644 gatggtgatctctacggttggggctggggtcggtatggcaacttgggactaggcgatcgc 703

                                                                       
Query: 292 aatgaccgatttgttcctgaaaaagtatcttcggtggagggagacaagatggtgcttgtt 351
            ||||||| ||  | || |||||||| ||||| ||| | ||  | |||||||||||||| 
Sbjct: 704 gatgaccgcttaatcccagaaaaagtttcttctgtgaatggtcaaaagatggtgcttgta 763

                                                       
Query: 352 gcatgcggatggcgccataccattactgtttcctnctncggtag 395
           || ||||| |||||||||||||| || || |||| || ||||||
Sbjct: 764 gcgtgcgggtggcgccataccatcaccgtgtcctcctccggtag 807
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>ref|XM_466189.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1675

 Score =  170 bits (86), Expect = 2e-39
 Identities = 279/344 (81%)
 Strand = Plus / Plus

                                                                       
Query: 52  agccactgcctggccgtcaccatggccggtgaagtgctcagttgggggcgtaaccaaaat 111
           ||||||||||| ||||||||| | |||||  | || | ||| ||||| || || ||||||
Sbjct: 465 agccactgcctcgccgtcaccgtcgccggccatgtccacagctggggacgcaatcaaaat 524

                                                                       
Query: 112 ggccagcttggtcttggaactactgaagattcgctgctcccacaaacgattcaagctttt 171
           || |||||||| || ||||  || || || ||  |||||||||||| |||||||||||||
Sbjct: 525 ggtcagcttggcctcggaaacaccgaggactccttgctcccacaaaagattcaagctttt 584

                                                                       
Query: 172 gagggtatttctgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaa 231
           |||||| |   ||| || |||||||||||||||||||| || || ||||| ||||| |||
Sbjct: 585 gagggtgtccgtgtaaaaatgattgctgctggtgccgagcacaccgctgctgtaacagaa 644

                                                                       
Query: 232 gatggcgatatctatggatggggctggggtcgatatggaaacttgggtcttggtgatcgg 291
           ||||| ||| |||| || |||||||||||||| ||||| |||||||| || || ||||| 
Sbjct: 645 gatggtgatctctacggttggggctggggtcggtatggcaacttgggactaggcgatcgc 704

                                                                       
Query: 292 aatgaccgatttgttcctgaaaaagtatcttcggtggagggagacaagatggtgcttgtt 351
            ||||||| ||  | || |||||||| ||||| ||| | ||  | |||||||||||||| 
Sbjct: 705 gatgaccgcttaatcccagaaaaagtttcttctgtgaatggtcaaaagatggtgcttgta 764

                                                       
Query: 352 gcatgcggatggcgccataccattactgtttcctnctncggtag 395
           || ||||| |||||||||||||| || || |||| || ||||||
Sbjct: 765 gcgtgcgggtggcgccataccatcaccgtgtcctcctccggtag 808
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>dbj|AK069920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039G23, full
           insert sequence
          Length = 1675

 Score =  170 bits (86), Expect = 2e-39
 Identities = 279/344 (81%)
 Strand = Plus / Plus

                                                                       
Query: 52  agccactgcctggccgtcaccatggccggtgaagtgctcagttgggggcgtaaccaaaat 111
           ||||||||||| ||||||||| | |||||  | || | ||| ||||| || || ||||||
Sbjct: 465 agccactgcctcgccgtcaccgtcgccggccatgtccacagctggggacgcaatcaaaat 524

                                                                       
Query: 112 ggccagcttggtcttggaactactgaagattcgctgctcccacaaacgattcaagctttt 171
           || |||||||| || ||||  || || || ||  |||||||||||| |||||||||||||
Sbjct: 525 ggtcagcttggcctcggaaacaccgaggactccttgctcccacaaaagattcaagctttt 584

                                                                       
Query: 172 gagggtatttctgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaa 231
           |||||| |   ||| || |||||||||||||||||||| || || ||||| ||||| |||
Sbjct: 585 gagggtgtccgtgtaaaaatgattgctgctggtgccgagcacaccgctgctgtaacagaa 644

