ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5p06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018700.1| Zea mays clone EL01N0515A01.d mRNA sequence 80 8e-12
2gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
5gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, comp... 46 0.11
6gb|AC020593.6| Homo sapiens BAC clone RP11-317G22 from 4, comple... 46 0.11
7gb|AC093557.4| Homo sapiens chromosome 3 clone RP11-56P22, compl... 46 0.11
8gb|AC110222.9| Mus musculus chromosome 3, clone RP24-211P23, com... 44 0.44
9gb|U42439.2| Caenorhabditis elegans cosmid F19C7, complete sequence 44 0.44
10gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, c... 44 0.44
11gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, com... 44 0.44
12emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Enceph... 44 0.44
13dbj|AK084280.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 44 0.44
14gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, co... 42 1.7
15gb|AF440091.1| Sceloporus horridus tRNA-Phe gene, partial sequen... 42 1.7
16gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, comp... 42 1.7
17gb|AC123600.18| Mus musculus chromosome 7, clone RP23-62J11, com... 42 1.7
18gb|AC112947.8| Mus musculus chromosome 8, clone RP23-375F22, com... 42 1.7
19dbj|AK107345.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
20gb|AC158367.3| Gallus gallus BAC clone CH261-50N13 from chromoso... 42 1.7
21gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete... 40 6.9
22gb|AC154051.2| Drosophila melanogaster clone BACR17E02, complete... 40 6.9
23gb|DQ141111.1| Drosophila yakuba Dscam gene, partial sequence 40 6.9
24gb|DQ141109.1| Drosophila simulans Dscam gene, partial sequence 40 6.9
25gb|AE014835.1| Plasmodium falciparum 3D7 chromosome 10 section 7... 40 6.9
26gb|AC069309.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.9
27gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome... 40 6.9
28gb|AC129213.4| Mus musculus BAC clone RP24-391M2 from chromosome... 40 6.9
29gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.9
30emb|BX537147.1| Human DNA sequence from clone RP1-201D17 on chro... 40 6.9
31gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1... 40 6.9
32emb|AL161655.8| Human DNA sequence from clone RP11-116E13 on chr... 40 6.9
33emb|AL023805.2|HS811H13 Human DNA sequence from clone RP4-811H13... 40 6.9
34gb|AE008827.1| Salmonella typhimurium LT2, section 131 of 220 of... 40 6.9
35emb|CR382401.1| Plasmodium falciparum chromosome 6, complete seq... 40 6.9
36emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 40 6.9
37gb|AC164650.3| Mus musculus BAC clone RP23-47A4 from chromosome ... 40 6.9
38emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 6.9
39emb|AL645990.14| Mouse DNA sequence from clone RP23-403C12 on ch... 40 6.9
40gb|AC109335.5| Homo sapiens chromosome 8, clone RP11-453N18, com... 40 6.9
41gb|DQ317106.1| Drosophila yakuba Dscam gene, exons 3 through 24 40 6.9
42gb|AE008520.1|AE008520 Streptococcus pneumoniae R6 section 136 o... 40 6.9
43gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Canc... 40 6.9
44gb|AF020810.2|AF020810 Salmonella enterica VirK (virK), Mig-14 (... 40 6.9
45gb|AC007372.4|AC007372 Homo sapiens chromosome 14 BAC containing... 40 6.9
46emb|BX511212.10| Zebrafish DNA sequence from clone CH211-127A14 ... 40 6.9
47gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 6.9
48emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-9... 40 6.9
49gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 ... 40 6.9
50gb|AF068901.1|AF068901 Streptococcus pneumoniae penicillin-bindi... 40 6.9
51gb|AC167016.5| Mus musculus chromosome 3, clone RP23-76C12, comp... 40 6.9
52gb|AF029846.1| Salmonella typhi TctD and TctE genes, complete cds 40 6.9
53gb|AC124759.4| Mus musculus BAC clone RP23-132N7 from 1, complet... 40 6.9
54emb|AL020990.1|HS201D17 Human DNA sequence from clone RP1-201D17... 40 6.9 
>gb|BT018700.1| Zea mays clone EL01N0515A01.d mRNA sequence
          Length = 1400

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 115/140 (82%)
 Strand = Plus / Plus

