ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5p05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475119.1| Oryza sativa (japonica cultivar-group), predic... 311 1e-81
2dbj|AK100115.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 1e-81
3gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
4gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
6ref|NM_184007.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
8dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10dbj|AK100444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
11dbj|AK099063.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
12dbj|AK062168.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
13emb|AL161793.9| Human DNA sequence from clone RP11-23I7 on chrom... 44 0.47
14gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, comple... 44 0.47
15gb|AC098817.3| Homo sapiens BAC clone RP11-92A1 from 2, complete... 44 0.47
16emb|AL121787.22|HSDJ512E2 Human DNA sequence from clone RP3-512E... 42 1.9
17gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete ... 42 1.9
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
19dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
21gb|AY109470.1| Zea mays CL2102_5 mRNA sequence 42 1.9
22gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, co... 42 1.9
23gb|AE010310.1| Methanopyrus kandleri AV19 section 9 of 157 of th... 40 7.4
24ref|XM_868921.1| PREDICTED: Bos taurus similar to Cyclin H (MO15... 40 7.4
25gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
26gb|AC140426.3| Mus musculus BAC clone RP24-98A17 from chromosome... 40 7.4
27gb|AC161930.7| Mus musculus chromosome 7, clone RP23-157P17, com... 40 7.4
28gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosom... 40 7.4
29gb|AC149293.21| Medicago truncatula clone mth2-78c5, complete se... 40 7.4
30gb|AC147780.10| Medicago truncatula clone mth2-36n9, complete se... 40 7.4
31emb|AL390857.7| Human DNA sequence from clone RP11-51N22 on chro... 40 7.4
32emb|BX927153.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 7.4
33gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome... 40 7.4
34emb|CR749725.1| Homo sapiens genomic DNA; cDNA DKFZp434E1235 (fr... 40 7.4
35gb|AC129907.3| Homo sapiens chromosome 15, clone CTD-2280M1, com... 40 7.4
36gb|BC103224.1| Bos taurus cDNA clone MGC:128571 IMAGE:7985459, c... 40 7.4
37gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 7.4
38gb|AC140725.3| Homo sapiens chromosome 15, clone, complete sequence 40 7.4
39dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
40dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 7.4
41gb|AC107977.13| Homo sapiens chromosome 15, clone CTD-2611K5, co... 40 7.4
42dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
43gb|AC102861.12| Mus musculus chromosome 7, clone RP24-532A16, co... 40 7.4
44emb|AL391152.3|CNS06C7Y Human chromosome 14 DNA sequence BAC R-6... 40 7.4
45emb|AL137100.4|CNS01DWC Human chromosome 14 DNA sequence BAC R-1... 40 7.4
46gb|AC006212.1|AC006212 Homo sapiens, clone hRPK.14_A_1, complete... 40 7.4
47dbj|AP001524.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.4
48dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.4
49gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosom... 40 7.4
50emb|AL954140.7| Mouse DNA sequence from clone RP23-52I15 on chro... 40 7.4
51emb|AL772167.13| Mouse DNA sequence from clone RP23-203A12 on ch... 40 7.4 
>ref|XM_475119.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2175

 Score =  311 bits (157), Expect = 1e-81
 Identities = 382/457 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgtgatagcaaaatttggaatgccgatgggaccttttcgattagctgatcttgtaggtt 60
            |||||||  |||| ||||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 1568 atgtgattacaaagtttggaatgccaatgggacctttccgattagctgatcttgttggtt 1627

                                                                        
Query: 61   ttggcgttgccgttgccactggaaagcaatattatcagagttatccagagcgatgttata 120
            |||| |||||  ||||| |  |||||||||||   || |||||||| ||||||||||| |
Sbjct: 1628 ttggagttgctattgcctccagaaagcaatatctccaaagttatcctgagcgatgttaca 1687

                                                                        
Query: 121  aatcgcatcttactgaaattatgctcaaggagaacagaacaggtgaatcttctcgtaggg 180
            | ||    |||| | ||||||||||  |||| ||||| |||||||||||||| || |  |
Sbjct: 1688 agtcaatgcttattcaaattatgcttgaggaaaacaggacaggtgaatcttcacgcaaag 1747