                                                                       
Query: 232 gatggcgatatctatggatggggctggggtcgatatggaaacttgggtcttggtgatcgg 291
           ||||| ||| |||| || |||||||||||||| ||||| |||||||| || || ||||| 
Sbjct: 645 gatggtgatctctacggttggggctggggtcggtatggcaacttgggactaggcgatcgc 704

                                                                       
Query: 292 aatgaccgatttgttcctgaaaaagtatcttcggtggagggagacaagatggtgcttgtt 351
            ||||||| ||  | || |||||||| ||||| ||| | ||  | |||||||||||||| 
Sbjct: 705 gatgaccgcttaatcccagaaaaagtttcttctgtgaatggtcaaaagatggtgcttgta 764

                                                       
Query: 352 gcatgcggatggcgccataccattactgtttcctnctncggtag 395
           || ||||| |||||||||||||| || || |||| || ||||||
Sbjct: 765 gcgtgcgggtggcgccataccatcaccgtgtcctcctccggtag 808
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>dbj|AK060250.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-B02, full
           insert sequence
          Length = 1691

 Score =  163 bits (82), Expect = 6e-37
 Identities = 278/344 (80%)
 Strand = Plus / Plus

                                                                       
Query: 52  agccactgcctggccgtcaccatggccggtgaagtgctcagttgggggcgtaaccaaaat 111
           ||||||||||| ||||||||| | |||||  | || | ||| ||||| || || ||||||
Sbjct: 464 agccactgcctcgccgtcaccgtcgccggccatgtccacagctggggacgcaatcaaaat 523

                                                                       
Query: 112 ggccagcttggtcttggaactactgaagattcgctgctcccacaaacgattcaagctttt 171
           || |||||||| || ||||  || || || ||  |||||||||||| |||||||||||||
Sbjct: 524 ggtcagcttggcctcggaaacaccgaggactccttgctcccacaaaagattcaagctttt 583

                                                                       
Query: 172 gagggtatttctgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaa 231
           |||||| |   ||| || |||||||||||||||||||| || || ||||| ||||| |||
Sbjct: 584 gagggtgtccgtgtaaaaatgattgctgctggtgccgagcacaccgctgctgtaacagaa 643

                                                                       
Query: 232 gatggcgatatctatggatggggctggggtcgatatggaaacttgggtcttggtgatcgg 291
           ||||| ||| |||| || |||||||||||||| ||||| |||||||| || || ||||| 
Sbjct: 644 gatggtgatctctacggttggggctggggtcggtatggcaacttgggactaggcgatcgc 703

                                                                       
Query: 292 aatgaccgatttgttcctgaaaaagtatcttcggtggagggagacaagatggtgcttgtt 351
            ||||||| ||  | || ||||| || ||||| ||| | ||  | |||||||||||||| 
Sbjct: 704 gatgaccgcttaatcccagaaaaggtttcttccgtgaatggtcaaaagatggtgcttgta 763

                                                       
Query: 352 gcatgcggatggcgccataccattactgtttcctnctncggtag 395
           || ||||| |||||||||||||| || || |||| || ||||||
Sbjct: 764 gcgtgcgggtggcgccataccatcaccgtgtcctcctccggtag 807
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>ref|NM_125781.2| Arabidopsis thaliana UVR8 (UVB-RESISTANCE 8) AT5G63860 (UVR8) mRNA,
           complete cds
          Length = 1801

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                       
Query: 194 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 253
           ||||||||||||| ||||| ||||||||||| || |||||||| ||  ||||||||||||
Sbjct: 695 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 754

                                                                       
Query: 254 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 313
           |||||||  |||| ||||| |||||  | ||||| |||| |||||| || ||||||||||
Sbjct: 755 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 814
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>gb|BT000600.1| Arabidopsis thaliana UVB-resistance protein UVR8
           (At5g63860/MGI19_6) mRNA, complete cds
          Length = 1323

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                       
Query: 194 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 253
           ||||||||||||| ||||| ||||||||||| || |||||||| ||  ||||||||||||
Sbjct: 530 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 589