                                                                       
Query: 222 tgcaagtagcagaagggacaaggaaaatcaagacaaactggatacccgtatctttgattt 281
           ||||| |||||| ||| |||||  |||||||||||| ||  ||||   ||| ||||| ||
Sbjct: 266 tgcaactagcaggaggaacaagacaaatcaagacaagctaaatactgatatttttgaatt 325

                                                                       
Query: 282 atacatggaggacctttggaagcgtacagatgaagatcagaagaatgcttacgcatattt 341
           ||||||||| || ||||||||||  |  ||||||||| |||||| |||||| ||||| ||
Sbjct: 326 atacatggaagatctttggaagcacattgatgaagataagaagagtgcttatgcatactt 385

                               
Query: 342 ggatccgttatggtttaaca 361
           |||| | |||||||||||||
Sbjct: 386 ggattctttatggtttaaca 405



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 423 aatattttcaaggaaatatgtgtttgtccctattgntctttggggacattggaacctcct 482
           ||||||||||||  ||||||| ||||| ||||||| |  ||  ||||| |||| ||||||
Sbjct: 461 aatattttcaagacaatatgtttttgttcctattgtttgttttggacactggagcctcct 520

                            
Query: 483 tgtcctatgccactttg 499
           |||| ||||||||||||
Sbjct: 521 tgtcttatgccactttg 537
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>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034O04, complete sequence
          Length = 164882

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 464   ggggacattggaacctccttgtcctatgccactttgatgagac 506
             ||||||| ||||||||||||||| ||||| |||||| ||||||
Sbjct: 55645 ggggacactggaacctccttgtcttatgcaactttggtgagac 55603
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                          
Query: 464     ggggacattggaacctccttgtcctatgccactttgatgagac 506
               ||||||| ||||||||||||||| ||||| |||||| ||||||
Sbjct: 5845761 ggggacactggaacctccttgtcttatgcaactttggtgagac 5845719
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                          
Query: 464     ggggacattggaacctccttgtcctatgccactttgatgagac 506
               ||||||| ||||||||||||||| ||||| |||||| ||||||
Sbjct: 5912238 ggggacactggaacctccttgtcttatgcaactttggtgagac 5912196
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>gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, complete sequence
          Length = 166745

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 422  aaatattttcaaggaaatatgtg 444
            |||||||||||||||||||||||
Sbjct: 4347 aaatattttcaaggaaatatgtg 4369
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>gb|AC020593.6| Homo sapiens BAC clone RP11-317G22 from 4, complete sequence
          Length = 184206

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 412   aagaaactgaaaatattttcaag 434
             |||||||||||||||||||||||
Sbjct: 47792 aagaaactgaaaatattttcaag 47770
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>gb|AC093557.4| Homo sapiens chromosome 3 clone RP11-56P22, complete sequence
          Length = 149941

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 422   aaatattttcaaggaaatatgtg 444
             |||||||||||||||||||||||
Sbjct: 44210 aaatattttcaaggaaatatgtg 44188
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>gb|AC110222.9| Mus musculus chromosome 3, clone RP24-211P23, complete sequence
          Length = 179958

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 416  aactgaaaatattttcaaggaaatat 441
            ||||||||||||| ||||||||||||
Sbjct: 5909 aactgaaaatattgtcaaggaaatat 5884
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>gb|U42439.2| Caenorhabditis elegans cosmid F19C7, complete sequence
          Length = 29712

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 412   aagaaactgaaaatattttcaa 433
             ||||||||||||||||||||||
Sbjct: 10402 aagaaactgaaaatattttcaa 10381
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>gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, complete sequence
          Length = 213513

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 412    aagaaactgaaaatattttcaa 433
              ||||||||||||||||||||||
Sbjct: 127634 aagaaactgaaaatattttcaa 127613
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>gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, complete sequence
          Length = 181930

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 416   aactgaaaatattttcaaggaaatat 441
             ||||||||||||| ||||||||||||
Sbjct: 32645 aactgaaaatattgtcaaggaaatat 32670
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>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 226576