                                                                        
Query: 181  gcttttatctttatgatgataagcgagaagcttctccagatcctgatatcaaaaagtatg 240
            | |||||||||||||||||||||||| | ||||||||||||||||| || || |||||  
Sbjct: 1748 gattttatctttatgatgataagcgaaaggcttctccagatcctgaaatgaacaagtaca 1807

                                                                        
Query: 241  ttgagaattcaagaaacatggcaggtgttgcacaagatcctaagctgctgaaattaacag 300
            ||||||| ||||||| ||||||  || ||| ||||||||||||||||| |||||||||||
Sbjct: 1808 ttgagaaatcaagaagcatggctagtattgtacaagatcctaagctgccgaaattaacag 1867

                                                                        
Query: 301  acaaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttg 360
            |  | || || || |||||| |  |||| || ||||||||||||||||| ||| ||||||
Sbjct: 1868 atgatgaaatcgtggagatgatgctcttccccgtggtgaatgaggcctgtcgactgcttg 1927

                                                                        
Query: 361  atgagggaattgctttgaaagcatctgacctcgatgtagcatccattatgggaatgggat 420
            | |||||  ||||| ||||||||||||| || |||||||||||||||||||| | ||| |
Sbjct: 1928 acgagggggttgctatgaaagcatctgatcttgatgtagcatccattatggggaggggct 1987

                                                 
Query: 421  tcccttcttttaggggtggagtgatgttttgggccga 457
            ||||||| |  ||||| ||||||||||| ||||||||
Sbjct: 1988 tcccttcctacaggggcggagtgatgttctgggccga 2024
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>dbj|AK100115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006O04, full
            insert sequence
          Length = 2501

 Score =  311 bits (157), Expect = 1e-81
 Identities = 382/457 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgtgatagcaaaatttggaatgccgatgggaccttttcgattagctgatcttgtaggtt 60
            |||||||  |||| ||||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 1672 atgtgattacaaagtttggaatgccaatgggacctttccgattagctgatcttgttggtt 1731

                                                                        
Query: 61   ttggcgttgccgttgccactggaaagcaatattatcagagttatccagagcgatgttata 120
            |||| |||||  ||||| |  |||||||||||   || |||||||| ||||||||||| |
Sbjct: 1732 ttggagttgctattgcctccagaaagcaatatctccaaagttatcctgagcgatgttaca 1791

                                                                        
Query: 121  aatcgcatcttactgaaattatgctcaaggagaacagaacaggtgaatcttctcgtaggg 180
            | ||    |||| | ||||||||||  |||| ||||| |||||||||||||| || |  |
Sbjct: 1792 agtcaatgcttattcaaattatgcttgaggaaaacaggacaggtgaatcttcacgcaaag 1851

                                                                        
Query: 181  gcttttatctttatgatgataagcgagaagcttctccagatcctgatatcaaaaagtatg 240
            | |||||||||||||||||||||||| | ||||||||||||||||| || || |||||  
Sbjct: 1852 gattttatctttatgatgataagcgaaaggcttctccagatcctgaaatgaacaagtaca 1911

                                                                        
Query: 241  ttgagaattcaagaaacatggcaggtgttgcacaagatcctaagctgctgaaattaacag 300
            ||||||| ||||||| ||||||  || ||| ||||||||||||||||| |||||||||||
Sbjct: 1912 ttgagaaatcaagaagcatggctagtattgtacaagatcctaagctgccgaaattaacag 1971

                                                                        
Query: 301  acaaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttg 360
            |  | || || || |||||| |  |||| || ||||||||||||||||| ||| ||||||
Sbjct: 1972 atgatgaaatcgtggagatgatgctcttccccgtggtgaatgaggcctgtcgactgcttg 2031

                                                                        
Query: 361  atgagggaattgctttgaaagcatctgacctcgatgtagcatccattatgggaatgggat 420
            | |||||  ||||| ||||||||||||| || |||||||||||||||||||| | ||| |
Sbjct: 2032 acgagggggttgctatgaaagcatctgatcttgatgtagcatccattatggggaggggct 2091