                                                                       
Query: 254 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 313
           |||||||  |||| ||||| |||||  | ||||| |||| |||||| || ||||||||||
Sbjct: 590 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 649
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>gb|AF130442.1| Arabidopsis thaliana chromosome V genomic sequence
          Length = 21845

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                        
Query: 194  ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 253
            ||||||||||||| ||||| ||||||||||| || |||||||| ||  ||||||||||||
Sbjct: 7593 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 7534

                                                                        
Query: 254  gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 313
            |||||||  |||| ||||| |||||  | ||||| |||| |||||| || ||||||||||
Sbjct: 7533 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 7474
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>gb|AF130441.1| Arabidopsis thaliana UVB-resistance protein UVR8 (UVR8) mRNA,
           complete cds
          Length = 1818

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                       
Query: 194 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 253
           ||||||||||||| ||||| ||||||||||| || |||||||| ||  ||||||||||||
Sbjct: 695 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 754

                                                                       
Query: 254 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 313
           |||||||  |||| ||||| |||||  | ||||| |||| |||||| || ||||||||||
Sbjct: 755 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 814
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>gb|AY125497.1| Arabidopsis thaliana AT5g63860/MGI19_6 mRNA, complete cds
          Length = 3155

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                       
Query: 194 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 253
           ||||||||||||| ||||| ||||||||||| || |||||||| ||  ||||||||||||
Sbjct: 613 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 672

                                                                       
Query: 254 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 313
           |||||||  |||| ||||| |||||  | ||||| |||| |||||| || ||||||||||
Sbjct: 673 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 732
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>dbj|AB007646.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGI19
          Length = 37225

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                         
Query: 194   ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 253
             ||||||||||||| ||||| ||||||||||| || |||||||| ||  ||||||||||||
Sbjct: 20425 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 20366

                                                                         
Query: 254   gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 313
             |||||||  |||| ||||| |||||  | ||||| |||| |||||| || ||||||||||
Sbjct: 20365 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 20306
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                            
Query: 190      atgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatgga 249
                |||||||||||||||||||| || || ||||| ||||| |||||||| ||| |||| || 
Sbjct: 20935557 atgattgctgctggtgccgagcacaccgctgctgtaacagaagatggtgatctctacggt 20935616

                                                                  
Query: 250      tggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccg 299
                |||||||||||||| ||||| |||||||| || || |||||  |||||||
Sbjct: 20935617 tggggctggggtcggtatggcaacttgggactaggcgatcgcgatgaccg 20935666



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                           
Query: 337      aagatggtgcttgttgcatgcggatggcgccataccattactgtttcctnctncggtag 395
                |||||||||||||| || ||||| |||||||||||||| || || |||| || ||||||
Sbjct: 20935954 aagatggtgcttgtagcgtgcgggtggcgccataccatcaccgtgtcctcctccggtag 20936012



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                            
Query: 89       tcagttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgc 148
                |||| ||||| || || |||||||| |||||||| || ||||  || || || ||  |||
Sbjct: 20934679 tcagctggggacgcaatcaaaatggtcagcttggcctcggaaacaccgaggactccttgc 20934738

                                           
Query: 149      tcccacaaacgattcaagcttttgagg 175
                ||||||||| |||||||||||||||||
Sbjct: 20934739 tcccacaaaagattcaagcttttgagg 20934765
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>emb|BX831176.1|CNS0A0PB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS65ZC03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1581

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 100/118 (84%)
 Strand = Plus / Plus

                                                                       
Query: 194 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 253
           ||||||||||||| ||||| ||||||||||| || |||||||| ||  ||||||||||||
Sbjct: 544 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 603

                                                                     
Query: 254 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctga 311
           |||||||  |||| ||||| |||||  | ||||| |||| |||||| || ||||||||
Sbjct: 604 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctga 661
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470G10
          Length = 145419

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                         
Query: 190   atgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatgga 249
             |||||||||||||||||||| || || ||||| ||||| |||||||| ||| |||| || 
Sbjct: 59029 atgattgctgctggtgccgagcacaccgctgctgtaacagaagatggtgatctctacggt 59088