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 131    tcgacctcgacgaagaggatga 152
              ||||||||||||||||||||||
Sbjct: 186383 tcgacctcgacgaagaggatga 186362
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>dbj|AK084280.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230017H06
           product:unclassifiable, full insert sequence
          Length = 2090

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 416 aactgaaaatattttcaaggaaatat 441
           ||||||||||||| ||||||||||||
Sbjct: 531 aactgaaaatattgtcaaggaaatat 556
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>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence
          Length = 176607

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 411   aaagaaactgaaaatattttcaaggaaat 439
             |||||||| ||||||||||||||| ||||
Sbjct: 77964 aaagaaacagaaaatattttcaagaaaat 77936
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>gb|AF440091.1| Sceloporus horridus tRNA-Phe gene, partial sequence; 12S ribosomal
            RNA gene, complete sequence; tRNA-Val gene, complete
            sequence; 16S ribosomal RNA gene, complete sequence;
            tRNA-Leu gene, complete sequence; NADH dehydrogenase
            subunit 1 gene, complete cds; tRNA-Ile and tRNA-Gln
            genes, complete sequence; and tRNA-Met gene, partial
            sequence; mitochondrial genes for mitochondrial products
          Length = 3692

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 353  ggtttaacagttatgtcaatg 373
            |||||||||||||||||||||
Sbjct: 1743 ggtttaacagttatgtcaatg 1723
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>gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, complete sequence
          Length = 180302

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 411   aaagaaactgaaaatattttcaaggaaat 439
             |||||||| ||||||||||||||| ||||
Sbjct: 32534 aaagaaacagaaaatattttcaagaaaat 32562
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>gb|AC123600.18| Mus musculus chromosome 7, clone RP23-62J11, complete sequence
          Length = 182830

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 411    aaagaaactgaaaatattttcaaggaaat 439
              |||||||| ||||||||||||||| ||||
Sbjct: 119445 aaagaaacagaaaatattttcaagaaaat 119473
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>gb|AC112947.8| Mus musculus chromosome 8, clone RP23-375F22, complete sequence
          Length = 191154

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 420   gaaaatattttcaaggaaata 440
             |||||||||||||||||||||
Sbjct: 82316 gaaaatattttcaaggaaata 82296
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>dbj|AK107345.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-G08, full
           insert sequence
          Length = 1395

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  ctcgccgtcgtcgccatgccc 105
           |||||||||||||||||||||
Sbjct: 123 ctcgccgtcgtcgccatgccc 103
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>gb|AC158367.3| Gallus gallus BAC clone CH261-50N13 from chromosome unknown, complete
             sequence
          Length = 230079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 382   gaacagaaatcaagaattctt 402
             |||||||||||||||||||||
Sbjct: 38967 gaacagaaatcaagaattctt 38947
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>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence
          Length = 186002

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    aaactgaaaatattttcaag 434
              ||||||||||||||||||||
Sbjct: 121271 aaactgaaaatattttcaag 121290
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>gb|AC154051.2| Drosophila melanogaster clone BACR17E02, complete sequence
          Length = 168158

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   aaactgaaaatattttcaag 434
             ||||||||||||||||||||
Sbjct: 49851 aaactgaaaatattttcaag 49870
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>gb|DQ141111.1| Drosophila yakuba Dscam gene, partial sequence
          Length = 56981

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   gacaaagaaactgaaaatat 427
             ||||||||||||||||||||
Sbjct: 50998 gacaaagaaactgaaaatat 51017
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>gb|DQ141109.1| Drosophila simulans Dscam gene, partial sequence
          Length = 45053

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   gacaaagaaactgaaaatat 427
             ||||||||||||||||||||
Sbjct: 42735 gacaaagaaactgaaaatat 42754
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>gb|AE014835.1| Plasmodium falciparum 3D7 chromosome 10 section 7 of 7 of the complete
             sequence
          Length = 180450

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 422   aaatattttcaaggaaatatgtgt 445
             ||||||||||| ||||||||||||
Sbjct: 77787 aaatattttcatggaaatatgtgt 77810
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>gb|AC069309.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-154D15, complete
             sequence
          Length = 174754

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tatctttgatttatacatgg 289
             ||||||||||||||||||||
Sbjct: 15822 tatctttgatttatacatgg 15841
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>gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome 9, complete sequence
          Length = 245088