                                                 
Query: 421  tcccttcttttaggggtggagtgatgttttgggccga 457
            ||||||| |  ||||| ||||||||||| ||||||||
Sbjct: 2092 tcccttcctacaggggcggagtgatgttctgggccga 2128
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>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
             complete sequence
          Length = 164064

 Score =  105 bits (53), Expect = 2e-19
 Identities = 122/145 (84%)
 Strand = Plus / Plus

                                                                         
Query: 283   agctgctgaaattaacagacaaggacattgtagagatggtcttctttcctgtggtgaatg 342
             |||||| ||||||||||||  | || || || |||||| |  |||| || ||||||||||
Sbjct: 95435 agctgccgaaattaacagatgatgaaatcgtggagatgatgctcttccccgtggtgaatg 95494

                                                                         
Query: 343   aggcctgccgagtgcttgatgagggaattgctttgaaagcatctgacctcgatgtagcat 402
             ||||||| ||| ||||||| |||||  ||||| ||||||||||||| || ||||||||||
Sbjct: 95495 aggcctgtcgactgcttgacgagggggttgctatgaaagcatctgatcttgatgtagcat 95554

                                      
Query: 403   ccattatgggaatgggattcccttc 427
             |||||||||| | ||| ||||||||
Sbjct: 95555 ccattatggggaggggcttcccttc 95579



 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                         
Query: 160   caggtgaatcttctcgtaggggcttttatctttatgatgataagcgagaagcttctccag 219
             ||||||||||||| || |  || |||||||||||||||||||||||| | ||||||||||
Sbjct: 94788 caggtgaatcttcacgcaaaggattttatctttatgatgataagcgaaaggcttctccag 94847

                                                                         
Query: 220   atcctgatatcaaaaagtatgttgagaattcaagaaacatggcaggtgttgcacaagatc 279
             ||||||| || || |||||  ||||||| ||||||| ||||||  || ||| ||||||||
Sbjct: 94848 atcctgaaatgaacaagtacattgagaaatcaagaagcatggctagtattgtacaagatc 94907

                  
Query: 280   ctaag 284
             |||||
Sbjct: 94908 ctaag 94912



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                         
Query: 40    gattagctgatcttgtaggttttggcgttgccgttgccactggaaagcaatattatcaga 99
             |||||||||||||||| |||||||| |||||  ||||| |  |||||||||||   || |
Sbjct: 94553 gattagctgatcttgttggttttggagttgctattgcctccagaaagcaatatctccaaa 94612

                                
Query: 100   gttatccagagcgatgtta 118
             ||||||| |||||||||||
Sbjct: 94613 gttatcctgagcgatgtta 94631



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 1     atgtgatagcaaaatttggaatgccgatgggaccttt 37
             |||||||  |||| ||||||||||| |||||||||||
Sbjct: 93627 atgtgattacaaagtttggaatgccaatgggaccttt 93663
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>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10,
              complete sequence
          Length = 148373

 Score =  105 bits (53), Expect = 2e-19
 Identities = 122/145 (84%)
 Strand = Plus / Plus

                                                                          
Query: 283    agctgctgaaattaacagacaaggacattgtagagatggtcttctttcctgtggtgaatg 342
              |||||| ||||||||||||  | || || || |||||| |  |||| || ||||||||||
Sbjct: 144667 agctgccgaaattaacagatgatgaaatcgtggagatgatgctcttccccgtggtgaatg 144726

                                                                          
Query: 343    aggcctgccgagtgcttgatgagggaattgctttgaaagcatctgacctcgatgtagcat 402
              ||||||| ||| ||||||| |||||  ||||| ||||||||||||| || ||||||||||
Sbjct: 144727 aggcctgtcgactgcttgacgagggggttgctatgaaagcatctgatcttgatgtagcat 144786

                                       
Query: 403    ccattatgggaatgggattcccttc 427
              |||||||||| | ||| ||||||||
Sbjct: 144787 ccattatggggaggggcttcccttc 144811



 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                          
Query: 160    caggtgaatcttctcgtaggggcttttatctttatgatgataagcgagaagcttctccag 219
              ||||||||||||| || |  || |||||||||||||||||||||||| | ||||||||||
Sbjct: 144020 caggtgaatcttcacgcaaaggattttatctttatgatgataagcgaaaggcttctccag 144079