                                                               
Query: 250   tggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccg 299
             |||||||||||||| ||||| |||||||| || || |||||  |||||||
Sbjct: 59089 tggggctggggtcggtatggcaacttgggactaggcgatcgcgatgaccg 59138



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 337   aagatggtgcttgttgcatgcggatggcgccataccattactgtttcctnctncggtag 395
             |||||||||||||| || ||||| |||||||||||||| || || |||| || ||||||
Sbjct: 59426 aagatggtgcttgtagcgtgcgggtggcgccataccatcaccgtgtcctcctccggtag 59484



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                         
Query: 89    tcagttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgc 148
             |||| ||||| || || |||||||| |||||||| || ||||  || || || ||  |||
Sbjct: 58151 tcagctggggacgcaatcaaaatggtcagcttggcctcggaaacaccgaggactccttgc 58210

                                        
Query: 149   tcccacaaacgattcaagcttttgagg 175
             ||||||||| |||||||||||||||||
Sbjct: 58211 tcccacaaaagattcaagcttttgagg 58237
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>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                         
Query: 194   ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 253
             ||||||||||||| ||||||| ||  ||  | |||||| |||| ||  | || |||||||
Sbjct: 34715 ttgctgctggtgctgaacatagtgtggccatcactgaaaatggagagctgtacggatggg 34774

                                      
Query: 254   gctggggtcgatatggaaacttggg 278
             | ||||| |||||||||||||||||
Sbjct: 34775 gttggggacgatatggaaacttggg 34799
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>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a,
             complete sequence
          Length = 62624

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                         
Query: 244   tatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgattt 303
             ||||||||||| |||||  ||||||||||||||||  | || ||||| ||||| || |  
Sbjct: 42137 tatggatggggttggggcagatatggaaacttgggattgggagatcgaaatgatcgctgg 42078

                                 
Query: 304   gttcctgaaaaagtatcttc 323
              ||||||||||||| |||||
Sbjct: 42077 attcctgaaaaagtttcttc 42058
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 219     tgcagtaactgaagatggcga 239
               |||||||||||||||||||||
Sbjct: 2704040 tgcagtaactgaagatggcga 2704060
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>ref|NM_114494.1| Arabidopsis thaliana unknown protein AT3G46260 mRNA, complete cds
          Length = 1305

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 gatatctatggatggggctg 257
           ||||||||||||||||||||
Sbjct: 720 gatatctatggatggggctg 701
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>emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12M12
          Length = 106730

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   gatatctatggatggggctg 257
             ||||||||||||||||||||
Sbjct: 83952 gatatctatggatggggctg 83971
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>gb|AC127170.11| Medicago truncatula clone mth2-35d10, complete sequence
          Length = 114143

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 150    cccacaaacgattcaagcttttga 173
              ||||||| ||||||||||||||||
Sbjct: 111460 cccacaagcgattcaagcttttga 111483
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>gb|AC006058.1| Homo sapiens 3p22-7 PAC RPCI4-555D20 (Roswell Park Cancer Institute Human
              PAC Library) complete sequence
          Length = 147146

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    atttgttcctgaaaaagtat 319
              ||||||||||||||||||||
Sbjct: 107637 atttgttcctgaaaaagtat 107618
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>emb|CR386505.1| Gallus gallus finished cDNA, clone ChEST334c13
          Length = 1211

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 227 ctgaagatggcgatatctatggat 250
           |||||| |||||||||||||||||
Sbjct: 887 ctgaaggtggcgatatctatggat 910
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>gb|AC154610.3| Mus musculus BAC clone RP23-335A11 from chromosome 13, complete
             sequence
          Length = 201893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   gcttttgagggtatttctgt 185
             ||||||||||||||||||||
Sbjct: 32688 gcttttgagggtatttctgt 32707
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>emb|AL805902.5| Mouse DNA sequence from clone RP23-224M4 on chromosome X, complete
             sequence
          Length = 75376

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aggcgctgcaggggatcaag 26
             ||||||||||||||||||||
Sbjct: 16344 aggcgctgcaggggatcaag 16325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,110,839
Number of Sequences: 3902068
Number of extensions: 3110839
Number of successful extensions: 62879
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62739
Number of HSP's gapped (non-prelim): 127
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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