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    tgaaaatattttcaaggaaa 438
              ||||||||||||||||||||
Sbjct: 189423 tgaaaatattttcaaggaaa 189442
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>gb|AC129213.4| Mus musculus BAC clone RP24-391M2 from chromosome 6, complete sequence
          Length = 154613

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    tatctttgatttatacatgg 289
              ||||||||||||||||||||
Sbjct: 106697 tatctttgatttatacatgg 106716
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>gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-132J21, complete
              sequence
          Length = 200910

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    tatctttgatttatacatgg 289
              ||||||||||||||||||||
Sbjct: 196262 tatctttgatttatacatgg 196281
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>emb|BX537147.1| Human DNA sequence from clone RP1-201D17 on chromosome Xp11.4
            Contains part of the MAOA gene for monoamine oxidase A,
            complete sequence
          Length = 7772

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 411  aaagaaactgaaaatattttcaag 434
            |||||||||||||||||| |||||
Sbjct: 1774 aaagaaactgaaaatattatcaag 1751
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>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete
             sequence
          Length = 250743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 422   aaatattttcaaggaaatatgtgt 445
             ||||||||||| ||||||||||||
Sbjct: 93038 aaatattttcatggaaatatgtgt 93015
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>emb|AL161655.8| Human DNA sequence from clone RP11-116E13 on chromosome 20 Contains
             part of a novel gene, GSSs and STSs, complete sequence
          Length = 105191

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 415   aaactgaaaatattttcaaggaaatatg 442
             |||||||||||||||| |||||| ||||
Sbjct: 22558 aaactgaaaatattttaaaggaattatg 22585
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>emb|AL023805.2|HS811H13 Human DNA sequence from clone RP4-811H13 on chromosome 20p12 Contains
              part of the PLCB4 gene for phospholipase C beta 4 and a CpG
              island, complete sequence
          Length = 137779

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    gaaaatattttcaaggaaat 439
              ||||||||||||||||||||
Sbjct: 125127 gaaaatattttcaaggaaat 125108
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>gb|AE008827.1| Salmonella typhimurium LT2, section 131 of 220 of the complete genome
          Length = 20396

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  gtttaacagttatgtcaatg 373
            ||||||||||||||||||||
Sbjct: 7004 gtttaacagttatgtcaatg 6985
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>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5
          Length = 337203

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 422    aaatattttcaaggaaatatgtgt 445
              ||||||||||| ||||||||||||
Sbjct: 266287 aaatattttcatggaaatatgtgt 266310
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>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 422   aaatattttcaaggaaatatgtgt 445
             ||||||||||| ||||||||||||
Sbjct: 54842 aaatattttcatggaaatatgtgt 54819
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>gb|AC164650.3| Mus musculus BAC clone RP23-47A4 from chromosome 1, complete sequence
          Length = 200598

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    agaaactgaaaatattttca 432
              ||||||||||||||||||||
Sbjct: 152776 agaaactgaaaatattttca 152795
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>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 12/20
          Length = 274050

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gtttaacagttatgtcaatg 373
             ||||||||||||||||||||
Sbjct: 84751 gtttaacagttatgtcaatg 84732
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>emb|AL645990.14| Mouse DNA sequence from clone RP23-403C12 on chromosome 11 Contains a
             novel gene and the 5' end of the Mmd gene for monocyte to
             macrophage differentiation-associated, complete sequence
          Length = 134303

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   tgaaaatattttcaaggaaa 438
             ||||||||||||||||||||
Sbjct: 63931 tgaaaatattttcaaggaaa 63950
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>gb|AC109335.5| Homo sapiens chromosome 8, clone RP11-453N18, complete sequence
          Length = 174591

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   gaacagaaatcaagaattct 401
             ||||||||||||||||||||
Sbjct: 44798 gaacagaaatcaagaattct 44817
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>gb|DQ317106.1| Drosophila yakuba Dscam gene, exons 3 through 24
          Length = 60717

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   gacaaagaaactgaaaatat 427
             ||||||||||||||||||||
Sbjct: 51745 gacaaagaaactgaaaatat 51764
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>gb|AE008520.1|AE008520 Streptococcus pneumoniae R6 section 136 of 184 of the complete genome
          Length = 10579