                                                                          
Query: 220    atcctgatatcaaaaagtatgttgagaattcaagaaacatggcaggtgttgcacaagatc 279
              ||||||| || || |||||  ||||||| ||||||| ||||||  || ||| ||||||||
Sbjct: 144080 atcctgaaatgaacaagtacattgagaaatcaagaagcatggctagtattgtacaagatc 144139

                   
Query: 280    ctaag 284
              |||||
Sbjct: 144140 ctaag 144144



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                          
Query: 40     gattagctgatcttgtaggttttggcgttgccgttgccactggaaagcaatattatcaga 99
              |||||||||||||||| |||||||| |||||  ||||| |  |||||||||||   || |
Sbjct: 143785 gattagctgatcttgttggttttggagttgctattgcctccagaaagcaatatctccaaa 143844

                                 
Query: 100    gttatccagagcgatgtta 118
              ||||||| |||||||||||
Sbjct: 143845 gttatcctgagcgatgtta 143863



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 1      atgtgatagcaaaatttggaatgccgatgggaccttt 37
              |||||||  |||| ||||||||||| |||||||||||
Sbjct: 142859 atgtgattacaaagtttggaatgccaatgggaccttt 142895
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 2e-19
 Identities = 122/145 (84%)
 Strand = Plus / Plus

                                                                            
Query: 283      agctgctgaaattaacagacaaggacattgtagagatggtcttctttcctgtggtgaatg 342
                |||||| ||||||||||||  | || || || |||||| |  |||| || ||||||||||
Sbjct: 17151300 agctgccgaaattaacagatgatgaaatcgtggagatgatgctcttccccgtggtgaatg 17151359

                                                                            
Query: 343      aggcctgccgagtgcttgatgagggaattgctttgaaagcatctgacctcgatgtagcat 402
                ||||||| ||| ||||||| |||||  ||||| ||||||||||||| || ||||||||||
Sbjct: 17151360 aggcctgtcgactgcttgacgagggggttgctatgaaagcatctgatcttgatgtagcat 17151419

                                         
Query: 403      ccattatgggaatgggattcccttc 427
                |||||||||| | ||| ||||||||
Sbjct: 17151420 ccattatggggaggggcttcccttc 17151444



 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                            
Query: 160      caggtgaatcttctcgtaggggcttttatctttatgatgataagcgagaagcttctccag 219
                ||||||||||||| || |  || |||||||||||||||||||||||| | ||||||||||
Sbjct: 17150653 caggtgaatcttcacgcaaaggattttatctttatgatgataagcgaaaggcttctccag 17150712

                                                                            
Query: 220      atcctgatatcaaaaagtatgttgagaattcaagaaacatggcaggtgttgcacaagatc 279
                ||||||| || || |||||  ||||||| ||||||| ||||||  || ||| ||||||||
Sbjct: 17150713 atcctgaaatgaacaagtacattgagaaatcaagaagcatggctagtattgtacaagatc 17150772

                     
Query: 280      ctaag 284
                |||||
Sbjct: 17150773 ctaag 17150777



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                            
Query: 40       gattagctgatcttgtaggttttggcgttgccgttgccactggaaagcaatattatcaga 99
                |||||||||||||||| |||||||| |||||  ||||| |  |||||||||||   || |
Sbjct: 17150418 gattagctgatcttgttggttttggagttgctattgcctccagaaagcaatatctccaaa 17150477

                                   
Query: 100      gttatccagagcgatgtta 118
                ||||||| |||||||||||
Sbjct: 17150478 gttatcctgagcgatgtta 17150496



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 1        atgtgatagcaaaatttggaatgccgatgggaccttt 37
                |||||||  |||| ||||||||||| |||||||||||
Sbjct: 17149492 atgtgattacaaagtttggaatgccaatgggaccttt 17149528
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>ref|NM_184007.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2184

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 303  aaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttgat 362
            |||||||| || |||||||||||||| || ||  | |||||||| ||||| || ||||||
Sbjct: 1879 aaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgat 1938

                       
Query: 363  gagggaattgc 373
            |||||||||||
Sbjct: 1939 gagggaattgc 1949
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                            
Query: 303      aaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttgat 362
                |||||||| || |||||||||||||| || ||  | |||||||| ||||| || ||||||
Sbjct: 13875129 aaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgat 13875188

                           
Query: 363      gagggaattgc 373
                |||||||||||
Sbjct: 13875189 gagggaattgc 13875199
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>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1051E10
          Length = 207782

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 303   aaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttgat 362
             |||||||| || |||||||||||||| || ||  | |||||||| ||||| || ||||||
Sbjct: 35431 aaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgat 35490

                        
Query: 363   gagggaattgc 373
             |||||||||||
Sbjct: 35491 gagggaattgc 35501
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0440D10
          Length = 144340

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                          
Query: 303    aaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttgat 362
              |||||||| || |||||||||||||| || ||  | |||||||| ||||| || ||||||
Sbjct: 112532 aaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgat 112591

                         
Query: 363    gagggaattgc 373
              |||||||||||
Sbjct: 112592 gagggaattgc 112602
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>dbj|AK100444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090D07, full
            insert sequence
          Length = 2677

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 303  aaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttgat 362
            |||||||| || |||||||||||||| || ||  | |||||||| ||||| || ||||||
Sbjct: 2095 aaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgat 2154

                       
Query: 363  gagggaattgc 373
            |||||||||||
Sbjct: 2155 gagggaattgc 2165
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>dbj|AK099063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157A11, full
           insert sequence
          Length = 941

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 303 aaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttgat 362
           |||||||| || |||||||||||||| || ||  | |||||||| ||||| || ||||||
Sbjct: 321 aaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgat 380

                      
Query: 363 gagggaattgc 373
           |||||||||||
Sbjct: 381 gagggaattgc 391
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>dbj|AK062168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B11, full
           insert sequence
          Length = 1148

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 303 aaggacattgtagagatggtcttctttcctgtggtgaatgaggcctgccgagtgcttgat 362
           |||||||| || |||||||||||||| || ||  | |||||||| ||||| || ||||||
Sbjct: 563 aaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgat 622

                      
Query: 363 gagggaattgc 373
           |||||||||||
Sbjct: 623 gagggaattgc 633
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>emb|AL161793.9| Human DNA sequence from clone RP11-23I7 on chromosome 1q32.1-32.3
              Contains the 5' end of the LRRN5 gene for leucine rich
              repeat neuronal 5 and a novel gene, complete sequence
          Length = 162345

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 433    ggggtggagtgatgttttgggc 454
              ||||||||||||||||||||||
Sbjct: 144842 ggggtggagtgatgttttgggc 144821
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>gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, complete sequence
          Length = 170467

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 433   ggggtggagtgatgttttgggc 454
             ||||||||||||||||||||||
Sbjct: 47220 ggggtggagtgatgttttgggc 47199
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>gb|AC098817.3| Homo sapiens BAC clone RP11-92A1 from 2, complete sequence
          Length = 154436

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 291   aaattaacagacaaggacattgtaga 316
             |||||||| |||||||||||||||||
Sbjct: 48795 aaattaactgacaaggacattgtaga 48770
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>emb|AL121787.22|HSDJ512E2 Human DNA sequence from clone RP3-512E2 on chromosome 6q14.3-16.1
             Contains part of the BACH2 gene for BTB and CNC homology 1
             basic leucine zipper transcription factor 2 and a novel
             gene, complete sequence
          Length = 106556

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   aattaacagacaaggacattg 312
             |||||||||||||||||||||
Sbjct: 30425 aattaacagacaaggacattg 30445
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>gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete sequence
          Length = 116158

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 420   ttcccttcttttaggggtgga 440
             |||||||||||||||||||||
Sbjct: 62111 ttcccttcttttaggggtgga 62091
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 505      aggattatggagagttcttca 525
                |||||||||||||||||||||
Sbjct: 15929951 aggattatggagagttcttca 15929931
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>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0027N13
          Length = 179669