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 416  aactgaaaatattttcaaggaaat 439
            ||||||||||||| ||||||||||
Sbjct: 1229 aactgaaaatattctcaaggaaat 1206
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>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214029

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   aaaatattttcaaggaaata 440
             ||||||||||||||||||||
Sbjct: 79740 aaaatattttcaaggaaata 79721
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>gb|AF020810.2|AF020810 Salmonella enterica VirK (virK), Mig-14 (mig-14), NxiA (nxiA), TctE
            (tctE), TctD (tctD), TctC (tctC), TctB (tctB), and TctA
            (tctA) genes, complete cds; and O360 (o360) gene, partial
            cds
          Length = 10313

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  gtttaacagttatgtcaatg 373
            ||||||||||||||||||||
Sbjct: 5281 gtttaacagttatgtcaatg 5262
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>gb|AC007372.4|AC007372 Homo sapiens chromosome 14 BAC containing gene for type 2 iodothyronine
             deiodinase (DIO2) gene, complete CDS, complete sequence
          Length = 154796

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   aaatattttcaaggaaatat 441
             ||||||||||||||||||||
Sbjct: 87725 aaatattttcaaggaaatat 87744
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>emb|BX511212.10| Zebrafish DNA sequence from clone CH211-127A14 in linkage group 19,
             complete sequence
          Length = 178832

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ttcttagatggacaaagaaa 417
             ||||||||||||||||||||
Sbjct: 39647 ttcttagatggacaaagaaa 39628
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 354     gtttaacagttatgtcaatg 373
               ||||||||||||||||||||
Sbjct: 2772608 gtttaacagttatgtcaatg 2772589
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>emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-959A22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168677

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   aaatattttcaaggaaatat 441
             ||||||||||||||||||||
Sbjct: 87427 aaatattttcaaggaaatat 87408
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>gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 of 74 of the complete
             sequence
          Length = 203546

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   aaactgaaaatattttcaag 434
             ||||||||||||||||||||
Sbjct: 58658 aaactgaaaatattttcaag 58639
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>gb|AF068901.1|AF068901 Streptococcus pneumoniae penicillin-binding protein 2b (pbp2b), RecM
            (recM), D-Ala-D-Ala ligase (ddl), D-Ala-D-Ala adding
            enzyme (murF), MutT (mutT), cell division protein FtsA
            (ftsA), cell division protein FtsZ (ftsZ), YlmE (ylmE),
            YlmF (ylmF), YlmG (ylmG), YlmH (ylmH), cell division
            protein DivIVA (divIVA), and isoleucine-tRNA synthetase
            (ileS) genes, complete cds; and unknown gene
          Length = 15870

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 416  aactgaaaatattttcaaggaaat 439
            ||||||||||||| ||||||||||
Sbjct: 5704 aactgaaaatattctcaaggaaat 5727
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>gb|AC167016.5| Mus musculus chromosome 3, clone RP23-76C12, complete sequence
          Length = 225524

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   caaagaaactgaaaatattttcaa 433
             ||||||||| ||||||||||||||
Sbjct: 74120 caaagaaacagaaaatattttcaa 74143
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>gb|AF029846.1| Salmonella typhi TctD and TctE genes, complete cds
          Length = 3413

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 gtttaacagttatgtcaatg 373
           ||||||||||||||||||||
Sbjct: 913 gtttaacagttatgtcaatg 932
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>gb|AC124759.4| Mus musculus BAC clone RP23-132N7 from 1, complete sequence
          Length = 200104

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    agaaactgaaaatattttca 432
              ||||||||||||||||||||
Sbjct: 107781 agaaactgaaaatattttca 107800
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>emb|AL020990.1|HS201D17 Human DNA sequence from clone RP1-201D17 on chromosome Xp11.4, complete
             sequence
          Length = 99342

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 411   aaagaaactgaaaatattttcaag 434
             |||||||||||||||||| |||||
Sbjct: 97569 aaagaaactgaaaatattatcaag 97592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,462,249
Number of Sequences: 3902068
Number of extensions: 4462249
Number of successful extensions: 122466
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122228
Number of HSP's gapped (non-prelim): 237
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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