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 505    aggattatggagagttcttca 525
              |||||||||||||||||||||
Sbjct: 169465 aggattatggagagttcttca 169445
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>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0040K22
          Length = 155832

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 505   aggattatggagagttcttca 525
             |||||||||||||||||||||
Sbjct: 11353 aggattatggagagttcttca 11333
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>gb|AY109470.1| Zea mays CL2102_5 mRNA sequence
          Length = 1160

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 339 aatgaggcctgccgagtgcttgatgaggg 367
           ||||| ||||||||||| |||||||||||
Sbjct: 399 aatgaagcctgccgagtccttgatgaggg 371
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>gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, complete sequence
          Length = 185278

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   gaaattaacagacaaggacat 310
             |||||||||||||||||||||
Sbjct: 98247 gaaattaacagacaaggacat 98267
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>gb|AE010310.1| Methanopyrus kandleri AV19 section 9 of 157 of the complete genome
          Length = 11629

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 513 ggagagttcttcaaaccctgtgaa 536
           |||||||||||||||| |||||||
Sbjct: 358 ggagagttcttcaaactctgtgaa 381
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>ref|XM_868921.1| PREDICTED: Bos taurus similar to Cyclin H (MO15-associated protein)
           (p37) (p34) (LOC513399), partial mRNA
          Length = 701

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 atgctcaaggagaacagaac 160
           ||||||||||||||||||||
Sbjct: 591 atgctcaaggagaacagaac 610
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>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0031H05, complete sequence
          Length = 141200

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   cttttatctttatgatgata 201
             ||||||||||||||||||||
Sbjct: 50433 cttttatctttatgatgata 50452
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>gb|AC140426.3| Mus musculus BAC clone RP24-98A17 from chromosome 14, complete sequence
          Length = 189282

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    ggagagttcttcaaaccctg 532
              ||||||||||||||||||||
Sbjct: 145528 ggagagttcttcaaaccctg 145547
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>gb|AC161930.7| Mus musculus chromosome 7, clone RP23-157P17, complete sequence
          Length = 212109

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   agacaaggacattgtagaga 318
             ||||||||||||||||||||
Sbjct: 61543 agacaaggacattgtagaga 61524
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>gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosome 14, complete
             sequence
          Length = 180645

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   ggagagttcttcaaaccctg 532
             ||||||||||||||||||||
Sbjct: 22859 ggagagttcttcaaaccctg 22878
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>gb|AC149293.21| Medicago truncatula clone mth2-78c5, complete sequence
          Length = 111412

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   cttttatctttatgatgata 201
             ||||||||||||||||||||
Sbjct: 97289 cttttatctttatgatgata 97308
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>gb|AC147780.10| Medicago truncatula clone mth2-36n9, complete sequence
          Length = 102831

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   cttttatctttatgatgata 201
             ||||||||||||||||||||
Sbjct: 60726 cttttatctttatgatgata 60745
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>emb|AL390857.7| Human DNA sequence from clone RP11-51N22 on chromosome 13 Contains a
             heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
             pseudogene and a novel pseudogene (KIAA1935 FLJ31359),
             complete sequence
          Length = 154273

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   aaattatgctcaaggagaac 155
             ||||||||||||||||||||
Sbjct: 77469 aaattatgctcaaggagaac 77450
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>emb|BX927153.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 6/10
          Length = 349584

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    tgataagcgagaagcttctccaga 220
              |||||||| |||||||||||||||
Sbjct: 319491 tgataagccagaagcttctccaga 319468
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>gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome 13, complete sequence
          Length = 206249

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    agaattcaagaaacatggca 263
              ||||||||||||||||||||
Sbjct: 200279 agaattcaagaaacatggca 200298
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>emb|CR749725.1| Homo sapiens genomic DNA; cDNA DKFZp434E1235 (from clone
           DKFZp434E1235)
          Length = 872

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 291 aaattaacagacaaggacattgta 314
           ||||||||||| ||||||||||||
Sbjct: 87  aaattaacagataaggacattgta 110
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>gb|AC129907.3| Homo sapiens chromosome 15, clone CTD-2280M1, complete sequence
          Length = 127340

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  cctgtggtgaatgaggcctg 349
            ||||||||||||||||||||
Sbjct: 8396 cctgtggtgaatgaggcctg 8415
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>gb|BC103224.1| Bos taurus cDNA clone MGC:128571 IMAGE:7985459, complete cds
          Length = 1200

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 atgctcaaggagaacagaac 160
           ||||||||||||||||||||
Sbjct: 839 atgctcaaggagaacagaac 858
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      cgttgccgttgccactggaa 84
               ||||||||||||||||||||
Sbjct: 1330720 cgttgccgttgccactggaa 1330701
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>gb|AC140725.3| Homo sapiens chromosome 15, clone, complete sequence
          Length = 181240

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    cctgtggtgaatgaggcctg 349
              ||||||||||||||||||||
Sbjct: 140005 cctgtggtgaatgaggcctg 139986
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 182      cttttatctttatgatgata 201
                ||||||||||||||||||||
Sbjct: 21593807 cttttatctttatgatgata 21593826
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 197     tgataagcgagaagcttctccaga 220
               |||||||| |||||||||||||||
Sbjct: 2094882 tgataagccagaagcttctccaga 2094859
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>gb|AC107977.13| Homo sapiens chromosome 15, clone CTD-2611K5, complete sequence
          Length = 152619

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cctgtggtgaatgaggcctg 349
             ||||||||||||||||||||
Sbjct: 52679 cctgtggtgaatgaggcctg 52660
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>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1228_C03, complete sequence
          Length = 31468

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  cttttatctttatgatgata 201
            ||||||||||||||||||||
Sbjct: 2131 cttttatctttatgatgata 2150
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>gb|AC102861.12| Mus musculus chromosome 7, clone RP24-532A16, complete sequence
          Length = 162039

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  agacaaggacattgtagaga 318
            ||||||||||||||||||||
Sbjct: 9200 agacaaggacattgtagaga 9219
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>emb|AL391152.3|CNS06C7Y Human chromosome 14 DNA sequence BAC R-613G13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 189385

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    aattaacagacaaggacatt 311
              ||||||||||||||||||||
Sbjct: 185627 aattaacagacaaggacatt 185646
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>emb|AL137100.4|CNS01DWC Human chromosome 14 DNA sequence BAC R-108M12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166486

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    aattaacagacaaggacatt 311
              ||||||||||||||||||||
Sbjct: 108882 aattaacagacaaggacatt 108863
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>gb|AC006212.1|AC006212 Homo sapiens, clone hRPK.14_A_1, complete sequence
          Length = 157772

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atgtgatagcaaaatttgga 20
             ||||||||||||||||||||
Sbjct: 95450 atgtgatagcaaaatttgga 95469
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>dbj|AP001524.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-702P11, complete
             sequence
          Length = 150847

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   tgaaattaacagacaaggac 308
             ||||||||||||||||||||
Sbjct: 21970 tgaaattaacagacaaggac 21989
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>dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-728D14, complete
              sequence
          Length = 192926

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    tgaaattaacagacaaggac 308
              ||||||||||||||||||||
Sbjct: 132455 tgaaattaacagacaaggac 132474
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>gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosome 13, complete
             sequence
          Length = 181988

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   agaattcaagaaacatggca 263
             ||||||||||||||||||||
Sbjct: 93260 agaattcaagaaacatggca 93279
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>emb|AL954140.7| Mouse DNA sequence from clone RP23-52I15 on chromosome 4, complete
             sequence
          Length = 98087

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   aagcttctccagatcctgat 227
             ||||||||||||||||||||
Sbjct: 59733 aagcttctccagatcctgat 59714
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>emb|AL772167.13| Mouse DNA sequence from clone RP23-203A12 on chromosome 4, complete
              sequence
          Length = 205104

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    tcaaggagaacagaacaggt 164
              ||||||||||||||||||||
Sbjct: 175860 tcaaggagaacagaacaggt 175879


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,035,432
Number of Sequences: 3902068
Number of extensions: 5035432
Number of successful extensions: 88174
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87943
Number of HSP's gapped (non-prelim): 224
length of query: 547
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 524
effective length of database: 17,143,297,704
effective search space: 8983087996896
effective search space used: 8983087996896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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